HHsearch alignment for GI: 254780947 and conserved domain: cd00009
>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Probab=96.38 E-value=0.1 Score=31.96 Aligned_cols=96 Identities=26% Similarity=0.241 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf 48999999987605988541443166543248999999987511275499982436655589999998606789833541
Q gi|254780947|r 629 DQEKAIDAVIQDLSSGRLMDRLICGDVGFGKTEIALRAAFIAVMNGLQVAVIAPTTLLVRQHFRLFSERFQGFSVRIASI 708 (1187)
Q Consensus 629 DQ~~AI~eV~~Dmes~~PMDRLiCGDVGfGKTEVA~RAafkav~~gkQvavlvPTTiLa~QH~~tf~~Rf~~~pv~i~~l 708 (1187)
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~ill~GppGtGKT~la~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 71 (151)
T cd00009 2 GQEEAIEALREALELPPPKNLLLYGPPGTGKTTLARAIANELFRPGAPFLYLNASDLLEGLVVAELFGHF---------- 71 (151)
T ss_pred CCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHCCHHHHHHHHHHHH----------
T ss_conf 8579999999998187998089989999886599999999712137982785477704677775760577----------
Q ss_pred CCCCCCHHHHHHHHHHCCCCCEEEEECHHHHCCCCCCCCCCEEEEECHHHHH
Q ss_conf 0666302567777531225760898520654278520236569972223300
Q gi|254780947|r 709 SRFVQTKEAALHKKSITEGQVDIVIGTHALLNPKITFANLGLIIIDEEQHFG 760 (1187)
Q Consensus 709 sRf~~~~e~~~i~~~l~~G~idiviGTH~ll~~~v~f~~LgLliiDEEqrFG 760 (1187)
T Consensus 72 --------------------------~~~~~~~~~~~~~~~vl~iDEi~~l~ 97 (151)
T cd00009 72 --------------------------LVRLLFELAEKAKPGVLFIDEIDSLS 97 (151)
T ss_pred --------------------------HHHHHHHHHHHCCCCEEEEECHHHCC
T ss_conf --------------------------88989999997699869820166559