RPSBLAST alignment for GI: 254780947 and conserved domain: KOG0335
>gnl|CDD|35556 KOG0335, KOG0335, KOG0335, ATP-dependent RNA helicase [RNA processing and modification]. Length = 482
Score = 43.0 bits (101), Expect = 6e-04
Identities = 81/372 (21%), Positives = 123/372 (33%), Gaps = 63/372 (16%)
Query: 638 IQDLSSGRLMDRLICGDVGFGKTEIALRAAF-IAVMNGL-----------------QVAV 679
I +S GR D + C G GKT AAF I +++ L + +
Sbjct: 105 IPIISGGR--DLMACAQTGSGKT-----AAFLIPIISYLLDEGPEDRGESGGGVYPRALI 157
Query: 680 IAPTTLLVRQHFRLFSERFQGFSVRIASISRFVQTKEAALHKKSITEGQVDIVIGTHALL 739
+APT LV Q + + FS S V + + DI++ T L
Sbjct: 158 LAPTRELVDQIY----NEARKFSYLSGMKSVVVYGGTDLGAQLRFIKRGCDILVATPGRL 213
Query: 740 NP-----KITFANLGLIIIDE------EQHFGV---KHKEALKETHTGVHVLTLSATPIP 785
KI+ N +++DE E F K E L L + P
Sbjct: 214 KDLIERGKISLDNCKFLVLDEADRMLDEMGFEPQIRKIVEQLGMPPKNNRQTLLFSATFP 273
Query: 786 RTLQLAITGVRELSLISMPPINRIACRTSISIFDPLVVRETLMREYYR---GGQSFYVCP 842
+ +Q + + I + R+ + L V E R
Sbjct: 274 KEIQRLAADFLKDNYI-FLAVGRVGSTSENITQKILFVNEMEKRSKLLDLLNKDDGPPSD 332
Query: 843 RLSDLEKCYTFLQSEVPELKIAMA-----------HGQMSPKNLEDKMNAFYEGQYDVLL 891
EK F++++ ++A HG + E +N F G+ VL+
Sbjct: 333 GEPKWEKTLVFVETKRGADELAAFLSSNGYPAKSIHGDRTQIEREQALNDFRNGKAPVLV 392
Query: 892 STSIVESGLDLPKANTMIVQRADMFGLAQLYQLR-GRVGRSKIASFALFLLPENRPLTAA 950
+T++ GLD+P N V DM Y R GR GR A N
Sbjct: 393 ATNVAARGLDIP--NVKHVINYDMPADIDDYVHRIGRTGRVGNGGRATSFF--NEKNQNI 448
Query: 951 AQKRLRILQSLN 962
A+ + IL N
Sbjct: 449 AKALVEILTEAN 460