HHsearch alignment for GI: 254780947 and conserved domain: KOG0352
>KOG0352 consensus.
Probab=98.44 E-value=0.00017 Score=53.42 Aligned_cols=290 Identities=20% Similarity=0.248 Sum_probs=198.6
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf 87448999999987605988541443166543248999999987511275499982436655589999998606789833
Q gi|254780947|r 626 ETEDQEKAIDAVIQDLSSGRLMDRLICGDVGFGKTEIALRAAFIAVMNGLQVAVIAPTTLLVRQHFRLFSERFQGFSVRI 705 (1187)
Q Consensus 626 ET~DQ~~AI~eV~~Dmes~~PMDRLiCGDVGfGKTEVA~RAafkav~~gkQvavlvPTTiLa~QH~~tf~~Rf~~~pv~i 705 (1187)
T Consensus 21 Ks~LQE~A~~c~VK-----~k~DVyVsMPTGaGKSLCy---QLPaL~~~gITIV~SPLiALIkDQ----iDHL~~LKVp~ 88 (641)
T KOG0352 21 KSRLQEQAINCIVK-----RKCDVYVSMPTGAGKSLCY---QLPALVHGGITIVISPLIALIKDQ----IDHLKRLKVPC 88 (641)
T ss_pred CCHHHHHHHHHHHH-----CCCCEEEECCCCCCHHHHH---HCHHHHHCCEEEEECHHHHHHHHH----HHHHHHHCCCH
T ss_conf 37578998999883-----4673799646887601454---265877288189930789999999----87787405616
Q ss_pred EEECCCCCCHHHHHHHHHHCCCC--CEEEEEC---------HHHHCCCCCCCCCCEEEEECHHHHHHHHH----------
Q ss_conf 54106663025677775312257--6089852---------06542785202365699722233008889----------
Q gi|254780947|r 706 ASISRFVQTKEAALHKKSITEGQ--VDIVIGT---------HALLNPKITFANLGLIIIDEEQHFGVKHK---------- 764 (1187)
Q Consensus 706 ~~lsRf~~~~e~~~i~~~l~~G~--idiviGT---------H~ll~~~v~f~~LgLliiDEEqrFGV~~K---------- 764 (1187)
T Consensus 89 ~SLNSKlSt~ER~ri~~DL~~ekp~~K~LYITPE~AAt~~FQ~lLn~L~~r~~L~Y~vVDEAHC--VSQWGHDFRPDYL~ 166 (641)
T KOG0352 89 ESLNSKLSTVERSRIMGDLAKEKPTIKMLYITPEGAATDGFQKLLNGLANRDVLRYIVVDEAHC--VSQWGHDFRPDYLT 166 (641)
T ss_pred HHHHCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCEEEEEEECHHHH--HHHHCCCCCCCHHH
T ss_conf 6640121078899998888743775148997631555666899999887414022477334666--77626666820444
Q ss_pred -HHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCCEEECCCCCCCCEEEEEEE------CCHHHHHHHHHH--------
Q ss_conf -98863167884899953534088999971222541220157887753799985------797898999998--------
Q gi|254780947|r 765 -EALKETHTGVHVLTLSATPIPRTLQLAITGVRELSLISMPPINRIACRTSISI------FDPLVVRETLMR-------- 829 (1187)
Q Consensus 765 -e~lk~~~~~vdvLtlsATPIPRTL~msl~g~rd~S~i~tpP~~R~~v~T~v~~------~~~~~i~~ai~r-------- 829 (1187)
T Consensus 167 LG~LRS~~~~vpwvALTATA~~~VqEDi~~qL~----------L~~PVAiFkTP~FR~NLFYD~~~K~~I~D~~~~LaDF 236 (641)
T KOG0352 167 LGSLRSVCPGVPWVALTATANAKVQEDIAFQLK----------LRNPVAIFKTPTFRDNLFYDNHMKSFITDCLTVLADF 236 (641)
T ss_pred HHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHH----------CCCCHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 666774469996698543467767799999976----------0585444057414544457888887641377789999
Q ss_pred ---HHH------------HCCEEEEEECCC-CCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEC
Q ss_conf ---987------------188599982644-6928899999861654648886134674789999999963887579761
Q gi|254780947|r 830 ---EYY------------RGGQSFYVCPRL-SDLEKCYTFLQSEVPELKIAMAHGQMSPKNLEDKMNAFYEGQYDVLLST 893 (1187)
Q Consensus 830 ---El~------------RgGQvf~v~nrv-~~i~~~~~~l~~l~p~~~i~vaHGqm~~~~le~~m~~F~~~~~dvLv~T 893 (1187)
T Consensus 237 ~~~~LG~~~~~~~~~K~~~GCGI--VYCRTR~~cEq~AI~l~~~G--i~A~AYHAGLK~~ERTeVQe~WM~~~~PvI~AT 312 (641)
T KOG0352 237 SSSNLGKHEKASQNKKTFTGCGI--VYCRTRNECEQVAIMLEIAG--IPAMAYHAGLKKKERTEVQEKWMNNEIPVIAAT 312 (641)
T ss_pred HHHHCCCCHHHHCCCCCCCCCEE--EEECCHHHHHHHHHHHHHCC--CCHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEE
T ss_conf 99862890444117877777327--99602889998988753247--626776500141126889999862788779996
Q ss_pred CCEECCCCCCCCCEEEEECHHHCCCCHHHHHHHHCCCCCCCCEEEEEECCC
Q ss_conf 020036332233266762502358860455322103567673699996688
Q gi|254780947|r 894 SIVESGLDLPKANTMIVQRADMFGLAQLYQLRGRVGRSKIASFALFLLPEN 944 (1187)
Q Consensus 894 tIiEsGlDip~aNTiii~~ad~~GLaqlyQlrGRVGRs~~~ayayl~~~~~ 944 (1187)
T Consensus 313 ~SFGMGVDKp~VRFViHW~~~q-n~AgYYQESGRAGRDGk~SyCRLYYsR~ 362 (641)
T KOG0352 313 VSFGMGVDKPDVRFVIHWSPSQ-NLAGYYQESGRAGRDGKRSYCRLYYSRQ 362 (641)
T ss_pred ECCCCCCCCCCEEEEEECCHHH-HHHHHHHHCCCCCCCCCCCCEEEEECCC
T ss_conf 0244466877615999517056-5789988615356677725201333214