HHsearch alignment for GI: 254780948 and conserved domain: COG5347

>COG5347 GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion].

Probab=93.18  E-value=0.22  Score=27.94  Aligned_cols=85  Identities=15%  Similarity=0.151  Sum_probs=56.9

Q ss_pred             HHHHHHHCCCCCHHHHCCCCCCCCCEEEEECCCCHHHHCCCCCCCCHHHHHHH-HHHCCC-CCCCHHHHHHHHHHHHHHH
Q ss_conf             99999837676612210235556622443012100111024753200001234-552256-7899899999998999999
Q gi|254780948|r  136 LMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPS-FLWKEE-QTIDADSLKSAFQLTDYFL  213 (240)
Q Consensus       136 l~LL~~lGf~p~L~~C~~cg~~~~l~~~s~~~g~av~~~~~~~~~~kll~lp~-fL~~~~-~~~~~~~i~~~l~lt~~fL  213 (240)
T Consensus         8 ~~~l~~l~~~~~Nk~CaDCga~~-P~W~S~nlGvfiCi~CagvHRs--LGvhiS~VKSitLD~wt~~~l~~-m~~gGN~~   83 (319)
T COG5347           8 RKLLKLLKSDSSNKKCADCGAPN-PTWASVNLGVFLCIDCAGVHRS--LGVHISKVKSLTLDNWTEEELRR-MEVGGNSN   83 (319)
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCC-CCEEECCCCEEEEEECCHHHHC--CCCCEEEEEEEECCCCCHHHHHH-HHHHCCHH
T ss_conf             99999986040568150379999-8448635586987412054423--55540466542014689999999-98704531


Q ss_pred             HHHHHHHCCCC
Q ss_conf             85656628999
Q gi|254780948|r  214 NKYALQHNIIH  224 (240)
Q Consensus       214 ~k~~l~~~~~~  224 (240)
T Consensus        84 a~~~~e~~~~~   94 (319)
T COG5347          84 ANRFYEKNLLD   94 (319)
T ss_pred             HHHHHCCCCCC
T ss_conf             56675148875