RPSBLAST alignment for GI: 254780947 and conserved domain: COG1204
>gnl|CDD|31397 COG1204, COG1204, Superfamily II helicase [General function prediction only]. Length = 766
Score = 40.4 bits (94), Expect = 0.003
Identities = 78/400 (19%), Positives = 137/400 (34%), Gaps = 89/400 (22%)
Query: 650 LICGDVGFGKTEIALRAAFIAVMNGLQVAV-IAPTTLLVRQHFRLFSERFQGFSVRIASI 708
LI G GKT IAL A ++ G V I P L + + FS R + +R+
Sbjct: 51 LISAPTGSGKTLIALLAILSTLLEGGGKVVYIVPLKALAEEKYEEFS-RLEELGIRVGIS 109
Query: 709 SRFVQTKEAALHKKSITEGQVDIVIGTH----ALLNPKITFANL-GLIIIDEEQHFGVKH 763
+ + L + D+++ T +L + ++ L++IDE G +
Sbjct: 110 TGDYDLDDERLARY-------DVIVTTPEKLDSLTRKRPSWIEEVDLVVIDEIHLLGDRT 162
Query: 764 KEALKET--------HTGVHVLTLSATPIPRTLQLA--ITGVRELSLIS-------MPPI 806
+ + E+ + + ++ LSAT +P ++A + S +P +
Sbjct: 163 RGPVLESIVARMRRLNELIRIVGLSAT-LPNAEEVADWLNAKLVESDWRPVPLRRGVPYV 221
Query: 807 NRIACRTSISIFDPLVVRETLMREYY----RGGQSFYVCP------------------RL 844
PL++ + GGQ L
Sbjct: 222 GAFLGADGKKKTWPLLIDNLALELVLESLAEGGQVLVFVHSRKEAEKTAKKLRIKMSATL 281
Query: 845 SDLEK------CYTFLQSEVPELK-----------IAMAHGQMSPKNLEDKMNAFYEGQY 887
SD EK L E P + +A H + ++ + +AF +G+
Sbjct: 282 SDDEKIVLDEGASPILIPETPTSEDEELAELVLRGVAFHHAGLPREDRQLVEDAFRKGKI 341
Query: 888 DVLLSTSIVESGLDLPKANTMIV---QRADMFGLAQLY------QLRGRVGRSKIASFAL 938
VL+ST + +G++LP A T+I+ +R D G Q+ GR GR +
Sbjct: 342 KVLVSTPTLAAGVNLP-ARTVIIKDTRRYDPKGGIVDIPVLDVLQMAGRAGRPGYDDYGE 400
Query: 939 FLL-------PENRPLTAAAQKRLRILQSL-NTLGAGFQL 970
++ E + I L + L L
Sbjct: 401 AIILATSHDELEYLAELYIQSEPEPIESKLGDELNLRTFL 440