HHsearch alignment for GI: 254780947 and conserved domain: PRK12901
>PRK12901 secA preprotein translocase subunit SecA; Reviewed.
Probab=95.32 E-value=0.11 Score=31.62 Aligned_cols=193 Identities=18% Similarity=0.226 Sum_probs=110.5
Q ss_pred ECHHHHCCCCCC--CCCCEEEEECH-------HHHH------HHHHHHHHHCCCCCCEEE---------------EECCC
Q ss_conf 520654278520--23656997222-------3300------888998863167884899---------------95353
Q gi|254780947|r 734 GTHALLNPKITF--ANLGLIIIDEE-------QHFG------VKHKEALKETHTGVHVLT---------------LSATP 783 (1187)
Q Consensus 734 GTH~ll~~~v~f--~~LgLliiDEE-------qrFG------V~~Ke~lk~~~~~vdvLt---------------lsATP 783 (1187)
T Consensus 498 ~A~~l~~~d~dYiV~dg~V~IVDefTGR~m~gRr~sdGLHQAiEAKEgv~i~~e~~tlAsIT~Qn~Fr~Y~kLsGMTGTA 577 (1111)
T PRK12901 498 KAYTLFEKDDEYVVMDGKVKIVDEQTGRIMEGRRYSDGLHQAIEAKENVKIEAATQTFATITLQNYFRMYHKLSGMTGTA 577 (1111)
T ss_pred HHHHHHHCCCCEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHCCCHHCCCCCCC
T ss_conf 99999843862253278189986788887899956517899999981888788873103534877873254531676776
Q ss_pred CCHHHHHHHHCCCCCCEEECCCCC---C--CCEEEEEEECC--HHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHH
Q ss_conf 408899997122254122015788---7--75379998579--7898999998987188599982644692889999986
Q gi|254780947|r 784 IPRTLQLAITGVRELSLISMPPIN---R--IACRTSISIFD--PLVVRETLMREYYRGGQSFYVCPRLSDLEKCYTFLQS 856 (1187)
Q Consensus 784 IPRTL~msl~g~rd~S~i~tpP~~---R--~~v~T~v~~~~--~~~i~~ai~rEl~RgGQvf~v~nrv~~i~~~~~~l~~ 856 (1187)
T Consensus 578 --~te~~Ef~~iY~l~Vv~IPTn~P~~R~D~~D~iy~t~~~K~~Aii~ei-~~~~~~GqPVLVGT~SVe~SE~lS~~L~~ 654 (1111)
T PRK12901 578 --ETEAGELWDIYKLDVVVIPTNRPIARKDKNDRVYKTKREKYNAVIEEI-VELVEAGRPVLVGTTSVEISELLSRMLKM 654 (1111)
T ss_pred --HHHHHHHHHHHCCCEEECCCCCCCEEEECCCEEECCHHHHHHHHHHHH-HHHHHCCCCEEEEECCHHHHHHHHHHHHH
T ss_conf --889999999868866981799986566288838669999999999999-99996499789971718889999999987
Q ss_pred HCCCCCEEEEECCCCH--HHHHHHHHHHHCCCCCEEEECCCEECCCCCCCCCEEEEECHHHCCCCHHH------------
Q ss_conf 1654648886134674--78999999996388757976102003633223326676250235886045------------
Q gi|254780947|r 857 EVPELKIAMAHGQMSP--KNLEDKMNAFYEGQYDVLLSTSIVESGLDLPKANTMIVQRADMFGLAQLY------------ 922 (1187)
Q Consensus 857 l~p~~~i~vaHGqm~~--~~le~~m~~F~~~~~dvLv~TtIiEsGlDip~aNTiii~~ad~~GLaqly------------ 922 (1187)
T Consensus 655 ~------gi~h~VLNAk~h~~EAeIIA~AG~~GaVTIATNMAGRGTDIkL~-------~~v~~~GGL~VigTERheSrRI 721 (1111)
T PRK12901 655 R------KIPHNVLNAKLHQKEAEIVAEAGQKGTVTIATNMAGRGTDIKLS-------PEVKAAGGLAIIGTERHESRRV 721 (1111)
T ss_pred C------CCHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC-------HHHHHCCCCEEEECCCCHHHHH
T ss_conf 7------87387737787799999998468999679724345788582536-------5578627827752032312567
Q ss_pred --HHHHHCCCCCCCCEEEEEEC
Q ss_conf --53221035676736999966
Q gi|254780947|r 923 --QLRGRVGRSKIASFALFLLP 942 (1187)
Q Consensus 923 --QlrGRVGRs~~~ayayl~~~ 942 (1187)
T Consensus 722 DnQLrGRsGRQGDPG~S~F~lS 743 (1111)
T PRK12901 722 DRQLRGRAGRQGDPGSSQFFVS 743 (1111)
T ss_pred HHHHCCCCCCCCCCCCCEEEEE
T ss_conf 7786043244689875426653