HHsearch alignment for GI: 254780947 and conserved domain: pfam00004
>pfam00004 AAA ATPase family associated with various cellular activities (AAA). AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes.
Probab=90.02 E-value=1.5 Score=23.07 Aligned_cols=108 Identities=18% Similarity=0.130 Sum_probs=52.7
Q ss_pred EEECCCCCCHHHHHHHHHHH-CCCCEEEEECC----------HHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHCCCCCH
Q ss_conf 89803765227999999986-29989999299----------89999999999985799809985722467010048998
Q gi|254780947|r 18 ITLSPVIDGTEGFILAEIAR-LGLSLVYICSD----------ERILINLKKILTLVVPDIRVIIFPAWDCLPYDRVSPSP 86 (1187)
Q Consensus 18 i~l~Gl~gs~~allla~l~~-~~rpilvI~~d----------~~~A~~l~~dL~~f~~~~~V~~FP~~E~LPYd~~sp~~ 86 (1187)
T Consensus 1 iLl~GppGtGKT~~a~~la~~~~~~~~~v~~~~~~~~~~g~~~~~i~~~f~~a~~~~--p~Il~iDe~d~l~~~~~~~~~ 78 (131)
T pfam00004 1 LLLYGPPGTGKTTLAKAVAKELGAPFIEISGSELVSKYVGESEKRLRELFEAAKKLA--PCVIFIDEIDALAGSRGSGGD 78 (131)
T ss_pred CEEECCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHCC--CCEEEECHHHHHHCCCCCCCC
T ss_conf 987899999999999999999789853324201222334506888999999999749--918983116777516788888
Q ss_pred HHHHHHHHHHHHHHHC-CCCCCCEEEEECHHHHHCCCCCHHHHH
Q ss_conf 9999999999998412-446887699956678523699866885
Q gi|254780947|r 87 YVVTRRLSCISNLVSF-NSSKETIIVLTTVSAVMCRSVNIMSIK 129 (1187)
Q Consensus 87 di~~eRl~~L~~L~~~-~~~~~~~IIVtt~~ALlqklpp~~~l~ 129 (1187)
T Consensus 79 ~~~~~~~~~ll~~ld~~~~~~~~v~~I~tTN~-~~~ld~-al~r 120 (131)
T pfam00004 79 SESRRVVNQLLTELDGFTSSLSKVIVIAATNR-PDKLDP-ALLR 120 (131)
T ss_pred CCCHHHHHHHHHHHHHCCCCCCCEEEEEECCC-HHHCCH-HHHC
T ss_conf 75132687899998502246887699997599-044997-7962