BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780948|ref|YP_003065361.1| DNA repair protein RecO [Candidatus Liberibacter asiaticus str. psy62] (240 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|239831498|ref|ZP_04679827.1| DNA repair protein RecO [Ochrobactrum intermedium LMG 3301] gi|239823765|gb|EEQ95333.1| DNA repair protein RecO [Ochrobactrum intermedium LMG 3301] Length = 245 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 106/241 (43%), Positives = 152/241 (63%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ IILG R +GE + I+EVMTR++GRH+G VR G+S RMQP+LQ GN V V W + Sbjct: 3 MEWRDEGIILGTRRHGETSAIVEVMTREHGRHMGMVRGGRSRRMQPLLQPGNHVDVTWWA 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E LE A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 63 RLDEHMGSFTIEPLEFAAARLIETPVALYGIQLAASHLRLLPERDPHRGLYETLRLIIEH 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL +C TGV +DL++VSPKSG AVCR VG P+A Sbjct: 123 FDDPLASGELVLRFEVMMLEELGFGLDLKECAATGVKEDLIYVSPKSGRAVCREVGAPWA 182 Query: 181 EKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +K+L+LP F+ + D + AF +T YFL ++ + I R FL L Sbjct: 183 DKLLLLPGFVNNTAVRAASYDDIDHAFTMTGYFLMRHVWEPRAITPPDARGGFLNALGRA 242 Query: 240 I 240 I Sbjct: 243 I 243 >gi|153009952|ref|YP_001371167.1| DNA repair protein RecO [Ochrobactrum anthropi ATCC 49188] gi|151561840|gb|ABS15338.1| DNA repair protein RecO [Ochrobactrum anthropi ATCC 49188] Length = 243 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 105/241 (43%), Positives = 151/241 (62%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ IILG R +GE + I+EVMTR++GRH+G VR G+S RMQP+LQ GN V V W + Sbjct: 1 MEWRDEGIILGTRRHGETSAIVEVMTREHGRHMGMVRGGRSRRMQPLLQPGNHVDVTWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E LE A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 61 RLDEHMGSFTIEPLEFAAARLIETPVALYGIQLAASHLRLLPERDPHRGLYETLRLIIEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL KC TGV +DL++VSPKSG AVCR G P+A Sbjct: 121 FDDPLASGELVLRFEVMMLEELGFGLDLKKCAATGVKEDLIYVSPKSGRAVCRDAGAPWA 180 Query: 181 EKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +K+L+LP F+ + D + AF +T YFL ++ + + R FL L Sbjct: 181 DKLLLLPGFVNNTAVRASSYDDIDHAFTMTGYFLMRHVWEPRAVTPPDARGGFLNALGRA 240 Query: 240 I 240 I Sbjct: 241 I 241 >gi|260462318|ref|ZP_05810526.1| DNA repair protein RecO [Mesorhizobium opportunistum WSM2075] gi|259031812|gb|EEW33080.1| DNA repair protein RecO [Mesorhizobium opportunistum WSM2075] Length = 258 Score = 203 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 103/239 (43%), Positives = 151/239 (63%), Gaps = 1/239 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ IILG R +GE + ILEVMTR +GRHLG VR G+S + QP+LQ GN V + WR+ Sbjct: 1 MEWRDEGIILGTRKHGETSAILEVMTRTHGRHLGLVRGGRSRKQQPVLQPGNRVDLLWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F+ E +E + A+L+ S++ +YGLQ++ R LPER+ LY+ L++ + Sbjct: 61 RLDEHLGTFQAEPIEMNAARLMDSAIAVYGLQTMAAHLRLLPERDAHGGLYEALSVMIVH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 G++ + EL++L +GFGLDL++C TG QDL +VSPKSG AV R GLP+ Sbjct: 121 LDDADAAGELVARFELLILDELGFGLDLSRCAATGTQQDLAYVSPKSGRAVSREAGLPWR 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +KML LP+FL D +++ AF+LT +F ++ + I R FL L + Sbjct: 181 DKMLALPAFLQRGSGLRADPGAVEDAFRLTGFFFTRHVYEPRAIEQPDARLGFLAALRK 239 >gi|13476445|ref|NP_108015.1| DNA repair protein RecO [Mesorhizobium loti MAFF303099] gi|20139624|sp|Q985A3|RECO_RHILO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|14027206|dbj|BAB54160.1| DNA repair protein; RecO [Mesorhizobium loti MAFF303099] Length = 253 Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats. Identities = 102/239 (42%), Positives = 150/239 (62%), Gaps = 1/239 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ IILG R +GE + ILEVMTR +GRHLG VR G+S + QP+LQ GN V + WR+ Sbjct: 1 MEWRDEGIILGTRKHGETSAILEVMTRAHGRHLGLVRGGRSRKQQPVLQPGNRVDLLWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F+ E +E + A+L+ S++ +YGLQ++ R LPER+ LY+ L++ + Sbjct: 61 RLDEHLGTFQAEAIEMNAARLMDSAVAVYGLQTMAAHLRLLPERDAHGGLYEALSVMIVH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 G++ + EL++L +GFGLDL++C TG QDL +VSPKSG AV R G P+ Sbjct: 121 LDDADAAGELVARFELLILDELGFGLDLSQCAATGTRQDLAYVSPKSGRAVSREAGAPWR 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +KML LP+FL D +++ AF+LT +F ++ + I R FL L + Sbjct: 181 DKMLALPAFLQRGSGLRADPAAVEDAFRLTGFFFTRHVYEPRAIEQPDARAGFLAALRK 239 >gi|90424142|ref|YP_532512.1| DNA repair protein RecO [Rhodopseudomonas palustris BisB18] gi|119361479|sp|Q214J3|RECO_RHOPB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|90106156|gb|ABD88193.1| DNA repair protein RecO [Rhodopseudomonas palustris BisB18] Length = 254 Score = 200 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 97/242 (40%), Positives = 139/242 (57%), Gaps = 3/242 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ I+LGVR +GE + I+E++TR +GRHLG VR G +++P+LQ GN V WR+ Sbjct: 1 MEWTDEGIVLGVRRHGESSAIVELLTRGHGRHLGLVRGGAGSKLRPLLQPGNSVSAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E A LL+SS +YG+ + L R LPER+P E+Y+ L L+ Sbjct: 61 RLDEHLGYYVLEGTRMRAAMLLASSHAVYGVTHLASLARLLPERDPQPEIYERLERTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ EL +L +GFGLDL C TGVT DL++VSPKSGGAV R+ G P+ Sbjct: 121 FDDVGEAAVHVIRFELTMLAELGFGLDLANCAATGVTSDLIYVSPKSGGAVSRAAGEPWR 180 Query: 181 EKMLVLPSFLWKEE---QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 +K+L LP FL + L+ F LT FL + L+ R+ F+ ++ Sbjct: 181 DKLLRLPPFLREGSAQRNDWSDQDLQDGFLLTGRFLLRNVLEPRGQGHSDARDGFINAVV 240 Query: 238 EL 239 L Sbjct: 241 RL 242 >gi|85716281|ref|ZP_01047255.1| DNA repair protein RecO [Nitrobacter sp. Nb-311A] gi|85696953|gb|EAQ34837.1| DNA repair protein RecO [Nitrobacter sp. Nb-311A] Length = 260 Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 98/241 (40%), Positives = 137/241 (56%), Gaps = 3/241 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+LGVR +GE + I+E++TR +GRHLG VR G RM+P+LQ GN V WR+ Sbjct: 1 MEWIDDGIVLGVRRHGESSAIVELLTRDHGRHLGLVRGGAGSRMRPLLQPGNSVNALWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E A LL+SS YG+ + L R LPER+P ++ ML L+ Sbjct: 61 RLDEHLGAYALEGTRMRAASLLASSHATYGVTHLAALARLLPERDPHEGIFTMLERTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ EL +L +GFGLDL+ C TGVT DL++VSPKSGGAV R G P+ Sbjct: 121 FDHAGGAAIHLIRFELAMLSELGFGLDLSACAATGVTGDLIYVSPKSGGAVSRQAGEPWR 180 Query: 181 EKMLVLPSFLW---KEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 +++L LP FL E+ L F+LT FL ++ L+ R F+ ++ Sbjct: 181 DRLLPLPPFLRASHDEQNGCSEQDLLDGFELTGRFLLRHVLEPRGQGHSDARAGFINAVV 240 Query: 238 E 238 Sbjct: 241 R 241 >gi|6655025|gb|AAF22872.1| recO-like protein [Bradyrhizobium japonicum] Length = 250 Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats. Identities = 96/240 (40%), Positives = 138/240 (57%), Gaps = 2/240 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ I+LGVR +GE + I+E++TR +GRHLG VR G RM+P+LQ GN V WR+ Sbjct: 1 MEWTDEGIVLGVRRHGESSAIVELLTRAHGRHLGLVRGGAGSRMRPLLQPGNSVTAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E L+ A LL+SS +YG+ + + R LPER+P E++ +L L+ Sbjct: 61 RLDEHLGTYAVEGLKLRAATLLASSHGVYGVTHLASIARLLPERDPHEEIFGLLEHSLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + EL +L +GFGL L C VTG T DL++VSPKSGGAV R G P+ Sbjct: 121 FDDIGSAAVHVIHFELAMLAELGFGLALDNCAVTGETTDLIYVSPKSGGAVSRGAGEPWR 180 Query: 181 EKMLVLPSFLW--KEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +++L LP FL + + L+ F+LT FL ++ L+ R F+ L Sbjct: 181 DRLLRLPPFLRHGETATELTDQDLQDGFRLTGLFLLRHVLEPRGQVHSDARAGFINALTR 240 >gi|27380169|ref|NP_771698.1| DNA repair protein RecO [Bradyrhizobium japonicum USDA 110] gi|30179751|sp|Q9RH67|RECO_BRAJA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|27353323|dbj|BAC50323.1| recO-like protein [Bradyrhizobium japonicum USDA 110] Length = 250 Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats. Identities = 96/240 (40%), Positives = 138/240 (57%), Gaps = 2/240 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ I+LGVR +GE + I+E++TR +GRHLG VR G RM+P+LQ GN V WR+ Sbjct: 1 MEWTDEGIVLGVRRHGESSAIVELLTRAHGRHLGLVRGGAGSRMRPLLQPGNSVSAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E L+ A LL+SS +YG+ + + R LPER+P E++ +L L+ Sbjct: 61 RLDEHLGTYAVEGLKLRAATLLASSHGVYGVTHLASIARLLPERDPHEEIFGLLEHSLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + EL +L +GFGL L C VTG T DL++VSPKSGGAV R G P+ Sbjct: 121 FDDIGSAAVHVIHFELAMLAELGFGLALDNCAVTGETTDLIYVSPKSGGAVSRGAGEPWR 180 Query: 181 EKMLVLPSFLW--KEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +++L LP FL + + L+ F+LT FL ++ L+ R F+ L Sbjct: 181 DRLLRLPPFLRHGETATELTDQDLQDGFRLTGLFLLRHVLEPRGQVHSDARAGFINALTR 240 >gi|149913474|ref|ZP_01902007.1| DNA repair protein RecO [Roseobacter sp. AzwK-3b] gi|149812594|gb|EDM72423.1| DNA repair protein RecO [Roseobacter sp. AzwK-3b] Length = 244 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 83/244 (34%), Positives = 127/244 (52%), Gaps = 6/244 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R++GE ++I+EV T ++GRH G VR G S ++ P+LQ G + + WR+ Sbjct: 1 MEWRDQGILLSTRTHGETSVIIEVFTPEHGRHAGVVRGGTSRKLAPVLQPGAQLDLRWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL ++G F E + S A + L L GL ++ L LP+RE LY L+ Sbjct: 61 RLEDHIGTFTVEPVRSRAAASMGDRLSLAGLNAVTALLLFCLPDREAHRRLYRRTEALLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVCRSVGLP 178 V ++ E+ LL +GFGLDL+ C V G DL +VSP+SG AV R+ Sbjct: 121 LLGQGDVWPLAYLNWEMALLDEMGFGLDLSGCAVMGPQANDLSYVSPRSGRAVSRAGAGE 180 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLGKL 236 +A+++L LP+ L DA + FQ+T +FL + L R+ F+ + Sbjct: 181 WADRLLPLPACLLGAGPAPDA-EVAEGFQVTGHFLQNH-LAPELGNKPLPAARQRFVDRF 238 Query: 237 LELI 240 + Sbjct: 239 RARL 242 >gi|319784500|ref|YP_004143976.1| DNA repair protein RecO [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170388|gb|ADV13926.1| DNA repair protein RecO [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 258 Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats. Identities = 104/239 (43%), Positives = 151/239 (63%), Gaps = 1/239 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ IILG R +GE + ILEV+TR +GRHLG VR G+S + QP+LQ GN V + WR+ Sbjct: 1 MEWRDEGIILGTRKHGETSAILEVLTRAHGRHLGLVRGGRSRKQQPVLQPGNRVDLLWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F+ E +E + A+L+ S++ +YGLQ++ R LPER+ LY+ L + + Sbjct: 61 RLDEHLGTFQAEAIEMNAARLMDSAVAVYGLQTMAAHLRLLPERDAHEGLYETLAVMIVH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V G++ + EL++L +GFGLDL++C TG QDL +VSPKSG AV R GLP+ Sbjct: 121 LDDADVAGELVARFELLVLDELGFGLDLSQCAATGTRQDLAYVSPKSGRAVSREAGLPWR 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 ++ML LP+FL DA + AF+LT +F N++ + I R FL L + Sbjct: 181 DRMLALPAFLQRGSGLRADAADVDDAFRLTGFFFNRHVYEPRGIEPPDARTGFLAALRK 239 >gi|254718804|ref|ZP_05180615.1| DNA repair protein RecO [Brucella sp. 83/13] gi|265983786|ref|ZP_06096521.1| DNA repair protein recO [Brucella sp. 83/13] gi|264662378|gb|EEZ32639.1| DNA repair protein recO [Brucella sp. 83/13] Length = 247 Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats. Identities = 101/241 (41%), Positives = 145/241 (60%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +ILG R +GE + I+EVMT +GRH+G VR G+S RMQP+LQ GN V V+W + Sbjct: 1 MEWRDEGVILGTRRHGETSAIVEVMTCGHGRHMGMVRGGRSRRMQPLLQPGNHVDVSWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 61 RLDEHMGTFTIEPLGFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL +C TG DL++VSPKSG AVCR G P+A Sbjct: 121 FDDPLAAGELLLRFEVMMLEELGFGLDLKECAATGRKDDLIYVSPKSGRAVCREAGAPWA 180 Query: 181 EKMLVLPSFLWKEEQTID-ADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +K+L LPSF+ D L AF +T YFL ++ + R FL + Sbjct: 181 DKLLALPSFVNDTALRASCYDDLDRAFTMTGYFLMRHVWEPRAQTPPDSRSGFLNAVGRA 240 Query: 240 I 240 I Sbjct: 241 I 241 >gi|162139842|ref|YP_318527.2| DNA repair protein RecO [Nitrobacter winogradskyi Nb-255] gi|119361470|sp|Q3SRB6|RECO_NITWN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 262 Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats. Identities = 97/241 (40%), Positives = 136/241 (56%), Gaps = 3/241 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+LGVR +GE + I+E++TR +GRHLG VR G RM+P+LQ GN V WR+ Sbjct: 1 MEWTDDGIVLGVRRHGESSAIVELLTRTHGRHLGLVRGGAGSRMRPLLQPGNSVSALWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E A LL+SS YG+ + L R LPER+P ++ ML L+ Sbjct: 61 RLDEHLGTYALEGTRMRAASLLASSHATYGVTHLAALARLLPERDPHEVIFAMLERTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ EL +L +GFGLDL+ C TG T DL++VSPKSGGAV R G P+ Sbjct: 121 FDRAGGAAIHLIRFELAMLSELGFGLDLSACAATGATGDLIYVSPKSGGAVSRQAGEPWR 180 Query: 181 EKMLVLPSFLW---KEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 +++L LP FL E+ L F+LT FL ++ L+ R F+ ++ Sbjct: 181 DRLLPLPPFLRVTHDEQDGWSEQDLLDGFELTGRFLLRHVLEPRGQGHSDARAGFINAVV 240 Query: 238 E 238 Sbjct: 241 R 241 >gi|74420976|gb|ABA05175.1| DNA replication and repair protein RecO [Nitrobacter winogradskyi Nb-255] Length = 278 Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats. Identities = 97/241 (40%), Positives = 136/241 (56%), Gaps = 3/241 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+LGVR +GE + I+E++TR +GRHLG VR G RM+P+LQ GN V WR+ Sbjct: 17 MEWTDDGIVLGVRRHGESSAIVELLTRTHGRHLGLVRGGAGSRMRPLLQPGNSVSALWRA 76 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E A LL+SS YG+ + L R LPER+P ++ ML L+ Sbjct: 77 RLDEHLGTYALEGTRMRAASLLASSHATYGVTHLAALARLLPERDPHEVIFAMLERTLDD 136 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ EL +L +GFGLDL+ C TG T DL++VSPKSGGAV R G P+ Sbjct: 137 FDRAGGAAIHLIRFELAMLSELGFGLDLSACAATGATGDLIYVSPKSGGAVSRQAGEPWR 196 Query: 181 EKMLVLPSFLW---KEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 +++L LP FL E+ L F+LT FL ++ L+ R F+ ++ Sbjct: 197 DRLLPLPPFLRVTHDEQDGWSEQDLLDGFELTGRFLLRHVLEPRGQGHSDARAGFINAVV 256 Query: 238 E 238 Sbjct: 257 R 257 >gi|90420864|ref|ZP_01228769.1| DNA repair protein recO [Aurantimonas manganoxydans SI85-9A1] gi|90334839|gb|EAS48611.1| DNA repair protein recO [Aurantimonas manganoxydans SI85-9A1] Length = 243 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 101/239 (42%), Positives = 150/239 (62%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+++AI+LGVR GE +++ EVMTR GRHLG VR G+S + QP+LQ GN V V+WR+ Sbjct: 1 MEWREEAIVLGVRRLGETSVVAEVMTRARGRHLGLVRGGRSRKQQPVLQPGNSVAVHWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E LE A+L+ S + L G+Q + R L ER+P LYD L I ++ Sbjct: 61 RLDEHMGAFVLEPLELRAARLMESGVGLNGVQLVAAHLRLLAERDPHARLYDGLQIIVDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P ++ ++ ++ E+ LL+ +GFGLDL +C TG DL +VSP++G AV R G P+ Sbjct: 121 LDRPELVAELMLRFEIALLEELGFGLDLERCAATGQRDDLAYVSPRTGRAVSRDAGAPWH 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +K+L LP+FL DA+SL + ++LT YFL ++ + I R FL L ++ Sbjct: 181 DKLLTLPAFLADAATASDAESLAAGYRLTGYFLGRHVYEPRGIDVPDARAGFLSALRKI 239 >gi|163842935|ref|YP_001627339.1| DNA repair protein RecO [Brucella suis ATCC 23445] gi|163673658|gb|ABY37769.1| DNA repair protein RecO [Brucella suis ATCC 23445] Length = 247 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 102/241 (42%), Positives = 145/241 (60%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +ILG R +GE + I+EVMT +GRH+G VR G+S RMQP+LQ GN V V+W + Sbjct: 1 MEWRDEGVILGTRRHGETSAIVEVMTCGHGRHMGMVRGGRSRRMQPLLQPGNHVDVSWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 61 RLDEHMGTFTIEPLSFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL +C TG DL++VSPKSG AVCR G P+A Sbjct: 121 FDDPLAAGELLLRFEVMMLEELGFGLDLKECAATGRKDDLIYVSPKSGRAVCREAGAPWA 180 Query: 181 EKMLVLPSFLWKEEQTID-ADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 EK+L LPSF+ D L AF +T YFL ++ + R FL + Sbjct: 181 EKLLSLPSFVNDTALRASCYDDLDRAFTMTGYFLMRHVWEPRAQTPPDSRSGFLNAVGRA 240 Query: 240 I 240 I Sbjct: 241 I 241 >gi|23501551|ref|NP_697678.1| DNA repair protein RecO [Brucella suis 1330] gi|62289624|ref|YP_221417.1| DNA repair protein RecO [Brucella abortus bv. 1 str. 9-941] gi|82699552|ref|YP_414126.1| DNA repair protein RecO [Brucella melitensis biovar Abortus 2308] gi|148559418|ref|YP_001258648.1| DNA repair protein RecO [Brucella ovis ATCC 25840] gi|161618634|ref|YP_001592521.1| DNA repair protein RecO [Brucella canis ATCC 23365] gi|189023877|ref|YP_001934645.1| DNA repair protein RecO [Brucella abortus S19] gi|225852185|ref|YP_002732418.1| DNA repair protein RecO [Brucella melitensis ATCC 23457] gi|237815119|ref|ZP_04594117.1| DNA repair protein RecO [Brucella abortus str. 2308 A] gi|254688939|ref|ZP_05152193.1| DNA repair protein RecO [Brucella abortus bv. 6 str. 870] gi|254693421|ref|ZP_05155249.1| DNA repair protein RecO [Brucella abortus bv. 3 str. Tulya] gi|254697074|ref|ZP_05158902.1| DNA repair protein RecO [Brucella abortus bv. 2 str. 86/8/59] gi|254701451|ref|ZP_05163279.1| DNA repair protein RecO [Brucella suis bv. 5 str. 513] gi|254703997|ref|ZP_05165825.1| DNA repair protein RecO [Brucella suis bv. 3 str. 686] gi|254707629|ref|ZP_05169457.1| DNA repair protein RecO [Brucella pinnipedialis M163/99/10] gi|254709789|ref|ZP_05171600.1| DNA repair protein RecO [Brucella pinnipedialis B2/94] gi|254713791|ref|ZP_05175602.1| DNA repair protein RecO [Brucella ceti M644/93/1] gi|254717152|ref|ZP_05178963.1| DNA repair protein RecO [Brucella ceti M13/05/1] gi|254729970|ref|ZP_05188548.1| DNA repair protein RecO [Brucella abortus bv. 4 str. 292] gi|256031279|ref|ZP_05444893.1| DNA repair protein RecO [Brucella pinnipedialis M292/94/1] gi|256060791|ref|ZP_05450953.1| DNA repair protein RecO [Brucella neotomae 5K33] gi|256113203|ref|ZP_05454071.1| DNA repair protein RecO [Brucella melitensis bv. 3 str. Ether] gi|256257187|ref|ZP_05462723.1| DNA repair protein RecO [Brucella abortus bv. 9 str. C68] gi|256264305|ref|ZP_05466837.1| recombination protein O [Brucella melitensis bv. 2 str. 63/9] gi|256369101|ref|YP_003106609.1| DNA repair protein RecO [Brucella microti CCM 4915] gi|260545621|ref|ZP_05821362.1| recombination protein O [Brucella abortus NCTC 8038] gi|260566756|ref|ZP_05837226.1| recombination protein O [Brucella suis bv. 4 str. 40] gi|260754426|ref|ZP_05866774.1| DNA repair protein recO [Brucella abortus bv. 6 str. 870] gi|260757645|ref|ZP_05869993.1| DNA repair protein recO [Brucella abortus bv. 4 str. 292] gi|260761472|ref|ZP_05873815.1| DNA repair protein recO [Brucella abortus bv. 2 str. 86/8/59] gi|260883454|ref|ZP_05895068.1| DNA repair protein recO [Brucella abortus bv. 9 str. C68] gi|261213672|ref|ZP_05927953.1| DNA repair protein recO [Brucella abortus bv. 3 str. Tulya] gi|261218967|ref|ZP_05933248.1| DNA repair protein recO [Brucella ceti M13/05/1] gi|261315121|ref|ZP_05954318.1| DNA repair protein recO [Brucella pinnipedialis M163/99/10] gi|261317324|ref|ZP_05956521.1| DNA repair protein recO [Brucella pinnipedialis B2/94] gi|261321534|ref|ZP_05960731.1| DNA repair protein recO [Brucella ceti M644/93/1] gi|261324782|ref|ZP_05963979.1| DNA repair protein recO [Brucella neotomae 5K33] gi|261751991|ref|ZP_05995700.1| DNA repair protein recO [Brucella suis bv. 5 str. 513] gi|261754650|ref|ZP_05998359.1| DNA repair protein recO [Brucella suis bv. 3 str. 686] gi|265988362|ref|ZP_06100919.1| DNA repair protein recO [Brucella pinnipedialis M292/94/1] gi|265994611|ref|ZP_06107168.1| DNA repair protein recO [Brucella melitensis bv. 3 str. Ether] gi|297248035|ref|ZP_06931753.1| DNA repair protein RecO [Brucella abortus bv. 5 str. B3196] gi|38258601|sp|Q8G1P8|RECO_BRUSU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|75497079|sp|Q57E78|RECO_BRUAB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361447|sp|Q2YMZ9|RECO_BRUA2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|23347462|gb|AAN29593.1| DNA repair protein RecO, putative [Brucella suis 1330] gi|62195756|gb|AAX74056.1| putatiave DNA repair protein RecO [Brucella abortus bv. 1 str. 9-941] gi|82615653|emb|CAJ10640.1| Cytochrome P450:Recombination protein O, RecO [Brucella melitensis biovar Abortus 2308] gi|148370675|gb|ABQ60654.1| DNA repair protein RecO [Brucella ovis ATCC 25840] gi|161335445|gb|ABX61750.1| DNA repair protein RecO [Brucella canis ATCC 23365] gi|189019449|gb|ACD72171.1| Recombination protein O, RecO [Brucella abortus S19] gi|225640550|gb|ACO00464.1| DNA repair protein RecO [Brucella melitensis ATCC 23457] gi|237789956|gb|EEP64166.1| DNA repair protein RecO [Brucella abortus str. 2308 A] gi|255999261|gb|ACU47660.1| DNA repair protein RecO [Brucella microti CCM 4915] gi|260097028|gb|EEW80903.1| recombination protein O [Brucella abortus NCTC 8038] gi|260156274|gb|EEW91354.1| recombination protein O [Brucella suis bv. 4 str. 40] gi|260667963|gb|EEX54903.1| DNA repair protein recO [Brucella abortus bv. 4 str. 292] gi|260671904|gb|EEX58725.1| DNA repair protein recO [Brucella abortus bv. 2 str. 86/8/59] gi|260674534|gb|EEX61355.1| DNA repair protein recO [Brucella abortus bv. 6 str. 870] gi|260872982|gb|EEX80051.1| DNA repair protein recO [Brucella abortus bv. 9 str. C68] gi|260915279|gb|EEX82140.1| DNA repair protein recO [Brucella abortus bv. 3 str. Tulya] gi|260924056|gb|EEX90624.1| DNA repair protein recO [Brucella ceti M13/05/1] gi|261294224|gb|EEX97720.1| DNA repair protein recO [Brucella ceti M644/93/1] gi|261296547|gb|EEY00044.1| DNA repair protein recO [Brucella pinnipedialis B2/94] gi|261300762|gb|EEY04259.1| DNA repair protein recO [Brucella neotomae 5K33] gi|261304147|gb|EEY07644.1| DNA repair protein recO [Brucella pinnipedialis M163/99/10] gi|261741744|gb|EEY29670.1| DNA repair protein recO [Brucella suis bv. 5 str. 513] gi|261744403|gb|EEY32329.1| DNA repair protein recO [Brucella suis bv. 3 str. 686] gi|262765724|gb|EEZ11513.1| DNA repair protein recO [Brucella melitensis bv. 3 str. Ether] gi|263094578|gb|EEZ18376.1| recombination protein O [Brucella melitensis bv. 2 str. 63/9] gi|264660559|gb|EEZ30820.1| DNA repair protein recO [Brucella pinnipedialis M292/94/1] gi|297175204|gb|EFH34551.1| DNA repair protein RecO [Brucella abortus bv. 5 str. B3196] gi|326408685|gb|ADZ65750.1| Recombination protein O, RecO [Brucella melitensis M28] gi|326538410|gb|ADZ86625.1| DNA repair protein RecO [Brucella melitensis M5-90] Length = 247 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 102/241 (42%), Positives = 145/241 (60%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +ILG R +GE + I+EVMT +GRH+G VR G+S RMQP+LQ GN V V+W + Sbjct: 1 MEWRDEGVILGTRRHGETSAIVEVMTCGHGRHMGMVRGGRSRRMQPLLQPGNHVDVSWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 61 RLDEHMGTFTIEPLSFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL +C TG DL++VSPKSG AVCR G P+A Sbjct: 121 FDDPLAAGELLLRFEVMMLEELGFGLDLKECAATGRKDDLIYVSPKSGRAVCREAGAPWA 180 Query: 181 EKMLVLPSFLWKEEQTID-ADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 EK+L LPSF+ D L AF +T YFL ++ + R FL + Sbjct: 181 EKLLSLPSFVNDTALRASCYDDLDRAFTMTGYFLMRHVWEPRAQTPPDSRSGFLNAVGRA 240 Query: 240 I 240 I Sbjct: 241 I 241 >gi|225627162|ref|ZP_03785200.1| DNA repair protein RecO [Brucella ceti str. Cudo] gi|256159389|ref|ZP_05457171.1| DNA repair protein RecO [Brucella ceti M490/95/1] gi|256254687|ref|ZP_05460223.1| DNA repair protein RecO [Brucella ceti B1/94] gi|260168417|ref|ZP_05755228.1| DNA repair protein RecO [Brucella sp. F5/99] gi|261221865|ref|ZP_05936146.1| DNA repair protein recO [Brucella ceti B1/94] gi|261757878|ref|ZP_06001587.1| recombination protein O [Brucella sp. F5/99] gi|265997829|ref|ZP_06110386.1| DNA repair protein recO [Brucella ceti M490/95/1] gi|225617997|gb|EEH15041.1| DNA repair protein RecO [Brucella ceti str. Cudo] gi|260920449|gb|EEX87102.1| DNA repair protein recO [Brucella ceti B1/94] gi|261737862|gb|EEY25858.1| recombination protein O [Brucella sp. F5/99] gi|262552297|gb|EEZ08287.1| DNA repair protein recO [Brucella ceti M490/95/1] Length = 247 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 102/241 (42%), Positives = 145/241 (60%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +ILG R +GE + I+EVMT +GRH+G VR G+S RMQP+LQ GN V V+W + Sbjct: 1 MEWRDEGVILGRRRHGETSAIVEVMTCGHGRHMGMVRGGRSRRMQPLLQPGNHVDVSWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 61 RLDEHMGTFTIEPLSFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL +C TG DL++VSPKSG AVCR G P+A Sbjct: 121 FDDPLAAGELLLRFEVMMLEELGFGLDLKECAATGRKDDLIYVSPKSGRAVCREAGAPWA 