HHsearch alignment for GI: 254780947 and conserved domain: PTZ00110
>PTZ00110 helicase; Provisional.
Probab=99.88 E-value=2e-17 Score=152.99 Aligned_cols=378 Identities=17% Similarity=0.195 Sum_probs=259.6
Q ss_pred CCCCHHHHHHHHHHHH--------HHHHHHHHHHHHHH-HHHHHH--CCCCCCCCHHHHHHHHHHCC------------C
Q ss_conf 3434034899999999--------99999999999999-988740--15677878467898998488------------8
Q gi|254780947|r 568 DKLGGSAWKTRKANLK--------KRLEDLAQKLVDIA-AKRAIH--SVPPLMVSQDLYSQFIKRFP------------H 624 (1187)
Q Consensus 568 ~kLGg~~W~k~K~Kak--------k~v~diA~eLl~ly-A~R~~~--~g~~f~~d~~~~~eFe~~Fp------------y 624 (1187)
T Consensus 126 ~~l~~i~w~~~~l~~f~KnfY~eh~~v~~~s~~ev~~~r~~~~i~v~~G~~vP~Pi~~F~--~~~fp~~il~~i~~~GF~ 203 (602)
T PTZ00110 126 KRLMPIDWNQVELVPFEKNFYKEHPEVSAMSTKEVDDIRKEREITIIAGRDVPKPVVSFE--YTSFPDYILKSIEAAGFT 203 (602)
T ss_pred CCCCCCCCCHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCEEECCCCCCCCCCCHH--HCCCCHHHHHHHHHCCCC
T ss_conf 468888875300664135277769767618999999999977988927898994726650--159999999999976999
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHH--------HCCCCEEEEEECHHHHHHHHHHHHHH
Q ss_conf 8874489999999876059885414431665432489999999875--------11275499982436655589999998
Q gi|254780947|r 625 VETEDQEKAIDAVIQDLSSGRLMDRLICGDVGFGKTEIALRAAFIA--------VMNGLQVAVIAPTTLLVRQHFRLFSE 696 (1187)
Q Consensus 625 eET~DQ~~AI~eV~~Dmes~~PMDRLiCGDVGfGKTEVA~RAafka--------v~~gkQvavlvPTTiLa~QH~~tf~~ 696 (1187)
T Consensus 204 ~PTPIQ~qaIPiaLs------GrDvIgiAqTGSGKTLAFlLP~l~hi~~q~~~~~~~gP~aLILaPTRELA~QI~~e~~~ 277 (602)
T PTZ00110 204 EPTPIQVQGWPIALS------GRDMIGIAETGSGKTLAFLLPAIVHINAQPLLRPGDGPIVLVLAPTRELAEQIREQALQ 277 (602)
T ss_pred CCCHHHHHHHHHHHC------CCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHH
T ss_conf 999899999879856------98679987897889999999999998516343678997699973839999999999999
Q ss_pred HHCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEECH-----HHHCCCCCCCCCCEEEEECHHH-----HHHHHHHH
Q ss_conf 6067898335410666302567777531225760898520-----6542785202365699722233-----00888998
Q gi|254780947|r 697 RFQGFSVRIASISRFVQTKEAALHKKSITEGQVDIVIGTH-----ALLNPKITFANLGLIIIDEEQH-----FGVKHKEA 766 (1187)
Q Consensus 697 Rf~~~pv~i~~lsRf~~~~e~~~i~~~l~~G~idiviGTH-----~ll~~~v~f~~LgLliiDEEqr-----FGV~~Ke~ 766 (1187)
T Consensus 278 ~~~~~~ir~~~i~GG~~~~~Q~~~---L~~G-~dIvVATPGRLiDlL~~~~~~L~~v~yLVLDEADRMLDmGFe~qI~~I 353 (602)
