HHsearch alignment for GI: 254780947 and conserved domain: PRK07246
>PRK07246 bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated.
Probab=93.38 E-value=0.66 Score=25.73 Aligned_cols=83 Identities=14% Similarity=0.165 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCEECCCCC
Q ss_conf 89999989871885999826446928899999861654648886134674789999999963887579761020036332
Q gi|254780947|r 823 VRETLMREYYRGGQSFYVCPRLSDLEKCYTFLQSEVPELKIAMAHGQMSPKNLEDKMNAFYEGQYDVLLSTSIVESGLDL 902 (1187)
Q Consensus 823 i~~ai~rEl~RgGQvf~v~nrv~~i~~~~~~l~~l~p~~~i~vaHGqm~~~~le~~m~~F~~~~~dvLv~TtIiEsGlDi 902 (1187)
T Consensus 636 la~~i~~l~~~~g~~LVLFTS~~~l~~v~~~L~~~~--~~-~L~Qg~--~gs~~~l~~rF~~~~~siLlGt~SFWEGVDl 710 (820)
T PRK07246 636 IAKRLESLKQEGQPILVLFNSKKHLLAVSDYLDQWQ--VS-HLAQEK--NGTAYNIKKRFDRGEQTILLGLGSFWEGVDF 710 (820)
T ss_pred HHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCC--CC-EEEECC--CCCHHHHHHHHHHCCCEEEEECCCCCCCCCC
T ss_conf 999999999749999999530999999999985379--97-788679--7679999999984899699976676466448
Q ss_pred CCC--CEEEE
Q ss_conf 233--26676
Q gi|254780947|r 903 PKA--NTMIV 910 (1187)
Q Consensus 903 p~a--NTiii 910 (1187)
T Consensus 711 pG~~L~~vVI 720 (820)
T PRK07246 711 IQADRMIEVI 720 (820)
T ss_pred CCCCEEEEEE
T ss_conf 9987799998