180 Query: 181 EKMLVLPSFLWKEEQTID-ADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 EK+L LPSF+ D L AF +T YFL ++ + R FL + Sbjct: 181 EKLLSLPSFVNDTALRASCYDDLDRAFTMTGYFLMRHVWEPRAQTPPDSRSGFLNAVGRA 240 Query: 240 I 240 I Sbjct: 241 I 241 >gi|294852027|ref|ZP_06792700.1| DNA repair protein RecO [Brucella sp. NVSL 07-0026] gi|294820616|gb|EFG37615.1| DNA repair protein RecO [Brucella sp. NVSL 07-0026] Length = 247 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 102/241 (42%), Positives = 145/241 (60%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +ILG R +GE + I+EVMT +GRH+G VR G+S RMQP+LQ GN V V+W + Sbjct: 1 MEWRDEGVILGTRRHGETSAIVEVMTCWHGRHMGMVRGGRSRRMQPLLQPGNHVDVSWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 61 RLDEHMGTFTIEPLSFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL +C TG DL++VSPKSG AVCR G P+A Sbjct: 121 FDDPLAAGELLLRFEVMMLEELGFGLDLKECAATGRKDDLIYVSPKSGRAVCREAGAPWA 180 Query: 181 EKMLVLPSFLWKEEQTID-ADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 EK+L LPSF+ D L AF +T YFL ++ + R FL + Sbjct: 181 EKLLSLPSFVNDTALRASCYDDLDRAFTMTGYFLMRHVWEPRAQTPPDSRSGFLNAVGRA 240 Query: 240 I 240 I Sbjct: 241 I 241 >gi|306842071|ref|ZP_07474743.1| DNA repair protein RecO [Brucella sp. BO2] gi|306287821|gb|EFM59244.1| DNA repair protein RecO [Brucella sp. BO2] Length = 247 Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 100/241 (41%), Positives = 144/241 (59%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +ILG R +GE + I+EVMT +GRH+G VR G+S RMQP+LQ GN V V+W + Sbjct: 1 MEWRDEGVILGTRRHGETSAIVEVMTCGHGRHMGMVRGGRSRRMQPLLQPGNHVDVSWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 61 RLDEHMGTFTIEPLGFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL +C TG L++VSPKSG AVCR G P+A Sbjct: 121 FDDPLAAGELLLRFEVMMLEELGFGLDLKECAATGRKDGLIYVSPKSGRAVCREAGAPWA 180 Query: 181 EKMLVLPSFLWKEEQTID-ADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +K+L LPSF+ D L AF +T YFL ++ + R FL + Sbjct: 181 DKLLALPSFVNDTALRASCYDDLDRAFTMTGYFLMRHVWEPRAQTPPDSRSGFLNAVGRA 240 Query: 240 I 240 I Sbjct: 241 I 241 >gi|86749733|ref|YP_486229.1| DNA repair protein RecO [Rhodopseudomonas palustris HaA2] gi|119361478|sp|Q2IWU2|RECO_RHOP2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|86572761|gb|ABD07318.1| DNA replication and repair protein RecO [Rhodopseudomonas palustris HaA2] Length = 249 Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 98/243 (40%), Positives = 142/243 (58%), Gaps = 3/243 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ IILGVR +GE I+E++TR +GRHLG VR G S R++P+LQ GN V WR+ Sbjct: 1 MEWSDEGIILGVRRHGEAGAIVELLTRGHGRHLGLVRGGASSRLRPLLQPGNSVLAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG ++ E A +L+SS +YG+ + L R LPER+P ++Y+ML L+ Sbjct: 61 RLDEHLGYYQLEGTRMRAATMLASSHAVYGITHLASLARLLPERDPHEDIYEMLERTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ EL +L +GFGLDL+ C TG T DL++VSPKSGGAV R+ G P+ Sbjct: 121 FDDVGDAATHLIRFELAMLAELGFGLDLSACAATGATTDLIYVSPKSGGAVSRTAGEPWR 180 Query: 181 EKMLVLPSFLWKEE---QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 EK+L LP FL ++ L+ F LT FL + L+ R+ F+ + Sbjct: 181 EKLLRLPDFLREDNDGRNGWSDQDLRDGFDLTGRFLLRNVLEPRGQGHSDARDGFINAVA 240 Query: 238 ELI 240 + + Sbjct: 241 KHL 243 >gi|17987568|ref|NP_540202.1| DNA repair protein RecO [Brucella melitensis bv. 1 str. 16M] gi|256044360|ref|ZP_05447264.1| DNA repair protein RecO [Brucella melitensis bv. 1 str. Rev.1] gi|260563712|ref|ZP_05834198.1| DNA repair protein recO [Brucella melitensis bv. 1 str. 16M] gi|265990775|ref|ZP_06103332.1| DNA repair protein recO [Brucella melitensis bv. 1 str. Rev.1] gi|20139477|sp|Q8YG76|RECO_BRUME RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|17983272|gb|AAL52466.1| DNA repair protein reco [Brucella melitensis bv. 1 str. 16M] gi|260153728|gb|EEW88820.1| DNA repair protein recO [Brucella melitensis bv. 1 str. 16M] gi|263001559|gb|EEZ14134.1| DNA repair protein recO [Brucella melitensis bv. 1 str. Rev.1] Length = 247 Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 101/241 (41%), Positives = 144/241 (59%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +ILG R +GE + I+EVMT +GRH+G VR G+S RMQP+LQ GN V V+W + Sbjct: 1 MEWRDEGVILGTRRHGETSAIVEVMTCGHGRHMGMVRGGRSRRMQPLLQPGNHVDVSWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + Sbjct: 61 RLDEHMGTFTIEPLSFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++ ++ E+M+L+ +GFGLDL +C TG DL++VSP SG AVCR G P+A Sbjct: 121 FDDPLAAGELLLRFEVMMLEELGFGLDLKECAATGRKDDLIYVSPTSGRAVCREAGAPWA 180 Query: 181 EKMLVLPSFLWKEEQTID-ADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 EK+L LPSF+ D L AF +T YFL ++ + R FL + Sbjct: 181 EKLLSLPSFVNDTALRASCYDDLDRAFTMTGYFLMRHVWEPRAQTPPDSRSGFLNAVGRA 240 Query: 240 I 240 I Sbjct: 241 I 241 >gi|115525024|ref|YP_781935.1| DNA repair protein RecO [Rhodopseudomonas palustris BisA53] gi|122295836|sp|Q07M79|RECO_RHOP5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|115518971|gb|ABJ06955.1| DNA repair protein RecO [Rhodopseudomonas palustris BisA53] Length = 258 Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 99/240 (41%), Positives = 142/240 (59%), Gaps = 2/240 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+LGVR +GE + I+E++TR +GRHLG VR G +++P+LQ GN V WR+ Sbjct: 1 MEWTDDGIVLGVRRHGESSAIVELLTRAHGRHLGLVRGGAGSKLRPVLQPGNSVHAGWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E + A LL+ YG+ + L R LPER+P E+Y+ + L Sbjct: 61 RLDEHLGYYALEGMRLRAATLLAVPHAAYGITHLAALARLLPERDPHPEMYETVERILED 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ G V+ EL +L +GFGLDL+ C TGVT DL++VSPKSGGAV R+ G P+ Sbjct: 121 FDDATMAGAHLVRFELAMLGELGFGLDLSACAATGVTSDLIYVSPKSGGAVSRTAGEPWR 180 Query: 181 EKMLVLPSFLWKEEQT--IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +K+L LP FL ++E AD L+ F LT FL + L+ R+ F+ + Sbjct: 181 DKLLRLPPFLREDEDAAGCTADDLRDGFALTGRFLLRNVLEPRGQGHSDARDGFINAVTR 240 >gi|114765537|ref|ZP_01444645.1| DNA repair protein RecO [Pelagibaca bermudensis HTCC2601] gi|114542130|gb|EAU45162.1| DNA repair protein RecO [Roseovarius sp. HTCC2601] Length = 242 Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 80/241 (33%), Positives = 119/241 (49%), Gaps = 5/241 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE + ILEV T ++GRH+G +R G S ++ P LQ G + + WR+ Sbjct: 1 MDWRDTGILLSTRRHGETSAILEVFTAEHGRHMGVLRGGTSRKIAPSLQPGAQLDLTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL ++G + E S A +S L L GL ++V L LPERE LY L+ Sbjct: 61 RLEDHMGAWTVEPQRSRAASAMSDRLSLAGLNAVVALLSFCLPEREAHPALYARTESLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ E+ LL +GFGLDL+ C VTG + L +VSP++G AV + Sbjct: 121 LLAERELWPLAYMRWEMALLDEMGFGLDLSACAVTGTNEPLDYVSPRTGRAVSAFGAGDW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLGKLL 237 ++L LP + D + A + T +FL L R FL +L Sbjct: 181 VARLLPLPPVMLGRGSAPD-GEILDALRTTGHFLENR-LAPALGDRPLPAARGLFLDRLA 238 Query: 238 E 238 Sbjct: 239 R 239 >gi|146341374|ref|YP_001206422.1| DNA repair protein RecO [Bradyrhizobium sp. ORS278] gi|166221887|sp|A4YWC5|RECO_BRASO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|146194180|emb|CAL78201.1| putative DNA repair protein RecO (Recombination protein O) [Bradyrhizobium sp. ORS278] Length = 248 Score = 195 bits (494), Expect = 6e-48, Method: Composition-based stats. Identities = 96/241 (39%), Positives = 141/241 (58%), Gaps = 2/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+LG+R +GE + ++E++TR++GRHLG VR RM+P+LQ GN VR WR+ Sbjct: 1 MEWTDDGIVLGLRRHGESSAVVELLTREHGRHLGLVRGAAGKRMRPVLQPGNTVRAIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + + L A+L+S+S YG+ + L R LPER+P ++Y L L+ Sbjct: 61 RLDEHLGMYAVDGLTLRAAELMSASHGAYGVTHLASLARLLPERDPHEDMYFRLEHALDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V+ EL +L +GFGLDL C TG T DL++VSPKSGGAV R+ G P+A Sbjct: 121 FADAGAAAAHIVRFELAILTELGFGLDLESCAATGETSDLIYVSPKSGGAVSRTAGAPWA 180 Query: 181 EKMLVLPSFLWKEEQT--IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +++L LP FL + ++ L F+LT FL ++ L+ RE F+ + Sbjct: 181 DRLLPLPPFLRESDEDHGWSDQDLLDGFRLTGLFLLRHVLEPRGQGHSDAREGFINAVTR 240 Query: 239 L 239 Sbjct: 241 A 241 >gi|192291353|ref|YP_001991958.1| DNA repair protein RecO [Rhodopseudomonas palustris TIE-1] gi|238692599|sp|B3QJH7|RECO_RHOPT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|192285102|gb|ACF01483.1| DNA repair protein RecO [Rhodopseudomonas palustris TIE-1] Length = 250 Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats. Identities = 98/244 (40%), Positives = 139/244 (56%), Gaps = 4/244 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ IILGVR +GE I+E++TR +GRHLG VR G S RM+P+LQ GN V +WR+ Sbjct: 1 MEWSDEGIILGVRRHGESAAIVELLTRGHGRHLGMVRGGASARMRPLLQPGNSVLASWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG ++ E + A LL SS +YG+ + L R LPER+P E+Y L + L+ Sbjct: 61 RLDEHLGYYQLEATKMRAATLLGSSHAVYGVTHLASLARLLPERDPHEEIYQRLVLTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V ++ EL +L +GFGLDL+ C TG T +L++VSPKSG AV RS G P+ Sbjct: 121 FDDFGVAAAHLIRFELAILAELGFGLDLSACAATGSTTELIYVSPKSGSAVSRSAGEPWR 180 Query: 181 EKMLVLPSFLWK----EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +++L LP+FL L F+LT FL + L+ R F+ + Sbjct: 181 DRLLRLPAFLRDDEAESGNGWSGQDLFDGFELTGRFLLRNVLEPRGQSHSDARAGFINAI 240 Query: 237 LELI 240 + Sbjct: 241 TRAL 244 >gi|254512349|ref|ZP_05124416.1| DNA repair protein RecO [Rhodobacteraceae bacterium KLH11] gi|221536060|gb|EEE39048.1| DNA repair protein RecO [Rhodobacteraceae bacterium KLH11] Length = 241 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 93/243 (38%), Positives = 130/243 (53%), Gaps = 5/243 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE I+EV T +GRH G VR G S ++ PILQ G + V WR+ Sbjct: 1 MDWRDHGILLTARRHGETAAIIEVFTEGHGRHAGVVRGGTSRKIAPILQPGAQLDVLWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL +++G F+ E L S A S L L GL ++V L LPEREP +Y ++ Sbjct: 61 RLEEHIGTFQVEPLRSRAAAAFSGRLALAGLNAVVALLSFCLPEREPHPAIYKQTEQLMD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 V +++ EL LL+ +GFGLDL+ C VTGVT L++VSPK+G AV R+ + Sbjct: 121 LLGQDEVWPLAYLRWELALLEELGFGLDLSACAVTGVTDGLVYVSPKTGRAVSRAGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLGKLL 237 A+K+L LP L E DA + A + T YFL + L R F+ + Sbjct: 181 ADKLLPLPPCLRGEGAAPDAG-IAEALRTTGYFLENH-LAPSLGHTPLPDARARFVAQFT 238 Query: 238 ELI 240 + Sbjct: 239 RRL 241 >gi|39935766|ref|NP_948042.1| DNA repair protein RecO [Rhodopseudomonas palustris CGA009] gi|61215044|sp|Q6N6B8|RECO_RHOPA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|39649619|emb|CAE28141.1| putative DNA repair protein RecO [Rhodopseudomonas palustris CGA009] Length = 250 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 98/244 (40%), Positives = 139/244 (56%), Gaps = 4/244 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ IILGVR +GE I+E++TR +GRHLG VR G S RM+P+LQ GN V +WR+ Sbjct: 1 MEWSDEGIILGVRRHGESAAIVELLTRGHGRHLGMVRGGASARMRPLLQPGNSVLASWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG ++ E + A LL SS +YG+ + L R LPER+P E+Y L + L+ Sbjct: 61 RLDEHLGYYQLEATKMRAATLLGSSHAVYGVTHLASLARLLPERDPHEEIYQRLVLTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V ++ EL +L +GFGLDL+ C TG T +L++VSPKSG AV RS G P+ Sbjct: 121 FDDFGVAAAHLIRFELAILAELGFGLDLSACAATGSTTELIYVSPKSGSAVSRSAGEPWR 180 Query: 181 EKMLVLPSFLWK----EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +++L LP+FL L F+LT FL + L+ R F+ + Sbjct: 181 DRLLRLPAFLRDDEAESGHGWSGQDLFDGFELTGRFLLRNVLEPRGQSHSDARAGFINAI 240 Query: 237 LELI 240 + Sbjct: 241 TRAL 244 >gi|91977125|ref|YP_569784.1| DNA repair protein RecO [Rhodopseudomonas palustris BisB5] gi|119361480|sp|Q136V6|RECO_RHOPS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|91683581|gb|ABE39883.1| DNA replication and repair protein RecO [Rhodopseudomonas palustris BisB5] Length = 249 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 96/243 (39%), Positives = 140/243 (57%), Gaps = 3/243 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ IILGVR +GE I+E++TR +GRHLG VR G S RM+P+LQ GN V WR+ Sbjct: 1 MEWSDEGIILGVRRHGEAGAIVELLTRSHGRHLGLVRGGASSRMRPLLQPGNSVLAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG ++ E A +L+SS +YG+ + L R LPER+P ++Y+ML L+ Sbjct: 61 RLDEHLGYYQLEGTRMRAATMLASSHAVYGVTHLASLARLLPERDPHEDIYEMLERTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ EL +L +GFGLDL+ C TG T +L++VSPKSG AV R+ G P+ Sbjct: 121 FDDVGDAATHLIRFELAMLAELGFGLDLSACAATGATVELIYVSPKSGSAVSRAAGEPWR 180 Query: 181 EKMLVLPSFLWKEE---QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 +K+L LP+FL + L+ F LT FL + L+ R+ F+ + Sbjct: 181 DKLLRLPAFLRDDNDGRNGWSDQDLRDGFDLTGRFLLRNVLEPRGQGHSDARDGFINAVT 240 Query: 238 ELI 240 + Sbjct: 241 RHL 243 >gi|163760593|ref|ZP_02167674.1| DNA repair protein [Hoeflea phototrophica DFL-43] gi|162282208|gb|EDQ32498.1| DNA repair protein [Hoeflea phototrophica DFL-43] Length = 256 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 101/241 (41%), Positives = 160/241 (66%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ IILG+R +GE ++I EVMT +GRH+G VR G+S R+QP+LQ GN V + WR+ Sbjct: 1 MEWRDEGIILGLRKHGETSVIAEVMTHAHGRHMGIVRGGRSKRLQPVLQPGNSVDLVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG+++ E++ + +L+ S++ ++G+Q++ L R LPER+ L+D + L+ Sbjct: 61 RLDEHLGQYQVELINARAGRLMQSAIGVHGVQAMAALLRLLPERDSHPRLHDAFAVILDS 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G ++V+ EL +L+++GFGLDLT C TG ++DL++VSPKSG AV + G P+A Sbjct: 121 FDAPEEAGALYVRFELAVLEDLGFGLDLTACAATGASEDLVYVSPKSGRAVSAAAGAPWA 180 Query: 181 EKMLVLPSFLWKEEQTI-DADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 E+ML LP+FL Q DA L F+L+ YFL+++ + I + RE+F L+ Sbjct: 181 ERMLALPAFLADRSQACGDAQMLAHGFKLSGYFLDRHVFEPRGIEAPISRESFCTAALKA 240 Query: 240 I 240 + Sbjct: 241 M 241 >gi|92117771|ref|YP_577500.1| DNA repair protein RecO [Nitrobacter hamburgensis X14] gi|119361468|sp|Q1QL57|RECO_NITHX RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|91800665|gb|ABE63040.1| DNA replication and repair protein RecO [Nitrobacter hamburgensis X14] Length = 253 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 94/241 (39%), Positives = 138/241 (57%), Gaps = 3/241 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+LGVR +GE + I+E++TR +GRHLG VR G RM+P+LQ GN V WR+ Sbjct: 1 MEWTDDGIVLGVRRHGESSAIVELLTRGHGRHLGLVRGGAGSRMRPLLQPGNSVSALWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E A LL +S YG+ + L R LPER+P +++ L L+ Sbjct: 61 RLDEHLGAYALEGTRMRAANLLGASHATYGVTHLASLARLLPERDPHDGIFERLERTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ EL +L +GFGLDL+ CV TG T +L++VSPKSGGAV R G P+ Sbjct: 121 FDTAGEAAIHLIRFELAMLTELGFGLDLSTCVATGTTTELIYVSPKSGGAVSRQAGEPWR 180 Query: 181 EKMLVLPSFLWKEEQT---IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 +++L LP FL + ++ L F+LT FL ++ L+ R F+ ++ Sbjct: 181 DRLLRLPPFLREADEEQSGWSDQDLLDGFELTGRFLLRHVLEPRGQGHSDARAGFINAVV 240 Query: 238 E 238 + Sbjct: 241 K 241 >gi|240850199|ref|YP_002971592.1| DNA repair protein RecO [Bartonella grahamii as4aup] gi|240267322|gb|ACS50910.1| DNA repair protein RecO [Bartonella grahamii as4aup] Length = 248 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 100/239 (41%), Positives = 147/239 (61%), Gaps = 1/239 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ A+ILG R YGE ++ILEVMTR++GR++G V+ G+S RM +LQ GN V W + Sbjct: 1 MKWKEQAVILGTRQYGETSVILEVMTREHGRYMGVVKGGRSRRMAALLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG FR E L+ H A+L+ LY LQ I R LPER+P LYD+L++F+ Sbjct: 61 RLEEHLGLFRLEALDLHAARLICLPEALYALQLIAFHLRLLPERDPHPVLYDILHLFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P V ++ V+ E+ LL+ +GFGLDL+ C TG + L +VSPKSG AVC G P+ Sbjct: 121 FDEPFVNAELLVRFEMRLLEELGFGLDLSCCAATGRQERLHYVSPKSGRAVCEEAGEPWK 180 Query: 181 EKMLVLPSFLWKE-EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +K+L+LP FL + + D+ + + F LT +FL ++ + I +R N + Sbjct: 181 KKLLILPQFLVQRTTRPTDSSDIINGFILTGFFLMRHVWEPRDIKQPSVRMNLIQLFER 239 >gi|148256029|ref|YP_001240614.1| DNA repair protein RecO [Bradyrhizobium sp. BTAi1] gi|166221886|sp|A5EKL4|RECO_BRASB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|146408202|gb|ABQ36708.1| DNA replication and repair protein RecO [Bradyrhizobium sp. BTAi1] Length = 248 Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats. Identities = 99/241 (41%), Positives = 139/241 (57%), Gaps = 2/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+LG+R +GE + +LE++TR++GRHLG VR RM+P+LQ GN VR WR+ Sbjct: 1 MEWTDDGIVLGLRRHGESSAVLELLTREHGRHLGLVRGASGARMRPMLQPGNTVRAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + + L A+L+S + YG+ + L R LPER+P E+Y L L+ Sbjct: 61 RLDEHLGMYAIDGLTLRAAELMSVAHGAYGVTHLAALARLLPERDPHQEMYLRLEHALDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V+ EL +L +GFGLDL C TG T DL++VSPKSGGAV RS G P+A Sbjct: 121 FAEAGGAAVHIVRFELAILAELGFGLDLESCAATGETTDLVYVSPKSGGAVSRSAGAPWA 180 Query: 181 EKMLVLPSFLWKEEQT--IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +++L LP FL + E L F+LT FL ++ L+ RE F+ + Sbjct: 181 DRLLPLPPFLRESEDDHGFSDQDLLDGFRLTGLFLLRHVLEPRGQGHSDAREGFINAVTR 240 Query: 239 L 239 Sbjct: 241 A 241 >gi|254469353|ref|ZP_05082758.1| DNA repair protein RecO [Pseudovibrio sp. JE062] gi|211961188|gb|EEA96383.1| DNA repair protein RecO [Pseudovibrio sp. JE062] Length = 253 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 102/244 (41%), Positives = 147/244 (60%), Gaps = 6/244 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQ + I++G R GE NI+LEV+T GR LG VR G+S R QP LQ GN + + WR+ Sbjct: 1 MQWQAEGIVIGTRKQGENNILLEVLTPDRGRCLGLVRGGRSRRQQPALQLGNHLNLTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F E L+ A L+ ++ ++GLQS+ R LPER+P L+ L++ L+ Sbjct: 61 RLDEHLGFFTVEPLQLRAAHLMQTARAIHGLQSLCAQIRLLPERDPHPNLFHALDVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P + + ++ EL LL +GFGLDLT+C TG T +L+WVSPKSG AVC++ G PYA Sbjct: 121 LEDPQIGAALVLRFELELLNELGFGLDLTECAATGATDELIWVSPKSGRAVCKTAGQPYA 180 Query: 181 EKMLVLPSFL------WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 K+L LP FL + I +++ F LT YFL KY + I R++++ Sbjct: 181 SKLLTLPEFLKAPQARLSQNIQISKGDMEAGFSLTGYFLFKYIYEPRSIPWPPARDSYVT 240 Query: 235 KLLE 238 L + Sbjct: 241 ALKK 244 >gi|316934141|ref|YP_004109123.1| DNA repair protein RecO [Rhodopseudomonas palustris DX-1] gi|315601855|gb|ADU44390.1| DNA repair protein RecO [Rhodopseudomonas palustris DX-1] Length = 250 Score = 191 bits (484), Expect = 8e-47, Method: Composition-based stats. Identities = 96/244 (39%), Positives = 138/244 (56%), Gaps = 4/244 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ IILGVR +GE I+E++TR +GRHLG VR S RM+P+LQ GN V +WR+ Sbjct: 1 MDWSDEGIILGVRRHGEAGAIVELLTRSHGRHLGMVRGAASARMRPLLQPGNSVLASWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG ++ E + A LL+SS +YG+ + L R LPER+P E+Y L + L+ Sbjct: 61 RLDEHLGYYQLEATKMRAATLLASSHAVYGVTHLASLARLLPERDPHEEIYHRLILTLDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + ++ EL +L +GFGLDL+ C TG T +L++VSPKSG AV R G P+ Sbjct: 121 FDDLGIAAAHLIRFELAILAELGFGLDLSACAATGATTELIYVSPKSGSAVSRIAGEPWR 180 Query: 181 EKMLVLPSFLWKEEQT----IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +++L LP FL +E L F LT FL + L+ R F+ + Sbjct: 181 DRLLRLPPFLRDDEAASESGWSGQDLFDGFALTGRFLLRNVLEPRGQGHSDARAGFINAV 240 Query: 237 LELI 240 + Sbjct: 241 TRAL 244 >gi|86135730|ref|ZP_01054309.1| DNA repair protein RecO [Roseobacter sp. MED193] gi|85826604|gb|EAQ46800.1| DNA repair protein RecO [Roseobacter sp. MED193] Length = 244 Score = 191 bits (484), Expect = 8e-47, Method: Composition-based stats. Identities = 79/243 (32%), Positives = 123/243 (50%), Gaps = 5/243 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE I++V T +GRH G V G S + P+LQ G + + WR+ Sbjct: 1 MEWRDHGILLTRRRHGEGAAIIDVFTEHHGRHAGIVHGGASRKKAPVLQPGAQLDLLWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLN 119 RL ++LG ++ E L S A LS L L GL ++ L LPER +LY L+ Sbjct: 61 RLQEHLGSYQAEPLRSRAAAALSGRLALAGLNAVTGLLGFCLPERAAYPDLYKQSEQLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + +++ E+ LL +GFGLDL+ C V+G +DL ++SPK+G AV R + Sbjct: 121 LLEQEEIWPLAYLRWEMALLAAMGFGLDLSACAVSGSNEDLAYISPKTGRAVSRQEAGQW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN--IIHCHLLRENFLGKLL 237 ++L LP L + D + + T +FL++ L N R F+ + Sbjct: 181 VNRLLPLPPVLRGLGEAPD-HEVAEGLRTTGFFLSER-LAPNLGNQPLPEARGRFIDAFM 238 Query: 238 ELI 240 + Sbjct: 239 RRL 241 >gi|254450984|ref|ZP_05064421.1| DNA repair protein RecO [Octadecabacter antarcticus 238] gi|198265390|gb|EDY89660.1| DNA repair protein RecO [Octadecabacter antarcticus 238] Length = 242 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 79/242 (32%), Positives = 127/242 (52%), Gaps = 4/242 (1%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M W+D+ ++ VR +GE + I+EV T G G VR G S ++ P LQ G + V W+ Sbjct: 1 MIEWRDEGALIRVRKHGESSAIIEVFTPSRGLTAGIVRGGTSRKIAPTLQPGAQLDVTWK 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFL 118 +RL +LG F E + S A+++ L L GL ++ L F LP+RE +LY L Sbjct: 61 ARLEDHLGSFTVEPIRSRTAQVMQDRLALAGLNAVTGLLSFLLPDREAHAQLYARTIQLL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + V ++Q E+ LL +GFG+DL+ C V+G+ DL +VSP++G AV R Sbjct: 121 DLLGQNDVWPLAYLQWEIALLDEMGFGMDLSACAVSGLNDDLFYVSPRTGRAVSRLAAGE 180 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH-NIIHCHLLRENFLGKLL 237 +A+++L LP L + D + + A + T +FLN + + + R+ + + Sbjct: 181 WADRLLPLPHVLLGKGDA-DLNEIVLALRTTGHFLNNHLAKSLGNLPIPEARQRLIDAMK 239 Query: 238 EL 239 L Sbjct: 240 RL 241 >gi|254466686|ref|ZP_05080097.1| DNA repair protein RecO [Rhodobacterales bacterium Y4I] gi|206687594|gb|EDZ48076.1| DNA repair protein RecO [Rhodobacterales bacterium Y4I] Length = 241 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 88/243 (36%), Positives = 125/243 (51%), Gaps = 5/243 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L VR +GE + I++V T +GRH G VR G RM PILQ G + V WR+ Sbjct: 1 MEWRDHGILLSVRRHGESSAIIDVFTEGHGRHAGVVRGGAGRRMAPILQPGAQLDVTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL +LG + E L S A LS L L GL ++ L LPEREP +LY L+ Sbjct: 61 RLEDHLGSYHAEPLRSRAAAALSGRLALAGLNTVTALLSFCLPEREPHPDLYTRSEQLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ EL LL+ +GFGLDL+ C VTG L ++SPK+G AV R + Sbjct: 121 LLGNEDLWPLAYLRWELALLEEMGFGLDLSACAVTGSRFGLAYISPKTGRAVSREGAGDW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLGKLL 237 A+++L LP + + DA + A + T +FL + L R + L Sbjct: 181 ADRLLPLPPVMLGQGSAADA-EIVQALRATGFFLEAH-LAPSLGNHPLPEARGRLMDLLS 238 Query: 238 ELI 240 + Sbjct: 239 RRL 241 >gi|254485777|ref|ZP_05098982.1| DNA repair protein RecO [Roseobacter sp. GAI101] gi|214042646|gb|EEB83284.1| DNA repair protein RecO [Roseobacter sp. GAI101] Length = 241 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 92/242 (38%), Positives = 127/242 (52%), Gaps = 3/242 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE + I+EV T GRH G VR G S ++ PILQ G + V WR+ Sbjct: 1 MEWRDQGILLSARRHGETSAIIEVFTPTQGRHAGIVRGGTSRKIAPILQPGAQLDVAWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL ++G F E + S +S L L GL ++ L LPEREP LY L+ Sbjct: 61 RLEGHIGAFTVEPVRSRAVSAMSDRLSLAGLNTVTALLSFCLPEREPHPPLYHRTQALLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + ++Q EL LL+ +G+GLDLT C VTG T L++VSPKSG AV R + Sbjct: 121 LLDQGDLWPLAYLQWELSLLEEMGYGLDLTACAVTGATDALVFVSPKSGRAVTREGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH-NIIHCHLLRENFLGKLLE 238 A+KML LP L E + D D + F+ T YFL ++ ++ R ++ Sbjct: 181 ADKMLPLPPVLLGEGEARD-DEILQGFKTTGYFLEQHLARNLGGRPLPEARARYVDAFSR 239 Query: 239 LI 240 I Sbjct: 240 QI 241 >gi|85705116|ref|ZP_01036216.1| DNA repair protein RecO [Roseovarius sp. 217] gi|85670438|gb|EAQ25299.1| DNA repair protein RecO [Roseovarius sp. 217] Length = 244 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 81/239 (33%), Positives = 118/239 (49%), Gaps = 5/239 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE +I+EV T + GRH G VR G S +M PILQ G + + WR+ Sbjct: 1 MDWRDQGILLSSRRHGESAVIIEVFTPERGRHAGVVRGGASRKMAPILQPGAQLDLEWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++G FR E + S L + L LPERE LY+ L+ Sbjct: 61 RLEDHIGTFRVEPVRSRAGVLGNPLTLAGLNAVCALLLFALPEREAHGALYERTETLLDL 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVCRSVGLPY 179 V ++ EL LL+++GFGLDL+ C V G DL ++SP++G AV R+ + Sbjct: 121 LAESEVWPLAYLHWELALLEDLGFGLDLSTCAVMGEKANDLSYISPRTGRAVSRAGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLGKL 236 +K+L LP L DA + +T +FL + L RE F+ ++ Sbjct: 181 