HHsearch alignment for GI: 254780947 and conserved domain: KOG0348

>KOG0348 consensus.
Probab=98.96  E-value=3e-07  Score=74.62  Aligned_cols=322  Identities=24%  Similarity=0.271  Sum_probs=205.7

Q ss_pred             CCCHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHH---H------HHCCCCEEE
Q ss_conf             8784678989984888-88744899999998760598854144316654324899999998---7------511275499
Q gi|254780947|r  609 MVSQDLYSQFIKRFPH-VETEDQEKAIDAVIQDLSSGRLMDRLICGDVGFGKTEIALRAAF---I------AVMNGLQVA  678 (1187)
Q Consensus       609 ~~d~~~~~eFe~~Fpy-eET~DQ~~AI~eV~~Dmes~~PMDRLiCGDVGfGKTEVA~RAaf---k------av~~gkQva  678 (1187)
T Consensus       142 GL~~~lv~~L~~~m~i~~pTsVQkq~IP~lL~------grD~lV~aQTGSGKTLAYllPiVq~Lq~m~~ki~Rs~G~~AL  215 (708)
T KOG0348         142 GLHPHLVSHLNTKMKISAPTSVQKQAIPVLLE------GRDALVRAQTGSGKTLAYLLPIVQSLQAMEPKIQRSDGPYAL  215 (708)
T ss_pred             CCCHHHHHHHHHHHCCCCCCHHHHCCHHHHHC------CCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEE
T ss_conf             77779999998874557640676502035525------863478857788621799999999997268655556883489


Q ss_pred             EEECHHHHHHHHHHHHHHHHCCCC--CCEEEECCCCCCHHHHHHHHHHCCCCCEEEEEC------HHHHCCCCCCCCCCE
Q ss_conf             982436655589999998606789--833541066630256777753122576089852------065427852023656
Q gi|254780947|r  679 VIAPTTLLVRQHFRLFSERFQGFS--VRIASISRFVQTKEAALHKKSITEGQVDIVIGT------HALLNPKITFANLGL  750 (1187)
Q Consensus       679 vlvPTTiLa~QH~~tf~~Rf~~~p--v~i~~lsRf~~~~e~~~i~~~l~~G~idiviGT------H~ll~~~v~f~~LgL  750 (1187)
T Consensus       216 VivPTREL~~Q~y~~~qKLl~~~hWIVPg~lmGGEkkKSEKARLRKG-----iNILIgTPGRLvDHLknT~~i~~s~LRw  290 (708)
T KOG0348         216 VIVPTRELALQIYETVQKLLKPFHWIVPGVLMGGEKKKSEKARLRKG-----INILIGTPGRLVDHLKNTKSIKFSRLRW  290 (708)
T ss_pred             EEECHHHHHHHHHHHHHHHHCCCEEEEECEEECCCCCCCHHHHHHCC-----CEEEECCCHHHHHHHHCCCHHEEEEEEE
T ss_conf             98041999999999999872574377302122363310178887548-----5489758427889874300221003568


Q ss_pred             EEEECHHH-----HHHHHHHHHHHCCC--CC-----------CEEEEECCCCCHHHHHHHHCCCCCCEEE----------
Q ss_conf             99722233-----00888998863167--88-----------4899953534088999971222541220----------
Q gi|254780947|r  751 IIIDEEQH-----FGVKHKEALKETHT--GV-----------HVLTLSATPIPRTLQLAITGVRELSLIS----------  802 (1187)
Q Consensus       751 liiDEEqr-----FGV~~Ke~lk~~~~--~v-----------dvLtlsATPIPRTL~msl~g~rd~S~i~----------  802 (1187)
T Consensus       291 lVlDEaDrlleLGfekdit~Il~~v~~~~~~e~~~~~lp~q~q~mLlSATLtd~V~rLa~~sLkDpv~I~ld~s~~~~~p  370 (708)
T KOG0348         291 LVLDEADRLLELGFEKDITQILKAVHSIQNAECKDPKLPHQLQNMLLSATLTDGVNRLADLSLKDPVYISLDKSHSQLNP  370 (708)
T ss_pred             EEECCHHHHHHCCCHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCC
T ss_conf             98534367876243003999999875002001025566378776766655677788876331568556404301220386


Q ss_pred             --------CCCCCCCCE----------EEEEE--ECC-----HHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHH----
Q ss_conf             --------157887753----------79998--579-----7898999998987188599982644692889999----
Q gi|254780947|r  803 --------MPPINRIAC----------RTSIS--IFD-----PLVVRETLMREYYRGGQSFYVCPRLSDLEKCYTF----  853 (1187)
Q Consensus       803 --------tpP~~R~~v----------~T~v~--~~~-----~~~i~~ai~rEl~RgGQvf~v~nrv~~i~~~~~~----  853 (1187)
T Consensus       371 ~~~a~~ev~~~~~~~~l~~~~iPeqL~qry~vVPpKLRLV~Laa~L~~~~k~~~~qk~iVF~S~~d~--VeFHy~lf~~~  448 (708)
T KOG0348         371 KDKAVQEVDDGPAGDKLDSFAIPEQLLQRYTVVPPKLRLVALAALLLNKVKFEEKQKMIVFFSCSDS--VEFHYSLFSEA  448 (708)
T ss_pred             CHHHHHHCCCCCCCCCCCCCCCCHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHCEEEEEEECHHH--HHHHHHHHHHH
T ss_conf             3145663377534563201238687650068528741089999999998654442306999963257--89999999865


Q ss_pred             ----------------HHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCEECCCCCCCCCEEEEECHHHCC
Q ss_conf             ----------------9861654648886134674789999999963887579761020036332233266762502358
Q gi|254780947|r  854 ----------------LQSEVPELKIAMAHGQMSPKNLEDKMNAFYEGQYDVLLSTSIVESGLDLPKANTMIVQRADMFG  917 (1187)
Q Consensus       854 ----------------l~~l~p~~~i~vaHGqm~~~~le~~m~~F~~~~~dvLv~TtIiEsGlDip~aNTiii~~ad~~G  917 (1187)
T Consensus       449 l~~~~e~~s~~~~s~g~~~l~~~~k~~rLHGsm~QeeRts~f~~Fs~~~~~VLLcTDVAaRGLDlP~V~~vVQYd~P-~s  527 (708)
T KOG0348         449 LLSHLEGSSGAPDSEGLPPLFMDLKFYRLHGSMEQEERTSVFQEFSHSRRAVLLCTDVAARGLDLPHVGLVVQYDPP-FS  527 (708)
T ss_pred             HHCCCCCCCCCCCCCCCHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCCCCCEEEEECCC-CC
T ss_conf             40232366678666798103314637884274348899999875303544278850345426888776769982799-98


Q ss_pred             CCHHHHHHHHCCCCCCCCEEEEEECCC
Q ss_conf             860455322103567673699996688
Q gi|254780947|r  918 LAQLYQLRGRVGRSKIASFALFLLPEN  944 (1187)
Q Consensus       918 LaqlyQlrGRVGRs~~~ayayl~~~~~  944 (1187)
T Consensus       528 ~adylHRvGRTARaG~kG~alLfL~P~  554 (708)
T KOG0348         528 TADYLHRVGRTARAGEKGEALLFLLPS  554 (708)
T ss_pred             HHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf             899999840454346777157886651