HHsearch alignment for GI: 254780947 and conserved domain: PRK09506
>PRK09506 mrcB penicillin-binding protein 1b; Reviewed.
Probab=97.99 E-value=5.4e-05 Score=57.24 Aligned_cols=88 Identities=13% Similarity=0.323 Sum_probs=70.7
Q ss_pred CHHHHHCCCCCHHHHHCCEEEEECCCCCCHHHHHHHHHHCCCEECCCCCCCCEEEEECCEEEEECCCCCC--------CE
Q ss_conf 6678523699866885154899409741999999999982884554521783165457475730698887--------26
Q gi|254780947|r 114 TVSAVMCRSVNIMSIKDYKLSIQSKDQIDMAKVIEKLETNGFQRVNAVYKVGEYAVRGGILDVYEPTKKY--------PV 185 (1187)
Q Consensus 114 t~~ALlqklpp~~~l~~~~l~L~vGd~id~~~L~~~Lv~~GY~Rv~~Ve~~GEFAvRGgIIDIFp~~~~~--------Pi 185 (1187)
T Consensus 92 ~f~g~~w~lP-a-~Vyar~l~l~~g~~~~~~~~~~eL~~l~Yr~~~~~~~~G~~~~~~~~~~~~~R~F~f~dg~e~~~~~ 169 (839)
T PRK09506 92 RIDGKVWQLP-A-AVYGRMVNLEPDMSYSKNEMVKLLEATQYRQVSKMTRPGEFTVQANSIEMIRRPFDFPDSKEGQVRA 169 (839)
T ss_pred HCCCCEECCC-H-HHEECCEECCCCCCCCHHHHHHHHHHCCCEECCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCEEE
T ss_conf 6378620567-5-4321201106899589999999999749703589999805998389899995687899988766689
Q ss_pred EEECCCCEEEEEEEEECC
Q ss_conf 886348722101545137
Q gi|254780947|r 186 RLDFFGNTIDSLRLFDSS 203 (1187)
Q Consensus 186 RIEFFGDeIESIR~FDp~ 203 (1187)
T Consensus 170 ~~~f~~~~v~~i~~~~~~ 187 (839)
T PRK09506 170 RLTFDGDRLATIVNLDNN 187 (839)
T ss_pred EEEECCCEEEEEEECCCC
T ss_conf 999869858886735888