VDKLLPLPPCLMGHGPAPDA-EILQGLTVTGHFL-RTHLAPQMRNKPLPEARERFVARM 237 >gi|158423630|ref|YP_001524922.1| recombination protein O [Azorhizobium caulinodans ORS 571] gi|158330519|dbj|BAF88004.1| recombination protein O [Azorhizobium caulinodans ORS 571] Length = 245 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 92/240 (38%), Positives = 134/240 (55%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D I+LGVR +GE + I+++MTR+ GRH G VR G S R+ +LQ GN + WR+ Sbjct: 1 MEWTDAGIVLGVRRHGETSAIVDLMTRERGRHAGLVRGGGSRRLAALLQPGNTLHATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL LG E L ++ S+ +G+ +V L R LPER+P L+ L+ L+ Sbjct: 61 RLEGQLGLMTVEPLTLRSDAIMRSAHGSFGVTHLVGLMRLLPERDPHPGLFASLDAILDA 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++ + E+ LL +GFGLDLT C TG DL +VSP+SG AV RS G PYA Sbjct: 121 FDEPAHAGELLARFEMALLVELGFGLDLTTCAATGGNNDLAYVSPRSGRAVSRSAGEPYA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 +K+ LP+FL ++ A ++T +FL+ L+ + R +FL L + Sbjct: 181 DKLFGLPTFLIGGIVPPSLPDMEEALRMTGFFLSTRVLEPRGLALGEARASFLAALRRAL 240 >gi|163744852|ref|ZP_02152212.1| DNA repair protein RecO [Oceanibulbus indolifex HEL-45] gi|161381670|gb|EDQ06079.1| DNA repair protein RecO [Oceanibulbus indolifex HEL-45] Length = 240 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 83/242 (34%), Positives = 120/242 (49%), Gaps = 4/242 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE + I+EV T + GRH G VR G S ++ P LQ G + + WR+ Sbjct: 1 MEWRDQGILLSARRHGETSAIIEVFTPEQGRHAGIVRGGTSRKIAPSLQPGAQLDLAWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL ++G F E L S A + L L GL ++ L LPEREP LY L+ Sbjct: 61 RLEDHIGAFTVEPLRSRAAVAMQDRLALAGLNAVTALLSFCLPEREPHPALYRRTETLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 V +++ EL LL+ +G+ LDL C VTGV++DL++VSPKSG AV + Sbjct: 121 MLGQGDVWPLAYLKWELRLLEEMGYALDLESCAVTGVSEDLIYVSPKSGRAVSAKGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH-NIIHCHLLRENFLGKLLE 238 AE++L LP+ L + T +FL + + R F+ Sbjct: 181 AERLLPLPAVL--RGGAGSDAEIAQGLVTTGHFLTAHLARDLGGKPLPESRARFIDAFSR 238 Query: 239 LI 240 + Sbjct: 239 RL 240 >gi|56698028|ref|YP_168399.1| DNA repair protein RecO [Ruegeria pomeroyi DSS-3] gi|61214680|sp|Q5LNK7|RECO_SILPO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|56679765|gb|AAV96431.1| DNA repair protein RecO, putative [Ruegeria pomeroyi DSS-3] Length = 241 Score = 190 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 89/241 (36%), Positives = 123/241 (51%), Gaps = 3/241 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L VR +GE + I++ T +GRH G VR G S R+ PILQ G + ++WR+ Sbjct: 1 MDWRDQGILLAVRRHGETSAIIDTFTASHGRHAGVVRGGTSRRIAPILQPGAQLDLSWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL +LG F E L S A +S L L GL ++V L LPERE LY L+ Sbjct: 61 RLEDHLGSFTVEPLRSRAAAAMSGRLALAGLNAVVSLLSFCLPEREAHPRLYKQSEQLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ EL LL +GFGLDL+ C VTG + DL++VSP+SG AV + Sbjct: 121 LLGQDEIWPLAYLRWELALLDTLGFGLDLSSCAVTGNSDDLVYVSPRSGRAVSAGAAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYAL-QHNIIHCHLLRENFLGKLLE 238 AE++L LP L E D + A + T +FL R L + Sbjct: 181 AERLLPLPPCLRGEGPAPDP-EIAQALRTTGHFLEHRVAPALGHAPLPQARGRLLDLISR 239 Query: 239 L 239 L Sbjct: 240 L 240 >gi|114705890|ref|ZP_01438793.1| DNA repair protein RecO [Fulvimarina pelagi HTCC2506] gi|114538736|gb|EAU41857.1| DNA repair protein RecO [Fulvimarina pelagi HTCC2506] Length = 241 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 92/236 (38%), Positives = 147/236 (62%), Gaps = 1/236 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+++ ++LGVR +GE ++I E+MTR GRHLG VR G+S M+P+LQ GN V +WR+ Sbjct: 1 MEWREEGVVLGVRRHGETSVIAELMTRSRGRHLGLVRGGRSKAMRPVLQPGNSVMAHWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E + S L+ S++ L+G+Q R L ER+P LYD L + + Sbjct: 61 RLDEHMGAFALEPVASRAGGLMESTVGLHGVQLAASHLRLLAERDPHPRLYDGLIVLIEN 120 Query: 121 HKIPSVIG-KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + ++ ++ EL +L+ +GFGLDL +C +G +DL++VSPKSG AV R G PY Sbjct: 121 LNADRLTAGELMLRFELAVLEELGFGLDLARCAASGTKEDLVYVSPKSGRAVSREPGEPY 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 +K+L LP+FL ++ D ++L++ F LT YFL+++ + + R +F+ Sbjct: 181 HDKLLALPAFLTDTDRAADGETLRTGFTLTRYFLSRHVYEPRGLDEPHSRTSFISA 236 >gi|121601946|ref|YP_988791.1| DNA repair protein RecO [Bartonella bacilliformis KC583] gi|166221884|sp|A1US38|RECO_BARBK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|120614123|gb|ABM44724.1| DNA repair protein RecO [Bartonella bacilliformis KC583] Length = 245 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 102/239 (42%), Positives = 150/239 (62%), Gaps = 1/239 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ AIILG R YGE ++ILEV+TRQ+GR++G V+ G+S RM +LQ GN V W + Sbjct: 1 MKWKEQAIILGARQYGETSVILEVVTRQHGRYMGVVKGGRSRRMAALLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F+ E L+ ++L+ LYGLQ + FR LPER+P LYD+L++F+ Sbjct: 61 RLDEHLGLFKLEALDLCASRLMFLPEALYGLQLMASHFRLLPERDPHPILYDILHLFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V ++ V+ E+ LL+ +GFGLDL+ C VTG + L +VSPKSG AVC VGLP+ Sbjct: 121 FDEQFVNAELLVRFEMRLLEELGFGLDLSHCAVTGRQEKLYYVSPKSGRAVCEEVGLPWK 180 Query: 181 EKMLVLPSFLWKEEQ-TIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 K+L+LP FL + +D D +++ F LTD+FL ++ + I +R + Sbjct: 181 NKLLLLPKFLIERTNRPVDFDDIRNGFTLTDFFLTRHVWEPRGIKQPSVRAILIQLFER 239 >gi|260432760|ref|ZP_05786731.1| DNA repair protein RecO [Silicibacter lacuscaerulensis ITI-1157] gi|260416588|gb|EEX09847.1| DNA repair protein RecO [Silicibacter lacuscaerulensis ITI-1157] Length = 241 Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 88/242 (36%), Positives = 127/242 (52%), Gaps = 3/242 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE I+EV T +GRH G VR G S ++ PILQ G + V WR+ Sbjct: 1 MDWRDHGILLTARRHGETAAIIEVFTETHGRHAGVVRGGASRKIAPILQPGAQLDVLWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL +++G F+ E L S A S L L GL ++V L FLPEREP +Y ++ Sbjct: 61 RLQEHIGTFQVEPLRSRAAAAFSGRLALSGLNAVVALLSFFLPEREPHPGIYRQTEQLMD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ EL LL+ +GFGLDLT+C VTG T+ L +VSPK+G AV + Sbjct: 121 LLGQDEIWPLAYLRWELALLEELGFGLDLTRCAVTGTTEGLAYVSPKTGRAVSAEGAGDW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYAL-QHNIIHCHLLRENFLGKLLE 238 A+++L LP L + D D + + + T YFL R F+ + Sbjct: 181 ADRLLPLPPVLRGQGGAPD-DEIAAGLRTTGYFLAHRVAPSLGHTPLPEARARFVDQFTR 239 Query: 239 LI 240 + Sbjct: 240 RL 241 >gi|299135099|ref|ZP_07028290.1| DNA repair protein RecO [Afipia sp. 1NLS2] gi|298590076|gb|EFI50280.1| DNA repair protein RecO [Afipia sp. 1NLS2] Length = 249 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 92/241 (38%), Positives = 133/241 (55%), Gaps = 3/241 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ IILG R +GE + I+E++TR +GRHLG VR G RM+P+LQ GN V WR+ Sbjct: 1 MEWTDEGIILGTRRHGESSAIVELLTRSHGRHLGLVRGGAGTRMRPLLQPGNSVSAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E + A +L+ YG+ + L R LPER P +Y++L L+ Sbjct: 61 RLDEHLGYYAIEGTQLRAATMLACPHAAYGITHLAALARLLPERAPHDGIYELLEAILDD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P V V+ E+ +L +GFGLDL+ C TG DL++VSPKSG AV R+ G P+ Sbjct: 121 FDEPVVAATHVVRFEMAMLDELGFGLDLSSCAATGAQADLIYVSPKSGCAVSRAAGEPWR 180 Query: 181 EKMLVLPSFLWKEEQT---IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 E++L LP FL + + F+LT FL + L+ R+ F+ + Sbjct: 181 ERLLPLPPFLRAGHEDSGAETERDMMEGFRLTGLFLLRNVLEPRGQGHSDARDGFIAAVA 240 Query: 238 E 238 Sbjct: 241 R 241 >gi|254461391|ref|ZP_05074807.1| DNA repair protein RecO [Rhodobacterales bacterium HTCC2083] gi|206677980|gb|EDZ42467.1| DNA repair protein RecO [Rhodobacteraceae bacterium HTCC2083] Length = 244 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 89/243 (36%), Positives = 129/243 (53%), Gaps = 5/243 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L VR +GE N I++V T ++GRH G VR G S ++ PILQ G + V+WR+ Sbjct: 1 MEWRDQGILLSVRRHGETNAIIDVFTIEHGRHAGIVRGGTSRKIAPILQPGAQLDVSWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +LG + E L S A L L L GL ++ L F LPERE LY L+ Sbjct: 61 RLEDHLGTYTVEPLRSRAAAALGDRLSLAGLNAVTALLAFALPEREANTRLYKQSEQLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 V +++ E+ LL+ G GLDL+ C VTG ++L+++SP++G AV V P+ Sbjct: 121 LLGQHEVWPLAYLRFEMALLEACGMGLDLSACAVTGTNENLIYISPRTGRAVSEQVAGPW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLGKLL 237 K+L LP L + DA ++ A + T YFL++ L R ++ Sbjct: 181 VNKLLPLPPILIGQGMGSDA-EIEQALRTTGYFLSQK-LAPSLGNRSLPEARGRYVDLFS 238 Query: 238 ELI 240 LI Sbjct: 239 RLI 241 >gi|254476248|ref|ZP_05089634.1| DNA repair protein RecO [Ruegeria sp. R11] gi|214030491|gb|EEB71326.1| DNA repair protein RecO [Ruegeria sp. R11] Length = 241 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 81/241 (33%), Positives = 128/241 (53%), Gaps = 5/241 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L +R +GE + I+++ T ++GRH G +R G S +M PILQ G + + WR+ Sbjct: 1 MEWRDQGILLRMRRHGEGSAIVDMFTAEHGRHAGVIRGGASRKMAPILQPGAQLDLLWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL +LG ++ E++ S LS L L GL ++ L LP+REP +LY L+ Sbjct: 61 RLEDHLGSYQAELMRSRAGAALSGRLALAGLNAVTGLLAFCLPDREPHPDLYLRSERLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + ++Q E+ LL+ +GFGLDL+ C V+G +L+++SPKSG AV R+ + Sbjct: 121 LLGQDEIWPLAYLQWEMALLEELGFGLDLSCCAVSGALDELIYISPKSGRAVSRASAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLGKLL 237 A ++L LP+ + E + + T +FL + L R FL L Sbjct: 181 AHRLLPLPAVMRGEGEAGT-GEILQGLSTTGFFLE-HRLAPSLGNTPLPEARGRFLDVLT 238 Query: 238 E 238 Sbjct: 239 R 239 >gi|49475306|ref|YP_033347.1| DNA repair protein RecO [Bartonella henselae str. Houston-1] gi|61215010|sp|Q6G457|RECO_BARHE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|49238112|emb|CAF27319.1| DNA repair protein reco [Bartonella henselae str. Houston-1] Length = 256 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 101/239 (42%), Positives = 148/239 (61%), Gaps = 1/239 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ AIILG R YGE ++ILEVMTRQ+GR++G V+ G+S RM +LQ GN V W + Sbjct: 1 MKWKEQAIILGTRQYGETSVILEVMTRQHGRYMGVVKGGRSRRMAVLLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG FR E L+ H A+L+ LY LQ IV LPER+P LYD+L++F+ Sbjct: 61 RLDEHLGLFRLEALDLHAARLILFPEALYALQLIVFHLHLLPERDPHPILYDILHLFMQS 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + ++ V+ E+ L+ +GFGLDL++C TG + L +VSPKSG AVC G P+ Sbjct: 121 FDEPFINAELLVRFEMRFLEELGFGLDLSRCAATGRLEKLCYVSPKSGRAVCEEAGHPWR 180 Query: 181 EKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 EK+L LP FL + + +D +K+ F LT +FL ++ + I +R + + + Sbjct: 181 EKLLNLPQFLVQRTVRPVDFSDIKNGFILTGFFLMRHVWEPRNIKQPSVRISLIQLFEQ 239 >gi|218461899|ref|ZP_03501990.1| DNA repair protein RecO [Rhizobium etli Kim 5] Length = 256 Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats. Identities = 113/241 (46%), Positives = 161/241 (66%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILGV+ +GE ++I+EVMTR GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 1 MQWQDHAIILGVKRHGETSVIVEVMTRDRGRHLGLVRSGRSRAMQPVLQPGNAVEVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 61 RLDEHLGEFRVEPVTLRAARLMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++FV+ EL +L ++GFGLDL +C TG DL +VSPKSG AV RS G P+A Sbjct: 121 LHNPADAGELFVRFELAVLNDLGFGLDLAECAATGARSDLAYVSPKSGRAVSRSAGAPWA 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML+LP FL D DSL +AF+LT +FL+++ + + R+ F+ L+ Sbjct: 181 DKMLLLPPFLGVDGNHAADFDSLAAAFRLTGFFLHRHVYEPRGMEASAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|110633306|ref|YP_673514.1| DNA repair protein RecO [Mesorhizobium sp. BNC1] gi|119361464|sp|Q11JS6|RECO_MESSB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|110284290|gb|ABG62349.1| DNA replication and repair protein RecO [Chelativorans sp. BNC1] Length = 248 Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats. Identities = 100/241 (41%), Positives = 147/241 (60%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ I+LG R +GE ++ILE +T +GRHLG VR G+S RMQP+LQ GN V + WR+ Sbjct: 1 MEWHDEGIVLGTRRHGESSVILEAITAAHGRHLGLVRGGRSKRMQPVLQPGNRVDLTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F+ E LE + A+LL+S++ +YG+Q + R LPER+P L++ L + Sbjct: 61 RLDEHLGLFQVEPLELNAARLLNSAVAIYGIQLLAAHLRLLPERDPHPGLFEALGVIAAH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G + + EL +L +GFGLDL +C VTG +DL +VSPK+G AV R G P+A Sbjct: 121 LDEPETAGVLVARFELAVLDALGFGLDLARCAVTGSREDLAYVSPKTGRAVTREAGAPWA 180 Query: 181 EKMLVLPSFLWKEEQT-IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +K+L LP+FL + D L AF LT +F ++ + + R FL ++ Sbjct: 181 DKLLPLPTFLTAGNEALYDRAILSQAFALTGFFFARHVYEPRGLTEPEARAGFLAAVMRN 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|83855024|ref|ZP_00948554.1| DNA repair protein RecO [Sulfitobacter sp. NAS-14.1] gi|83842867|gb|EAP82034.1| DNA repair protein RecO [Sulfitobacter sp. NAS-14.1] Length = 245 Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats. Identities = 86/240 (35%), Positives = 123/240 (51%), Gaps = 3/240 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE + I+EV T + GRH G VR G S ++ PILQ G + + WR+ Sbjct: 1 MEWRDQGILLSARRHGETSAIIEVFTPERGRHAGIVRGGTSRKIAPILQPGAQLDIAWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++G F E + S A + L L GL ++ L F LPERE LY L+ Sbjct: 61 RLEDHIGAFTVEPVRSRAALAMHDRLSLAGLNAVTGLLAFALPEREAHPPLYRRTEALLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + ++Q E+ LL +G+GLDL+ C VTG T L++VSPK+G AV R + Sbjct: 121 LLGQGDLWPLAYLQWEISLLDELGYGLDLSACAVTGRTSGLVFVSPKTGRAVTREGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNI-IHCHLLRENFLGKLLE 238 +KML L L E DA + AF+ T YFL ++ + R ++ Sbjct: 181 VDKMLPLSPVLRGEGDASDA-DIALAFKTTGYFLERHLARDLGDKPLPEARARYVEAFSR 239 >gi|149200802|ref|ZP_01877777.1| DNA repair protein RecO [Roseovarius sp. TM1035] gi|149145135|gb|EDM33161.1| DNA repair protein RecO [Roseovarius sp. TM1035] Length = 244 Score = 188 bits (476), Expect = 7e-46, Method: Composition-based stats. Identities = 80/239 (33%), Positives = 119/239 (49%), Gaps = 5/239 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE ++I+EV T + GRH G VR G S +M P+LQ G + + WR+ Sbjct: 1 MDWRDQGILLNSRRHGESSVIIEVFTPERGRHAGVVRGGASRKMAPVLQPGAQLDLEWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++G FR E L+S + L LPERE ELY I L+ Sbjct: 61 RLEDHIGTFRVEPLKSRAWTMGDRMALAGLNAVCALLLFVLPEREAHAELYRKTLILLDI 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVCRSVGLPY 179 P + ++ E+ LL+ +GFGLDL +C V G DL ++SPK+G AV R+ + Sbjct: 121 LDQPEIWTLAYLNWEMALLEEMGFGLDLRRCAVLGEKANDLSYISPKTGRAVSRAGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLGKL 236 A+++L LP L D + F++T FL + L R ++ + Sbjct: 181 ADRLLPLPPCLMGHGPAPD-GEILQGFEVTGQFL-RNHLAPQLGNRPLPEARARYVARF 237 >gi|209884979|ref|YP_002288836.1| DNA repair protein RecO [Oligotropha carboxidovorans OM5] gi|229470366|sp|B6JGG5|RECO_OLICO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|209873175|gb|ACI92971.1| DNA repair protein RecO [Oligotropha carboxidovorans OM5] Length = 249 Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats. Identities = 96/241 (39%), Positives = 132/241 (54%), Gaps = 3/241 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD IILG R +GE N I+E++TR +GRHLG VR G RM+P+LQ GN V WR+ Sbjct: 1 MEWTDDGIILGTRRHGEANAIVELLTRSHGRHLGLVRGGAGTRMRPLLQPGNSVGAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E A +LS S YG+ + L R LPER P +Y+ L Sbjct: 61 RLDEHLGYYALEGTRLRAATMLSYSHAAYGITHLAALARLLPERAPHDGIYEQFEAILED 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + V+ E+ +L+ +GFGLDL+ C TG DL++VSPKSG AV RS G P+ Sbjct: 121 FDDPVIAATHVVRFEMAMLEELGFGLDLSCCAATGTHTDLIYVSPKSGCAVSRSAGEPWR 180 Query: 181 EKMLVLPSFLWKEEQTIDAD---SLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 E++L LP+FL + D + F+LT FL + L+ R F+ + Sbjct: 181 ERLLPLPAFLRAGNEESSPDGEADIMEGFRLTGMFLLRNVLEPRGQAHSDARAGFIAAVA 240 Query: 238 E 238 Sbjct: 241 R 241 >gi|49474068|ref|YP_032110.1| DNA repair protein RecO [Bartonella quintana str. Toulouse] gi|61215004|sp|Q6G080|RECO_BARQU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|49239572|emb|CAF25929.1| DNA repair protein recO [Bartonella quintana str. Toulouse] Length = 243 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 101/239 (42%), Positives = 145/239 (60%), Gaps = 1/239 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ A+ILG R YGE +IILEVMTRQ+GR++G V+ G S RM +LQ GN V W + Sbjct: 1 MKWKEQAVILGTRQYGETSIILEVMTRQHGRYMGIVKGGHSRRMAGLLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG FR E L+ + A+L+ LY LQ IV R LPER+P LYD+L++F+ Sbjct: 61 RLDEHLGLFRLEALDLYAARLILLPEALYALQLIVFHLRLLPERDPYPSLYDILHLFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V ++ V+ E+ LL+ +GFGLDL++C TG + L +VSPKSG AVC G P+ Sbjct: 121 FDESFVNAELLVRFEMRLLEELGFGLDLSRCAATGRQERLFYVSPKSGRAVCEEAGRPWK 180 Query: 181 EKMLVLPSFLWKEEQ-TIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 EK+L LP FL + ++ + + F LT +FL ++ + I +R N + Sbjct: 181 EKLLTLPQFLVRRAIRPVNFSDIINGFILTGFFLMRHVWEPRGIKQPSVRVNLIQLFER 239 >gi|86357032|ref|YP_468924.1| DNA repair protein RecO [Rhizobium etli CFN 42] gi|119361475|sp|Q2KAD9|RECO_RHIEC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|86281134|gb|ABC90197.1| DNA repair protein [Rhizobium etli CFN 42] Length = 256 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 113/241 (46%), Positives = 161/241 (66%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILGV+ +GE ++I EVMTR GRHLG VR+G+S M+P+LQ GN V V WR+ Sbjct: 1 MQWQDQAIILGVKRHGETSVIAEVMTRGRGRHLGLVRSGRSRAMRPVLQPGNAVEVVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 61 RLDEHLGEFRVEPVTLRAARLMDTATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++FV+ EL +L ++GFGLDL +C TG DL +VSPKSG AV RS G P+A Sbjct: 121 LHNPADAGELFVRFELAVLNDLGFGLDLAECAATGARSDLAYVSPKSGRAVSRSAGAPWA 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML+LP FL + D DSL +AF+LT +FL+++ + I R+ F+ L+ Sbjct: 181 DKMLLLPPFLGVEGNHAADVDSLAAAFRLTGFFLHRHVYEPRGIEAVAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|222085393|ref|YP_002543923.1| DNA repair protein RecO [Agrobacterium radiobacter K84] gi|254790503|sp|B9JC76|RECO_AGRRK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|221722841|gb|ACM25997.1| DNA repair protein RecO [Agrobacterium radiobacter K84] Length = 259 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 113/241 (46%), Positives = 161/241 (66%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILGV+ GE ++I EVMTR GRH+G VR+G+S MQP+LQ GNLV V WR+ Sbjct: 1 MQWQDHAIILGVKRLGETSVIAEVMTRDRGRHMGLVRSGRSRSMQPVLQPGNLVEVTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P LYD L++ L Sbjct: 61 RLHEHLGEFRMEPVRLRAARLMETATAVYGVQAMGALLRLLPERDPHPYLYDALDVILEN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P G++FV+ EL +L +G+GLDL +C TGV DL +VSPK+G AVCR+ G P+A Sbjct: 121 MQNPMDAGELFVRFELAVLNELGYGLDLGECAATGVRDDLAFVSPKTGRAVCRTAGAPWA 180 Query: 181 EKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML LP FL + + +SL +AF+LT +FL+++ + I RE F+ L+ Sbjct: 181 DKMLALPPFLAAGTVEAANGESLAAAFRLTGFFLHRHVYEPRGIEIAAAREGFIQAALKA 240 Query: 240 I 240 + Sbjct: 241 V 241 >gi|221234572|ref|YP_002517008.1| DNA repair protein RecO [Caulobacter crescentus NA1000] gi|254790515|sp|B8GVD0|RECO_CAUCN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|220963744|gb|ACL95100.1| DNA repair protein recO [Caulobacter crescentus NA1000] Length = 243 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 74/240 (30%), Positives = 117/240 (48%), Gaps = 1/240 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+A +L RS+GE I+E++T G+ V S RM+P LQ G V V +R+ Sbjct: 1 MEWEDEAYVLSARSHGETGAIVELLTEARGKVAAHVAGAASRRMKPFLQPGARVIVRYRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREP-CLELYDMLNIFLN 119 ++ LG E + + L L L GL + + + L + Sbjct: 61 KVEGQLGSATLEPMGEGPSSLFDDRLALAGLSAAAAVAAAALPEREAHPGAFHALEALIR 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 +IP + ++V+ E LL+ +GFGLDL+KC TG DL++VSP++G AV R G PY Sbjct: 121 VLEIPEIWPAVYVRYEAGLLQELGFGLDLSKCAATGAFDDLVYVSPRTGRAVSREAGKPY 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +K+L LP F+ + + +K+ +T +FL ++ R L +L E Sbjct: 181 HDKLLPLPPFMLSSQGGLAEGDVKAGLDITGHFLEQFVFGPLNRPLPPARLWLLDRLAEA 240 >gi|126739720|ref|ZP_01755412.1| DNA repair protein RecO [Roseobacter sp. SK209-2-6] gi|126719366|gb|EBA16076.1| DNA repair protein RecO [Roseobacter sp. SK209-2-6] Length = 251 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 81/242 (33%), Positives = 124/242 (51%), Gaps = 5/242 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 W+D I+L R +GE + I++V T ++GRH G VR G S R+ PILQ G + + WR+R Sbjct: 12 EWRDHGILLSARRHGESSAIIDVFTEEHGRHAGVVRGGASRRLAPILQPGAQLDLLWRAR 71 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLNC 120 L ++LG ++ E L S +S L L GL ++ L LPEREP LY L+ Sbjct: 72 LEEHLGSYQAEPLRSRAVAAMSGRLALSGLNAVTALLGFCLPEREPHPALYASSERLLDL 131 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + +++ E+ LL+ +GFGLDL C V+G ++L +VSP++G AV R P+ Sbjct: 132 LEQEELWPLAYLRWEMELLEEMGFGLDLLACAVSGRNEELAYVSPRTGRAVSRQEAGPWV 191 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLGKLLE 238 ++L LP + + + D + + T YFL L R FL Sbjct: 192 ARLLPLPPVMLGKGEAPD-HEIAEGLKTTGYFLETR-LAPALGNRPLPEARGRFLDAFSR 249 Query: 239 LI 240 + Sbjct: 250 RL 251 >gi|83941547|ref|ZP_00954009.1| DNA repair protein RecO, putative [Sulfitobacter sp. EE-36] gi|83847367|gb|EAP85242.1| DNA repair protein RecO, putative [Sulfitobacter sp. EE-36] Length = 245 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 86/240 (35%), Positives = 123/240 (51%), Gaps = 3/240 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE + I+EV T + GRH G VR G S ++ PILQ G + + WR+ Sbjct: 1 MEWRDQGILLSARRHGETSAIIEVFTPERGRHAGIVRGGTSRKIAPILQPGAQLDIAWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++G F E + S A + L L GL ++ L F LPERE LY L+ Sbjct: 61 RLEDHIGAFTVEPVRSRAALAMHDRLSLAGLNAVTGLLAFALPEREAHAPLYRRTEALLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + ++Q E+ LL +G+GLDL+ C VTG T L++VSPK+G AV R + Sbjct: 121 LLGQGDLWPLAYLQWEISLLDELGYGLDLSACAVTGRTSGLVFVSPKTGRAVTREGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNI-IHCHLLRENFLGKLLE 238 +KML L L E DA + AF+ T YFL ++ + R ++ Sbjct: 181 VDKMLPLSPVLRGEGDASDA-DIALAFKTTGYFLERHLARDLGDKPLPEARARYVEAFSR 239 >gi|110678689|ref|YP_681696.1| DNA repair protein RecO [Roseobacter denitrificans OCh 114] gi|119361483|sp|Q16AI3|RECO_ROSDO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|109454805|gb|ABG31010.1| DNA repair protein RecO [Roseobacter denitrificans OCh 114] Length = 241 Score = 186 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 81/242 (33%), Positives = 120/242 (49%), Gaps = 3/242 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+++ I+L R +GE I+EV T +GRH G VR G S ++ PILQ G + + WR+ Sbjct: 1 MEWREEGILLSTRRHGESAAIIEVFTPSHGRHAGVVRGGTSRKIAPILQPGAQLDLTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLN 119 RL ++G F E + S A + L L GL ++ L LPERE LY L+ Sbjct: 61 RLEDHIGSFLVEPVRSRAAAAMGDRLALAGLNAVTALLGFCLPEREAHRPLYVETERLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ E+ LL ++G+ L L C VTG DL++VSPKSG AV + Sbjct: 121 LLGEGEIWPLAYLRWEVQLLHDMGYALALEACAVTGQRDDLIYVSPKSGRAVSAKGAGDW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH-NIIHCHLLRENFLGKLLE 238 A+++L LP L DA + AF T YFL ++ + R F+ Sbjct: 181 ADRLLPLPPILRGIGGGPDA-EIAQAFITTGYFLTEHLARDLGGKPLPEARARFVETFSR 239 Query: 239 LI 240 + Sbjct: 240 RL 241 >gi|241203893|ref|YP_002974989.1| DNA repair protein RecO [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857783|gb|ACS55450.1| DNA repair protein RecO [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 256 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 113/241 (46%), Positives = 164/241 (68%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILGV+ +GE ++I+EVMTR GRHLG VR+G+S MQP+LQAGN V V WR+ Sbjct: 1 MQWQDHAIILGVKRHGETSVIVEVMTRDRGRHLGLVRSGRSRAMQPVLQAGNAVEVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 61 RLDEHLGEFRVEPVTLRAARLMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++FV+ EL +L ++GFGLDL +C TG DL++VSPKSG AV R+ G P+A Sbjct: 121 LHNPADAGELFVRFELAVLNDLGFGLDLAECAATGARSDLVYVSPKSGRAVSRAAGAPWA 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML+LP FL + D +SL +AF+LT +FL+++ + I R+ F+ L+ Sbjct: 181 DKMLLLPPFLRIEGNHAADFESLSAAFRLTGFFLHRHVYEPRGIEAVAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|254436668|ref|ZP_05050162.1| DNA repair protein RecO [Octadecabacter antarcticus 