HHsearch alignment for GI: 254780947 and conserved domain: pfam05970
>pfam05970 DUF889 PIF1 helicase. The PIF1 helicase inhibits telomerase activity and is cell cycle regulated.
Probab=94.12 E-value=0.11 Score=31.69 Aligned_cols=42 Identities=10% Similarity=0.054 Sum_probs=29.0
Q ss_pred CCCCCHHHHHHHHHHH----CCCCEEEEECCHHHHHHHH--HHHHHHC
Q ss_conf 3765227999999986----2998999929989999999--9999857
Q gi|254780947|r 22 PVIDGTEGFILAEIAR----LGLSLVYICSDERILINLK--KILTLVV 63 (1187)
Q Consensus 22 Gl~gs~~allla~l~~----~~rpilvI~~d~~~A~~l~--~dL~~f~ 63 (1187)
T Consensus 1 G~AGTGKS~ll~~i~~~l~~~~~~v~vtA~TGiAA~~i~gG~TiHs~~ 48 (418)
T pfam05970 1 GYGGTGKTFLWNALSARIRSRGKIVLNVASSGIAALLLPGGRTAHSRF 48 (418)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHCCCCCEEHHHCC
T ss_conf 979887999999999999768988999896899985169987398526