HHsearch alignment for GI: 254780947 and conserved domain: COG1110

Probab=99.16  E-value=1.3e-08  Score=85.02  Aligned_cols=90  Identities=19%  Similarity=0.234  Sum_probs=55.3

Q ss_pred             ECCCCCCHHHHHHHH-HHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCCC-HHCCCCCHHHHHHHHHHHH
Q ss_conf             803765227999999-98629989999299899999999999857998099857224670-1004899899999999999
Q gi|254780947|r   20 LSPVIDGTEGFILAE-IARLGLSLVYICSDERILINLKKILTLVVPDIRVIIFPAWDCLP-YDRVSPSPYVVTRRLSCIS   97 (1187)
Q Consensus        20 l~Gl~gs~~allla~-l~~~~rpilvI~~d~~~A~~l~~dL~~f~~~~~V~~FP~~E~LP-Yd~~sp~~di~~eRl~~L~   97 (1187)
T Consensus       105 PTGvGKTTfg~~~sl~~a~kgkr~yii~PT~~Lv~Q~~~kl~~~~e~~~-----~~~~~~~yh~~l~~----~ekee~le  175 (1187)
T COG1110         105 PTGVGKTTFGLLMSLYLAKKGKRVYIIVPTTTLVRQVYERLKKFAEDAG-----SLDVLVVYHSALPT----KEKEEALE  175 (1187)
T ss_pred             CCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCC-----CCCEEEEECCCCCH----HHHHHHHH
T ss_conf             7887654799999999875587499996678999999999999886537-----85246653123665----77999999


Q ss_pred             HHHHCCCCCCCEEEEECHHHHHCCC
Q ss_conf             9841244688769995667852369
Q gi|254780947|r   98 NLVSFNSSKETIIVLTTVSAVMCRS  122 (1187)
Q Consensus        98 ~L~~~~~~~~~~IIVtt~~ALlqkl  122 (1187)
T Consensus       176 ~i~----~gdfdIlitTs~FL~k~~  196 (1187)
T COG1110         176 RIE----SGDFDILITTSQFLSKRF  196 (1187)
T ss_pred             HHH----CCCCCEEEEEHHHHHHHH
T ss_conf             986----599639997478788669