HHsearch alignment for GI: 254780947 and conserved domain: cd00046

>cd00046 DEXDc DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.

Probab=99.63  E-value=1.3e-14  Score=131.31  Aligned_cols=131  Identities=34%  Similarity=0.444  Sum_probs=112.1

Q ss_pred             CEEEECCCCCCHHHHHHHHHHHHHC--CCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHC
Q ss_conf             1443166543248999999987511--27549998243665558999999860678983354106663025677775312
Q gi|254780947|r  648 DRLICGDVGFGKTEIALRAAFIAVM--NGLQVAVIAPTTLLVRQHFRLFSERFQGFSVRIASISRFVQTKEAALHKKSIT  725 (1187)
Q Consensus       648 DRLiCGDVGfGKTEVA~RAafkav~--~gkQvavlvPTTiLa~QH~~tf~~Rf~~~pv~i~~lsRf~~~~e~~~i~~~l~  725 (1187)
T Consensus         2 ~~lv~~ptGsGKT~~~~~~~~~~~~~~~~~~~lil~Pt~~L~~q~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~   76 (144)
T cd00046           2 DVLLAAPTGSGKTLAALLPILELLDSLKGGQVLVLAPTRELANQVAERLKELF-GEGIKVGYLIGGTSIKQQE----KLL   76 (144)
T ss_pred             CEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHC-CCCCEEEEEECCCCHHHHH----HHH
T ss_conf             99998899717999999999999975689769997467999999999999974-8871799996136367789----874


Q ss_pred             CCCCEEEEECHHHH-----CCCCCCCCCCEEEEECHHH-----HHHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf             25760898520654-----2785202365699722233-----0088899886316788489995353
Q gi|254780947|r  726 EGQVDIVIGTHALL-----NPKITFANLGLIIIDEEQH-----FGVKHKEALKETHTGVHVLTLSATP  783 (1187)
Q Consensus       726 ~G~idiviGTH~ll-----~~~v~f~~LgLliiDEEqr-----FGV~~Ke~lk~~~~~vdvLtlsATP  783 (1187)
T Consensus        77 ~~~~~ilv~T~~~l~~~~~~~~~~~~~~~~vViDEaH~~~~~~~~~~~~~~~~~~~~~~~~l~lSATp  144 (144)
T cd00046          77 SGKTDIVVGTPGRLLDELERLKLSLKKLDLLILDEAHRLLNQGFGLLGLKILLKLPKDRQVLLLSATP  144 (144)
T ss_pred             CCCCCEEECCHHHHHHHHHCCCCCCCCCCEEEEECHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCC
T ss_conf             58984998288999999973876555100999988887643796999999999679999489982899