HHsearch alignment for GI: 254780947 and conserved domain: PRK08074
>PRK08074 bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated.
Probab=97.95 E-value=0.003 Score=43.75 Aligned_cols=135 Identities=19% Similarity=0.207 Sum_probs=87.5
Q ss_pred EEEEECCCC---CHHHHHHHHCCCCCC---EEECCCCC-CCCEEEEEEE-------CCH----HHHHHHHHHHHH-HCCE
Q ss_conf 899953534---088999971222541---22015788-7753799985-------797----898999998987-1885
Q gi|254780947|r 776 VLTLSATPI---PRTLQLAITGVRELS---LISMPPIN-RIACRTSISI-------FDP----LVVRETLMREYY-RGGQ 836 (1187)
Q Consensus 776 vLtlsATPI---PRTL~msl~g~rd~S---~i~tpP~~-R~~v~T~v~~-------~~~----~~i~~ai~rEl~-RgGQ 836 (1187)
T Consensus 679 vi~tSATLtv~~~F~y~~~~lGL~~~~~~~~~l~SPFdy~~q~~l~vp~d~p~~~~~~~~~~~~~la~~i~~l~~~~~G~ 758 (932)
T PRK08074 679 VILTSATLTVNGSFDYIIERLGLHDFYPRTLQIPSPFSYEEQMKLMIPTDMPPIKDVPIEEYIEEVAAYIAKIAKATKGR 758 (932)
T ss_pred EEEEECCCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCHHHCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99981467889864999986599866752797289998354248998678888889986899999999999999872999
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCCE-EEEECCCCHHHHHHHHHHHHCCCCCEEEECCCEECCCCCCCC--CEEEEE
Q ss_conf 999826446928899999861654648-886134674789999999963887579761020036332233--266762
Q gi|254780947|r 837 SFYVCPRLSDLEKCYTFLQSEVPELKI-AMAHGQMSPKNLEDKMNAFYEGQYDVLLSTSIVESGLDLPKA--NTMIVQ 911 (1187)
Q Consensus 837 vf~v~nrv~~i~~~~~~l~~l~p~~~i-~vaHGqm~~~~le~~m~~F~~~~~dvLv~TtIiEsGlDip~a--NTiii~ 911 (1187)
T Consensus 759 ~LVLFtS~~~L~~v~~~l~~~~~~~~~~ll~Qg-~~~~sr~~ll~~F~~~~~svLlGt~SFwEGVDlpGd~L~~ViI~ 835 (932)
T PRK08074 759 MLVLFTSYEMLKKTYYNLKNEEELEGYVLLAQG-VTGGSRARLMKKFQQFDKAILLGTSSFWEGIDIPGDELSCLVIV 835 (932)
T ss_pred EEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEC-CCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEE
T ss_conf 999926599999999998643335795599878-98750999999998479849996566435622799886899998