307] gi|198252114|gb|EDY76428.1| DNA repair protein RecO [Octadecabacter antarcticus 307] Length = 242 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 79/242 (32%), Positives = 125/242 (51%), Gaps = 4/242 (1%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M W+D+ ++ VR +GE + I+EV T G G VR G S ++ P LQ G + V W+ Sbjct: 1 MIEWRDEGALVRVRKHGESSAIIEVFTASRGLTAGIVRGGTSRKIAPTLQPGAQLDVTWK 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFL 118 +RL +LG F E + S A+++ L L GL ++ L F LP+RE LY L Sbjct: 61 ARLEDHLGSFTVEPIRSRTAQVMQDRLALAGLNAVTGLLSFLLPDREAHAPLYARTIQLL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + V ++Q E+ LL +GFG+DL+ C V+G+ DL +VSP++G AV R Sbjct: 121 DLLGQNDVWPLAYLQWEVALLDEMGFGMDLSACAVSGLNDDLFYVSPRTGRAVSRLAAGE 180 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNI-IHCHLLRENFLGKLL 237 +A+++L LP L + D + + A + T +FLN + + R+ + + Sbjct: 181 WADRLLPLPHVLLGKGDA-DLNEIVLALRTTGHFLNNHLAKSLGDRPIPEARQRLIDAMK 239 Query: 238 EL 239 L Sbjct: 240 RL 241 >gi|300023747|ref|YP_003756358.1| DNA repair protein RecO [Hyphomicrobium denitrificans ATCC 51888] gi|299525568|gb|ADJ24037.1| DNA repair protein RecO [Hyphomicrobium denitrificans ATCC 51888] Length = 239 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 90/237 (37%), Positives = 131/237 (55%), Gaps = 1/237 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+AI+L V+ +GE ++E+ TR +GRHLG V G+S R++PILQ GN V W++ Sbjct: 1 MQWTDEAIVLSVKPHGETAAVIELWTRTHGRHLGLVHGGRSRRLRPILQPGNHVDATWKA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL+ LG E+ + A+ L + L L ++ L LPER+P LY++ L Sbjct: 61 RLSDQLGHVTIEMRRAFAAETLDDAAALAALSTLTTLTHLLPERDPHPNLYEITLFVLGF 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 +V + V+ EL LL+ +GFGLDL++C TG L++VSP++G AV S G PY Sbjct: 121 LNDATVWPALLVRWELALLEELGFGLDLSQCAATGSNDQLIYVSPRTGRAVSASAGEPYR 180 Query: 181 EKMLVLPSFLWKE-EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +K+L LP+FL K + D ++ F LT +FL L R L L Sbjct: 181 DKLLPLPAFLTKHRSGHVTEDDIRLGFALTGHFLETRVLLPRGQSLPQPRSRLLAHL 237 >gi|163867994|ref|YP_001609198.1| DNA repair protein RecO [Bartonella tribocorum CIP 105476] gi|189039650|sp|A9IRN6|RECO_BART1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|161017645|emb|CAK01203.1| DNA repair protein RecO [Bartonella tribocorum CIP 105476] Length = 248 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 101/239 (42%), Positives = 146/239 (61%), Gaps = 1/239 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ A+ILGVR YGE ++ILE++TR+ GR++G V+ G+S RM +LQ GN V W + Sbjct: 1 MKWKEQAVILGVRQYGETSVILEIITRERGRYMGVVKGGRSRRMAALLQPGNFVEAEWSA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG FR E L+ H A+L+ LY LQ I R LPER+P LYD+L++F+ Sbjct: 61 RLEEHLGLFRLEALDFHAARLICLPEALYALQLIAFHLRLLPERDPHPVLYDILHLFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P V ++ V+ E+ LL+ +GFGLDL+ C TG Q L +VSPKSG AVC G P+ Sbjct: 121 FDEPFVNAELLVRFEMRLLEELGFGLDLSCCAATGRKQKLYYVSPKSGRAVCEEAGEPWK 180 Query: 181 EKMLVLPSFLWKE-EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +K+L+LP FL + + D + + F LT +FL +Y + I +R N + Sbjct: 181 KKLLILPQFLVQRATRPADFRDIINGFNLTSFFLMRYVWEPRDIKQPSVRTNLIQLFER 239 >gi|126728495|ref|ZP_01744311.1| DNA repair protein RecO [Sagittula stellata E-37] gi|126711460|gb|EBA10510.1| DNA repair protein RecO [Sagittula stellata E-37] Length = 241 Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats. Identities = 83/241 (34%), Positives = 124/241 (51%), Gaps = 5/241 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L R +GE ++IL+V T + GRH G +R G S +M P LQ G + ++WR+ Sbjct: 1 MEWRDTGILLATRRHGETSLILDVFTPERGRHSGVLRGGTSRKMAPHLQPGAQLDLSWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL ++G F E S A+ L L L GL ++V L R LPER P +LY L+ Sbjct: 61 RLEDHMGAFTVEPQRSRAAQALGDRLALAGLNAVVALLRFCLPERVPHPDLYTFSEQLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 P + +++ E+ LL+ +GF LDL+ C VTG T+ L++VSPKSG AV + Sbjct: 121 LLDQPDLWPLAYLRWEMALLEEMGFALDLSCCAVTGRTEGLVYVSPKSGRAVTAEGAGNW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLGKLL 237 +L LP + D + +A T YFL + L R + ++ Sbjct: 181 VHHLLPLPEVMLGRGAA-DNPEVATALGTTGYFLE-HRLAPQMGDKPVPEARARLIERIR 238 Query: 238 E 238 + Sbjct: 239 Q 239 >gi|327191326|gb|EGE58359.1| DNA repair protein (recombination protein O) [Rhizobium etli CNPAF512] Length = 281 Score = 185 bits (468), Expect = 6e-45, Method: Composition-based stats. Identities = 112/241 (46%), Positives = 161/241 (66%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILG++ +GE ++I EVMTR GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 26 MQWQDHAIILGIKRHGETSVIAEVMTRDRGRHLGLVRSGRSRAMQPVLQPGNAVEVIWRA 85 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 86 RLDEHLGEFRVEPVTLRAARLMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 145 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++FV+ EL +L ++GFGLDL +C TG DL +VSPKSG AV RS G P+A Sbjct: 146 LHNPADAGELFVRFELAVLNDLGFGLDLGECAATGARSDLAYVSPKSGRAVSRSAGAPWA 205 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML+LP FL + D DSL +AF+LT +FL+++ + + R+ F+ L+ Sbjct: 206 DKMLLLPPFLGVEGNHAADFDSLAAAFRLTGFFLHRHVYEPRGMEAAAARDGFVQAALKA 265 Query: 240 I 240 + Sbjct: 266 L 266 >gi|218509904|ref|ZP_03507782.1| DNA repair protein RecO [Rhizobium etli Brasil 5] Length = 245 Score = 185 bits (468), Expect = 6e-45, Method: Composition-based stats. Identities = 112/241 (46%), Positives = 161/241 (66%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILG++ +GE ++I EVMTR GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 1 MQWQDHAIILGIKRHGETSVIAEVMTRDRGRHLGLVRSGRSRAMQPVLQPGNAVEVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 61 RLDEHLGEFRVEPVTLRAARLMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++FV+ EL +L ++GFGLDL +C TG DL +VSPKSG AV RS G P+A Sbjct: 121 LHNPADAGELFVRFELAVLNDLGFGLDLGECAATGARSDLAYVSPKSGRAVSRSAGAPWA 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML+LP FL + D DSL +AF+LT +FL+++ + + R+ F+ L+ Sbjct: 181 DKMLLLPPFLGVEGNHAADFDSLAAAFRLTGFFLHRHVYEPRGMEAAAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|190891077|ref|YP_001977619.1| DNA repair protein (recombination protein O) [Rhizobium etli CIAT 652] gi|238692513|sp|B3PUP2|RECO_RHIE6 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|190696356|gb|ACE90441.1| DNA repair protein (recombination protein O) [Rhizobium etli CIAT 652] Length = 256 Score = 185 bits (468), Expect = 6e-45, Method: Composition-based stats. Identities = 112/241 (46%), Positives = 161/241 (66%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILG++ +GE ++I EVMTR GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 1 MQWQDHAIILGIKRHGETSVIAEVMTRDRGRHLGLVRSGRSRAMQPVLQPGNAVEVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 61 RLDEHLGEFRVEPVTLRAARLMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++FV+ EL +L ++GFGLDL +C TG DL +VSPKSG AV RS G P+A Sbjct: 121 LHNPADAGELFVRFELAVLNDLGFGLDLGECAATGARSDLAYVSPKSGRAVSRSAGAPWA 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML+LP FL + D DSL +AF+LT +FL+++ + + R+ F+ L+ Sbjct: 181 DKMLLLPPFLGVEGNHAADFDSLAAAFRLTGFFLHRHVYEPRGMEAAAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|325292418|ref|YP_004278282.1| DNA repair protein RecO [Agrobacterium sp. H13-3] gi|325060271|gb|ADY63962.1| DNA repair protein RecO [Agrobacterium sp. H13-3] Length = 254 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 115/241 (47%), Positives = 167/241 (69%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD+AIILGV+ +GE ++I EVMTR GRHLG VR G+S MQP+LQAGN V V WR+ Sbjct: 1 MQWQDEAIILGVKRHGETSVIAEVMTRLRGRHLGMVRGGRSRSMQPVLQAGNRVDVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +LGEFR E L+ A+L+ ++ +YG+Q++ L R LPER+P LY L++ L+ Sbjct: 61 RLDDHLGEFRIEPLQLRAAQLMETATAVYGVQAMGALLRLLPERDPHPHLYQALDVILDN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++FV+ EL +L ++GFGLDLT+C TG+ DL++VSPK+G AVC + G PYA Sbjct: 121 LHDPVDAGELFVRFELAVLNDLGFGLDLTECAATGLRTDLIYVSPKTGRAVCSTAGAPYA 180 Query: 181 EKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 E+ML LP+FL + + + D DSL +AF+LT +FL+++ ++ + R+ F+ L+ Sbjct: 181 ERMLSLPAFLGEGQSKAADRDSLAAAFRLTGHFLHRHVYDPRGLNENAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|209548606|ref|YP_002280523.1| DNA repair protein RecO [Rhizobium leguminosarum bv. trifolii WSM2304] gi|238058646|sp|B5ZW78|RECO_RHILW RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|209534362|gb|ACI54297.1| DNA repair protein RecO [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 256 Score = 184 bits (467), Expect = 8e-45, Method: Composition-based stats. Identities = 115/241 (47%), Positives = 162/241 (67%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILGV+ +GE ++I EVMTR GRHLG VR+G+S MQP+LQAGN V V WR+ Sbjct: 1 MQWQDHAIILGVKRHGETSVIAEVMTRDRGRHLGLVRSGRSRAMQPVLQAGNAVEVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 61 RLDEHLGEFRVEPVTLRAARLMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++FV+ EL +L ++GFGLDL +C TG DL +VSPKSG AV RS G P+A Sbjct: 121 LHNPADAGELFVRFELAVLNDLGFGLDLAECAATGARSDLAYVSPKSGRAVSRSAGAPWA 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML+LP FL + D DSL +AF+LT +FL+++ + I R+ F+ L+ Sbjct: 181 DKMLLLPPFLGIEGNHAADFDSLSAAFRLTGFFLHRHVYEPRGIEAAAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|114770109|ref|ZP_01447647.1| DNA repair protein RecO [alpha proteobacterium HTCC2255] gi|114548946|gb|EAU51829.1| DNA repair protein RecO [alpha proteobacterium HTCC2255] Length = 243 Score = 184 bits (467), Expect = 8e-45, Method: Composition-based stats. Identities = 82/239 (34%), Positives = 127/239 (53%), Gaps = 1/239 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W + +I+ VR YGE ++I++ +T ++GRHLG VR G S +M +Q G+ V++ WR+ Sbjct: 1 MEWTSEGVIVSVRKYGENSVIIDTLTPKHGRHLGVVRGGASRKMAATIQPGSQVKLEWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG FR E LES + PER P ELY+ ++ Sbjct: 61 RLEEHLGNFRVEQLESRSDMFDDRLRLAALSSICSIVTFSFPERMPVAELYNSTLNLMDT 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ EL +L+ +GFGLDLT C VT VTQDL++VSPKSG AV R + Sbjct: 121 LNTGGDWKPLYALWELQVLEEMGFGLDLTSCAVTNVTQDLIYVSPKSGRAVSRKAAGEWK 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNI-IHCHLLRENFLGKLLE 238 E++L LPSFL + +T + + + ++ + T +FL+ + R + +L Sbjct: 181 ERLLPLPSFLRNKFETANHEDILNSLKTTGHFLSSWLATSLGERKLPEARNRLISRLEN 239 >gi|298291623|ref|YP_003693562.1| DNA repair protein RecO [Starkeya novella DSM 506] gi|296928134|gb|ADH88943.1| DNA repair protein RecO [Starkeya novella DSM 506] Length = 243 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 95/229 (41%), Positives = 129/229 (56%), Gaps = 1/229 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ IILG+R +GE N I+E+MT +GRHLG VR G S R LQ GN V+ WR+ Sbjct: 1 MEWSDEGIILGLRRHGEGNAIVELMTAAHGRHLGLVRGGGSRRQAAALQPGNGVQATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F EV +L+ ++ + L I L R LPER+P EL+D+L + Sbjct: 61 RLDEHLGTFALEVTTPRAGRLMGAAHSAFALSHIGSLIRMLPERDPHPELHDVLTAMVEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + G + + ELM+L +GFGLDL C TG DLL+VSPKSG AV R G P+ Sbjct: 121 LDEPRLTGMMMARFELMMLSELGFGLDLESCAATGGRNDLLYVSPKSGRAVSRDAGEPWR 180 Query: 181 EKMLVLPSFLWKE-EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL 228 ++L LP FL E + + +AF LT +FL + + I Sbjct: 181 AQLLNLPYFLIGEVAEPPSPGDVDAAFDLTGHFLARRVFEPRGIPMPES 229 >gi|295690015|ref|YP_003593708.1| DNA repair protein RecO [Caulobacter segnis ATCC 21756] gi|295431918|gb|ADG11090.1| DNA repair protein RecO [Caulobacter segnis ATCC 21756] Length = 243 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 72/240 (30%), Positives = 118/240 (49%), Gaps = 1/240 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+A +L RS+GE I+E++T+ G+ V S RM+P LQ G V +R+ Sbjct: 1 MEWEDEAYVLSARSHGETGAIVELLTQDRGKFAAHVAGAASRRMKPFLQPGARVIARYRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREP-CLELYDMLNIFLN 119 R++ LG E + + L L L GL + + + L + Sbjct: 61 RMSDQLGSASLEPMGEGPSSLFDDRLALAGLSAAAAVAAAALPEREAHPGAFHALEALIR 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 ++ + ++V+ E LL+ +GFGLDL++C TGV DL++VSP++G AV R G PY Sbjct: 121 VLEVSEIWPAVYVRYEAGLLQELGFGLDLSRCAATGVFDDLVYVSPRTGRAVSREAGRPY 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +K+L LP F+ + + +K+ +T +FL ++ R L +L E Sbjct: 181 HDKLLPLPPFMLSSQGGLAEGDVKAGLDITGHFLEQFVFGPLNRPLPPARMWLLDRLTEA 240 >gi|163733859|ref|ZP_02141301.1| DNA repair protein RecO [Roseobacter litoralis Och 149] gi|161392970|gb|EDQ17297.1| DNA repair protein RecO [Roseobacter litoralis Och 149] Length = 241 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 82/242 (33%), Positives = 122/242 (50%), Gaps = 3/242 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+++ I+L R +GE I+EV T +GRH G VR G S ++ PILQ G + + WR+ Sbjct: 1 MEWREEGILLSTRRHGESAAIIEVFTPSHGRHAGVVRGGTSRKIAPILQPGAQLDLTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLN 119 RL ++G F E + S A + L L GL ++ L LPERE LY L+ Sbjct: 61 RLEDHIGSFHVEPVRSRAAAAMGDRLALAGLNAVTALLGFCLPEREAHRALYLETERLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + +++ E+ LL +G+ L+L +C VTG DL++VSPKSG AV + Sbjct: 121 LLEEGELWPLAYLRWEVQLLHEMGYALELDQCAVTGQRDDLIYVSPKSGRAVSAQGAGDW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH-NIIHCHLLRENFLGKLLE 238 AE++L LP L DA + AF T YFL ++ + R F+ Sbjct: 181 AERLLPLPPILRGVGGGPDA-EIAQAFVTTGYFLTEHLARDLGGKPLPEARARFVETFSR 239 Query: 239 LI 240 + Sbjct: 240 RL 241 >gi|99082396|ref|YP_614550.1| DNA repair protein RecO [Ruegeria sp. TM1040] gi|119361485|sp|Q1GDH8|RECO_SILST RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|99038676|gb|ABF65288.1| DNA repair protein RecO [Ruegeria sp. TM1040] Length = 241 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 87/242 (35%), Positives = 128/242 (52%), Gaps = 3/242 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L VR +GE + ++EV T +G H G VR G S +M P LQ G + + W + Sbjct: 1 MDWRDQGILLTVRRHGESSALIEVFTEDHGLHAGLVRGGASRKMAPHLQPGAQLDLTWSA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +LG ++ E L S LS L L GL ++ L F LP+R P LY + L+ Sbjct: 61 RLEDHLGTYKAEPLRSRAGMALSGRLALAGLNAVCALLAFALPDRAPYPALYHRSSALLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ EL LL+++G+GLDL+ C TGVTQDL +VSPK+G AV + + Sbjct: 121 LLDSEDLWPLAYLRWELSLLEDLGYGLDLSACAATGVTQDLRYVSPKTGRAVSGAAAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLN-KYALQHNIIHCHLLRENFLGKLLE 238 A+++L LP + E D + +A + T +FL K A R FL L Sbjct: 181 ADRLLPLPPVMRGEGAAEDI-EILTALRTTGFFLESKLAPALGNRPIPEARGRFLDALAR 239 Query: 239 LI 240 + Sbjct: 240 RV 241 >gi|315499944|ref|YP_004088747.1| DNA repair protein reco [Asticcacaulis excentricus CB 48] gi|315417956|gb|ADU14596.1| DNA repair protein RecO [Asticcacaulis excentricus CB 48] Length = 239 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 77/239 (32%), Positives = 123/239 (51%), Gaps = 1/239 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M ++DDA +L R +GE ++ +T ++G V G S R++P LQ + VR+++R+ Sbjct: 1 MTFEDDAFVLSARPHGETGAVVHFLTLEHGHIAAHVPGGASRRLKPYLQPASRVRLSYRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 R A LG E A++ + L G+Q + R LPERE + +N Sbjct: 61 RTADQLGSATLEPEGDATAEIFDDPMALIGVQCACVMTRAVLPEREAYPGAFYAFETLIN 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 +P V ++V+ E+ LL+ +GFGLDL+ C V+G DL +VSP+S AV R G PY Sbjct: 121 AFGLPGVWPYVYVRFEMGLLEAVGFGLDLSACAVSGSRDDLAYVSPRSARAVSRREGEPY 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +K+L LP FL + + AD L+ LT +FL ++ +R + + + Sbjct: 181 KDKLLPLPGFLLSSQGGVQADDLRRGLDLTGFFLERHIFHPLNQPLPEIRTRLIDSVRD 239 >gi|144899859|emb|CAM76723.1| DNA repair protein RecO [Magnetospirillum gryphiswaldense MSR-1] Length = 250 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 87/237 (36%), Positives = 120/237 (50%), Gaps = 1/237 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+L VR GE I+ + TR +GRH G V G + LQ GNLV+ +WR+ Sbjct: 1 MDWTDDGIVLAVRRLGEAGIVASLFTRSHGRHPGMVPGGAGRANRAALQPGNLVQASWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL + LG +R E+ E+H AK L + L L S L L L Sbjct: 61 RLPEQLGTYRLELAEAHSAKALDDAGCLAALTSACALCEALLPERQPHAPLFDALSALLV 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++V EL LL+ +G+GLDL+ C TG T DL++VSPKS AV G P+A Sbjct: 121 SLTAPSWPSVYVHWELALLRGLGYGLDLSACAATGATTDLIYVSPKSARAVSAQAGQPHA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 K+L LP+FL + + DA + + LT YF+ ++ LQ I R + +L Sbjct: 181 HKLLPLPAFLLGKSEG-DATDIAAGLTLTGYFIERHLLQQRHIAMPPARLRLVDRLR 236 >gi|23014388|ref|ZP_00054207.1| COG1381: Recombinational DNA repair protein (RecF pathway) [Magnetospirillum magnetotacticum MS-1] Length = 309 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 87/236 (36%), Positives = 123/236 (52%), Gaps = 1/236 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+L VR +GE + ++TR +GRH G V GQ +PILQ GNLVR W Sbjct: 74 MEWDDDGIVLAVRRHGETGAVASLLTRSHGRHAGLVHGGQGRTNRPILQPGNLVRAKWTG 133 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL + LG F+ E+L ++ A L + L L S L + L Sbjct: 134 RLPEQLGNFKLEMLHAYGAAFLDDAARLSALGSACALVETALAERQPHPACHAALVALLH 193 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 I+V EL LL+++GFGLDL+ C TG T DL WVSPK+G AV R+ G PY Sbjct: 194 ALEAESWPSIYVHFELALLRDLGFGLDLSACAATGQTDDLAWVSPKTGRAVSRAAGEPYR 253 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +K+ LP+FL + + DA +++ ++T +FL ++ L R +G+L Sbjct: 254 DKLFKLPAFLVEGGEG-DAAAIREGLEMTGFFLQRHVLDSRHAVLPAARGRMIGRL 308 >gi|116251281|ref|YP_767119.1| DNA repair protein RecO [Rhizobium leguminosarum bv. viciae 3841] gi|119361476|sp|Q1MJ50|RECO_RHIL3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|115255929|emb|CAK07010.1| putative DNA repair protein (recombination protein O) [Rhizobium leguminosarum bv. viciae 3841] Length = 256 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 114/241 (47%), Positives = 163/241 (67%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILGV+ +GE ++I EVMTR GRHLG VR+G+S MQP+LQAGN V V WR+ Sbjct: 1 MQWQDHAIILGVKRHGETSVIAEVMTRDRGRHLGLVRSGRSRAMQPVLQAGNAVEVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 61 RLDEHLGEFRVEPVTLRAARLMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++FV+ EL +L ++GFGLDL +C TG DL++VSPKSG AV R+ G P+A Sbjct: 121 LHNPADAGELFVRFELAVLNDLGFGLDLAECAATGARSDLVYVSPKSGRAVSRAAGAPWA 180 Query: 181 EKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +KML+LP FL + D DSL +AF+LT +FL+++ + I R+ F+ L+ Sbjct: 181 DKMLLLPPFLSIEGNHAADFDSLSAAFRLTGFFLHRHVYEPRGIEAVAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|163740179|ref|ZP_02147573.1| DNA repair protein RecO [Phaeobacter gallaeciensis 2.10] gi|161386037|gb|EDQ10412.1| DNA repair protein RecO [Phaeobacter gallaeciensis 2.10] Length = 241 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 83/241 (34%), Positives = 124/241 (51%), Gaps = 5/241 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ I+L +R +GE I++ T ++GRH G VR G RM P+LQ G + + WR+ Sbjct: 1 MEWRDEGILLTMRRHGESAAIVDAFTAEHGRHAGIVRGGAGRRMAPVLQPGAQLDLTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL +LG ++ E++ S A +SS L L GL ++ L LPERE ELY L+ Sbjct: 61 RLEDHLGSYQAELIRSRAATAMSSRLALAGLNAVTALLAFCLPEREAHPELYLRSTQILD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ E+ LL+ +GFGL+ +C VTG DL++VSPKSG AV R + Sbjct: 121 LLGRDDIWPLAYLRWEVALLEEMGFGLEFEQCAVTGSRLDLIYVSPKSGRAVSRRGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLGKLL 237 A++ML LP L + + +A T +FL L R + L Sbjct: 181 ADRMLPLPPVLMGRGGAEN-SEIVTALSTTGFFLQNR-LAPSLGNHPLPEARGRLIDVLS 238 Query: 238 E 238 Sbjct: 239 R 239 >gi|304392068|ref|ZP_07374010.1| DNA repair protein RecO [Ahrensia sp. R2A130] gi|303296297|gb|EFL90655.1| DNA repair protein RecO [Ahrensia sp. R2A130] Length = 241 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 94/240 (39%), Positives = 141/240 (58%), Gaps = 4/240 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D AI+LGVR +GE +++ E+MTRQ GRHLG V G+S M+PILQ GN V WR+ Sbjct: 1 MEWTDQAIVLGVRKHGETSVVAELMTRQRGRHLGLVHGGRSRTMRPILQPGNRVTATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG+FR E A+L+ + +Y LQ++ R L ER+ +LYD L++ L+ Sbjct: 61 RLDEHLGQFRIEADNLRAARLMETDYAIYALQTLASHLRLLAERDAHPQLYDTLDLVLDA 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++ ++ EL LL +GFGLDL C TG +L+ VSP++G AV + PY Sbjct: 121 LDNPAAAGELVIRFELALLDELGFGLDLNACAATGARANLVSVSPRTGRAVSGAAAAPYG 180 Query: 181 EKMLVLPSFL----WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +++L LPSFL D ++L F LT +FL++ I+ R++ + + Sbjct: 181 DRLLALPSFLTTAQADRTSGADEETLAQGFALTGHFLHRNVFGARGINPPAERDSLIRAV 240 >gi|163738241|ref|ZP_02145657.1| DNA repair protein RecO [Phaeobacter gallaeciensis BS107] gi|161388857|gb|EDQ13210.1| DNA repair protein RecO [Phaeobacter gallaeciensis BS107] Length = 241 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 82/237 (34%), Positives = 123/237 (51%), Gaps = 5/237 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ I+L +R +GE I++ T ++GRH G VR G RM P+LQ G + + WR+ Sbjct: 1 MEWRDEGILLTMRRHGESAAIVDAFTAEHGRHAGIVRGGAGRRMAPVLQPGAQLDLTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL +LG ++ E++ S A +SS L L GL ++ L LPERE ELY L+ Sbjct: 61 RLEDHLGSYQAELIRSRAATAMSSRLALAGLNAVTALLAFCLPEREAHPELYLRSTQILD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ E+ LL+ +GFGL+ +C VTG DL++VSPKSG AV R + Sbjct: 121 LLGRDDIWPLAYLRWEVALLEEMGFGLEFEQCAVTGSRLDLIYVSPKSGRAVSRRGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLG 234 A++ML LP L + + +A T +FL L R + Sbjct: 181 ADRMLPLPPVLMGRGGAEN-SEIVTALSTTGFFLQNR-LAPSLGNHPLPEARGRLID 235 >gi|307320728|ref|ZP_07600140.1| DNA repair protein RecO [Sinorhizobium meliloti AK83] gi|306893655|gb|EFN24429.1| DNA repair protein RecO [Sinorhizobium meliloti AK83] Length = 259 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 110/240 (45%), Positives = 165/240 (68%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+AIILG+R +GE ++I EVMT +GRHLG VR+G+S MQP+LQ GN V V+WR+ Sbjct: 13 MQWSDEAIILGIRRHGESSVIAEVMTPGHGRHLGLVRSGRSRTMQPVLQPGNSVEVSWRA 72 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E L+ A+L+ ++ +YG+Q++ L R LPER+P LY+ L + ++ Sbjct: 73 RLDEHLGEFRVEPLQLRAARLIETATSVYGIQALGALLRLLPERDPHPHLYEALAVIVDH 132 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P+ G++FV+ EL +L ++GFGLDL++C TG +L++VSPKSG A+CR G PYA Sbjct: 133 LQDPADAGELFVRFELAVLNDLGFGLDLSRCGATGARSELVYVSPKSGRAICREAGAPYA 192 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 ++ML LP FL + D +SL +AF+LT YFLN++ + + R+ F+ L+ + Sbjct: 193 DRMLALPDFLSGGSRAADHESLAAAFRLTAYFLNRHVYEPRGVDAASARDGFVHATLKAL 252 >gi|227821417|ref|YP_002825387.1| DNA repair protein RecO [Sinorhizobium fredii NGR234] gi|227340416|gb|ACP24634.1| DNA repair protein RecO [Sinorhizobium fredii NGR234] Length = 276 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 112/240 (46%), Positives = 162/240 (67%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D AIILG+R +GE ++I EVMT +GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 29 MQWSDQAIILGIRRHGESSVIAEVMTSAHGRHLGLVRSGRSRTMQPVLQPGNSVEVTWRA 88 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E LE A+L+ ++ +YG+Q++ L R LPER+P LY+ L + ++ Sbjct: 89 RLDEHLGEFRLEPLELRAARLMEAATSVYGIQALGALLRLLPERDPHPHLYEALAVIVDH 148 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P+ G++FV+ EL +L ++GFGLDL++C TG +L++VSPK+G AV R+ G PYA Sbjct: 149 LQDPADAGELFVRFELAVLNDLGFGLDLSECAATGHRAELIYVSPKTGRAVSRAAGAPYA 208 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 E+ML LP FL D DSL +AF+LT YFLN++ + + R+ F+ L+ + Sbjct: 209 ERMLALPDFLSGTRSAADHDSLAAAFRLTAYFLNRHVYEPRGVDVSSARDGFVHATLKAL 268 >gi|195970186|ref|NP_385194.3| DNA repair protein RecO [Sinorhizobium meliloti 1021] gi|307300911|ref|ZP_07580680.1| DNA repair protein RecO [Sinorhizobium meliloti BL225C] gi|15074020|emb|CAC45667.1| Recombinational DNA repair protein (RecF pathway) [Sinorhizobium meliloti 1021] gi|306903866|gb|EFN34452.1| DNA repair protein RecO [Sinorhizobium meliloti BL225C] Length = 259 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 110/240 (45%), Positives = 164/240 (68%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+AIILG+R +GE ++I EVMT +GRHLG VR+G+S MQP+LQ GN V V+WR+ Sbjct: 13 MQWSDEAIILGIRRHGESSVIAEVMTPGHGRHLGLVRSGRSRTMQPVLQPGNSVEVSWRA 72 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E L+ A L+ ++ +YG+Q++ L R LPER+P LY+ L + ++ Sbjct: 73 RLDEHLGEFRVEPLQLRAASLIETATSVYGIQALGALLRLLPERDPHPHLYEALAVIVDH 132 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P+ G++FV+ EL +L ++GFGLDL++C TG +L++VSPKSG A+CR G PYA Sbjct: 133 LQDPADAGELFVRFELAVLNDLGFGLDLSRCGATGARSELVYVSPKSGRAICREAGAPYA 192 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 ++ML LP FL + D +SL +AF+LT YFLN++ + + R+ F+ L+ + Sbjct: 193 DRMLALPDFLSGGSRAADHESLAAAFRLTAYFLNRHVYEPRGVDAASARDGFVHATLKAL 252 >gi|20139557|sp|Q92KH5|RECO_RHIME RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 247 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 110/240 (45%), Positives = 164/240 (68%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+AIILG+R +GE ++I EVMT +GRHLG VR+G+S MQP+LQ GN V V+WR+ Sbjct: 1 MQWSDEAIILGIRRHGESSVIAEVMTPGHGRHLGLVRSGRSRTMQPVLQPGNSVEVSWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E L+ A L+ ++ +YG+Q++ L R LPER+P LY+ L + ++ Sbjct: 61 RLDEHLGEFRVEPLQLRAASLIETATSVYGIQALGALLRLLPERDPHPHLYEALAVIVDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P+ G++FV+ EL +L ++GFGLDL++C TG +L++VSPKSG A+CR G PYA Sbjct: 121 LQDPADAGELFVRFELAVLNDLGFGLDLSRCGATGARSELVYVSPKSGRAICREAGAPYA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 ++ML LP FL + D +SL +AF+LT YFLN++ + + R+ F+ L+ + Sbjct: 181 DRMLALPDFLSGGSRAADHESLAAAFRLTAYFLNRHVYEPRGVDAASARDGFVHATLKAL 240 >gi|188580258|ref|YP_001923703.1| DNA repair protein RecO [Methylobacterium populi BJ001] gi|238692877|sp|B1ZA19|RECO_METPB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|179343756|gb|ACB79168.1| DNA repair protein RecO [Methylobacterium populi BJ001] Length = 246 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 94/239 (39%), Positives = 139/239 (58%), Gaps = 6/239 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ +++G+R +GE ++LE+MT ++GRHLG V G+S RMQP+LQ GN +R WR+ Sbjct: 1 MQWIDEGLVIGLRKHGETGVVLELMTLEHGRHLGLVHGGRSRRMQPMLQPGNTLRATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL LG + E L + ++L+ S L LYG+ + L R LPER+P LY+ + + Sbjct: 61 RLDGALGSYAVEPLTLNASRLMDSGLALYGIGHLSTLLRLLPERDPHPALYEAAQVLIAH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + + V+ EL LL +GFGLDL+ C TG L++VSPKSG AV S G P+ Sbjct: 121 LDEPEIAPALMVRFELALLAGLGFGLDLSHCAATGANDALVYVSPKSGRAVSASAGEPFR 180 Query: 181 EKMLVLPSFLWKEEQT------IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +++L LP FL +Q DA ++ F LT YFL+++ + R F+ Sbjct: 181 DRLLALPPFLRDRDQPGSGWRTPDAHDVREGFTLTGYFLDQHVWRPRAQDTPEERARFV 239 >gi|126461085|ref|YP_001042199.1| DNA repair protein RecO [Rhodobacter sphaeroides ATCC 17029] gi|166221908|sp|A3PGG1|RECO_RHOS1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|126102749|gb|ABN75427.1| DNA repair protein RecO [Rhodobacter sphaeroides ATCC 17029] Length = 239 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 81/241 (33%), Positives = 120/241 (49%), Gaps = 5/241 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +L VR +GE + I+EV T +GRH G VR G S ++ PILQ G + + W++ Sbjct: 2 MEWRDEGALLSVRRHGESSAIIEVFTAAHGRHAGVVRGGASRKIAPILQPGAQLDLTWKA 61 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E L S A L L LPEREP L+ L+ Sbjct: 62 RLDEHMGAFTVEPLRSRTALLGDRLGLAGLNAICAMLHVTLPEREPHSTLWQESMALLDA 121 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P +++ E+ LL+ GFGLDLT+C VTG +DL +VSPK+G AV R +A Sbjct: 122 LDRP-GWPPAYLRWEMRLLEETGFGLDLTRCAVTGSREDLAFVSPKTGRAVSRGAAGGWA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLGKLLE 238 +++ LP L + A+ ++ +T +FL + L N R + L Sbjct: 181 DRLFPLPLALLGQG-PASAEEVRQGLAITGHFLGRE-LAPLLNGRPLPEARARLMELLAR 238 Query: 239 L 239 Sbjct: 239 A 239 >gi|16125811|ref|NP_420375.1| DNA repair protein RecO [Caulobacter crescentus CB15] gi|20139676|sp|Q9A802|RECO_CAUCR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|13422953|gb|AAK23543.1| conserved hypothetical protein [Caulobacter crescentus CB15] Length = 250 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 73/239 (30%), Positives = 116/239 (48%), Gaps = 1/239 (0%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 W+D+A +L RS+GE I+E++T G+ V S RM+P LQ G V V +R++ Sbjct: 9 EWEDEAYVLSARSHGETGAIVELLTEARGKVAAHVAGAASRRMKPFLQPGARVIVRYRAK 68 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREP-CLELYDMLNIFLNC 120 + LG E + + L L L GL + + + L + Sbjct: 69 VEGQLGSATLEPMGEGPSSLFDDRLALAGLSAAAAVAAAALPEREAHPGAFHALEALIRV 128 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 +IP + ++V+ E LL+ +GFGLDL+KC TG DL++VSP++G AV R G PY Sbjct: 129 LEIPEIWPAVYVRYEAGLLQELGFGLDLSKCAATGAFDDLVYVSPRTGRAVSREAGKPYH 188 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +K+L LP F+ + + +K+ +T +FL ++ R L +L E Sbjct: 189 DKLLPLPPFMLSSQGGLAEGDVKAGLDITGHFLEQFVFGPLNRPLPPARLWLLDRLAEA 247 >gi|259418038|ref|ZP_05741957.1| DNA repair protein RecO [Silicibacter sp. TrichCH4B] gi|259346944|gb|EEW58758.1| DNA repair protein RecO [Silicibacter sp. TrichCH4B] Length = 241 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 87/242 (35%), Positives = 130/242 (53%), Gaps = 3/242 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L VR +GE + ++EV T+ +GRH G VR G S +M P LQ G + + W + Sbjct: 1 MDWRDQGILLTVRRHGESSALIEVFTQAHGRHAGLVRGGASRKMAPHLQPGAQLDLTWSA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +LG ++ E L S A LS L L GL ++ L F LP+RE ELY L+ Sbjct: 61 RLEDHLGTYKAEPLRSRAASALSGRLALSGLNAVCALLAFALPDREAYSELYHRSEALLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +++ EL LL+++G+GLDL+ C VTG T+ L++VSPK+G AV + + Sbjct: 121 LLDNEDLWPLGYLRWELSLLEDLGYGLDLSCCAVTGATEGLMYVSPKTGRAVSEAGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLN-KYALQHNIIHCHLLRENFLGKLLE 238 A+++L LP + E D + +A + T +F K A R FL L Sbjct: 181 ADRLLPLPPVMRGEGDGEDI-EILTALRTTGFFFESKLAPALGNRPVPEARGRFLDALSR 239 Query: 239 LI 240 + Sbjct: 240 RL 241 >gi|323137541|ref|ZP_08072618.1| DNA repair protein RecO [Methylocystis sp. ATCC 49242] gi|322397167|gb|EFX99691.1| DNA repair protein RecO [Methylocystis sp. ATCC 49242] Length = 241 Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats. Identities = 96/239 (40%), Positives = 138/239 (57%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +++G R +GE ++ILE+MTRQ+GRHLG VR G+S M+P+LQ GNLV +WR+ Sbjct: 1 MEWRDEGLVIGARKHGETSVILELMTRQHGRHLGVVRGGRSQAMRPVLQPGNLVVASWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +LG F E L S A+ L L+G+ ++ R LPER+P EL++M + Sbjct: 61 RLEVHLGAFAIEPLASRAARYLDRGAALHGVAALAAWLRLLPERDPYEELFEMADAIACR 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + EL LL +GFGLDL C +TG DL +VSPKSG AV R G P+ Sbjct: 121 LDAADFAAPLMARFELALLGALGFGLDLGACALTGARDDLAYVSPKSGRAVSREAGAPWR 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 E++L P+FL + D + +AF+LT YFL + L + R ++ L Sbjct: 181 ERLLPYPAFLREASDVAAVDDVAAAFRLTGYFLTRDVLAPRGVAMPASRALYIDALARA 239 >gi|255263314|ref|ZP_05342656.1| DNA repair protein RecO [Thalassiobium sp. R2A62] gi|255105649|gb|EET48323.1| DNA repair protein RecO [Thalassiobium sp. R2A62] Length = 242 Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats. Identities = 78/239 (32%), Positives = 118/239 (49%), Gaps = 3/239 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 W+D+ +L VR +GE I+E+ T ++GRH G VR G S ++ PILQ G + V W++R Sbjct: 3 QWRDEGALLSVRRHGESAAIVEIFTAEHGRHAGIVRGGTSRKIAPILQPGAQLDVVWKAR 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREP-CLELYDMLNIFLNC 120 L ++LG F E + S A ++S L L GL ++ L F LY + ++ Sbjct: 63 LEEHLGSFSVEPVRSRAAAVMSDRLALAGLNAVCALLAFAMPEREAHPSLYRQSTVLMDL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 +++ EL LL+ +GFGLDL C VTG + L +VSPKSG AV +A Sbjct: 123 LGNTDAWPLAYLRWELALLEELGFGLDLGSCAVTGSVEGLCYVSPKSGRAVSAEGAGEWA 182 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNI-IHCHLLRENFLGKLLE 238 +++L LP L DA + + T YFL + + R + L+ Sbjct: 183 DRLLPLPDVLLGVGSAPDA-EILQGLETTGYFLEHWLARALGDRPVPDARGRMVDALVR 240 >gi|221641177|ref|YP_002527439.1| DNA repair protein RecO [Rhodobacter sphaeroides KD131] gi|332560104|ref|ZP_08414426.1| DNA repair protein RecO [Rhodobacter sphaeroides WS8N] gi|254764657|sp|B9KSB0|RECO_RHOSK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|221161958|gb|ACM02938.1| DNA repair protein recO [Rhodobacter sphaeroides KD131] gi|332277816|gb|EGJ23131.1| DNA repair protein RecO [Rhodobacter sphaeroides WS8N] Length = 239 Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats. Identities = 81/241 (33%), Positives = 120/241 (49%), Gaps = 5/241 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +L VR +GE + I+EV T +GRH G VR G S ++ PILQ G + + W++ Sbjct: 2 MEWRDEGALLSVRRHGESSAIIEVFTAAHGRHAGVVRGGASRKIAPILQPGAQLDLTWKA 61 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E L S A L L LPEREP L+ L+ Sbjct: 62 RLDEHMGAFTVEPLRSRTALLGDRLGLAGLNAICAMLHVTLPEREPHSTLWQESMALLDA 121 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P +++ E+ LL+ GFGLDLT+C VTG +DL +VSPK+G AV R +A Sbjct: 122 LDRP-GWPPAYLRWEMRLLEETGFGLDLTRCAVTGSREDLAFVSPKTGRAVSRGAAGGWA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLGKLLE 238 +++ LP L + A+ ++ +T +FL + L N R + L Sbjct: 181 DRLFPLPLALLGQG-PASAEEVRQGLAITGHFLGRE-LAPLLNGRPMPEARARLMELLAR 238 Query: 239 L 239 Sbjct: 239 A 239 >gi|84515166|ref|ZP_01002529.1| DNA repair protein RecO [Loktanella vestfoldensis SKA53] gi|84511325|gb|EAQ07779.1| DNA repair protein RecO [Loktanella vestfoldensis SKA53] Length = 243 Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats. Identities = 81/242 (33%), Positives = 124/242 (51%), Gaps = 4/242 (1%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M W+DDA IL +R +GE + I+EV + +GRH G VR G S ++ P++Q G V V W Sbjct: 1 MISWRDDAAILAMRPFGESSAIIEVFSANHGRHAGVVRGGASRKIAPLIQPGAQVNVAWA 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFL 118 +RL +LG F E + S A ++ L L GL ++ L LPERE LY L Sbjct: 61 ARLDDHLGSFTVEPVRSRNAAAMADRLSLAGLNAVCALLLMVLPERESHPLLYQRSIALL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + +V +++ E LL+ +GFGLDL+ C +GV +DL +VSPKSG AV R Sbjct: 121 DLLDQRAVWPLAYLRWEQALLEEMGFGLDLSACAASGVNEDLAFVSPKSGRAVSRDAAGV 180 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQ-HNIIHCHLLRENFLGKLL 237 +A+++L LP L + + A T +F+ ++ + R + ++ Sbjct: 181 WADRLLPLPPVLAGKGDA-SGVEIAKALGTTGFFIENRLIKGLGDRNVPAARARLIDAIM 239 Query: 238 EL 239 Sbjct: 240 RA 241 >gi|150395917|ref|YP_001326384.1| DNA repair protein RecO [Sinorhizobium medicae WSM419] gi|166221910|sp|A6U7B9|RECO_SINMW RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|150027432|gb|ABR59549.1| DNA repair protein RecO [Sinorhizobium medicae WSM419] Length = 249 Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats. Identities = 111/240 (46%), Positives = 164/240 (68%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D AIILG+R +GE ++I EVMT +GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 1 MQWSDQAIILGIRRHGESSVIAEVMTPGHGRHLGLVRSGRSRAMQPVLQPGNSVEVVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E L+ A+L+ ++ +YG+Q++ L R LPER+P LY+ L + ++ Sbjct: 61 RLDEHLGEFRVEPLQLRAARLIETATSVYGIQALGSLLRLLPERDPHPHLYEALAVIVDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P+ G++FV+ EL +L ++GFGLDL++C TG +L++VSPKSG A+CR G PYA Sbjct: 121 LQDPADAGELFVRFELAVLNDLGFGLDLSRCGATGARSELVYVSPKSGRAICREAGAPYA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 E+ML LP FL + + D +SL +AF+LT YFLN++ + + R+ F+ L+ + Sbjct: 181 ERMLALPDFLSGQNRAADHESLAAAFRLTAYFLNRHVYEPRGVDAASARDGFVHATLKAL 240 >gi|319408285|emb|CBI81938.1| DNA repair protein RecO [Bartonella schoenbuchensis R1] Length = 248 Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats. Identities = 99/239 (41%), Positives = 149/239 (62%), Gaps = 1/239 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ AIILG R +GE ++ILE+MTRQ+GR++G V+ G+S M +LQ GN V W + Sbjct: 1 MRWKEQAIILGTRQHGETSVILEIMTRQHGRYMGMVKGGRSRSMAALLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F+ E L+ H ++L+ LY LQ + R LPER+P LYDML+IF+ Sbjct: 61 RLDEHLGLFKLEALDLHASRLMLIPEALYTLQLMASHLRLLPERDPHPILYDMLHIFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 VI ++ ++ E+ LLK +GFGLDL+ CVVTG ++L +VSPKSG AV G + Sbjct: 121 FDEWFVIAELLIRFEMRLLKELGFGLDLSCCVVTGCRENLHYVSPKSGRAVSEEAGYLWR 180 Query: 181 EKMLVLPSFLWKE-EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +K+L LP FL + + ID + +++ F LT++FL ++ + I +R N + Sbjct: 181 DKLLPLPQFLIQRASRPIDFNDMRNGFALTNFFLTRHVWEPRRIQQPSVRVNLINLFER 239 >gi|119370511|sp|Q3J5V8|RECO_RHOS4 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 238 Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats. Identities = 80/241 (33%), Positives = 120/241 (49%), Gaps = 5/241 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +L VR +GE + I+EV T +GRH G VR G S ++ PILQ G + + W++ Sbjct: 1 MEWRDEGALLSVRRHGESSAIIEVFTAAHGRHAGVVRGGASRKIAPILQPGAQLDLTWKA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E L S A L L LPEREP L+ + L+ Sbjct: 61 RLDEHMGAFTVEPLRSRTALLGDRLGLAGLNAICAMLHVTLPEREPHSTLWQESMVLLDA 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P +++ E+ LL+ GFGLDLT+C VTG +DL +VSPK+G AV +A Sbjct: 121 LDRP-GWPPAYLRWEMRLLEETGFGLDLTRCAVTGSREDLAFVSPKTGRAVSSGAAGGWA 179 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLGKLLE 238 +++ LP L + A+ ++ +T +FL + L N R + L Sbjct: 180 DRLFPLPLALLGQG-PASAEEVRQGLAITGHFLGRE-LAPLLNGRPLPEARARLMELLAR 237 Query: 239 L 239 Sbjct: 238 A 238 >gi|77462223|ref|YP_351727.1| DNA repair protein RecO [Rhodobacter sphaeroides 2.4.1] gi|77386641|gb|ABA77826.1| putative RecO protein [Rhodobacter sphaeroides 2.4.1] Length = 239 Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats. Identities = 80/241 (33%), Positives = 120/241 (49%), Gaps = 5/241 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +L VR +GE + I+EV T +GRH G VR G S ++ PILQ G + + W++ Sbjct: 2 MEWRDEGALLSVRRHGESSAIIEVFTAAHGRHAGVVRGGASRKIAPILQPGAQLDLTWKA 61 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G F E L S A L L LPEREP L+ + L+ Sbjct: 62 RLDEHMGAFTVEPLRSRTALLGDRLGLAGLNAICAMLHVTLPEREPHSTLWQESMVLLDA 121 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P +++ E+ LL+ GFGLDLT+C VTG +DL +VSPK+G AV +A Sbjct: 122 LDRP-GWPPAYLRWEMRLLEETGFGLDLTRCAVTGSREDLAFVSPKTGRAVSSGAAGGWA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLGKLLE 238 +++ LP L + A+ ++ +T +FL + L N R + L Sbjct: 181 DRLFPLPLALLGQG-PASAEEVRQGLAITGHFLGRE-LAPLLNGRPLPEARARLMELLAR 238 Query: 239 L 239 Sbjct: 239 A 239 >gi|84684348|ref|ZP_01012249.1| DNA repair protein RecO [Maritimibacter alkaliphilus HTCC2654] gi|84667327|gb|EAQ13796.1| DNA repair protein RecO [Rhodobacterales bacterium HTCC2654] Length = 246 Score = 181 bits (458), Expect = 8e-44, Method: Composition-based stats. Identities = 86/241 (35%), Positives = 125/241 (51%), Gaps = 5/241 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D +L VR +GE ++I+EV T ++GRH G VR G S ++ PILQ G+ + + WR+ Sbjct: 4 MEWRDQGTLLSVRKHGETSVIIEVFTAEHGRHAGVVRGGVSRKIAPILQPGSQLDLVWRA 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL +++G F E ++S A ++ L GL +I L F LPERE LY L+ Sbjct: 64 RLEEHIGAFTVEPVKSRAAAIMGDRNALAGLNAITALLSFALPEREAHPRLYTRSIAMLD 123 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 ++Q EL LL+ +G+GLDLT C VTG +DL +VSPKSG AV + Sbjct: 124 LLAETPAWPVGYLQWELALLEELGYGLDLTACAVTGGAEDLAYVSPKSGRAVSAEGAGEW 183 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLGKLL 237 +++L LP T D + + T YFL + L H R + +L Sbjct: 184 VDRLLPLPEE-LLGVVTQDLAGIPDGLRTTGYFLT-HGLAHALGDRPLPEARARLVDRLS 241 Query: 238 E 238 Sbjct: 242 R 242 >gi|163850484|ref|YP_001638527.1| DNA repair protein RecO [Methylobacterium extorquens PA1] gi|240137548|ref|YP_002962019.1| DNA repair protein RecO [Methylobacterium extorquens AM1] gi|238687373|sp|A9W1K0|RECO_METEP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|163662089|gb|ABY29456.1| DNA repair protein RecO [Methylobacterium extorquens PA1] gi|240007516|gb|ACS38742.1| DNA repair protein RecO [Methylobacterium extorquens AM1] Length = 246 Score = 181 bits (458), Expect = 9e-44, Method: Composition-based stats. Identities = 95/239 (39%), Positives = 138/239 (57%), Gaps = 6/239 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD +++G+R +GE ++LE+MT ++GRHLG V G+S RMQP+LQ GN +R WR+ Sbjct: 1 MQWIDDGLVIGLRKHGETGVVLELMTPEHGRHLGLVHGGRSRRMQPMLQPGNTLRATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL LG + E L + ++L+ S L LYG+ + L R LPER+P LY+ I + Sbjct: 61 RLDGALGAYAVEPLTLNASRLMDSGLALYGVAHLSALLRLLPERDPHPALYEAAQILIAH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + + V+ EL LL +GFGLDL+ C TG L++VSPKSG AV S G P+ Sbjct: 121 LDDPEIAPALMVRFELALLAGLGFGLDLSHCAATGANDALVYVSPKSGRAVSASAGEPFR 180 Query: 181 EKMLVLPSFLWKEEQT------IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +++L LP FL +Q D ++ F LT YFL+++ + R F+ Sbjct: 181 DRLLPLPPFLRDRDQPGSGWRTPDTHDVREGFTLTGYFLDQHVWRPRAQDTPEERARFV 239 >gi|218529181|ref|YP_002419997.1| DNA repair protein RecO [Methylobacterium chloromethanicum CM4] gi|254764643|sp|B7KPI6|RECO_METC4 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|218521484|gb|ACK82069.1| DNA repair protein RecO [Methylobacterium chloromethanicum CM4] Length = 246 Score = 181 bits (458), Expect = 9e-44, Method: Composition-based stats. Identities = 95/239 (39%), Positives = 138/239 (57%), Gaps = 6/239 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD +++G+R +GE ++LE+MT ++GRHLG V G+S RMQP+LQ GN +R WR+ Sbjct: 1 MQWIDDGLVIGLRKHGETGVVLELMTPEHGRHLGLVHGGRSRRMQPMLQPGNTLRATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL LG + E L + ++L+ S L LYG+ + L R LPER+P LY+ I + Sbjct: 61 RLDGALGAYAVEPLTLNASRLMDSGLALYGVAHLSALLRLLPERDPHPALYEAAQILIAH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + + V+ EL LL +GFGLDL+ C TG L++VSPKSG AV S G P+ Sbjct: 121 LDDPEIAPALMVRFELALLAGLGFGLDLSHCAATGANDALVYVSPKSGRAVSASAGEPFR 180 Query: 181 EKMLVLPSFLWKEEQT------IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +++L LP FL +Q D ++ F LT YFL+++ + R F+ Sbjct: 181 DRLLPLPPFLRDRDQPGSGWRTPDTQDVREGFTLTGYFLDQHVWRPRAQDTPEERARFV 239 >gi|83858198|ref|ZP_00951720.1| DNA repair protein RecO [Oceanicaulis alexandrii HTCC2633] gi|83853021|gb|EAP90873.1| DNA repair protein RecO [Oceanicaulis alexandrii HTCC2633] Length = 242 Score = 181 bits (458), Expect = 9e-44, Method: Composition-based stats. Identities = 83/238 (34%), Positives = 127/238 (53%), Gaps = 2/238 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W I+ VR +GE + ++EV+T ++GRH G VR G+S M+PILQ GN +R WR+ Sbjct: 1 MEWTASGRIVAVRPHGETSAVIEVLTAEHGRHAGLVRGGRSKAMRPILQPGNRIRAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL +LG F E + L+ L L GL + + LPERE + D + ++ Sbjct: 61 RLESHLGGFAVEAEDLSAGVLMEDPLALSGLNAACAMASICLPEREEHPAVADAFEVLIS 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + P + ++V+ E LL ++G+GLDL +C TGV L++VSPKSG AV G PY Sbjct: 121 ALEDPDLWPALYVRWEAGLLADLGYGLDLRRCAATGVETGLVYVSPKSGRAVSAEAGEPY 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 ++ML LP F+ K + + + +LT +F+ + L R + +L Sbjct: 181 RDRMLALPGFM-KGGGQVSEGDVGAGLKLTAHFIERRVLWPADRMLPDARTRMIERLE 237 >gi|89070889|ref|ZP_01158124.1| DNA repair protein RecO, putative [Oceanicola granulosus HTCC2516] gi|89043528|gb|EAR49739.1| DNA repair protein RecO, putative [Oceanicola granulosus HTCC2516] Length = 239 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 85/241 (35%), Positives = 121/241 (50%), Gaps = 5/241 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D ++L R +GE +I EV T GRH G VR G+S ++ P+LQ G V V W + Sbjct: 1 MQWRDGGVLLARRGHGESGVIAEVFTETRGRHAGLVRGGRSKQLAPVLQPGEQVEVTWTA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++LG +R E L S A +++ L L GL +I L F LPEREP LY L+ Sbjct: 61 RLEEHLGAYRVEPLRSRAALVMNDRLALAGLNAICGLLAFALPEREPHPALYARSVTLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 ++ EL LL+ +GFGLDL+ C VTG L +VSP++G AV + + Sbjct: 121 LLGRTDAWPLAYLHWELALLEELGFGLDLSSCAVTGAEDGLAFVSPRTGRAVSAAGAGEW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLGKLL 237 A ++L LP L + DA + + T +FL + L R + L Sbjct: 181 AGRLLPLPPALRGQGPGPDA-EILEGLRTTGHFLATW-LAPALGDRPLPEARARLVALLS 238 Query: 238 E 238 Sbjct: 239 R 239 >gi|254560020|ref|YP_003067115.1| DNA repair protein RecO [Methylobacterium extorquens DM4] gi|254267298|emb|CAX23130.1| DNA repair protein RecO [Methylobacterium extorquens DM4] Length = 246 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 96/239 (40%), Positives = 139/239 (58%), Gaps = 6/239 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD +++G+R +GE ++LE+MT ++GRHLG V G+S RMQP+LQ GN +R WR+ Sbjct: 1 MQWIDDGLVIGLRKHGETGVVLELMTPEHGRHLGLVHGGRSRRMQPMLQPGNTLRATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL LG + E L + ++L+ S L LYG+ + L R LPER+P LY+ I + Sbjct: 61 RLDGALGAYAVEPLTLNASRLMDSGLALYGVAHLSALLRLLPERDPHPALYEAAQILIAH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + + V+ EL LL +GFGLDL+ C TG L++VSPKSG AV S G P+ Sbjct: 121 LDDPEIAPALMVRFELALLAGLGFGLDLSHCAATGANDALVYVSPKSGRAVSASAGEPFR 180 Query: 181 EKMLVLPSFLWKEEQ------TIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +++L LP FL +Q T D ++ F LT YFL+++ + R F+ Sbjct: 181 DRLLPLPPFLRDRDQSGSGWRTPDTHDVREGFTLTGYFLDQHVWRPRAQDTPEERARFV 239 >gi|163793044|ref|ZP_02187020.1| GTP-binding protein Era [alpha proteobacterium BAL199] gi|159181690|gb|EDP66202.1| GTP-binding protein Era [alpha proteobacterium BAL199] Length = 253 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 80/240 (33%), Positives = 126/240 (52%), Gaps = 5/240 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 W D+ I+L +++GE + I+ ++TR +GRH G VR S R + + Q GN V WR+RL Sbjct: 4 WTDEGIVLAAKAHGEGSAIVVLLTRDHGRHAGLVRGAFSGRARGVYQPGNRVTAEWRARL 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLNCH 121 A +LG + E+ H A +L L L GL + + LPEREP +++D L L+ Sbjct: 64 ADHLGNYTCELGHGHAAAVLDDPLKLAGLSAACAIAEASLPEREPHPQVHDGLVALLDAM 123 Query: 122 KIP---SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 P ++V+ E+ +L ++G+GLDL C TG DL +VSP++G AV + G P Sbjct: 124 AEPELGDAWIAVYVRWEIGVLADLGYGLDLESCAATGANDDLAYVSPRTGRAVSLAAGEP 183 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 Y +++L LP FL D D L L+ +F+ ++ + R F+ + Sbjct: 184 YRDRLLSLPRFLIGRGGG-DQDDLFRGLALSGFFMERHVFATHGRQPPPARTRFVERFAR 242 >gi|84500557|ref|ZP_00998806.1| DNA repair protein RecO [Oceanicola batsensis HTCC2597] gi|84391510|gb|EAQ03842.1| DNA repair protein RecO [Oceanicola batsensis HTCC2597] Length = 241 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 81/239 (33%), Positives = 132/239 (55%), Gaps = 5/239 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+L VR +GE I +V T GRH G VR S ++ P+LQ G + ++W++ Sbjct: 1 MEWRDQGILLAVRRHGESAAIADVFTPGRGRHAGVVRGATSRKLAPVLQPGAQLDISWKA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL ++LG F E + S A++L L L GL ++ L F LPERE LY L+ Sbjct: 61 RLEEHLGHFTVEPVRSRAAQILGDRLALAGLNAVTALLCFALPEREAHEALYRRTETLLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + ++ EL LL+++G+GLDLT+C VTG + L ++SP++G AV + + Sbjct: 121 LLGQMDLWPLAYLHWELALLEDLGYGLDLTECAVTGAREGLDYISPRTGRAVTAAGAGDW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLGKL 236 A+++L LP L ++ + D + + S F++T +FL ++ L R+ F+ + Sbjct: 181 ADRLLPLPPCLLRQGEAPD-EEILSGFRVTGHFLAEH-LAPELGQKPIPEARQRFVDRF 237 >gi|182679932|ref|YP_001834078.1| DNA repair protein RecO [Beijerinckia indica subsp. indica ATCC 9039] gi|238691211|sp|B2IBG3|RECO_BEII9 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|182635815|gb|ACB96589.1| DNA repair protein RecO [Beijerinckia indica subsp. indica ATCC 9039] Length = 250 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 92/235 (39%), Positives = 126/235 (53%), Gaps = 2/235 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ +I+G+R YGE ILEV T +GRH G VR G R++ +LQ GN WR+ Sbjct: 1 MEWHDEGLIIGLRRYGETGAILEVFTPAHGRHFGLVRGGFGRRLRALLQPGNQADFTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL Q LG E + +L +S L L G+ I L R LPER+P ELY ++ + L Sbjct: 61 RLDQQLGLLAVEPTKLMTTRLFASGLALQGMNLIAALLRLLPERDPHPELYAVVRVLLEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+V + + EL +L GFGLDL+ C TG TQ+L++VSPKSG AV G PY Sbjct: 121 LDEPAVAPILLARFELAMLTETGFGLDLSACAATGATQELIYVSPKSGRAVSARAGAPYH 180 Query: 181 EKMLVLPSFLWKEE--QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +K+L LP F + + +++ F LT +FL + R FL Sbjct: 181 DKLLGLPPFFLDGSLLKNPTLEEVEAGFALTGHFLMRDLFGPRGQTLPDARHAFL 235 >gi|114570118|ref|YP_756798.1| DNA repair protein RecO [Maricaulis maris MCS10] gi|114340580|gb|ABI65860.1| DNA repair protein RecO [Maricaulis maris MCS10] Length = 234 Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 85/231 (36%), Positives = 126/231 (54%), Gaps = 2/231 (0%) Query: 10 LGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEF 69 L VR +GE + I+EV+T + GRH G VR +S M+PILQ GN + VNWR+RL+++LG F Sbjct: 2 LAVRPHGETSAIVEVLTAEQGRHAGLVRGARSRSMRPILQPGNQITVNWRARLSEHLGMF 61 Query: 70 RFEVLESHCAKLLSSSLFLYGLQSIV-PLFRFLPEREPCLELYDMLNIFLNCHKIPSVIG 128 + E + ++ L GL S LPERE ++ + L P + Sbjct: 62 QIEADDLTAGMVMEDRTALAGLNSACAIAVMGLPEREAHPRVHQGFQLLLGAFDNPDIWP 121 Query: 129 KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPS 188 ++V+ E LL ++G+GLD++ C VTGVT+DL +SP++G AVCR PYA K+L LP Sbjct: 122 ALYVRWEAGLLSDLGYGLDMSACAVTGVTEDLTHISPRTGRAVCREEAAPYAPKLLELPP 181 Query: 189 FLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 F+ I+A + LT YFL + L R + +L ++ Sbjct: 182 FMAGSG-KIEAGDIARGLALTGYFLERRVLWPIDKQLPEARGRLMAELEQV 231 >gi|15888381|ref|NP_354062.1| DNA repair protein RecO [Agrobacterium tumefaciens str. C58] gi|42559508|sp|Q8UGJ8|RECO_AGRT5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|15156061|gb|AAK86847.1| DNA repair protein RecO [Agrobacterium tumefaciens str. C58] Length = 254 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 112/241 (46%), Positives = 167/241 (69%), Gaps = 1/241 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD+AIILGV+ +GE ++I EVMT GRHLG VR+G+S MQP+LQAGN V V WR+ Sbjct: 1 MQWQDEAIILGVKRHGETSVIAEVMTPSRGRHLGMVRSGRSRTMQPVLQAGNRVDVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +LGEFR E L+ +L+ ++ +YG+Q++ L R LPER+P LY L++ L+ Sbjct: 61 RLHDHLGEFRIEPLQLRAGQLMETATAVYGVQAMGALLRLLPERDPHPHLYQALDVILDN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P G++FV+ EL +L ++GFGLDL++C TG+ DL++VSPK+G AVCR+ G PYA Sbjct: 121 LHDPVDAGELFVRFELAVLNDLGFGLDLSECAATGLRSDLIYVSPKTGRAVCRTAGAPYA 180 Query: 181 EKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +ML LP+FL + + + D +SL +AF+LTD+FL+++ ++ + R+ F+ L+ Sbjct: 181 ARMLALPAFLGEGQSKAADPESLAAAFRLTDHFLHRHVYDPRGLNENAARDGFVQAALKA 240 Query: 240 I 240 + Sbjct: 241 L 241 >gi|159042759|ref|YP_001531553.1| DNA repair protein RecO [Dinoroseobacter shibae DFL 12] gi|254790521|sp|A8LLE2|RECO_DINSH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|157910519|gb|ABV91952.1| DNA repair protein RecO [Dinoroseobacter shibae DFL 12] Length = 241 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 76/243 (31%), Positives = 119/243 (48%), Gaps = 7/243 (2%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M W+++ ++L VR +GE ++I+E TR +GRHLG VR G S ++ P+LQ G + + W+ Sbjct: 1 MIEWREEGVLLSVRPHGETSVIVEAFTRAHGRHLGVVRGGVSRKLAPVLQPGAQLDLRWK 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFL 118 +RL ++G F E + A +L L L + S + L RF L ER YD L Sbjct: 61 ARLEDHMGAFTVEPVRGRAAAVLGDRLALSAMSSALALARFSLAERAAYPGFYDQTVALL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + ++ E+ LL +GFGLDL+ C V GV +DL +VSP++G AV R Sbjct: 121 DALAEGTGWLPAYLDWEMALLDQMGFGLDLSGCAVRGVNEDLAFVSPRTGRAVSRQAAGA 180 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLGKL 236 + +++L LP + + T +FL + L R F+ L Sbjct: 181 WVDRLLPLPEVML--GGPAHLHGVLEGLTTTGHFLE-HKLAPALGNRPPPEARARFIDVL 237 Query: 237 LEL 239 Sbjct: 238 SRA 240 >gi|126733738|ref|ZP_01749485.1| DNA repair protein RecO [Roseobacter sp. CCS2] gi|126716604|gb|EBA13468.1| DNA repair protein RecO [Roseobacter sp. CCS2] Length = 244 Score = 178 bits (450), Expect = 7e-43, Method: Composition-based stats. Identities = 80/242 (33%), Positives = 121/242 (50%), Gaps = 4/242 (1%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M W+ +A +L R +GE +I+EV + +GRH G VR G S ++ P+LQ G + V W+ Sbjct: 1 MIEWRSEAALLSSRPFGENGVIIEVFSALHGRHAGVVRGGASRKLAPVLQPGAQLSVAWK 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFL 118 +RL +LG F E + S A + L L GL ++ L LPERE LY+ L Sbjct: 61 ARLESHLGSFAVEPIRSRAAAAMGDRLALAGLNAVCSLLAMVLPEREAHEPLYERTIALL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + V +++ E LL+ +GF +DL+ C V GV +DL++VSPKSG AV R Sbjct: 121 DLLGQQDVWPLAYLRWEQALLEEMGFAMDLSACAVRGVNEDLIYVSPKSGRAVSREAAGE 180 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQ-HNIIHCHLLRENFLGKLL 237 +A++ML LP L + + A T YF+ ++ R L ++ Sbjct: 181 WADRMLPLPEVLTGKGDA-SNAQIAKALGTTGYFIEHRLIKGLGDRPMPAARTRLLDAIM 239 Query: 238 EL 239 Sbjct: 240 RA 241 >gi|154247809|ref|YP_001418767.1| DNA repair protein RecO [Xanthobacter autotrophicus Py2] gi|238686793|sp|A7IM67|RECO_XANP2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|154161894|gb|ABS69110.1| DNA repair protein RecO [Xanthobacter autotrophicus Py2] Length = 242 Score = 178 bits (450), Expect = 8e-43, Method: Composition-based stats. Identities = 89/240 (37%), Positives = 128/240 (53%), Gaps = 1/240 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ I+LGVR +GE N I+E++TR GRHLG VR G S R P+LQ GN V WR+ Sbjct: 1 MEWTDEGIVLGVRRHGEGNAIVELLTRLRGRHLGMVRGGASRRQAPLLQPGNTVSATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G + E L+ + +G + + LPER+P L+ + L+ Sbjct: 61 RLDEHMGNYALEPAVVRTEVLMRAPHAAFGFTHMAQILHLLPERDPHEGLFLTVGAILDA 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + G++ + EL LL +GFGL+L C TG +DL++VSPKSG AVC G PYA Sbjct: 121 FENRESAGRLLARFELALLAELGFGLELETCAATGRREDLVYVSPKSGRAVCGEAGAPYA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 +++ LP FL A ++ A +LT YFL L+ + R F+ I Sbjct: 181 DRLFALPRFLVDGTAPP-AGDVEDALRLTGYFLLTRVLEPRGLGLSDARAAFISAWRRSI 239 >gi|328543511|ref|YP_004303620.1| DNA repair protein recO [polymorphum gilvum SL003B-26A1] gi|326413255|gb|ADZ70318.1| DNA repair protein recO [Polymorphum gilvum SL003B-26A1] Length = 253 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 108/242 (44%), Positives = 142/242 (58%), Gaps = 4/242 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W +D IILG RS+GE ++LE+MTR+ GRHLG VR G+S R QP+LQ GNLVR WR+ Sbjct: 1 MEWSEDGIILGTRSHGESGVVLELMTRRRGRHLGLVRGGRSRRQQPVLQPGNLVRATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R+A LG F E L+ L+ S+L L+ LQ + L R LPER+ LYD L I L+ Sbjct: 61 RIADQLGAFTVEPLQLRAGALMDSALALHALQHLAGLLRLLPERDAHERLYDALTIVLDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + G + V+ EL LL +GFGLDLT+C TG DL +VSPKSG AV R G PY Sbjct: 121 LGEAMIAGPLIVRFELELLNELGFGLDLTRCAATGQLWDLAYVSPKSGRAVSRDAGAPYR 180 Query: 181 EKMLVLPSFLWKE----EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 +++L LPSFL + I + +LT +FL ++ L+ L RE + L Sbjct: 181 DQLLPLPSFLVEGERQPGSEITFADISQGLRLTAFFLARHVLEPQGHAPSLSREELVKAL 240 Query: 237 LE 238 Sbjct: 241 ER 242 >gi|197105330|ref|YP_002130707.1| recombinational DNA repair protein (RecF pathway) [Phenylobacterium zucineum HLK1] gi|254764651|sp|B4RCU1|RECO_PHEZH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|196478750|gb|ACG78278.1| recombinational DNA repair protein (RecF pathway) [Phenylobacterium zucineum HLK1] Length = 243 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 78/240 (32%), Positives = 119/240 (49%), Gaps = 1/240 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M ++DDA +L R++GE I+E++T +GR+ V G S +++P LQ G V +R+ Sbjct: 1 MEFEDDAFVLAARAHGETGAIVELLTSAHGRYAAHVAGGASRKVRPFLQPGARVIARYRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLNIFLN 119 R++ LG E + A L L L GL + + P + Sbjct: 61 RVSDQLGSAAIEPVGEGPAALFDDPLALSGLSAAAAVAAGALPEREPHPGAFLAFEALTG 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 P V +FV+ E LL+++GFGLDL+KC TG+T DL+WVSP++G AV R G PY Sbjct: 121 ALTHPDVWPAVFVRFEAGLLQDLGFGLDLSKCAATGITDDLVWVSPRTGRAVSRQAGEPY 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +++L LP FL + + A + + LT +FL + R L +L E Sbjct: 181 KDRLLALPPFLLSAQGGLRAGDVAAGLALTGHFLEAFIFGPLNRPLPPARLWLLDRLSEA 240 >gi|217979938|ref|YP_002364085.1| DNA repair protein RecO [Methylocella silvestris BL2] gi|254764645|sp|B8EMP4|RECO_METSB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|217505314|gb|ACK52723.1| DNA repair protein RecO [Methylocella silvestris BL2] Length = 247 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 88/232 (37%), Positives = 130/232 (56%), Gaps = 3/232 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +I+GVR YGE ++ILE MTR +GRHLG VR G+S RM+ +LQ GN + WR+ Sbjct: 1 MEWRDEGLIIGVRQYGEASVILEAMTRGHGRHLGLVRGGRSQRMRAVLQPGNSAELVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL + LG + E + A L++S+ L+ + I L R + ER+P +LY+ + Sbjct: 61 RLDEQLGTWAIEPTQLRAATLMASAEALHAVGLICALLRLIAERDPHPDLYETAVLIAGH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + V++E+ +L+ GFGLDL++C TG +DL +VSPKSG AV + G PY Sbjct: 121 IGDERLAP-LLVRLEIEILRETGFGLDLSRCAATGAREDLAYVSPKSGRAVSLAAGAPYR 179 Query: 181 EKMLVLPSFLWKE--EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRE 230 E++L LP FL E + F LT +FL + R Sbjct: 180 ERLLPLPPFLRDEAPGGEPTPQDVLDGFGLTGFFLKRDVFTPRGQGMPEARR 231 >gi|170748446|ref|YP_001754706.1| DNA repair protein RecO [Methylobacterium radiotolerans JCM 2831] gi|170654968|gb|ACB24023.1| DNA repair protein RecO [Methylobacterium radiotolerans JCM 2831] Length = 239 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 103/233 (44%), Positives = 140/233 (60%), Gaps = 1/233 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DDA++LG+R +GE +ILE MT +GRHLG V G+S RMQP+LQAGN VR+ WR+ Sbjct: 1 MQWTDDALVLGLRRHGETGVILEAMTEAHGRHLGLVHGGRSRRMQPVLQAGNRVRLTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL + LG + E L+S ++L+ SSL LYG+ + L R LPER+P LY+ I + Sbjct: 61 RLDEGLGSYAVEPLDSQVSRLIGSSLALYGMNHMAALLRLLPERDPHPALYEAAGILVEH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+V + V+ EL +L +GFGLDLT C TG L +VSPKSG AV S G PY Sbjct: 121 LDDPAVAPPLMVRFELAILSELGFGLDLTACAATGGNDALAYVSPKSGRAVSASAGEPYR 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +++L LP+FL D + F LT YFL+++ + R F+ Sbjct: 181 DRLLALPTFLHAGGSPG-PDGVAQGFTLTGYFLDRHVWGPRGLGPPEERARFV 232 >gi|83951646|ref|ZP_00960378.1| DNA repair protein RecO [Roseovarius nubinhibens ISM] gi|83836652|gb|EAP75949.1| DNA repair protein RecO [Roseovarius nubinhibens ISM] Length = 257 Score = 176 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 76/242 (31%), Positives = 128/242 (52%), Gaps = 5/242 (2%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M W+D ++L VR +GE ++I++V+T+ +GR+ G VR G S +++P+LQ G + + WR Sbjct: 1 MIEWRDRGLLLAVRPHGETSVIIDVLTQDHGRYAGVVRGGTSRKLRPVLQPGAELDLVWR 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFL 118 +RL ++G F E + + A L L GL ++ + RF L ERE L++ L Sbjct: 61 ARLDSHMGAFTVEPIRASLAVGLGVRQALAGLNAVTAMLRFALAEREAHGPLFERSLGLL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVCRSVGL 177 + ++ E+ LL +GFGLDL+ C V G DL +VSP++G AV R Sbjct: 121 EMIGEAELWPLAYLHWEMALLDELGFGLDLSTCAVLGREANDLSFVSPRTGRAVSRKGAG 180 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYAL-QHNIIHCHLLRENFLGKL 236 +A+++L LP+ L E A+ L F +T +FL+++ + R+ + + Sbjct: 181 EWADRLLPLPNCLL-EIAPAPAEDLVQGFAVTGHFLSQHLAGEMQGKPLPDARQRLIDLV 239 Query: 237 LE 238 Sbjct: 240 AR 241 >gi|302383088|ref|YP_003818911.1| DNA repair protein RecO [Brevundimonas subvibrioides ATCC 15264] gi|302193716|gb|ADL01288.1| DNA repair protein RecO [Brevundimonas subvibrioides ATCC 15264] Length = 243 Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 79/239 (33%), Positives = 128/239 (53%), Gaps = 1/239 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + ++A +L R++G+ ++++++T +GRH +V G S RM+P LQAG V ++R+ Sbjct: 1 MEFHEEAFVLSARAHGDTGVVVDLLTETHGRHAAYVAGGASRRMKPFLQAGARVIADYRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + +LG R E + + L + LPEREP + ++ Sbjct: 61 RTSDHLGSARLEPVGEGPSALFDDGLALAGLSAAAAVAQGALPEREPHPGAFLAFEALMS 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 +IP+V IFV+ E LL+++GFGLDL++C VTG DL+WVSP++G +V S G PY Sbjct: 121 AFQIPAVWPAIFVRFEAGLLEDLGFGLDLSRCAVTGTMDDLVWVSPRTGRSVSASAGAPY 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 A+K+L LP F+ + + +K LT +FL ++ R + KL E Sbjct: 181 ADKLLKLPPFMLGAQAGLRDGDVKDGLDLTGHFLEQFVFHPQNKPLPTSRTWMIDKLGE 239 >gi|209964784|ref|YP_002297699.1| DNA repair protein RecO, putative [Rhodospirillum centenum SW] gi|238058647|sp|B6IMY9|RECO_RHOCS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|209958250|gb|ACI98886.1| DNA repair protein RecO, putative [Rhodospirillum centenum SW] Length = 250 Score = 175 bits (442), Expect = 6e-42, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 123/242 (50%), Gaps = 5/242 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DDAI+L R +GE + ++TR +GRH G V GQS RM+P+L+ GN V W + Sbjct: 1 MEWTDDAIVLSARPHGETAALAVLLTRGHGRHAGLVHGGQSGRMRPVLEPGNRVAARWAA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL + LG E+ + A LL L L L S L LPEREP L+D + Sbjct: 61 RLVEQLGTLALELERATAAGLLEDPLRLAALSSACALVDAALPEREPHPALFDATLALFD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD--LLWVSPKSGGAVCRSVGL 177 + I+V+ E+ LL+ GFGLD C TG+T + L +VSP++G AV S G Sbjct: 121 ALQTEVWAE-IYVRWEIGLLEEAGFGLDFGSCAATGITDNDQLAYVSPRTGRAVSLSAGE 179 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 PY +++L LP FL A+ + LT +FL+++ R F+ + Sbjct: 180 PYRDRLLALPPFLVGRSAGG-AEEVVQGLALTGHFLDRHLFALRHAEVPAARTRFVDRYR 238 Query: 238 EL 239 + Sbjct: 239 KA 240 >gi|220923264|ref|YP_002498566.1| DNA repair protein RecO [Methylobacterium nodulans ORS 2060] gi|254764644|sp|B8IL75|RECO_METNO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|219947871|gb|ACL58263.1| DNA repair protein RecO [Methylobacterium nodulans ORS 2060] Length = 246 Score = 173 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 96/238 (40%), Positives = 136/238 (57%), Gaps = 5/238 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ ++LG R +GE +++LE+MT +GRHLG V G+S RMQP+LQ GN VR WR+ Sbjct: 1 MQWSDEGLVLGARRHGETSVVLELMTAGHGRHLGLVHGGRSRRMQPVLQPGNRVRAVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL + LG F E +ES +L+ S L LYGL L R LPER+P LY + + Sbjct: 61 RLDEGLGHFAVEPIESAAGRLMGSRLALYGLAHAAALLRLLPERDPHPSLYAAAQVLVAH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P++ + V+ EL +L ++GFGLDL+ C TG L +VSPKSG AV + G P+ Sbjct: 121 LTDPAIAPALMVRFELAVLADLGFGLDLSACAATGSNAYLAYVSPKSGRAVSAAAGEPWR 180 Query: 181 EKMLVLPSFLW-----KEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +++L LP FL T ++ F LT YFL+++ + RE F+ Sbjct: 181 DRLLALPDFLVAREAGGTGATPTPRDVRQGFTLTGYFLDQHVWHPRGVAPPEARELFV 238 >gi|296444472|ref|ZP_06886437.1| DNA repair protein RecO [Methylosinus trichosporium OB3b] gi|296258119|gb|EFH05181.1| DNA repair protein RecO [Methylosinus trichosporium OB3b] Length = 240 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 90/234 (38%), Positives = 138/234 (58%), Gaps = 1/234 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +++GVR +GE +ILE+MTR +GRH+G VR G ++ +LQ GN V V WR+ Sbjct: 1 MEWRDEGLVIGVRRHGESAVILELMTRAHGRHMGLVRGGSGRALRSVLQVGNSVEVLWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F E L S A+L+ + L+G+ + L R LPER+ EL++M + + Sbjct: 61 RLEEHLGAFAVEPLRSRAARLIDRAFALHGVAHLAALLRLLPERDAQRELFEMAELIADR 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + + EL LL+ +GFGLD+ +C +TG TQDL +VSPK+G AV R G P+ Sbjct: 121 LDSLDLAPALMARFELALLQALGFGLDVERCALTGATQDLAFVSPKTGRAVTRDAGAPWR 180 Query: 181 EKMLVLPSFLWK-EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +++L P FL DA L +AF+LT +FL + + R ++ Sbjct: 181 DRLLPFPPFLQDCARAPADASELAAAFRLTGHFLARDVFTPRGLEAPQARALYV 234 >gi|167645704|ref|YP_001683367.1| DNA repair protein RecO [Caulobacter sp. K31] gi|189039651|sp|B0T3I3|RECO_CAUSK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|167348134|gb|ABZ70869.1| DNA repair protein RecO [Caulobacter sp. K31] Length = 243 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 75/240 (31%), Positives = 123/240 (51%), Gaps = 1/240 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+A +L R +GE I+E++T++ G+ + V S RM+P LQAG V +R+ Sbjct: 1 MEWEDEAFVLSARVHGETGAIVELLTQERGKFVAHVSGAASRRMKPFLQAGAKVIARYRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSL-FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R++ +G E + + L L + LPERE + L + Sbjct: 61 RMSDQMGAATLEPMGEGPSSLFDEPLALSGLSAAASVAAGALPEREAHPGAFHALEALIA 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 IP++ ++V+ E LL+++GFGLDL+KC TG DL++VSP++G AV R+ G PY Sbjct: 121 ALAIPAIWPAVYVRFEAGLLQDLGFGLDLSKCAATGSLDDLVYVSPRTGRAVSRAAGQPY 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +K+L LP F+ + + +K+ +T +FL ++ R L +L E Sbjct: 181 HDKLLPLPPFMLSAQGGLVEGDVKAGLDITGHFLEQFVFHPLNRPLPPARVWLLDRLGEA 240 >gi|254420124|ref|ZP_05033848.1| DNA repair protein RecO [Brevundimonas sp. BAL3] gi|196186301|gb|EDX81277.1| DNA repair protein RecO [Brevundimonas sp. BAL3] Length = 243 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 76/239 (31%), Positives = 127/239 (53%), Gaps = 1/239 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + ++A +L R++G+ +++++T +GR +V G S +M+P LQAG V ++R+ Sbjct: 1 MDFHEEAFVLSARAHGDTGAVVDLLTESHGRRAAYVAGGASRKMRPFLQAGARVVADYRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLNIFLN 119 R + +LG R E + + L +L L GL + + + P ++ + Sbjct: 61 RTSDHLGGARLEPVGEGPSALFDDALALTGLAAAAGVAQGALPEREPHPGVFLAFEALMA 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 +P V IFV+ E LL+++GFGLDL+KC TG DL++VSP++G AV R G PY Sbjct: 121 AFALPDVWPAIFVRFEAGLLEDLGFGLDLSKCAATGTADDLIYVSPRTGRAVSREAGAPY 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 A+KML LP F+ + + +++ F LT +FL ++ R L +L E Sbjct: 181 ADKMLSLPPFMLGAQAGLVEGDVRAGFDLTGHFLEQFVFHPQNKPLPAARVWMLDRLAE 239 >gi|329850744|ref|ZP_08265589.1| DNA repair protein RecO [Asticcacaulis biprosthecum C19] gi|328841059|gb|EGF90630.1| DNA repair protein RecO [Asticcacaulis biprosthecum C19] Length = 244 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 78/235 (33%), Positives = 115/235 (48%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 ++D+AI+L + +GE IL V+T +G + V G S RM+ LQ G V +R+R Sbjct: 3 EFEDEAIVLSAKLHGESGAILHVLTENHGVYAAHVAGGASRRMKAALQPGASVLFRFRAR 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 ++ LG E S L S L + + + LPERE Y L+ L Sbjct: 63 HSEQLGTASVEASGSGPDVLDDSVALLGLQCACLMTRQVLPERERHPGAYYALSALLGAF 122 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 P + I+V+ E LL+ +G+GLDL+ C VTG DL++VSPKS AV R G Y + Sbjct: 123 VAPDIWPAIYVRYEAGLLEELGYGLDLSACAVTGSRDDLVYVSPKSARAVSRGAGEAYRD 182 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 K+LVLP FL + + A + LT +FL ++ + +R L Sbjct: 183 KLLVLPQFLLSSQGGLIAGDVGRGLALTGFFLERHVFHPHNKPLPDVRLRLAEAL 237 >gi|89053018|ref|YP_508469.1| DNA repair protein RecO [Jannaschia sp. CCS1] gi|119361461|sp|Q28V18|RECO_JANSC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|88862567|gb|ABD53444.1| DNA repair protein RecO [Jannaschia sp. CCS1] Length = 244 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 78/243 (32%), Positives = 123/243 (50%), Gaps = 7/243 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+ D I+L VR +GE + I+E+ T G HLG VR G S +M P+LQ G + WR+ Sbjct: 1 MDWRADGILLAVRRHGEASAIIELFTADQGCHLGVVRGGASRKMAPLLQVGAQLDATWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 RL+ ++G + E+++ A+++ + L GL S+ L F LPER L+ L+ Sbjct: 61 RLSDHIGSYTVELVKGRAAEVMEDRVALAGLSSVCALLSFSLPERAAYPGLFARTLAVLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 E+ LL +GFGLDL++C TGVTQDL ++SP++G AV R+ + Sbjct: 121 GLGAERWAEAYLG-WEMALLTEMGFGLDLSQCAATGVTQDLAFISPRTGRAVSRAAAGEW 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLGKLL 237 A+++L L L E + + + +T +FL L R+ + L Sbjct: 180 ADRLLPLSPAL--EGMARGPEDILAGLAVTGHFLA-THLAPSLGDKPLPAARQRLIDALE 236 Query: 238 ELI 240 + Sbjct: 237 RQV 239 >gi|126726092|ref|ZP_01741934.1| DNA repair protein RecO [Rhodobacterales bacterium HTCC2150] gi|126705296|gb|EBA04387.1| DNA repair protein RecO [Rhodobacterales bacterium HTCC2150] Length = 245 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 80/241 (33%), Positives = 120/241 (49%), Gaps = 4/241 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D I+ VR +GE + I+EV T+ GRH G VR S ++ P LQ G V V+WR+ Sbjct: 1 MEWRDQGAIISVRHHGETSAIVEVFTKNQGRHAGVVRGATSRKIAPFLQPGGQVDVSWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG F E ++S + + L LPERE LY+ L+ Sbjct: 61 RLNEHLGTFTIEPIQSRAHVMSNPLALAGLNAVCALLQFTLPERESHPRLYETSIALLDS 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 S ++ E++LL ++GFGLDL++C VTG DL +VSPKSG AV +S +A Sbjct: 121 ISETSDWPLDYLHWEMLLLDDLGFGLDLSECAVTGTQGDLAYVSPKSGRAVSKSGAGEWA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH--NIIHCHLLRENFLGKLLE 238 +++L L L + ++ L + T +FL + L R + +L Sbjct: 181 DRLLPLTPCLI-SDASVGVTELIEGLRTTGHFLENH-LAPELGNRPLPEARARMIDRLGR 238 Query: 239 L 239 L Sbjct: 239 L 239 >gi|254780948|ref|YP_003065361.1| DNA repair protein RecO [Candidatus Liberibacter asiaticus str. psy62] gi|254040625|gb|ACT57421.1| DNA repair protein RecO [Candidatus Liberibacter asiaticus str. psy62] Length = 240 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 240/240 (100%), Positives = 240/240 (100%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS Sbjct: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC Sbjct: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA Sbjct: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI Sbjct: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 >gi|288958668|ref|YP_003449009.1| DNA repair protein RecO [Azospirillum sp. B510] gi|288910976|dbj|BAI72465.1| DNA repair protein RecO [Azospirillum sp. B510] Length = 240 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 82/236 (34%), Positives = 116/236 (49%), Gaps = 6/236 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D I+L R GE + + ++TR +GRH G V G+S R + L+ G LV WR Sbjct: 1 MDWSDQGIVLSARPQGEGSAVATLLTRGHGRHAGMVMGGRSARQRGTLEPGTLVHARWRG 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL ++LG F E + + A + L L S L LPERE L+D L + Sbjct: 61 RLPEHLGHFTLEPVRGYAAGFFDDAQALAALTSACALVEAALPEREAHPALFDGLLVLFG 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 P+ +V+ E+ LL +GFGLDL +C V+G L +VSP++G AV SVG PY Sbjct: 121 LLDSPAWAE-TYVRWEVGLLAELGFGLDLDRCAVSGANDYLAYVSPRTGRAVTASVGEPY 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 +++L LP FL A +LT +FL ++ L RE + Sbjct: 180 RDRLLPLPDFLAGRGGGGPAAV-ADGLRLTAHFLERHLL---NGPLPPARERLRER 231 >gi|170742438|ref|YP_001771093.1| DNA repair protein RecO [Methylobacterium sp. 4-46] gi|168196712|gb|ACA18659.1| DNA repair protein RecO [Methylobacterium sp. 4-46] Length = 267 Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 96/238 (40%), Positives = 134/238 (56%), Gaps = 5/238 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D+ ++LG R GE ++LE+MT +GRHLG V G+S RMQP+LQ GN VR WR+ Sbjct: 22 MQWSDEGLVLGARRLGETGVVLELMTAAHGRHLGLVHGGRSRRMQPVLQPGNRVRAVWRA 81 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL LG F E L+S +L+ S L LYGL L R LPER+P LY+ + ++ Sbjct: 82 RLDDGLGSFAVEPLDSAAGRLIGSRLALYGLAHAAALLRLLPERDPHPGLYEAARVLIDH 141 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ + V+ EL +L +GFGLDL+ C TG L +VSPKSG AV + G P+ Sbjct: 142 LADAAIAPPLMVRFELAVLAELGFGLDLSACAATGSNAYLAYVSPKSGRAVSAAAGEPWR 201 Query: 181 EKMLVLPSFLW-----KEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +++L LP FL T A ++ F LT YFL+++ + RE F+ Sbjct: 202 DRLLALPDFLVAREAGGTGATPTARDVRQGFTLTGYFLDQHVWAPRGLAPPEARERFV 259 >gi|296116242|ref|ZP_06834859.1| putative DNA repair protein recO [Gluconacetobacter hansenii ATCC 23769] gi|295977176|gb|EFG83937.1| putative DNA repair protein recO [Gluconacetobacter hansenii ATCC 23769] Length = 265 Score = 171 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 78/246 (31%), Positives = 127/246 (51%), Gaps = 6/246 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+ A++L YGE ++I V+T ++G + G VR G + + +P+ QAGNL+ W + Sbjct: 7 MEWEAPALVLSAVPYGESSMIAHVLTGEHGLYHGMVRGGGARQGRPVWQAGNLITARWNA 66 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLN 119 RL + LG R E++ + A++L + L L S+ L LPEREP L +++ L L Sbjct: 67 RLPEQLGSLRGELVHASAARVLEYAHPLAMLASLCALADSSLPEREPHLAVFEELTRLLA 126 Query: 120 CH-----KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + ++ E++LL ++GFGLDL+ C V+G DL WVSP+SG AV Sbjct: 127 RISLEPAEAERSGMAALIRWEMLLLSDLGFGLDLSCCAVSGQADDLAWVSPRSGRAVSDG 186 Query: 175 VGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 + +++L+LP FL Q + + +LT +FL + A R L Sbjct: 187 HAGQWRDRLLMLPPFLLDPTQDGTPEQWLAGLRLTGHFLARDAFGQRHRPLPAARIRLLD 246 Query: 235 KLLELI 240 + ++ Sbjct: 247 MVGRMV 252 >gi|315122361|ref|YP_004062850.1| DNA repair protein RecO [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495763|gb|ADR52362.1| DNA repair protein RecO [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 240 Score = 171 bits (432), Expect = 9e-41, Method: Composition-based stats. Identities = 182/240 (75%), Positives = 217/240 (90%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+WQDDAI+LGVRSYGEKNIILEVMTR YGRHLGFVR GQS R+QP+LQ GNLVRVNWRS Sbjct: 1 MHWQDDAIVLGVRSYGEKNIILEVMTRHYGRHLGFVRYGQSRRIQPVLQVGNLVRVNWRS 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL Q+LGEFR E++E C+KLLSS++ LYGLQS++P+FRFLPER+PC +LYD+LN+F+N Sbjct: 61 RLEQDLGEFRLEIIEYRCSKLLSSAISLYGLQSMIPIFRFLPERDPCPDLYDLLNLFINS 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 HKI S++GKIF+QIEL+LLKNIGFGL++TKCVVTGV+ DL WVSPKSGGA+C S+GLPYA Sbjct: 121 HKISSILGKIFIQIELILLKNIGFGLEITKCVVTGVSHDLSWVSPKSGGAICHSLGLPYA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 KMLVLP FLWKE+Q IDADSL++AF+LT YFL+KYA QHNIIHC+ LR NFL KL+EL+ Sbjct: 181 SKMLVLPLFLWKEQQNIDADSLRNAFRLTGYFLDKYAFQHNIIHCNSLRINFLNKLIELL 240 >gi|222148084|ref|YP_002549041.1| DNA repair protein RecO [Agrobacterium vitis S4] gi|221735072|gb|ACM36035.1| DNA repair protein RecO [Agrobacterium vitis S4] Length = 264 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 110/245 (44%), Positives = 160/245 (65%), Gaps = 5/245 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D AI+LG R +GE ++I E+MT GRHLG VR G+S MQP+LQ GN+V V WR+ Sbjct: 1 MEWTDQAIVLGARRHGETSVIAEMMTLARGRHLGLVRGGRSRTMQPVLQPGNVVEVTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG+FR E L+ L+SS+ +YG+Q++ L R LPEREP LY+ +NI L+ Sbjct: 61 RLEEHLGDFRVEPLQLRAGHLMSSATAVYGVQALASLLRLLPEREPHGHLYEAMNIILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++F++ EL +L ++GFGLDLT C TG QDL++VSPK+G AV + GLPYA Sbjct: 121 LHEPASAGELFIRFELAILNDLGFGLDLTACAATGGRQDLVFVSPKTGRAVSHAAGLPYA 180 Query: 181 EKMLVLPSF-----LWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 +++L LP F L +++ DA +L+ AF+LT YFL ++ + + R+ F Sbjct: 181 DRLLTLPVFLQPEPLVGKDKQADAQALQQAFRLTGYFLQRHVYEPRGLTAGAARDGFCQA 240 Query: 236 LLELI 240 L+ + Sbjct: 241 ALKAL 245 >gi|154253316|ref|YP_001414140.1| DNA repair protein RecO [Parvibaculum lavamentivorans DS-1] gi|154157266|gb|ABS64483.1| DNA repair protein RecO [Parvibaculum lavamentivorans DS-1] Length = 234 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 85/228 (37%), Positives = 126/228 (55%), Gaps = 1/228 (0%) Query: 10 LGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEF 69 L R++GE ILE+ TR+ GRHLG V G RM+ +LQ GN + +WR RL+++LG + Sbjct: 2 LSARAHGETGAILELFTREQGRHLGLVHGGAGRRMRSVLQPGNKLAAHWRGRLSEHLGTY 61 Query: 70 RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGK 129 + E+++ L+ L L GL + + LPERE LYD + L+ + V Sbjct: 62 QVELVKPLAGLLMDDPLALLGLSAASAICSILPEREAHPALYDGYEVLLDTMRDEDVWPA 121 Query: 130 IFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSF 189 +FV+ EL LL+ +GFGLDLT+C TG DL +VSP+SG AV R G Y E++ LP F Sbjct: 122 VFVRWELGLLQELGFGLDLTQCAATGSRDDLAYVSPRSGSAVSRGAGEIYKERLFRLPGF 181 Query: 190 LWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 L + +A + +LT +FL ++ + H R + K+ Sbjct: 182 LVGSQAGAAEAADVAEGLRLTGHFLERHLFAAHERHLPDARIRLMEKM 229 >gi|307946583|ref|ZP_07661918.1| DNA repair protein RecO [Roseibium sp. TrichSKD4] gi|307770247|gb|EFO29473.1| DNA repair protein RecO [Roseibium sp. TrichSKD4] Length = 256 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 95/220 (43%), Positives = 133/220 (60%), Gaps = 4/220 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W I+LG R +GE ++ILEVMT YGRHLG VR G+S QP +Q GN ++V WR+ Sbjct: 1 MEWTATGIVLGSRKHGENDVILEVMTETYGRHLGLVRGGRSRTRQPQIQPGNELQVTWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL + LG + E L A+L++S L L+G+Q + L R LPER+P LY L + L+ Sbjct: 61 RLPEQLGTYSIEPLRLRAAELMASPLGLHGVQHLGALLRMLPERDPHAALYRALTLVLDQ 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + + ++ EL LL +GFGLDL+ C TG +DL +VSPKSG AV R G PY Sbjct: 121 LQDGDIGPPLLIRFELELLNELGFGLDLSCCAATGSQEDLAYVSPKSGRAVSRDAGQPYH 180 Query: 181 EKMLVLPSFLWKEEQTID----ADSLKSAFQLTDYFLNKY 216 +K+L LP FL ++ L + F+LT +FL ++ Sbjct: 181 DKLLPLPDFLIDGQRQPGSELLFKDLSNGFKLTRFFLARH 220 >gi|114799258|ref|YP_759606.1| DNA repair protein RecO [Hyphomonas neptunium ATCC 15444] gi|122942647|sp|Q0C3T7|RECO_HYPNA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|114739432|gb|ABI77557.1| DNA repair protein RecO [Hyphomonas neptunium ATCC 15444] Length = 243 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 79/239 (33%), Positives = 116/239 (48%), Gaps = 3/239 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I+LG R +GE +IL+V+TR+ GR G V G S R + +AGN + ++W Sbjct: 1 MNWSDDGIVLGGRRFGEGGLILDVLTREKGRRSGLVYGGASRRKRAQFEAGNTIALSWTG 60 Query: 61 RLAQNLGEFRFEVL-ESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC--LELYDMLNIF 117 RL LG F + ++LL L L +I L R LY+ + Sbjct: 61 RLDDQLGRFDVAEARKDRASRLLDDPAALAALSAITSLLRGGLNEGDAAGSSLYEATTLL 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L+ P+V ++V+ EL LL +GFGLDL +C V+G L VSP++G AV S Sbjct: 121 LDQLTEPNVWPALYVRWELGLLSALGFGLDLDECAVSGANDGLTHVSPRTGRAVRGSEAE 180 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 PY +++ LPSFL + + + +LT YF+ RE L ++ Sbjct: 181 PYVDRLFALPSFLIDPRADVLPGDIAAGLRLTGYFIEGRLFGSVHRGLPPERERLLKRI 239 >gi|312115948|ref|YP_004013544.1| DNA repair protein RecO [Rhodomicrobium vannielii ATCC 17100] gi|311221077|gb|ADP72445.1| DNA repair protein RecO [Rhodomicrobium vannielii ATCC 17100] Length = 241 Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats. Identities = 83/240 (34%), Positives = 120/240 (50%), Gaps = 3/240 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD I L R +GE ++I ++ TR GR G V+ G+S R++P+LQ GN + V WR+ Sbjct: 1 MRWADDGIFLAGRPHGETSVIADIFTRANGRAKGLVKGGRSRRLRPLLQTGNTLGVEWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL LG + E+ + A L L G+ ++ L + L ER+P LYD L Sbjct: 61 RLDDQLGVYTVELARATAANALDDPSALAGMTALAALLQVLAERDPHPALYDAAQDCLAH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + F++ EL L +GFGL+L C TG DL++VSPKSG AVCR G PYA Sbjct: 121 -ASDASFPAAFIRFELRFLNELGFGLNLATCAATGRADDLIYVSPKSGQAVCREAGEPYA 179 Query: 181 EKMLVLP--SFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +++L LP +++ LT +FL + + R+ F L Sbjct: 180 DRLLPLPAFLANAASAAAPSDAEIEAGLLLTGHFLAVHVFAESGKPLPTARDEFARTLRR 239 >gi|260576291|ref|ZP_05844283.1| DNA repair protein RecO [Rhodobacter sp. SW2] gi|259021559|gb|EEW24863.1| DNA repair protein RecO [Rhodobacter sp. SW2] Length = 238 Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats. Identities = 80/239 (33%), Positives = 113/239 (47%), Gaps = 2/239 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D +L VR +GE I+EV T +GRH G VR G S R+ P+LQ G + V WR+ Sbjct: 1 MEWRDQGALLSVRPHGESAAIIEVFTAAHGRHAGVVRGGASRRIAPLLQPGAQLDVVWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++G F E + S L + LPER P LY L+ Sbjct: 61 RLEGHIGAFTVEPVRSRAGVLGDRLALAGLNAICAMVRVALPERAPHDLLYAATIAVLDA 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + +++ EL+LL+ +GFGLDL +C VTG DL +VSPK+G AV R +A Sbjct: 121 LETAPDWPARYLRWELLLLEELGFGLDLGRCAVTGSRDDLAYVSPKTGRAVSRDGAGEWA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNII-HCHLLRENFLGKLLE 238 ++L LP L + L + +T +FL + + H R L L Sbjct: 181 ARLLPLPDCLLGQG-PASGADLAAGLAVTGHFLTREMASLRHVQHLPEARARLLELLAR 238 >gi|118587959|ref|ZP_01545369.1| DNA repair protein RecO [Stappia aggregata IAM 12614] gi|118439581|gb|EAV46212.1| DNA repair protein RecO [Stappia aggregata IAM 12614] Length = 251 Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats. Identities = 88/225 (39%), Positives = 130/225 (57%), Gaps = 4/225 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W ++L R +GE ++ILE MT +GRHLG VR G+S R +P+LQ GN + + W++ Sbjct: 1 MEWSGRGVVLTTRKHGENDVILEAMTLDHGRHLGLVRGGRSRRHRPVLQPGNELTLTWKA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL+ +LG+F E L++SSL L LQ + L R LPER L++ L + L+ Sbjct: 61 RLSDHLGQFHIEPETLRAGDLMTSSLGLAALQHLAFLLRLLPERHTYPRLFNALTVVLDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + ++ EL +L+++G GLDL+ C TG +DL +VSPKS AVCR GLPY Sbjct: 121 LEASDAAAALLIRFELEVLRDLGIGLDLSSCAATGSNEDLAYVSPKSARAVCREAGLPYH 180 Query: 181 EKMLVLPSFLWKE----EQTIDADSLKSAFQLTDYFLNKYALQHN 221 +++L LP FL + + F LT +FLN+Y +H Sbjct: 181 DRLLPLPGFLLDGQRQAGSELTWADVTQGFDLTSFFLNRYLQEHG 225 >gi|162148788|ref|YP_001603249.1| DNA repair protein recO [Gluconacetobacter diazotrophicus PAl 5] gi|189039658|sp|A9HRQ4|RECO_GLUDA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|161787365|emb|CAP56960.1| putative DNA repair protein recO [Gluconacetobacter diazotrophicus PAl 5] Length = 254 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 69/242 (28%), Positives = 113/242 (46%), Gaps = 6/242 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+ A++L YGE + I+ ++T G G R G + + + Q GNL+R +WR Sbjct: 1 MEWEAPALVLSASPYGESSAIVHLLTEDLGLVHGLARGGTARANRALWQPGNLIRASWRG 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL LG E++ A+L+S+ L L L S + LPEREP ++ +L F + Sbjct: 61 RLPDQLGNLSGELVHGSAARLMSAPLALAMLASACAVADGTLPEREPHPRIFHLLTRFFS 120 Query: 120 CHKIPSVIGKIFV-----QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + + + E LL ++G+G+DL+ C VTG + +L WVSP++G AV + Sbjct: 121 LLSLDPDMAGWGGMAALLRWEACLLGDLGYGMDLSACAVTGGSAELAWVSPRTGRAVSDA 180 Query: 175 VGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 + ++L LP E + +LT +FL + A R + Sbjct: 181 AAGEWRPRLLRLPPLFLDESDPGTVQDWRDGLRLTGHFLARDAFGQRHRPLPPARLRLVD 240 Query: 235 KL 236 + Sbjct: 241 MI 242 >gi|209545462|ref|YP_002277691.1| DNA repair protein RecO [Gluconacetobacter diazotrophicus PAl 5] gi|209533139|gb|ACI53076.1| DNA repair protein RecO [Gluconacetobacter diazotrophicus PAl 5] Length = 254 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 69/242 (28%), Positives = 113/242 (46%), Gaps = 6/242 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+ A++L YGE + I+ ++T G G R G + + + Q GNL+R +WR Sbjct: 1 MEWEAPALVLSASPYGESSAIVHLLTEDLGLVHGLARGGTARANRALWQPGNLIRASWRG 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RL LG E++ A+L+S+ L L L S + LPEREP ++ +L F + Sbjct: 61 RLPDQLGNLSGELVHGSAARLMSAPLALAMLASACAVADGTLPEREPHPRIFHLLTRFFS 120 Query: 120 CHKIPSVIGKIFV-----QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + + + E LL ++G+G+DL+ C VTG + +L WVSP++G AV + Sbjct: 121 LLSLDPDMAGWGGMAALLRWEACLLGDLGYGMDLSACAVTGGSAELAWVSPRTGRAVSDA 180 Query: 175 VGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 + ++L LP E + +LT +FL + A R + Sbjct: 181 AAGEWRPRLLRLPPLFLNESDPGTVQDWRDGLRLTGHFLARDAFGQRHRPLPPARLRLVD 240 Query: 235 KL 236 + Sbjct: 241 MI 242 >gi|330994746|ref|ZP_08318668.1| DNA repair protein recO [Gluconacetobacter sp. SXCC-1] gi|329758007|gb|EGG74529.1| DNA repair protein recO [Gluconacetobacter sp. SXCC-1] Length = 263 Score = 168 bits (424), Expect = 8e-40, Method: Composition-based stats. Identities = 77/244 (31%), Positives = 115/244 (47%), Gaps = 6/244 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+ A++L YGE + I+ V+T +YG + G R G + R + Q GNLVR W + Sbjct: 1 MEWEAPALVLSATPYGEGSAIVHVLTGEYGLYHGLARGGSASRGRATWQTGNLVRARWTA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLN 119 RL + LG E + + A+LL L L L S+ L LPEREP ++ L L Sbjct: 61 RLPEQLGSITAETVHASAARLLDYPLPLAMLASLCALADDCLPEREPHPAIFQGLTSLLA 120 Query: 120 CHKIPSVIGKI-----FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + + V+ ELMLL ++GFGLDL C + G +DL WVSP++G AV Sbjct: 121 RISLDPQWAETEAMPEIVRWELMLLSDLGFGLDLGGCALGGSREDLRWVSPRTGRAVSDE 180 Query: 175 VGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 + +++L LP F+ +Q +L+ +FL + A R Sbjct: 181 KAGAWRDRLLPLPGFILHPQQVATPRDWHDGLRLSGHFLRRDAFGQRHRPVPEARGRLAD 240 Query: 235 KLLE 238 + Sbjct: 241 MIAR 244 >gi|319405460|emb|CBI79079.1| DNA repair protein RecO [Bartonella sp. AR 15-3] Length = 248 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 105/239 (43%), Positives = 150/239 (62%), Gaps = 1/239 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ AIILG R +GE ++ILE+MTRQ+GR++G V+ G+S RM P+LQ GN V W + Sbjct: 1 MKWKEPAIILGTRQHGETSVILEIMTRQHGRYMGIVKGGRSRRMAPLLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG FR E L+SH ++L+ LY LQ + R LPER+P LYDML F+ Sbjct: 61 RLDEHLGLFRLEALDSHASRLIVLPEALYSLQLMASHLRLLPERDPHPVLYDMLYFFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + ++ V+ EL+LL+ +GFGLDL+ C VTG + L +VSPKSG AVC +G P+ Sbjct: 121 FDDPFINAELLVRFELLLLEELGFGLDLSCCAVTGRQEKLCYVSPKSGRAVCEEIGRPWK 180 Query: 181 EKMLVLPSFLWKEEQ-TIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +K+L+LP FL ++ ID D + LTD+FL +Y + I LR + + Sbjct: 181 DKLLLLPQFLVQKTACPIDFDDINKGLTLTDFFLTRYVWEARGIKQPSLRVSLIQLFER 239 >gi|294084098|ref|YP_003550856.1| DNA repair protein RecO [Candidatus Puniceispirillum marinum IMCC1322] gi|292663671|gb|ADE38772.1| DNA repair protein RecO [Candidatus Puniceispirillum marinum IMCC1322] Length = 250 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 82/240 (34%), Positives = 120/240 (50%), Gaps = 6/240 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 W DA+I+ + +GE + ++ V+T + GRH G VR G S +M+ ILQ GN VRV+WR+R Sbjct: 3 EWVADAVIISAKPHGEGSAVVIVLTAENGRHAGLVRGGSSSKMRGILQPGNRVRVSWRAR 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLNC 120 L LG+ + E++ + A +L +L L G+ S L LPERE LYD N + Sbjct: 63 LIDQLGQMQIELINAIPALMLDDALRLAGIASACALLDGTLPEREAQHALYDGTNALFDL 122 Query: 121 H---KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + +++ EL LL G+ LDLT+C +G + L +VSPKSG A+ Sbjct: 123 MCLDDPDHRWIEGYIRWELGLLNAAGYQLDLTRCAASGAREKLAYVSPKSGCAIALDQAG 182 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 Y ++ML LP FL S LT +FL K + + R +L Sbjct: 183 EYVQRMLTLPVFLGGITNVASDH--VSGLNLTGHFLEKRVFAAHNQDLPIQRRRLADMVL 240 >gi|294678824|ref|YP_003579439.1| DNA repair protein RecO [Rhodobacter capsulatus SB 1003] gi|294477644|gb|ADE87032.1| DNA repair protein RecO [Rhodobacter capsulatus SB 1003] Length = 240 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 80/239 (33%), Positives = 112/239 (46%), Gaps = 2/239 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD IL R +GE + I+EV T +GRHLG VR G S +M +L G+ V V WR+ Sbjct: 1 MDWQDSGTILSTRLHGESSAIVEVFTATHGRHLGVVRGGASRKMAAVLMPGSHVAVAWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL LG F E L S L + L L ER P LY Sbjct: 61 RLEDQLGSFTVEPLASRAGALSDRLALMGLNAVCALLSFVLAERAPHPRLYAATEPLFTV 120 Query: 121 HKI-PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 ++ E+ LL+++GFGLDL++C VTG DL +VSP++G AV R+ + Sbjct: 121 IGQAAEGWVVDYLIWEMALLEDLGFGLDLSRCAVTGTRDDLAFVSPRTGRAVSRAGAGDW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 A K+L LP L + + LT +FL ++A +H+ R + + Sbjct: 181 APKLLPLPLCLLGQG-PATWTEIGQGLTLTGHFLTRFASEHSRKALPEARNRLIAAIAR 238 >gi|146278602|ref|YP_001168761.1| DNA repair protein RecO [Rhodobacter sphaeroides ATCC 17025] gi|172046019|sp|A4WVP2|RECO_RHOS5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|145556843|gb|ABP71456.1| DNA repair protein RecO [Rhodobacter sphaeroides ATCC 17025] Length = 237 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 73/237 (30%), Positives = 113/237 (47%), Gaps = 3/237 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 W+D+ +L VR +GE I+EV T +GRHLG VR G S R P+LQ G + + W++R Sbjct: 3 EWRDEGALLSVRRHGESAAIIEVFTASHGRHLGVVRGGASRRHAPVLQPGAQLDLTWKAR 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 L ++G F E L + L LPEREP + L+ ++ Sbjct: 63 LDDHMGAFTVEPLRARTGIFGDRLALAGLNAICAMLHVVLPEREPHVGLWRESIELMDAL 122 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 +++ E+ LL+ GFGLDLT+C VTG +DL +VSP++G AV R+ +A+ Sbjct: 123 A-APGWPAAYLRWEMRLLEEAGFGLDLTRCAVTGSREDLAFVSPRTGRAVGRAAAGDWAD 181 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 ++ LP L + ++ +T +FL + L R + L Sbjct: 182 RLFPLPLALLGQG-PASGPEVRQGLAITGHFLARE-LPLAGRPLPEARARLIDLLAR 236 >gi|254293710|ref|YP_003059733.1| DNA repair protein RecO [Hirschia baltica ATCC 49814] gi|254042241|gb|ACT59036.1| DNA repair protein RecO [Hirschia baltica ATCC 49814] Length = 290 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 80/239 (33%), Positives = 122/239 (51%), Gaps = 2/239 (0%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 W D AI LG R++GE ++IL+V T GR G V G S + +P+++AGN + V W+++ Sbjct: 3 EWSDTAISLGARTFGETDVILDVFTPSRGRTRGLVYGGISQKKRPMIEAGNTIDVQWKAK 62 Query: 62 LAQNLGEFRFEV-LESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 +LG F + A+ + L L GL ++ + R LPE E LY+ L+ Sbjct: 63 TESSLGHFSVADAINQRAARCMIDPLALAGLSAVTSILRDGLPEGEAKDGLYEATETLLD 122 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 P + IF++ EL L+ +G+GL+L CV++G L VSPKSG AV S Y Sbjct: 123 VMGEPDIWPAIFIKWELGFLQQMGYGLNLETCVISGANDGLTHVSPKSGCAVRGSEAEEY 182 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +K+L LP+FL + + + F+LT YFL + R L +L + Sbjct: 183 IDKLLSLPAFLTDAKAPPSPYDIGAGFKLTGYFLTRRLFADINRDAPEARYLMLERLEK 241 >gi|114327658|ref|YP_744815.1| DNA repair protein recO [Granulibacter bethesdensis CGDNIH1] gi|122327371|sp|Q0BTG0|RECO_GRABC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|114315832|gb|ABI61892.1| DNA repair protein recO [Granulibacter bethesdensis CGDNIH1] Length = 250 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 71/239 (29%), Positives = 114/239 (47%), Gaps = 3/239 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W I+L + YGE + + V + G + G VR G S + I Q GNLV W + Sbjct: 1 MEWTAPCIVLSAQPYGEADCLAAVFSEDQGLYRGLVRGGTSRQRGGIWQPGNLVMARWTA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 RLA LG E++ A + L L L+S+ + LP+RE + L L Sbjct: 61 RLADQLGSLTAELIHPAAALAMDDPLNLAVLRSLCTVAEGALPDREAHPAAFIPLPGLLT 120 Query: 120 CH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + ++ E +LL+ +G+GLDL +C VTG L +VSP++G AV P Sbjct: 121 RLSLGGGQVVEDAIRWEAILLRELGYGLDLQRCAVTGQVSGLHYVSPRTGRAVSSDAAEP 180 Query: 179 YAEKMLVLPSFLWKEEQT-IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 + +++L LP+FL + +T D + + +LT YFL++ R + ++ Sbjct: 181 WLDRLLPLPAFLLHQAETDSDPVAWRDGLRLTGYFLSRDVFGTRHRPLPPARMSLYDRI 239 >gi|254502661|ref|ZP_05114812.1| DNA repair protein RecO [Labrenzia alexandrii DFL-11] gi|222438732|gb|EEE45411.1| DNA repair protein RecO [Labrenzia alexandrii DFL-11] Length = 244 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 91/234 (38%), Positives = 129/234 (55%), Gaps = 5/234 (2%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGE 68 +L R +GE ++ILEVMT GRHLG VR G+S R +P LQ GN + + W++RL+ +LG+ Sbjct: 2 VLTTRKHGENDVILEVMTADSGRHLGLVRGGRSKRHRPALQPGNELSLTWKARLSDHLGQ 61 Query: 69 FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIG 128 F+ E + A L++S + L +Q + L R LPER P +Y LN+ L+ Sbjct: 62 FQIEPHTARAADLMNSGIGLAAVQHLAALVRLLPERHPYPRIYGALNVVLDHLDASDAAA 121 Query: 129 KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPS 188 + ++ EL LL+ +G GLDLT C TG T DL +VSP+S AV R G PY +K+L LPS Sbjct: 122 ALMIRFELELLQELGAGLDLTSCAATGTTDDLAYVSPRSARAVSREAGRPYHDKLLPLPS 181 Query: 189 FLWKE----EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 FL + + FQLT +FL++ L I R L + Sbjct: 182 FLLDGQRQAGTELTWQDVTQGFQLTGFFLDRQ-LGERNITDSGTRTLLTNALEK 234 >gi|83593184|ref|YP_426936.1| DNA repair protein RecO [Rhodospirillum rubrum ATCC 11170] gi|119361481|sp|Q2RT96|RECO_RHORT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|83576098|gb|ABC22649.1| Recombination protein O, RecO [Rhodospirillum rubrum ATCC 11170] Length = 252 Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 77/246 (31%), Positives = 118/246 (47%), Gaps = 8/246 (3%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M W D I+L R +GE +I+ +++ +GRH G VR G+ R++ LQ G+LV+ W+ Sbjct: 1 MIEWSDRGIVLAARPHGEDGVIVSLLSAGHGRHSGIVRGGRGKRLRAALQPGSLVQATWK 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 +RL +LG E+L LL L L + L + + L Sbjct: 61 ARLEDHLGSLVVELLAGVAGGLLDDRDRLAALAAACALAETVLPERAPQADVYDATLALL 120 Query: 120 C------HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 P V FV+ E+ LL +GFGLDL+ C V+G DL +VSP+SG AV R Sbjct: 121 DALAEGGEGTPLVWAGAFVRWEIGLLAALGFGLDLSCCAVSGECGDLAYVSPRSGRAVGR 180 Query: 174 SVGLPYAEKMLVLPSFLWKEEQ-TIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENF 232 G P+ ++L LP+FL + +A ++ +L+ YFL + L R+ F Sbjct: 181 EAGAPWQARLLALPAFLLSPAEVPANAQAVGDGLRLSGYFLEGHVLAPQGRGLPASRQRF 240 Query: 233 LGKLLE 238 + +L Sbjct: 241 VERLRR 246 >gi|319404020|emb|CBI77608.1| DNA repair protein RecO [Bartonella rochalimae ATCC BAA-1498] Length = 248 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 101/239 (42%), Positives = 149/239 (62%), Gaps = 1/239 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ AIILG R +GE ++ILE+MTRQ+GR++G V+ G+S RM P+LQ GN V W + Sbjct: 1 MKWKEQAIILGTRQHGETSVILEIMTRQHGRYMGIVKGGRSRRMAPLLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG FR E L H ++L+ LY LQ + R LPER+P LYDML F+ Sbjct: 61 RLDEHLGLFRLEALNLHASRLIVLPEALYSLQLMAFYLRLLPERDPHPVLYDMLYFFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P + ++ V+ EL+LL+ +GFGLDL+ C VTG + L +VSPKSG AVC +G P+ Sbjct: 121 FEDPFINAELLVRFELLLLEELGFGLDLSCCAVTGRQEKLYYVSPKSGRAVCEEIGRPWK 180 Query: 181 EKMLVLPSFLWKEEQ-TIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +K+L+LP FL ++ +D + + LT++FL +Y + I LR + + Sbjct: 181 DKLLLLPQFLVQKSVYPVDFNDISKGLILTNFFLTRYVWEARGIKQLSLRVSLIQLFER 239 >gi|319407033|emb|CBI80670.1| DNA repair protein RecO [Bartonella sp. 1-1C] Length = 248 Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats. Identities = 101/239 (42%), Positives = 149/239 (62%), Gaps = 1/239 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ AIILG R +GE ++ILE+MTRQ+GR++G V+ G+S RM P+LQ GN V W + Sbjct: 1 MKWKEQAIILGTRQHGETSVILEIMTRQHGRYMGIVKGGRSRRMAPLLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG FR E L+ H ++L+ LY LQ + R LPER+P LYDML F+ Sbjct: 61 RLDEHLGLFRLEALDLHASRLIVLPEALYSLQLMAFYLRLLPERDPHPVLYDMLYFFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + P + ++ V+ EL+LL+ +GFGLDL+ C VTG + L +VSPKSG AVC +G P+ Sbjct: 121 FEDPFINAELLVRFELLLLEELGFGLDLSCCAVTGRQEKLYYVSPKSGRAVCEEIGRPWK 180 Query: 181 EKMLVLPSFLWKEEQ-TIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +K+L+LP FL ++ +D + + LT++FL +Y I LR + + Sbjct: 181 DKLLLLPKFLVQKNVYPVDFNDISKGLILTNFFLTRYVWDARGIKQSSLRVSLIQLFER 239 >gi|304321235|ref|YP_003854878.1| DNA repair protein RecO [Parvularcula bermudensis HTCC2503] gi|303300137|gb|ADM09736.1| DNA repair protein RecO [Parvularcula bermudensis HTCC2503] Length = 243 Score = 158 bits (398), Expect = 9e-37, Method: Composition-based stats. Identities = 82/242 (33%), Positives = 120/242 (49%), Gaps = 6/242 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 W D ++ GE ++++ + TR G G V GQ R P+LQ GNLV +W SR Sbjct: 3 EWTDRGFVIKTIPRGENHLVVTLFTRCRGAVTGLVHGGQGTRKAPLLQRGNLVSADWSSR 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLNC 120 A G +R E+ E+ A+ L S L L LQS+ L LPE L+D +F + Sbjct: 63 QADGYGTYRLELAEAIAARALDSRLSLLALQSVTDLLCEILPEGVAYEGLFDATEVFFSA 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT----QDLLWVSPKSGGAVCRSVG 176 +++ + V+ EL LL +G+GL L +C TG T DL++VSPKSGGAV G Sbjct: 123 LGEKAIMATLLVKWELGLLAALGYGLSLERCAATGRTLEDGADLVFVSPKSGGAVTAEAG 182 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 PYA+++L LP FL + + + +LT FL++ L R + +L Sbjct: 183 APYADRLLPLPPFLIDRGEP-TWPDIAAGLRLTGTFLDERLLAPVGKSLPEARGQLIRRL 241 Query: 237 LE 238 Sbjct: 242 TR 243 >gi|94498593|ref|ZP_01305147.1| Recombinational DNA repair protein (RecF pathway)-like [Sphingomonas sp. SKA58] gi|94421957|gb|EAT07004.1| Recombinational DNA repair protein (RecF pathway)-like [Sphingomonas sp. SKA58] Length = 244 Score = 154 bits (389), Expect = 9e-36, Method: Composition-based stats. Identities = 71/237 (29%), Positives = 109/237 (45%), Gaps = 4/237 (1%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 AI+ VR++GE I ++T +G G+VR G+S M+P+L GN+V+ ++R+R L Sbjct: 8 AIVCAVRAHGEHGAIARLLTPDHGLMAGYVRGGRSRAMRPVLLPGNVVKADFRARTEDQL 67 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS- 125 E+ S L S LPE P LY L L+ + Sbjct: 68 AGLAVELAHSRAPLLAEPLPAAAIDWSCALTAAALPEATPYPALYQALAGLLDAVEAAPA 127 Query: 126 --VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 V+ EL+LL +GFGLDL++C G DL +VSP+S AV R+ L Y +++ Sbjct: 128 ARGWAVALVRYELLLLTELGFGLDLSRCAALGDVNDLAFVSPRSAAAVSRAGALGYEQRL 187 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 L LP FL D + +LT +FL + + R+ + +L + Sbjct: 188 LPLPPFLVGGG-AGDWADIMDGLRLTGFFLERSVMTERRTDVLAARDRLVERLKRAV 243 >gi|148557387|ref|YP_001264969.1| DNA repair protein RecO [Sphingomonas wittichii RW1] gi|254790737|sp|A5VEW5|RECO_SPHWW RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|148502577|gb|ABQ70831.1| DNA repair protein RecO [Sphingomonas wittichii RW1] Length = 243 Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 