HHsearch alignment for GI: 254780947 and conserved domain: COG3267
>COG3267 ExeA Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion].
Probab=92.95 E-value=0.12 Score=31.48 Aligned_cols=208 Identities=18% Similarity=0.159 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99999999887401567787846789899848888874489999999876059885414431665432489999999875
Q gi|254780947|r 591 QKLVDIAAKRAIHSVPPLMVSQDLYSQFIKRFPHVETEDQEKAIDAVIQDLSSGRLMDRLICGDVGFGKTEIALRAAFIA 670 (1187)
Q Consensus 591 ~eLl~lyA~R~~~~g~~f~~d~~~~~eFe~~FpyeET~DQ~~AI~eV~~Dmes~~PMDRLiCGDVGfGKTEVA~RAafka 670 (1187)
T Consensus 4 ~~~~e~~l~~~g~~~~pf~~~~~-------~~~~~~~a~h~e~l~~l~~~i~d~qg~-~~vtGevGsGKTv-~~R-al~~ 73 (269)
T COG3267 4 THLLEMLLNHFGFSRLPFSWDIQ-------PGLDYWAADHNEALLMLHAAIADGQGI-LAVTGEVGSGKTV-LRR-ALLA 73 (269)
T ss_pred HHHHHHHHHHHHHCCCCCCCCHH-------HHHHHHHHHHHHHHHHHHHHHHCCCCE-EEEEECCCCCHHH-HHH-HHHH
T ss_conf 67899999886324488755403-------666643200159999977777517855-9997447776369-999-9998
Q ss_pred HCCCCEEEE-EECHHHHHHHHHHHHHHHH-CCCCCCEEEECCCCCC--HHHHHHHHHHCCCCCEEEEECHHHHCCCCCCC
Q ss_conf 112754999-8243665558999999860-6789833541066630--25677775312257608985206542785202
Q gi|254780947|r 671 VMNGLQVAV-IAPTTLLVRQHFRLFSERF-QGFSVRIASISRFVQT--KEAALHKKSITEGQVDIVIGTHALLNPKITFA 746 (1187)
Q Consensus 671 v~~gkQvav-lvPTTiLa~QH~~tf~~Rf-~~~pv~i~~lsRf~~~--~e~~~i~~~l~~G~idiviGTH~ll~~~v~f~ 746 (1187)
T Consensus 74 s~~~d~~~~v~i~~~~~s~~---~~~~ai~~~l~~--~p~~~~~~~~e~~~~~L~al~~~g~r~------------v--- 133 (269)
T COG3267 74 SLNEDQVAVVVIDKPTLSDA---TLLEAIVADLES--QPKVNVNAVLEQIDRELAALVKKGKRP------------V--- 133 (269)
T ss_pred HCCCCCEEEEEECCCCHHHH---HHHHHHHHHHCC--CCCCHHHHHHHHHHHHHHHHHHHCCCC------------E---
T ss_conf 55788517998357630178---899999998405--832006889999999999999817887------------3---
Q ss_pred CCCEEEEECHHHHHHHHHHHHHHCCCCCC----E--EEEEC----CCCCHHHHHHHHCCCCCCEEECCCCCCCCEEEEEE
Q ss_conf 36569972223300888998863167884----8--99953----53408899997122254122015788775379998
Q gi|254780947|r 747 NLGLIIIDEEQHFGVKHKEALKETHTGVH----V--LTLSA----TPIPRTLQLAITGVRELSLISMPPINRIACRTSIS 816 (1187)
Q Consensus 747 ~LgLliiDEEqrFGV~~Ke~lk~~~~~vd----v--LtlsA----TPIPRTL~msl~g~rd~S~i~tpP~~R~~v~T~v~ 816 (1187)
T Consensus 134 ---~l~vdEah~L~~~~le~Lrll~nl~~~~~~~l~ivL~Gqp~L~~~lr~~~l~e~~~------------R~~ir~~l~ 198 (269)
T COG3267 134 ---VLMVDEAHDLNDSALEALRLLTNLEEDSSKLLSIVLIGQPKLRPRLRLPVLRELEQ------------RIDIRIELP 198 (269)
T ss_pred ---EEEEHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHCHHHHHHHHH------------EEEEEEECC
T ss_conf ---78501676617548999999886203466721145507801143544288985431------------677899538
Q ss_pred ECCHHHHHHHHHHHHHHCCEEEEEECC
Q ss_conf 579789899999898718859998264
Q gi|254780947|r 817 IFDPLVVRETLMREYYRGGQSFYVCPR 843 (1187)
Q Consensus 817 ~~~~~~i~~ai~rEl~RgGQvf~v~nr 843 (1187)
T Consensus 199 P~~~~~t~~yl~~~Le~a~~~~~l~~~ 225 (269)
T COG3267 199 PLTEAETGLYLRHRLEGAGLPEPLFSD 225 (269)
T ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCH
T ss_conf 867478999999998505899666770