HHsearch alignment for GI: 254780947 and conserved domain: KOG0329
>KOG0329 consensus.
Probab=96.67 E-value=0.0095 Score=39.92 Aligned_cols=254 Identities=23% Similarity=0.307 Sum_probs=146.0
Q ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHH--CCC-CEEEEEECHHHHHHHHHHHHHHHHCCCC--CCEEEECCCCCCHHHHH
Q ss_conf 854144316654324899999998751--127-5499982436655589999998606789--83354106663025677
Q gi|254780947|r 645 RLMDRLICGDVGFGKTEIALRAAFIAV--MNG-LQVAVIAPTTLLVRQHFRLFSERFQGFS--VRIASISRFVQTKEAAL 719 (1187)
Q Consensus 645 ~PMDRLiCGDVGfGKTEVA~RAafkav--~~g-kQvavlvPTTiLa~QH~~tf~~Rf~~~p--v~i~~lsRf~~~~e~~~ 719 (1187)
T Consensus 78 lgmdvlcqaksgmgktavfvl~tlqqiepv~g~vsvlvmchtrelafqi~~ey-~rfskymP~vkvaVFfGG~~Ikkdee 156 (387)
T KOG0329 78 LGMDVLCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEY-ERFSKYMPSVKVSVFFGGLFIKKDEE 156 (387)
T ss_pred HCCHHHEECCCCCCCEEEEEHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHH-HHHHHHCCCCEEEEEECCEECCCCHH
T ss_conf 34112010025788436552223552378898079999962189999988999-99975488845899975531034699
Q ss_pred HHHHHCCCCCEEEEECH-HHH----CCCCCCCCCCEEEEECHHHH------HHHHHHHHHHCCCCCCEEEEECCCCCHHH
Q ss_conf 77531225760898520-654----27852023656997222330------08889988631678848999535340889
Q gi|254780947|r 720 HKKSITEGQVDIVIGTH-ALL----NPKITFANLGLIIIDEEQHF------GVKHKEALKETHTGVHVLTLSATPIPRTL 788 (1187)
Q Consensus 720 i~~~l~~G~idiviGTH-~ll----~~~v~f~~LgLliiDEEqrF------GV~~Ke~lk~~~~~vdvLtlsATPIPRTL 788 (1187)
T Consensus 157 ~lk~----~PhivVgTPGrilALvr~k~l~lk~vkhFvlDEcdkmle~lDMrRDvQEifr~tp~~KQvmmfsatlsk--- 229 (387)
T KOG0329 157 LLKN----CPHIVVGTPGRILALVRNRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSK--- 229 (387)
T ss_pred HHHC----CCEEEECCCHHHHHHHHHCCCCHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCH---
T ss_conf 8827----990897682889999872457532032112333778999878888799986328653203454201315---
Q ss_pred HHHHHCCCCCCEEECCCCCCC----CEEEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHCC--CCC
Q ss_conf 999712225412201578877----53799985797898999998987188599982644692889999986165--464
Q gi|254780947|r 789 QLAITGVRELSLISMPPINRI----ACRTSISIFDPLVVRETLMREYYRGGQSFYVCPRLSDLEKCYTFLQSEVP--ELK 862 (1187)
Q Consensus 789 ~msl~g~rd~S~i~tpP~~R~----~v~T~v~~~~~~~i~~ai~rEl~RgGQvf~v~nrv~~i~~~~~~l~~l~p--~~~ 862 (1187)
T Consensus 230 --------e-----iRpvC~kFmQdPmEi~vDdE~KL---------tLHGLqQ~YvkLke~eKN---rkl~dLLd~LeFN 284 (387)
T KOG0329 230 --------E-----IRPVCHKFMQDPMEIFVDDEAKL---------TLHGLQQYYVKLKENEKN---RKLNDLLDVLEFN 284 (387)
T ss_pred --------H-----HHHHHHHHHCCCHHHHCCCHHHH---------HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHC
T ss_conf --------6-----67887755218166502415655---------333477877766555543---5666565454412
Q ss_pred EEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCEECCCCCCCCCEEEEECHHHCCCCHHHHHH-HHCCCCCCCCEEEEEE
Q ss_conf 888613467478999999996388757976102003633223326676250235886045532-2103567673699996
Q gi|254780947|r 863 IAMAHGQMSPKNLEDKMNAFYEGQYDVLLSTSIVESGLDLPKANTMIVQRADMFGLAQLYQLR-GRVGRSKIASFALFLL 941 (1187)
Q Consensus 863 i~vaHGqm~~~~le~~m~~F~~~~~dvLv~TtIiEsGlDip~aNTiii~~ad~~GLaqlyQlr-GRVGRs~~~ayayl~~ 941 (1187)
T Consensus 285 QVvIFvKsv~R------l~f-~kr---~vat~lfgrgmdiervNi--~~NYdmp~~~DtYlHrv~rAgrfGtkglaitfv 352 (387)
T KOG0329 285 QVVIFVKSVQR------LSF-QKR---LVATDLFGRGMDIERVNI--VFNYDMPEDSDTYLHRVARAGRFGTKGLAITFV 352 (387)
T ss_pred CEEEEEEHHHH------HHH-HHH---HHHHHHHCCCCCCCCCEE--EECCCCCCCCHHHHHHHHHHHCCCCCCCEEEHH
T ss_conf 04676203445------556-666---677664046667332202--322689887127888762430356555201000
Q ss_pred CC
Q ss_conf 68
Q gi|254780947|r 942 PE 943 (1187)
Q Consensus 942 ~~ 943 (1187)
T Consensus 353 s~ 354 (387)
T KOG0329 353 SD 354 (387)
T ss_pred CC
T ss_conf 11