RPSBLAST alignment for GI: 254780947 and conserved domain: KOG0335

>gnl|CDD|35556 KOG0335, KOG0335, KOG0335, ATP-dependent RNA helicase [RNA processing and modification]. Length = 482
 Score = 43.0 bits (101), Expect = 6e-04
 Identities = 81/372 (21%), Positives = 123/372 (33%), Gaps = 63/372 (16%)

Query: 638 IQDLSSGRLMDRLICGDVGFGKTEIALRAAF-IAVMNGL-----------------QVAV 679
           I  +S GR  D + C   G GKT     AAF I +++ L                 +  +
Sbjct: 105 IPIISGGR--DLMACAQTGSGKT-----AAFLIPIISYLLDEGPEDRGESGGGVYPRALI 157

Query: 680 IAPTTLLVRQHFRLFSERFQGFSVRIASISRFVQTKEAALHKKSITEGQVDIVIGTHALL 739
           +APT  LV Q +       + FS      S  V        +    +   DI++ T   L
Sbjct: 158 LAPTRELVDQIY----NEARKFSYLSGMKSVVVYGGTDLGAQLRFIKRGCDILVATPGRL 213

Query: 740 NP-----KITFANLGLIIIDE------EQHFGV---KHKEALKETHTGVHVLTLSATPIP 785
                  KI+  N   +++DE      E  F     K  E L           L +   P
Sbjct: 214 KDLIERGKISLDNCKFLVLDEADRMLDEMGFEPQIRKIVEQLGMPPKNNRQTLLFSATFP 273

Query: 786 RTLQLAITGVRELSLISMPPINRIACRTSISIFDPLVVRETLMREYYR---GGQSFYVCP 842
           + +Q       + + I    + R+   +       L V E   R                
Sbjct: 274 KEIQRLAADFLKDNYI-FLAVGRVGSTSENITQKILFVNEMEKRSKLLDLLNKDDGPPSD 332

Query: 843 RLSDLEKCYTFLQSEVPELKIAMA-----------HGQMSPKNLEDKMNAFYEGQYDVLL 891
                EK   F++++    ++A             HG  +    E  +N F  G+  VL+
Sbjct: 333 GEPKWEKTLVFVETKRGADELAAFLSSNGYPAKSIHGDRTQIEREQALNDFRNGKAPVLV 392

Query: 892 STSIVESGLDLPKANTMIVQRADMFGLAQLYQLR-GRVGRSKIASFALFLLPENRPLTAA 950
           +T++   GLD+P  N   V   DM      Y  R GR GR      A      N      
Sbjct: 393 ATNVAARGLDIP--NVKHVINYDMPADIDDYVHRIGRTGRVGNGGRATSFF--NEKNQNI 448

Query: 951 AQKRLRILQSLN 962
           A+  + IL   N
Sbjct: 449 AKALVEILTEAN 460