HHSEARCH alignment of GI: 254780946 and SCOP domain: d1puza_

Alignment

Probab=99.92  E-value=9.4e-26  Score=166.99  Aligned_cols=81  Identities=31%  Similarity=0.457  Sum_probs=78.1

Q ss_pred             CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             98658999999999997407899999999999998202999999999999468917999999488999806756999999
Q gi|254780946|r    1 MKKNMNLQCRKIVYRCWRRGTREMDLILGSFVDHFILELSSVELTMLESIIEEDDSNLFKWFTGMEKPPEYLRTPIFKKI   80 (98)
Q Consensus         1 M~~~ld~~~krl~~Rs~rRG~kElDllL~~F~~~~~~~l~~~el~~f~~LL~~~D~dL~~wl~~~~~~p~~~~~~ii~~I   80 (98)
                      ||..-|.++|||+||| ||||+|+|+|||+|+++++++++++++.+|+.||+++|+|||+|++|+++||+...++|+++|
T Consensus         1 m~~~~d~~~krl~~r~-rRG~kElDllL~~F~~~~~~~l~~~el~~f~~lL~~~D~dL~~wl~g~~~~p~~~~~~ii~~I   79 (82)
T d1puza_           1 MMVFDDIAKRKIRFQT-RRGLLELDLIFGRFMEKEFEHLSDKELSEFSEILEFQDQELLALINGHSETDKGHLIPMLEKI   79 (82)
T ss_dssp             CCCCCHHHHHHHHHHS-CCSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHTSCHHHHHHHHHTCSCCSCTTHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHH
T ss_conf             9755288998999983-035299999999999999987999999999999839859999999189999929899999998


Q ss_pred             HH
Q ss_conf             99
Q gi|254780946|r   81 YD   82 (98)
Q Consensus        81 ~~   82 (98)
                      +.
T Consensus        80 rk   81 (82)
T d1puza_          80 RR   81 (82)
T ss_dssp             HH
T ss_pred             HC
T ss_conf             71

SCOP domain information

class: All alpha proteins
fold: YgfY-like
superfamily: YgfY-like
family: YgfY-like
domain: Hypothetical protein NMA1147
species: Neisseria meningitidis, mc58 [TaxId: 487]