RPSBLAST alignment for GI: 254780947 and conserved domain: COG1200
>gnl|CDD|31393 COG1200, RecG, RecG-like helicase [DNA replication, recombination, and repair / Transcription]. Length = 677
Score = 328 bits (842), Expect = 6e-90
Identities = 167/446 (37%), Positives = 252/446 (56%), Gaps = 30/446 (6%)
Query: 582 LKKRL---EDLAQ--KLVDIAAKRAIHSVPPLMVSQDLYSQFIKRFPHVETEDQEKAIDA 636
++RL E LA L+ AKR S PL + +L ++F+ P T Q++ I
Sbjct: 214 ARRRLAFEELLALQLSLLLRRAKRQKRSGIPLPANGELLAKFLAALPFKLTNAQKRVIKE 273
Query: 637 VIQDLSSGRLMDRLICGDVGFGKTEIALRAAFIAVMNGLQVAVIAPTTLLVRQHFRLFSE 696
++ DL+S M+RL+ GDVG GKT +AL A A+ G Q A++APT +L QH+ +
Sbjct: 274 ILADLASPVPMNRLLQGDVGSGKTVVALLAMLAAIEAGYQAALMAPTEILAEQHYESLRK 333
Query: 697 RFQGFSVRIASISRFVQTKEAALHKKSITEGQVDIVIGTHALLNPKITFANLGLIIIDEE 756
+ +R+A ++ ++ K + + G++DIV+GTHAL+ K+ F NLGL+IIDE+
Sbjct: 334 WLEPLGIRVALLTGSLKGKARKEILEQLASGEIDIVVGTHALIQDKVEFHNLGLVIIDEQ 393
Query: 757 QHFGVKHKEALKET-HTGVHVLTLSATPIPRTLQLAITGVRELSLISMPPINRIACRTSI 815
FGV + AL+E HVL ++ATPIPRTL L G ++S+I P R T +
Sbjct: 394 HRFGVHQRLALREKGEQNPHVLVMTATPIPRTLALTAFGDLDVSIIDELPPGRKPITTVV 453
Query: 816 SIFDPLV--VRETLMREYYRGGQSFYVCPRLSDLEKC--------YTFLQSEVPELKIAM 865
I V E + E +G Q++ VCP + + EK Y L+S +PELK+ +
Sbjct: 454 -IPHERRPEVYERIREEIAKGRQAYVVCPLIEESEKLELQAAEELYEELKSFLPELKVGL 512
Query: 866 AHGQMSPKNLEDKMNAFYEGQYDVLLSTSIVESGLDLPKANTMIVQRADMFGLAQLYQLR 925
HG+M P + M AF EG+ D+L++T+++E G+D+P A M+++ A+ FGLAQL+QLR
Sbjct: 513 VHGRMKPAEKDAVMEAFKEGEIDILVATTVIEVGVDVPNATVMVIENAERFGLAQLHQLR 572
Query: 926 GRVGRSKIASFALFLLPENRPLTAAAQKRLRILQSLNTLGAGFQLASYDLDIRGTGNLLG 985
GRVGR + S+ + L PL+ A++RL+I++ GF +A DL +RG G LLG
Sbjct: 573 GRVGRGDLQSYCVLLY--KPPLSEVAKQRLKIMRETTD---GFVIAEEDLKLRGPGELLG 627
Query: 986 EEQSGHIREIGFELY-----QKMLEE 1006
QSG F + +LEE
Sbjct: 628 TRQSG---LPEFRVADLVRDYDILEE 650