HHsearch alignment for GI: 254780947 and conserved domain: PRK08939

Probab=92.16  E-value=0.94  Score=24.54  Aligned_cols=76  Identities=18%  Similarity=0.258  Sum_probs=47.1

Q ss_pred             CCHHHHHHHHHHCCCCCCHHHHHHHHHHH---HHCCCCCCCCEE-EECCCCCCHHHHHHHHHHHHHCCCCEEEEEECHHH
Q ss_conf             78467898998488888744899999998---760598854144-31665432489999999875112754999824366
Q gi|254780947|r  610 VSQDLYSQFIKRFPHVETEDQEKAIDAVI---QDLSSGRLMDRL-ICGDVGFGKTEIALRAAFIAVMNGLQVAVIAPTTL  685 (1187)
Q Consensus       610 ~d~~~~~eFe~~FpyeET~DQ~~AI~eV~---~Dmes~~PMDRL-iCGDVGfGKTEVA~RAafkav~~gkQvavlvPTTi  685 (1187)
T Consensus       119 pk~i~~as~~d~--~~~d~~R~~a~~~a~~F~~~y~~~~~~kGlyl~G~~G~GKTyL~~aian~La~~g~~v~~v~~p~~  196 (306)
T PRK08939        119 PKDLLQATLADI--DLDDLDRLDALMAALDFLEAYKPGEKVKGLYLYGDFGVGKTYLLAAIANELAKKGVSSTLVHFPEF  196 (306)
T ss_pred             CHHHHCCCHHHC--CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHH
T ss_conf             799980989864--889778999999999999973769888778898999998999999999999986992999875999


Q ss_pred             HH
Q ss_conf             55
Q gi|254780947|r  686 LV  687 (1187)
Q Consensus       686 La  687 (1187)
T Consensus       197 ~~  198 (306)
T PRK08939        197 IR  198 (306)
T ss_pred             HH
T ss_conf             99