HHsearch alignment for GI: 254780947 and conserved domain: cd01123

>cd01123 Rad51_DMC1_radA Rad51_DMC1_radA,B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a similiar recombination reaction as RecA, using ATP-dependent DNA binding activity and a DNA-dependent ATPase. However, this reaction is less efficient and requires accessory proteins such as RAD55/57 .
Probab=93.50  E-value=0.58  Score=26.16  Aligned_cols=21  Identities=5%  Similarity=-0.012  Sum_probs=16.0

Q ss_pred             CEEEECCCCCCHHHHHHHHHH
Q ss_conf             608980376522799999998
Q gi|254780947|r   16 KKITLSPVIDGTEGFILAEIA   36 (1187)
Q Consensus        16 ~~i~l~Gl~gs~~allla~l~   36 (1187)
T Consensus        20 ~itEi~G~~GsGKTql~lqla   40 (235)
T cd01123          20 SITEIFGEFGSGKTQLCHQLA   40 (235)
T ss_pred             EEEEEECCCCCCHHHHHHHHH
T ss_conf             799999999984999999999