HHsearch alignment for GI: 254780947 and conserved domain: COG1200
>COG1200 RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription].
Probab=100.00 E-value=0 Score=920.77 Aligned_cols=413 Identities=38% Similarity=0.623 Sum_probs=387.9
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCC
Q ss_conf 99999887401567787846789899848888874489999999876059885414431665432489999999875112
Q gi|254780947|r 594 VDIAAKRAIHSVPPLMVSQDLYSQFIKRFPHVETEDQEKAIDAVIQDLSSGRLMDRLICGDVGFGKTEIALRAAFIAVMN 673 (1187)
Q Consensus 594 l~lyA~R~~~~g~~f~~d~~~~~eFe~~FpyeET~DQ~~AI~eV~~Dmes~~PMDRLiCGDVGfGKTEVA~RAafkav~~ 673 (1187)
T Consensus 231 ~~~r~~~~~~~~~~~~~~~~l~~~~~~~LPF~LT~aQ~~vi~EI~~Dl~~~~~M~RLlQGDVGSGKTvVA~laml~ai~~ 310 (677)
T COG1200 231 LLRRAKRQKRSGIPLPANGELLAKFLAALPFKLTNAQKRVIKEILADLASPVPMNRLLQGDVGSGKTVVALLAMLAAIEA 310 (677)
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 99999875226888886479999999858997678999999999866448666678752676777899999999999872
Q ss_pred CCEEEEEECHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEECHHHHCCCCCCCCCCEEEE
Q ss_conf 75499982436655589999998606789833541066630256777753122576089852065427852023656997
Q gi|254780947|r 674 GLQVAVIAPTTLLVRQHFRLFSERFQGFSVRIASISRFVQTKEAALHKKSITEGQVDIVIGTHALLNPKITFANLGLIII 753 (1187)
Q Consensus 674 gkQvavlvPTTiLa~QH~~tf~~Rf~~~pv~i~~lsRf~~~~e~~~i~~~l~~G~idiviGTH~ll~~~v~f~~LgLlii 753 (1187)
T Consensus 311 G~Q~ALMAPTEILA~QH~~~~~~~l~~~~i~V~lLtG~~kgk~r~~~l~~l~~G~~~ivVGTHALiQd~V~F~~LgLVIi 390 (677)
T COG1200 311 GYQAALMAPTEILAEQHYESLRKWLEPLGIRVALLTGSLKGKARKEILEQLASGEIDIVVGTHALIQDKVEFHNLGLVII 390 (677)
T ss_pred CCEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCHHHHCCEEECCEEEEEE
T ss_conf 88168866379999999999998766519748986446650679999998747998979972212204504420238997
Q ss_pred ECHHHHHHHHHHHHHHCCC-CCCEEEEECCCCCHHHHHHHHCCCCCCEEECCCCCCCCEEEEEEECC-HHHHHHHHHHHH
Q ss_conf 2223300888998863167-88489995353408899997122254122015788775379998579-789899999898
Q gi|254780947|r 754 DEEQHFGVKHKEALKETHT-GVHVLTLSATPIPRTLQLAITGVRELSLISMPPINRIACRTSISIFD-PLVVRETLMREY 831 (1187)
Q Consensus 754 DEEqrFGV~~Ke~lk~~~~-~vdvLtlsATPIPRTL~msl~g~rd~S~i~tpP~~R~~v~T~v~~~~-~~~i~~ai~rEl 831 (1187)
T Consensus 391 DEQHRFGV~QR~~L~~KG~~~Ph~LvMTATPIPRTLAlt~fgDldvS~IdElP~GRkpI~T~~i~~~~~~~v~e~i~~ei 470 (677)
T COG1200 391 DEQHRFGVHQRLALREKGEQNPHVLVMTATPIPRTLALTAFGDLDVSIIDELPPGRKPITTVVIPHERRPEVYERIREEI 470 (677)
T ss_pred ECCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHH
T ss_conf 25210229999999973789996799957985078898886146301112579899740899964444799999999999
Q ss_pred HHCCEEEEEECCCCCH--------HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCEECCCCCC
Q ss_conf 7188599982644692--------88999998616546488861346747899999999638875797610200363322
Q gi|254780947|r 832 YRGGQSFYVCPRLSDL--------EKCYTFLQSEVPELKIAMAHGQMSPKNLEDKMNAFYEGQYDVLLSTSIVESGLDLP 903 (1187)
Q Consensus 832 ~RgGQvf~v~nrv~~i--------~~~~~~l~~l~p~~~i~vaHGqm~~~~le~~m~~F~~~~~dvLv~TtIiEsGlDip 903 (1187)
T Consensus 471 ~~GrQaY~VcPLIeeSE~l~l~~a~~~~~~L~~~~~~~~vgL~HGrm~~~eKd~vM~~Fk~~e~~ILVaTTVIEVGVdVP 550 (677)
T COG1200 471 AKGRQAYVVCPLIEESEKLELQAAEELYEELKSFLPELKVGLVHGRMKPAEKDAVMEAFKEGEIDILVATTVIEVGVDVP 550 (677)
T ss_pred HCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCC
T ss_conf 74997999952535433113654999999999870546367775689867799999999808876899813899523578
Q ss_pred CCCEEEEECHHHCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 33266762502358860455322103567673699996688888988999999999725565248999999851163000
Q gi|254780947|r 904 KANTMIVQRADMFGLAQLYQLRGRVGRSKIASFALFLLPENRPLTAAAQKRLRILQSLNTLGAGFQLASYDLDIRGTGNL 983 (1187)
Q Consensus 904 ~aNTiii~~ad~~GLaqlyQlrGRVGRs~~~ayayl~~~~~~~l~~~a~kRL~ai~~~~~lGsGf~iA~~DleiRGaG~l 983 (1187)
T Consensus 551 nATvMVIe~AERFGLaQLHQLRGRVGRG~~qSyC~Ll~~~~--~~~~a~~RL~im~~t~D---GF~IAE~DLklRGpGe~ 625 (677)
T COG1200 551 NATVMVIENAERFGLAQLHQLRGRVGRGDLQSYCVLLYKPP--LSEVAKQRLKIMRETTD---GFVIAEEDLKLRGPGEL 625 (677)
T ss_pred CCEEEEEECHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC--CCHHHHHHHHHHHHCCC---CCEEHHHHHHCCCCCCC
T ss_conf 87079996543303788887526557887544899996798--77568999998874487---60104656741388654
Q ss_pred CCCCCCCCHHHHHHHHH--HHHHHHHHHHH
Q ss_conf 46111553898338999--99999999998
Q gi|254780947|r 984 LGEEQSGHIREIGFELY--QKMLEETVASI 1011 (1187)
Q Consensus 984 lG~~QsG~i~~vG~~ly--~~ml~~av~~~ 1011 (1187)
T Consensus 626 lG~rQSG~~~f~~Adl~~D~~ile~ar~~a 655 (677)
T COG1200 626 LGTRQSGLPEFRVADLVRDYDILEEARKDA 655 (677)
T ss_pred CCCCCCCCCCEEEEEHHHHHHHHHHHHHHH
T ss_conf 687556886547730875699999999999