RPSBLAST alignment for GI: 254780945 and conserved domain: KOG0350
>gnl|CDD|35571 KOG0350, KOG0350, KOG0350, DEAD-box ATP-dependent RNA helicase [RNA processing and modification]. Length = 620
Score = 51.6 bits (123), Expect = 8e-07
Identities = 59/350 (16%), Positives = 109/350 (31%), Gaps = 63/350 (18%)
Query: 303 GSGKTLVALIAMAAAVEAGG----QAVIMAPIGILAQQHYEFIKKYTQNTQIIVEIITGN 358
GSGKTL +I + + + +AV++ P LA Q Y+ K+ T + V ++G
Sbjct: 193 GSGKTLAYVIPIVQLLSSRPVKRLRAVVIVPTRELALQVYDTFKRLNSGTGLAVCSLSGQ 252
Query: 359 MPQAHRRKALERIAHG-QAHIIIGTHALFQD------SIQYYKLILVIVDEQHRFGVQQR 411
+ L + I++ T D S L +++DE R
Sbjct: 253 NSLEDEARQLASDPPECRIDILVATPGRLVDHLNNTKSFDLKHLRFLVIDEADRL----- 307
Query: 412 LKLTQKATAPHVLLMTATPIPRTL-----------VLTSLGDIDISKITEKPAGRKPIKT 460
L + + V+ + T T L ++ P K + +
Sbjct: 308 LDQSFQEWLDTVMSLCKTMKRVACLDNIIRQRQAPQPTVLSELLTKLGKLYPPLWKLVFS 367
Query: 461 VII-----PINRIDEVIERLKVVLSEGKKAYWICPQIEEKK------------------- 496
+ + + I RL V Y + + +
Sbjct: 368 ATLSQDPSKLKDLTLHIPRLFHVSKPLIGRYSLPSSLSHRLVVTEPKFKPLAVYALITSN 427
Query: 497 -------ESNFRSVVER----FNSLHEHFTSSIAIIHGRMSDIDKESVMDSFKNGTCKLL 545
N S R ++ G+++ + +++ F G +L
Sbjct: 428 KLNRTLCFVNSVSSANRLAHVLKVEFCSDNFKVSEFTGQLNGKRRYKMLEKFAKGDINVL 487
Query: 546 IATTVIEVGIDVVDASIIIIENAEHFGLAQLHQLRGRVGRGEEISSCILL 595
I + + GIDV D +I + +H+ GR R + I L
Sbjct: 488 ICSDALARGIDVNDVDNVINYDPPASDKTYVHRA-GRTARAGQDGYAITL 536