HHsearch alignment for GI: 254780947 and conserved domain: PRK13104
>PRK13104 secA preprotein translocase subunit SecA; Reviewed.
Probab=95.72 E-value=0.078 Score=32.88 Aligned_cols=197 Identities=13% Similarity=0.187 Sum_probs=97.9
Q ss_pred CHHCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCC----CCCHHHH--HCCCCCCEEEEECCCC
Q ss_conf 000185899999999998679829999589458999998677648873323----4522455--2046684799981044
Q gi|254780947|r 388 WESGGRFDKFLSHVAQQAQKGIKTIISASSQGALQHLIHLIESHGFKKIKK----INTLTEI--NSLLKEEIAAVILPIN 461 (1187)
Q Consensus 388 ~~~~g~l~~L~~~I~~~~k~g~rViI~a~s~~~~eRL~elL~e~gI~~~~~----~~~~~~~--~~~~~~~i~i~~~~L~ 461 (1187)
T Consensus 424 ~t~~~K~~Av~~ei~~~~~~gqPVLvGT~sve~SE~ls~~L~~~gi~h~VLNAk~~~~EA~Iia~AG~~gaVTIATNMAG 503 (896)
T PRK13104 424 LTQADKFQAIIEDVRECGVRRQPVLVGTVSIEASEFLSQLLKKENIKHQVLNAKFHEKEAQIIAEAGRPGAVTIATNMAG 503 (896)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCC
T ss_conf 28999999999999999975997899348579899999999986992465267874789999983389996897165568
Q ss_pred CCCC--C-CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC-CHHHHCCCCCEEECCCCCEEEECCCCCCC----------
Q ss_conf 6874--6-65688712001373111221222222211012-24440323511203554233112310145----------
Q gi|254780947|r 462 QGFE--T-KHMILVTETDLLGKKIARRVVRKKNVHAQSFF-DSSNIEEGAIIVHAEHGIGRFVRLYSIEV---------- 527 (1187)
Q Consensus 462 ~GF~--~-~kl~vITE~EIFG~k~~~r~~rkk~~~~~~i~-dl~eL~~GDyVVH~dHGIGrY~GLe~l~v---------- 527 (1187)
T Consensus 504 RGTDI~LGg~~----~~~~~~~~~~~~~~-~----~e~~~~~~~--~~~~~v~~-~GGL-~VigterhesrRiD~QLrGR 570 (896)
T PRK13104 504 RGTDIVLGGSL----AADLANLPADASEQ-E----KEAVKKEWQ--KRHDEVIA-AGGL-RIIGSERHESRRIDNQLRGR 570 (896)
T ss_pred CCCCCCCCCCC----HHHHHCCCCCCHHH-H----HHHHHHHHH--HHHHHHHH-CCCE-EEEEECCCHHHHHHHHHHCC
T ss_conf 88582178751----24443056551166-7----999999999--85334420-5872-89860433124677786053
Q ss_pred CCCCCCEEEEEECCCCEEEEEHHH-----------HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-
Q ss_conf 666663599998699879966675-----------21111003678885323434034899999999999999999999-
Q gi|254780947|r 528 SGTFHDCLELHYADNAKLFVPVEN-----------IDLISRYSTEITTVTLDKLGGSAWKTRKANLKKRLEDLAQKLVD- 595 (1187)
Q Consensus 528 ~G~~~DyL~IeYa~~DkLYVPv~~-----------l~lIskYg~~~~~p~L~kLGg~~W~k~K~Kakk~v~diA~eLl~- 595 (1187)
T Consensus 571 aGRQGD------PG~s~F~lSleDdLmr~Fg~~~i~~~m~~lg~~e~e~Ie~~~itk~Ie~AQkkVE~~nfdiRK~lLeY 644 (896)
T PRK13104 571 AGRQGD------PGSSRFYLSLEDNLMRIFASERVASMMRRLGMQPGEPIEHSLVTRAIENAQRKLEGHHFDVRKQLLDY 644 (896)
T ss_pred CCCCCC------CCCCEEEEECCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 245689------98632665333799987461669999997178887633336689999999999999879999999888
Q ss_pred ----------HHHHHHHH
Q ss_conf ----------99988740
Q gi|254780947|r 596 ----------IAAKRAIH 603 (1187)
Q Consensus 596 ----------lyA~R~~~ 603 (1187)
T Consensus 645 DdVmn~QR~vIY~qR~~I 662 (896)
T PRK13104 645 DNVANDQRQVIYTQRSSI 662 (896)
T ss_pred HHHHHHHHHHHHHHHHHH
T ss_conf 899999999999999998