HHsearch alignment for GI: 254780947 and conserved domain: PRK13104

>PRK13104 secA preprotein translocase subunit SecA; Reviewed.
Probab=95.72  E-value=0.078  Score=32.88  Aligned_cols=197  Identities=13%  Similarity=0.187  Sum_probs=97.9

Q ss_pred             CHHCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCC----CCCHHHH--HCCCCCCEEEEECCCC
Q ss_conf             000185899999999998679829999589458999998677648873323----4522455--2046684799981044
Q gi|254780947|r  388 WESGGRFDKFLSHVAQQAQKGIKTIISASSQGALQHLIHLIESHGFKKIKK----INTLTEI--NSLLKEEIAAVILPIN  461 (1187)
Q Consensus       388 ~~~~g~l~~L~~~I~~~~k~g~rViI~a~s~~~~eRL~elL~e~gI~~~~~----~~~~~~~--~~~~~~~i~i~~~~L~  461 (1187)
T Consensus       424 ~t~~~K~~Av~~ei~~~~~~gqPVLvGT~sve~SE~ls~~L~~~gi~h~VLNAk~~~~EA~Iia~AG~~gaVTIATNMAG  503 (896)
T PRK13104        424 LTQADKFQAIIEDVRECGVRRQPVLVGTVSIEASEFLSQLLKKENIKHQVLNAKFHEKEAQIIAEAGRPGAVTIATNMAG  503 (896)
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCC
T ss_conf             28999999999999999975997899348579899999999986992465267874789999983389996897165568


Q ss_pred             CCCC--C-CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC-CHHHHCCCCCEEECCCCCEEEECCCCCCC----------
Q ss_conf             6874--6-65688712001373111221222222211012-24440323511203554233112310145----------
Q gi|254780947|r  462 QGFE--T-KHMILVTETDLLGKKIARRVVRKKNVHAQSFF-DSSNIEEGAIIVHAEHGIGRFVRLYSIEV----------  527 (1187)
Q Consensus       462 ~GF~--~-~kl~vITE~EIFG~k~~~r~~rkk~~~~~~i~-dl~eL~~GDyVVH~dHGIGrY~GLe~l~v----------  527 (1187)
T Consensus       504 RGTDI~LGg~~----~~~~~~~~~~~~~~-~----~e~~~~~~~--~~~~~v~~-~GGL-~VigterhesrRiD~QLrGR  570 (896)
T PRK13104        504 RGTDIVLGGSL----AADLANLPADASEQ-E----KEAVKKEWQ--KRHDEVIA-AGGL-RIIGSERHESRRIDNQLRGR  570 (896)
T ss_pred             CCCCCCCCCCC----HHHHHCCCCCCHHH-H----HHHHHHHHH--HHHHHHHH-CCCE-EEEEECCCHHHHHHHHHHCC
T ss_conf             88582178751----24443056551166-7----999999999--85334420-5872-89860433124677786053


Q ss_pred             CCCCCCEEEEEECCCCEEEEEHHH-----------HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-
Q ss_conf             666663599998699879966675-----------21111003678885323434034899999999999999999999-
Q gi|254780947|r  528 SGTFHDCLELHYADNAKLFVPVEN-----------IDLISRYSTEITTVTLDKLGGSAWKTRKANLKKRLEDLAQKLVD-  595 (1187)
Q Consensus       528 ~G~~~DyL~IeYa~~DkLYVPv~~-----------l~lIskYg~~~~~p~L~kLGg~~W~k~K~Kakk~v~diA~eLl~-  595 (1187)
T Consensus       571 aGRQGD------PG~s~F~lSleDdLmr~Fg~~~i~~~m~~lg~~e~e~Ie~~~itk~Ie~AQkkVE~~nfdiRK~lLeY  644 (896)
T PRK13104        571 AGRQGD------PGSSRFYLSLEDNLMRIFASERVASMMRRLGMQPGEPIEHSLVTRAIENAQRKLEGHHFDVRKQLLDY  644 (896)
T ss_pred             CCCCCC------CCCCEEEEECCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             245689------98632665333799987461669999997178887633336689999999999999879999999888


Q ss_pred             ----------HHHHHHHH
Q ss_conf             ----------99988740
Q gi|254780947|r  596 ----------IAAKRAIH  603 (1187)
Q Consensus       596 ----------lyA~R~~~  603 (1187)
T Consensus       645 DdVmn~QR~vIY~qR~~I  662 (896)
T PRK13104        645 DNVANDQRQVIYTQRSSI  662 (896)
T ss_pred             HHHHHHHHHHHHHHHHHH
T ss_conf             899999999999999998