HHsearch alignment for GI: 254780947 and conserved domain: smart00487
>smart00487 DEXDc DEAD-like helicases superfamily.
Probab=95.54 E-value=0.16 Score=30.47 Aligned_cols=83 Identities=14% Similarity=0.163 Sum_probs=54.0
Q ss_pred CEEEECCCCCCHHHHHHHH-HH---HC--CCCEEEEECCHHHHHHHHHHHHHHCCCCE---EEECCCCCCCCHHCCCCCH
Q ss_conf 6089803765227999999-98---62--99899992998999999999998579980---9985722467010048998
Q gi|254780947|r 16 KKITLSPVIDGTEGFILAE-IA---RL--GLSLVYICSDERILINLKKILTLVVPDIR---VIIFPAWDCLPYDRVSPSP 86 (1187)
Q Consensus 16 ~~i~l~Gl~gs~~allla~-l~---~~--~rpilvI~~d~~~A~~l~~dL~~f~~~~~---V~~FP~~E~LPYd~~sp~~ 86 (1187)
T Consensus 25 ~~~~i~~~tGsGKT~~~~~~~~~~~~~~~~~~~li~~P~~~l~~q~~~~~~~~~~~~~~~~~~~~--------~~~~~-- 94 (201)
T smart00487 25 RDVILAAPTGSGKTLAALLPALEALKRGKGKRVLVLVPTRELAEQWAEELKKLGPSLGLKVVGLY--------GGDSK-- 94 (201)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEEE--------CCCCH--
T ss_conf 98899899996099999999999863389975999908599999999886010210204455652--------47737--
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEEECHHHH
Q ss_conf 99999999999984124468876999566785
Q gi|254780947|r 87 YVVTRRLSCISNLVSFNSSKETIIVLTTVSAV 118 (1187)
Q Consensus 87 di~~eRl~~L~~L~~~~~~~~~~IIVtt~~AL 118 (1187)
T Consensus 95 ------~~~~~~~~----~~~~~i~i~t~~~l 116 (201)
T smart00487 95 ------REQLRKLE----SGKTDILVTTPGRL 116 (201)
T ss_pred ------HHHHHHHH----CCCCCEEEECHHHH
T ss_conf ------99999997----59998999558999