RPSBLAST alignment for GI: 254780945 and conserved domain: KOG0330

>gnl|CDD|35551 KOG0330, KOG0330, KOG0330, ATP-dependent RNA helicase [RNA processing and modification]. Length = 476
 Score = 53.8 bits (129), Expect = 2e-07
 Identities = 74/412 (17%), Positives = 149/412 (36%), Gaps = 42/412 (10%)

Query: 273 PTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVEAGGQ---AVIMAP 329
           PTK Q  AI   L       R +  L  + GSGKT    + +   +    +   A+++ P
Sbjct: 84  PTKIQSEAIPVALG-----GRDVIGL-AETGSGKTGAFALPILQRLLQEPKLFFALVLTP 137

Query: 330 IGILAQQHYEFIKKYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGT------H 383
              LAQQ  E  +       + V ++ G M    +   L +    + HI++ T      H
Sbjct: 138 TRELAQQIAEQFEALGSGIGLRVAVLVGGMDMMLQANQLSK----KPHILVATPGRLWDH 193

Query: 384 ALFQDSIQYYKLILVIVDEQHRFGVQQRLKLTQKATAPHVLLMTATPIPRTLVLTSLGDI 443
                     +L  +++DE  R       +           ++   P  R   L S    
Sbjct: 194 LENTKGFSLEQLKFLVLDEADRLLDMDFEEELDY-------ILKVIPRERQTFLFSATMT 246

Query: 444 DISKITEKPAGRKPIKTVIIPINRI-DEVIERLKVVLSEGKKAYWICPQIEEKKESNF-- 500
              +  ++ +   P+K  +    +  D + +    V  + K  Y +   + E   ++   
Sbjct: 247 KKVRKLQRASLDNPVKVAVSSKYQTVDHLKQTYLFVPGKDKDTYLV-YLLNELAGNSVIV 305

Query: 501 ---RSVVERFNS--LHEHFTSSIAIIHGRMSDIDKESVMDSFKNGTCKLLIATTVIEVGI 555
                   RF +  L      +I  +HG+MS   +   ++ FK G   +L+ T V   G+
Sbjct: 306 FCNTCNTTRFLALLLRNLGFQAIP-LHGQMSQSKRLGALNKFKAGARSILVCTDVASRGL 364

Query: 556 DVVDASIIIIENAEHFGLAQLHQL--RGRVGRGEEISSCILLYHPPL----SKNSYTRLS 609
           D+    +++  +        +H++    R GR  +  + +  Y   L          +L 
Sbjct: 365 DIPHVDVVVNYDIPTHSKDYIHRVGRTARAGRSGKAITLVTQYDVELVQRIEHALGKKLP 424

Query: 610 VLKNTEDGFLIAEEDLKQRKEGEILGIKQSGMPKFLIAQPELHDSLLEIARK 661
             K  ++  +   E + + ++   + +K+ G  K    Q +  D  ++   +
Sbjct: 425 EYKVDKNEVMSLNERVAEAQKEAGMEMKELGKRKGKRPQGDAFDEEMDGGER 476