T PTZ00110 278 FGRSSKLKNSVAYGGVPKRFQTYA---LRRG-VEILIACPGRLIDFLESNVTNLRRVTYLVLDEADRMLDMGFEPQIRKI 353 (602)
T ss_pred HHCCCCCEEEEEECCCCHHHHHHH---HCCC-CCEEEECCHHHHHHHHCCCCCCCCEEEEEEECHHHHHCCCCHHHHHHH
T ss_conf 715478549999799687999998---7169-999997923899999649987431028998757766354629999999
Q ss_pred HHHCCCCCCEEEEECCCCCHHHHHHHHCCCC-CCEEECCCCCCC---CEEEEEEECCHHHHH---HHHHHHHHHCCEEEE
Q ss_conf 8631678848999535340889999712225-412201578877---537999857978989---999989871885999
Q gi|254780947|r 767 LKETHTGVHVLTLSATPIPRTLQLAITGVRE-LSLISMPPINRI---ACRTSISIFDPLVVR---ETLMREYYRGGQSFY 839 (1187)
Q Consensus 767 lk~~~~~vdvLtlsATPIPRTL~msl~g~rd-~S~i~tpP~~R~---~v~T~v~~~~~~~i~---~ai~rEl~RgGQvf~ 839 (1187)
T Consensus 354 l~~i~pdRQTlLFSAT~p~~V~~LA~~~L~~~Pv~I~Vg~~~~~a~~~I~Q~v~vv~~~eK~~~L~~lL~~~~~~~kvII 433 (602)
T PTZ00110 354 VSQIRPDRQTLMWSATWPKEVQSLARDLCKEEPVHVNVGSLDLTTCHNIKQEVFVIEEHEKRAKLKELLGQIMDGGKILI 433 (602)
T ss_pred HHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCEEE
T ss_conf 98589787799995589989999999982069889993688877778705899996518899999999985278996899
Q ss_pred EECCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCEECCCCCCCCCEEEEECHHHCCCC
Q ss_conf 82644692889999986165464888613467478999999996388757976102003633223326676250235886
Q gi|254780947|r 840 VCPRLSDLEKCYTFLQSEVPELKIAMAHGQMSPKNLEDKMNAFYEGQYDVLLSTSIVESGLDLPKANTMIVQRADMFGLA 919 (1187)
Q Consensus 840 v~nrv~~i~~~~~~l~~l~p~~~i~vaHGqm~~~~le~~m~~F~~~~~dvLv~TtIiEsGlDip~aNTiii~~ad~~GLa 919 (1187)
T Consensus 434 FvnTK~~ad~L~~~L~~~--G~~a~~LHGd~~Q~eR~~~L~~Fr~G~~~ILVATDVAARGLDI~dV~~VINYD~P~--~~ 509 (602)
T PTZ00110 434 FSETKKGADTLTKELRLD--GWPALCIHGDKKQEERTWVLNEFKTGKHPIMIATDVASRGLDVRDVKYVINFDFPN--QI 509 (602)
T ss_pred EECCHHHHHHHHHHHHHC--CCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCHHHCCCCCCCCCEEEEECCCC--CC
T ss_conf 929738999999999867--99579820889999999999999769998898822233155515798799958979--80
Q ss_pred HHHHHH-HHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 045532-21035676736999966888889889999999997255
Q gi|254780947|r 920 QLYQLR-GRVGRSKIASFALFLLPENRPLTAAAQKRLRILQSLNT 963 (1187)
Q Consensus 920 qlyQlr-GRVGRs~~~ayayl~~~~~~~l~~~a~kRL~ai~~~~~ 963 (1187)
T Consensus 510 edYVHRIGRTGRAG~kG~A~TF~Tpd~~--~~a~~Lv~~L~ea~q 552 (602)
T PTZ00110 510 EDYVHRIGRTGRAGAKGASYTFLTPDKY--RSARELVKLMREAKQ 552 (602)
T ss_pred CCCCCCCCCCCCCCCCEEEEEEECCCCH--HHHHHHHHHHHHCCC
T ss_conf 2210135615068993169999777707--789999999998389