HHsearch alignment for GI: 254780947 and conserved domain: smart00490
>smart00490 HELICc helicase superfamily c-terminal domain.
Probab=94.37 E-value=0.072 Score=33.12 Aligned_cols=61 Identities=13% Similarity=0.352 Sum_probs=52.2
Q ss_pred HHHHHCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEECHHHHCCCCCCCCCCEEEEEC
Q ss_conf 99860678983354106663025677775312257608985206542785202365699722
Q gi|254780947|r 694 FSERFQGFSVRIASISRFVQTKEAALHKKSITEGQVDIVIGTHALLNPKITFANLGLIIIDE 755 (1187)
Q Consensus 694 f~~Rf~~~pv~i~~lsRf~~~~e~~~i~~~l~~G~idiviGTH~ll~~~v~f~~LgLliiDE 755 (1187)
T Consensus 3 l~~~l~~~g~~~~~i~g~~~~~~R~~~~~~f~~~~~~ilv~t-~~~~~Gidl~~~~~vI~~~ 63 (82)
T smart00490 3 LAELLKELGIKVARLHGGLSQEEREEILEKFNNGKIKVLVAT-DVAERGLDLPGVDLVIIYD 63 (82)
T ss_pred HHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEE-EEEEEECCCCCCCEEEEEC
T ss_conf 899998889919999896999999999999987997199995-0242114898899999978