78/242 (32%), Positives = 117/242 (48%), Gaps = 3/242 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + AII +R++GE I+ +T +G G+VR G+S R++P+L AGNLV +R+ Sbjct: 1 MQVRTPAIICAMRAHGEHGAIVRALTPDHGLLAGYVRGGRSRRLRPVLVAGNLVEAEFRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R A+ L E+ S L L E +P LY+ L+ L Sbjct: 61 RTAEQLPGLTVELSHSRAGLLAEPLAAAAIDWLSSLTAASLAEGQPHARLYEALDAVLAA 120 Query: 121 HKIPSV---IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + V+ ELML+ ++G+ LDL+ C TG DL +VSPKSGGAV R+ G Sbjct: 121 IEYAPSARGWAAAAVRYELMLMADLGYALDLSACAATGARDDLAYVSPKSGGAVSRAAGE 180 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 PYA ++L LP+FL D + +LT +FL + L R+ + ++ Sbjct: 181 PYAARLLPLPAFLVDPSADSDWSDIVDGMRLTGHFLARDILVDRRADALDARQRLVDRIG 240 Query: 238 EL 239 L Sbjct: 241 RL 242 >gi|71083742|ref|YP_266462.1| recombination protein O [Candidatus Pelagibacter ubique HTCC1062] gi|91763222|ref|ZP_01265186.1| Recombination protein O [Candidatus Pelagibacter ubique HTCC1002] gi|71062855|gb|AAZ21858.1| Recombination protein O [Candidatus Pelagibacter ubique HTCC1062] gi|91717635|gb|EAS84286.1| Recombination protein O [Candidatus Pelagibacter ubique HTCC1002] Length = 226 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 89/237 (37%), Gaps = 11/237 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D A ++ Y E +II EV T +G+ G + G S +++ LQ GN + VN+ S Sbjct: 1 MNWDDSAYLVSKNRYSENSIIAEVFTENHGKISGIIFGGTSKKIKNYLQIGNKIYVNYNS 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + +G F+ E+L++ + L + S + L + L + L Sbjct: 61 KSVTRIGYFKIEILKALTPLYFDQNQKLSCITSAMHLIKLLTAEAQSNKEIFKLIDKFFE 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + ++ EL LLK +G+ L+L + + KS Sbjct: 121 ILNSENWIQKYIFWELELLKLLGYDLELKTMAEKEIVDSEVNYYVKSSTEKKSIPNFLID 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 E + + + + +L K L+ N ++ R +F+ L Sbjct: 181 ENNMDVNLKNLLKGLKL-----------VSDYLEKSILKPNNLNLPTSRTHFINLLK 226 >gi|119385562|ref|YP_916617.1| DNA repair protein RecO [Paracoccus denitrificans PD1222] gi|254764650|sp|A1B5X7|RECO_PARDP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119376157|gb|ABL70921.1| DNA repair protein RecO [Paracoccus denitrificans PD1222] Length = 242 Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 72/237 (30%), Positives = 109/237 (45%), Gaps = 5/237 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W +A ++ ++ +GE +IL V++R+ G G V G S + +LQ GN V + WR+ Sbjct: 1 MEWSGEASVMALQRHGESAVILTVLSRETGLIRGLVPGGASAKRAAMLQPGNRVSLRWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL + LG F E + L S L LPER+P L D L+ Sbjct: 61 RLEEQLGTFAVEPARARPGLLGSGDALAGVNAVTALLTFALPERDPHPRLADATEALLDL 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + ++ E+ LL +GFGLDLT C VTG + L +VSP+SG AV +A Sbjct: 121 MDAGEGWAEAYLHWEMRLLDELGFGLDLTSCAVTGAREGLAYVSPRSGRAVSAQAAGEWA 180 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN-IIHCHLLRENFLGKL 236 ++L LP+ L ++ A LT +FL + + R + +L Sbjct: 181 PRLLPLPAMLGGRGNGG----IEDALALTGHFLQVRLAEAHAGKPLPPARARLVARL 233 >gi|294012225|ref|YP_003545685.1| DNA repair protein RecO [Sphingobium japonicum UT26S] gi|292675555|dbj|BAI97073.1| DNA repair protein RecO [Sphingobium japonicum UT26S] Length = 244 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 67/239 (28%), Positives = 110/239 (46%), Gaps = 4/239 (1%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQ 64 A++ +R +GE I ++T +G G+VR G+S R++P+L GN V+ +R+R + Sbjct: 6 TPALVCALRPHGEHGAIARLLTPGHGLLAGYVRGGRSRRLRPVLLPGNAVKAEFRARTEE 65 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 L E+ S L + LPE P L+ L+ L + Sbjct: 66 QLAGLTVELEHSRAPLLAEPLPAAAIDWACALTAVALPEATPYPALHQALDGVLGAVEAA 125 Query: 125 S---VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 ++ EL+LL +GFGLDL +C TG DL +VSP+S AV R+ + Y + Sbjct: 126 PAARGWATALIRYELLLLAELGFGLDLGRCAATGGNDDLAYVSPRSAAAVSRAGAVGYED 185 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 ++L LP+FL + + +LT +FL + L + RE + +L + Sbjct: 186 RLLPLPAFLLEGGAGEWPA-ILDGLRLTGFFLERSVLTDWRVDVLAARERLVDRLKRAV 243 >gi|258543012|ref|YP_003188445.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-01] gi|256634090|dbj|BAI00066.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-01] gi|256637150|dbj|BAI03119.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-03] gi|256640202|dbj|BAI06164.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-07] gi|256643259|dbj|BAI09214.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-22] gi|256646314|dbj|BAI12262.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-26] gi|256649367|dbj|BAI15308.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-32] gi|256652353|dbj|BAI18287.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655411|dbj|BAI21338.1| DNA repair protein RecO [Acetobacter pasteurianus IFO 3283-12] Length = 263 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 72/240 (30%), Positives = 113/240 (47%), Gaps = 6/240 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + A++L GE + + V+T YG G G S + + Q GN+V+ + R A Sbjct: 12 EAPALVLFAGVQGETSARVHVLTEDYGPLRGIAYGGASKAGRALWQPGNVVKTSLHKRSA 71 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER-EPCLELYDMLNIFLNCHK 122 + E+L + A+LL + L L +QS+ L +PC L+ L Sbjct: 72 AAPLQISAELLYACAARLLDAPLALSMVQSVCVLADVTLPEADPCPFLFAETVRLLTFLG 131 Query: 123 IPSVI-----GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 VI V+ E+ LL +GFGLDL+ C VTG T++L +VSP++G AV Sbjct: 132 YDPVIAEREGMPHVVRWEMALLATLGFGLDLSACAVTGSTENLHYVSPRTGRAVSEEGAG 191 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 + +++L LPSFL EQT +A + +LT +FL + A + R+ +L Sbjct: 192 EWKDRLLPLPSFLQDTEQTGNAADWLAGLRLTGHFLARDAFGQRHLPLPAARQRLYDRLE 251 >gi|296535950|ref|ZP_06898099.1| recombination protein O [Roseomonas cervicalis ATCC 49957] gi|296263723|gb|EFH10199.1| recombination protein O [Roseomonas cervicalis ATCC 49957] Length = 250 Score = 148 bits (373), Expect = 7e-34, Method: Composition-based stats. Identities = 81/238 (34%), Positives = 116/238 (48%), Gaps = 2/238 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQ AI+L R +GE ++ V+T +GRH G V G S + Q GNLV V WR Sbjct: 1 MEWQAPAIVLEARPHGEGAAVVSVLTEDHGRHAGLVHGGASRAQSGLWQPGNLVEVRWRG 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLN 119 RLA+ LG E++ A L L L LQS L LPERE ++ L + Sbjct: 61 RLAEQLGSLSGEMVHPTAALALDEPLTLALLQSACALATDALPEREAQPRIFSGLLALMA 120 Query: 120 CHKIPSVIG-KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + +++ E +LL+ +G+GLDL+ C VTG ++L VSP+SG AV P Sbjct: 121 QLGRGAPALLADYIRWEALLLEGLGYGLDLSVCAVTGAAENLTHVSPRSGRAVSAEAAAP 180 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 Y +++L LP FL + D +LT +FL + A RE + ++ Sbjct: 181 YRDRLLPLPLFLLGGQDERDPAEWLKGLRLTGHFLERDAFGARHRAVPPARERLVSRI 238 >gi|307294438|ref|ZP_07574282.1| DNA repair protein RecO [Sphingobium chlorophenolicum L-1] gi|306880589|gb|EFN11806.1| DNA repair protein RecO [Sphingobium chlorophenolicum L-1] Length = 244 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 68/239 (28%), Positives = 111/239 (46%), Gaps = 4/239 (1%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQ 64 A++ +R +GE I ++T +G G+VR G+S RM+P+L N V+ +R+R + Sbjct: 6 TPALVCALRPHGEHGAIARLLTPDHGLLAGYVRGGRSRRMRPVLLPANAVKAEFRARTEE 65 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL---NCH 121 L E+ S L + LPE P LY L+ L Sbjct: 66 QLAGLTVELDHSRAPLLAEPLPAAAIDWACALTAVALPEGTPYPALYQALDGVLGAVEAA 125 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 ++ EL++L +GFGLDLT+C TG DL ++SP+S AV R+ Y + Sbjct: 126 PAARGWAAALIRYELLMLAELGFGLDLTRCAATGGRDDLAYISPRSAAAVSRAGAAGYED 185 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 ++L LP+FL + D ++ +LT +FL + L + RE + +L ++ Sbjct: 186 RLLPLPAFLLEGG-AGDWPAILDGLRLTGFFLERSVLTDWRVDVLAARERLVDRLKRVV 243 >gi|329115619|ref|ZP_08244341.1| DNA repair protein RecO [Acetobacter pomorum DM001] gi|326695047|gb|EGE46766.1| DNA repair protein RecO [Acetobacter pomorum DM001] Length = 263 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 71/240 (29%), Positives = 113/240 (47%), Gaps = 6/240 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + A++L GE + + V+T YG G G S + + Q GN+V+ ++ R A Sbjct: 12 EAPALVLFAGVQGETSARIHVLTEDYGPLRGIAYGGASKAGRALWQPGNVVKTSFHKRSA 71 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER-EPCLELYDMLNIFLNCHK 122 + E+L + A+LL + L L +QS+ L +PC L+ L Sbjct: 72 AAPLQISGELLYACAARLLDAPLALGMVQSVCVLADVTLPEADPCPFLFAETVRLLTFLG 131 Query: 123 IPSVI-----GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 V+ V+ E+ LL +GFGLDL+ C VTG T++L +VSP++G AV Sbjct: 132 YDPVVAEREGMPHVVRWEMALLVTLGFGLDLSACAVTGSTENLHYVSPRTGRAVSEEGAG 191 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 + +++L LPSFL EQT A + +LT +FL + A + R+ +L Sbjct: 192 EWKDRLLPLPSFLRDTEQTGHAADWLAGLRLTGHFLARDAFGQRHLPLPAARQRLYDRLE 251 >gi|319898694|ref|YP_004158787.1| DNA repair protein RecO [Bartonella clarridgeiae 73] gi|319402658|emb|CBI76204.1| DNA repair protein RecO [Bartonella clarridgeiae 73] Length = 231 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 99/220 (45%), Positives = 140/220 (63%), Gaps = 1/220 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ AIILG R +GE ++ILE+MTRQ GR++G V+ G+S RM +LQ GN V W + Sbjct: 1 MKWKEQAIILGTRQHGETSVILEIMTRQRGRYMGIVKGGRSRRMAFLLQPGNFVEAEWWA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG FR E L+ H ++L+ LY Q + R LPER+P LYDML F+ Sbjct: 61 RLDEHLGLFRLEALDLHASRLIVLPEALYSFQLMASHLRLLPERDPHPVLYDMLYFFMQN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P + ++ V+ EL+LL+ +GFGLDL+ C VTG + L +VSPKSG AVC VG P+ Sbjct: 121 FDDPFINAELLVRFELLLLEELGFGLDLSCCAVTGRQEKLCYVSPKSGRAVCEEVGRPWK 180 Query: 181 EKMLVLPSFLWKEEQ-TIDADSLKSAFQLTDYFLNKYALQ 219 +K+L LP FL ++ +D + +K LTD+F N L+ Sbjct: 181 DKLLFLPQFLARKTICPVDFNDIKKGLILTDFFFNTLCLE 220 >gi|310815097|ref|YP_003963061.1| DNA repair protein RecO [Ketogulonicigenium vulgare Y25] gi|308753832|gb|ADO41761.1| DNA repair protein RecO [Ketogulonicigenium vulgare Y25] Length = 241 Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats. Identities = 76/222 (34%), Positives = 112/222 (50%), Gaps = 6/222 (2%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M WQD+ I+L +GE +I +V T++ G+ G VR G RMQP+L GN + + WR Sbjct: 1 MIDWQDEGILLTTHRHGEAGVIAQVFTQERGKISGLVRGGAGSRMQPVLIPGNQLSLRWR 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLNIFL 118 +RL +LG + E++ S L+ L L ++ L P Y L Sbjct: 61 ARLDDHLGSLQPELIRSRAGFLMQDRLSLAAGAAVTALLAATMPERVPHTAFYAQSTALL 120 Query: 119 NC---HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + S+ ++Q E++LL+ GFGLDLT C VTG DL +VSPKSG AV +S Sbjct: 121 DLVGVEDWQSLWPLAYLQWEMVLLREGGFGLDLTTCAVTGAADDLCYVSPKSGRAVSKSG 180 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYA 217 +AE++L LP+ + E D + A T++FL Sbjct: 181 AGAWAERLLPLPAVMRGEGDA-DTSDILQALATTEWFLLHRL 221 >gi|157825871|ref|YP_001493591.1| DNA repair protein RecO [Rickettsia akari str. Hartford] gi|254764658|sp|A8GNV8|RECO_RICAH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|157799829|gb|ABV75083.1| DNA repair protein RecO [Rickettsia akari str. Hartford] Length = 237 Score = 138 bits (347), Expect = 7e-31, Method: Composition-based stats. Identities = 75/238 (31%), Positives = 124/238 (52%), Gaps = 3/238 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G V+ S + + I Q GN+V W++ Sbjct: 1 MNIKDVGVIISKKPLKENTFIITVCTKNHGLYSGVVK-ESSKKSKFIYQEGNIVDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G + E+++S+ L+ + LY SI+ L + L + + Sbjct: 60 RLHEHIGIAKCELIKSYTGYLIINKTKLYAFNSIISLIKELCHEREKHSNFFSFLLNYLD 119 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + + ++ EL LL G+ LDLTKC VT VT DL +VSPKS A+ VG PY Sbjct: 120 NLSKNFCFRDYINFELTLLAKTGYKLDLTKCGVTHVTTDLTYVSPKSARALSYEVGKPYK 179 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +K+L+LP FL ++ I + + A LT+YF N+Y +N R+ F+G +L Sbjct: 180 DKLLILPKFLLSDDSEITLEEKRQALTLTNYFFNRYLFHNN--RQPEARQTFVGYILN 235 >gi|157964679|ref|YP_001499503.1| DNA repair protein RecO [Rickettsia massiliae MTU5] gi|157844455|gb|ABV84956.1| DNA repair protein RecO [Rickettsia massiliae MTU5] Length = 274 Score = 138 bits (346), Expect = 9e-31, Method: Composition-based stats. Identities = 72/238 (30%), Positives = 121/238 (50%), Gaps = 3/238 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G V+ S + + Q GN+V W++ Sbjct: 38 MNIKDIGVIIAKKPLKENTFIITVFTKNHGLYSGVVK-EFSRKSKFTYQEGNIVDFLWQA 96 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LG + E+++S+ +++ LY S++ L + L + I Sbjct: 97 RLHEHLGMAKCELIKSYTGYFITNKAKLYAFNSVISLIKELFHEREEHSKFCSFLINYLD 156 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + + ++ EL LL G+ LDLTKC V+ VT DL++VSPKS A+ VG PY Sbjct: 157 NLSKNFCFRDYINFELALLAETGYKLDLTKCGVSHVTTDLIYVSPKSARALSYEVGKPYK 216 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +K+L+LP FL + I + + A LT+YF N+Y +N R+ F+ L Sbjct: 217 DKLLMLPRFLLSDNIEITLEEKRQALALTNYFFNRYLFHNN--RQVEARQTFIEYTLN 272 >gi|157803626|ref|YP_001492175.1| DNA repair protein RecO [Rickettsia canadensis str. McKiel] gi|254790734|sp|A8EYF7|RECO_RICCK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|157784889|gb|ABV73390.1| DNA repair protein RecO [Rickettsia canadensis str. McKiel] Length = 241 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 74/237 (31%), Positives = 121/237 (51%), Gaps = 3/237 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ YG + G V+ S + + I Q GN+V W + Sbjct: 1 MNIKDIGVIVAKKPLKENTFIITVFTKNYGLYSGVVK-ASSKKSKFIYQEGNIVDFLWMA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G + E+++S+ +++ LY SI+ L + L + I Sbjct: 60 RLHEHIGIAKCELIKSYTGYFITNKTKLYAFNSIISLIKELLHEREEYSNFFSFLINYLD 119 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + ++ EL LL G+ LDL+KC V+ V QDL +VSPKSG A+ VG PY Sbjct: 120 NLSKKFFFRDYINFELALLDIAGYKLDLSKCAVSNVKQDLYYVSPKSGRALSYEVGKPYK 179 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 +K+L+LP FL + I + + A LT+YF N+Y +N R+ F+ +L Sbjct: 180 DKLLILPKFLLSDNSKITLEEKRQALTLTNYFFNRYLFHNN--RHAEARQAFMEYIL 234 >gi|91205107|ref|YP_537462.1| DNA repair protein RecO [Rickettsia bellii RML369-C] gi|157827560|ref|YP_001496624.1| DNA repair protein RecO [Rickettsia bellii OSU 85-389] gi|122425954|sp|Q1RJU1|RECO_RICBR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254790733|sp|A8GXI7|RECO_RICB8 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|91068651|gb|ABE04373.1| DNA repair protein RecO [Rickettsia bellii RML369-C] gi|157802864|gb|ABV79587.1| DNA repair protein RecO [Rickettsia bellii OSU 85-389] Length = 241 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 72/238 (30%), Positives = 119/238 (50%), Gaps = 3/238 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G + S + + I Q GN+V W++ Sbjct: 1 MNIKDIGVIIAKKPLKENTFIITVFTKNHGLYSGVAK-ESSKKSKFIYQEGNVVDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G + E+++S+ + + LY S++ L + L + L I Sbjct: 60 RLHEHIGIAKCELVKSYIGHFIINKAKLYAFNSVISLIKELFHEREEHYNFFSLLINYLD 119 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + ++ EL LL +G+ LD TKC V+ TQDL ++SPKSG AV VG PY Sbjct: 120 NLAKNFCFHDYINFELALLAEMGYELDFTKCGVSNTTQDLAYLSPKSGRAVSYEVGAPYK 179 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +K+L LP FL I + + A LT YF N+Y + +R+ F+ +LE Sbjct: 180 DKLLPLPKFLLSGNDKITLEEKRQALNLTSYFFNRYLF--HNHRQPEIRQVFVEYILE 235 >gi|51473730|ref|YP_067487.1| DNA repair protein RecO [Rickettsia typhi str. Wilmington] gi|81610783|sp|Q68WI7|RECO_RICTY RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|51460042|gb|AAU04005.1| possible RecO-like recombinational DNA repair protein [Rickettsia typhi str. Wilmington] Length = 236 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 71/239 (29%), Positives = 122/239 (51%), Gaps = 3/239 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G ++ S + + I Q GN+V W++ Sbjct: 1 MNIKDIGVIISKKPLKENTFIIRVFTKNHGLYSGVIK-ASSKKNKFIYQEGNIVDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G + E+++S+ + + LY S+ L + L ++ I Sbjct: 60 RLHEHIGIAKCELIKSYTGYFIINKAKLYAFNSVKFLIQELFHEREEHSIFFAFLINYLD 119 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + + ++ EL LL G+ +DLTKC V+ VT DL +VSPKS A+ VG PY Sbjct: 120 NLSKNFCFRDYINFELNLLAETGYKIDLTKCCVSHVTTDLTYVSPKSARALSYKVGKPYR 179 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +K+L+LP FL E+ I + K A LT+YF N+Y +N R+ F+ + + Sbjct: 180 DKLLILPKFLLSEDSKITLEEKKQALTLTNYFFNRYLFHNN--RQVEARKEFIEYITNI 236 >gi|157828681|ref|YP_001494923.1| DNA repair protein RecO [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933400|ref|YP_001650189.1| DNA repair protein RecO [Rickettsia rickettsii str. Iowa] gi|254790735|sp|B0BY57|RECO_RICRO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254790736|sp|A8GSP0|RECO_RICRS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|157801162|gb|ABV76415.1| DNA repair protein RecO [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908487|gb|ABY72783.1| DNA repair protein [Rickettsia rickettsii str. Iowa] Length = 237 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 71/238 (29%), Positives = 121/238 (50%), Gaps = 3/238 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G V+ S + + I Q GN++ W++ Sbjct: 1 MNIKDIGVIIAKKPLKENTFIITVFTKNHGLYSGVVK-EFSKKSKFIYQEGNIIDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G + E+++S+ +++ LY S++ L + L + I Sbjct: 60 RLHEHIGMAKCELIKSYTGYFITNKTKLYAFNSVISLIKELFHEREEHSKFFSFLINYLD 119 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + ++ EL LL G+ LDLTKC V+ VT DL++VSPKS A+ VG PY Sbjct: 120 NLSKHFCFRDYINFELALLAETGYKLDLTKCGVSHVTTDLIYVSPKSARALSYEVGKPYK 179 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +K+L+LP FL + I + + A LT+YF N+Y +N R+ F+ L Sbjct: 180 DKLLMLPRFLLSDNSEITLEEKRQALALTNYFFNRYLFHNN--RQVEARQTFIEYTLN 235 >gi|15892735|ref|NP_360449.1| DNA repair protein RecO [Rickettsia conorii str. Malish 7] gi|34581542|ref|ZP_00143022.1| hypothetical protein [Rickettsia sibirica 246] gi|81595557|sp|Q92HF9|RECO_RICCN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|15619911|gb|AAL03350.1| unknown [Rickettsia conorii str. Malish 7] gi|28262927|gb|EAA26431.1| unknown [Rickettsia sibirica 246] Length = 237 Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats. Identities = 71/238 (29%), Positives = 122/238 (51%), Gaps = 3/238 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G V+ S + + I Q GN++ W++ Sbjct: 1 MNIKDIGVIIAKKPLKENTFIITVFTKNHGLYSGVVK-EFSKKSKFIYQEGNIIDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G + E+++S+ +++ LY S++ L + L + I Sbjct: 60 RLHEHIGMAKCELIKSYTGYFITNKAKLYAFNSVISLIKELFHEREEHSKFFSFLINYLD 119 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + + ++ EL LL G+ LDLTKC V+ VT DL++VSPKS A+ VG PY Sbjct: 120 NLSKNFCFRDYINFELALLAETGYKLDLTKCGVSHVTTDLIYVSPKSARALSYEVGKPYK 179 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +K+L+LP FL + I + + A LT+YF N+Y +N R+ F+ L Sbjct: 180 DKLLMLPRFLLSDNSEITLEEKRQALALTNYFFNRYLFHNN--RQVEARQTFIEYTLN 235 >gi|239947680|ref|ZP_04699433.1| DNA repair protein RecO [Rickettsia endosymbiont of Ixodes scapularis] gi|239921956|gb|EER21980.1| DNA repair protein RecO [Rickettsia endosymbiont of Ixodes scapularis] Length = 234 Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats. Identities = 75/237 (31%), Positives = 122/237 (51%), Gaps = 3/237 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G V+ S + + I Q GN+V W++ Sbjct: 1 MNIKDIGVIIAKKPLKENTFIITVFTKNHGLYSGVVK-ESSKKSKFIYQEGNIVDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G + E+++S+ + + LY S++ L + L + I Sbjct: 60 RLHEHIGMAKCELIKSYTGYFIINKAKLYAFNSVISLIKELFHEREEHSNFFSFLINYLD 119 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + + ++ EL LL G+ LDLTKC V+ VT DL +VSPKSG A+ VG PY Sbjct: 120 NLSKNFCFRDYINFELALLAETGYKLDLTKCDVSHVTTDLTYVSPKSGRALSYKVGKPYK 179 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 +K+L+LP FL E I + K A LT+YF N+Y +N R+ F+ +L Sbjct: 180 DKLLILPRFLLSENSEITLEEKKQAITLTNYFFNRYLFHNN--RQAEARQAFMEYIL 234 >gi|148284965|ref|YP_001249055.1| DNA repair protein RecO [Orientia tsutsugamushi str. Boryong] gi|254764648|sp|A5CF17|RECO_ORITB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|146740404|emb|CAM80867.1| DNA repair protein [Orientia tsutsugamushi str. Boryong] Length = 241 Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats. Identities = 81/239 (33%), Positives = 127/239 (53%), Gaps = 4/239 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M ++D AIIL R+ E I+ V+T+ YG + G +++ S + I Q GN+V W + Sbjct: 1 MNFRDKAIILKKRNIKENLAIVTVLTQSYGIYSGIIKDLHSKKNTIIYQIGNIVDFCWSA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSL-FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 RL ++LG E+++S+ ++S+ Y I ERE L++ L Sbjct: 61 RLDKHLGTINCELVKSYSYLIMSNKRNLFYTHSLIELTLMSFKERELHANLFEKWLGNLE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + ++ K ++ EL++LK G+ L L +C VT TQ+L++VSPKSG A+ +VG PY Sbjct: 121 SINVGNINIKNYINFELLILKEAGYQLTLDRCGVTNCTQNLIYVSPKSGQAISAAVGEPY 180 Query: 180 AEKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 K+L+LP FL + D +++AF LT YF NKY L + RE L +L Sbjct: 181 KHKLLLLPKFLVHNNCEPEDIYEIQAAFNLTAYFFNKYVLI--KKKLPIARELLLKSIL 237 >gi|15604714|ref|NP_220921.1| DNA repair protein RecO [Rickettsia prowazekii str. Madrid E] gi|292572163|gb|ADE30078.1| DNA repair protein RecO [Rickettsia prowazekii Rp22] Length = 236 Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats. Identities = 72/239 (30%), Positives = 123/239 (51%), Gaps = 3/239 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G ++ S + + I Q GN+V W++ Sbjct: 1 MNIKDIGVIISKKPLKENTFIIRVFTKNHGLYSGVIK-ESSKKNKFIYQEGNIVDFLWKA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G + E+++S+ + + LY S++ L + L ++ I Sbjct: 60 RLHEHIGIAKCELIKSYTGYFIINKAKLYAFNSVISLIQELFHEREEHSIFFSFLINYLD 119 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + + ++ EL LL G+ LDLTKC V+ VT DL +VSPKS A+ VG PY Sbjct: 120 NLSKNFCFRDYISFELNLLAETGYKLDLTKCCVSHVTTDLTYVSPKSARALSYKVGKPYR 179 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 +K+L+LP FL ++ I + K A LT+YF N+Y +N RE F+ + + Sbjct: 180 DKLLILPKFLLAKDSEITLEEKKQALTLTNYFFNRYLFHNN--RQVKAREEFIEYITNI 236 >gi|189184083|ref|YP_001937868.1| DNA repair protein RecO [Orientia tsutsugamushi str. Ikeda] gi|254764649|sp|B3CTD7|RECO_ORITI RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|189180854|dbj|BAG40634.1| DNA repair protein RecO [Orientia tsutsugamushi str. Ikeda] Length = 241 Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats. Identities = 83/240 (34%), Positives = 129/240 (53%), Gaps = 4/240 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M ++D AIIL R+ E I+ V+T+ YG + G +++ S + I Q GN+V W + Sbjct: 1 MNFRDKAIILKKRNIKENLAIVTVLTQSYGIYSGIIKDLHSKKNTIIYQIGNIVDFCWSA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSL-FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 RL ++LG E+++S+ ++S+ LY I ERE L++ L Sbjct: 61 RLDEHLGTINCELVKSYSYLIMSNKRNLLYTHSLIELTLMSFKERELHANLFEKWLENLE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 ++ K ++ EL++LK G+ L+L +C VT TQ+L++VSPKSG A+ +VG PY Sbjct: 121 SINTGNINVKNYINFELLILKEAGYRLNLDRCGVTNCTQNLIYVSPKSGQAISATVGEPY 180 Query: 180 AEKMLVLPSFLWKEE-QTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 K+L+LP FL + D +++AF LT YF NKY L + RE L +LE Sbjct: 181 KHKLLLLPKFLVHNNCEPEDIYEIQAAFNLTAYFFNKYILI--KKKLPITRELLLKSILE 238 >gi|238650314|ref|YP_002916166.1| DNA repair protein RecO [Rickettsia peacockii str. Rustic] gi|259563684|sp|C4K0L7|RECO_RICPU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238624412|gb|ACR47118.1| DNA repair protein RecO [Rickettsia peacockii str. Rustic] Length = 237 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 71/238 (29%), Positives = 123/238 (51%), Gaps = 3/238 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G V+ S + + I Q GN++ W++ Sbjct: 1 MNIKDIGVIIAKKPLKENTFIITVFTKNHGLYSGVVK-EFSKKSKFIYQEGNIIDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G + E+++S+ +++ LY S++ L + L + + I Sbjct: 60 RLHEHIGMAKCELIKSYTGYFITNKAKLYAFNSVISLIKELFHEREEHSKFFLFLINYLD 119 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + + ++ EL LL G+ LDLTKC V+ VT DL++VSPKS A+ VG PY Sbjct: 120 NLSKNFCFRDYINFELALLAETGYKLDLTKCGVSHVTTDLIYVSPKSARALSYEVGKPYK 179 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +K+L+LP FL + I + + A LT+YF N+Y +N R+ F+ L Sbjct: 180 DKLLMLPRFLLSDNSEITLEEKRQALALTNYFFNRYLFHNN--RQVEARQTFIEYTLN 235 >gi|67459260|ref|YP_246884.1| DNA repair protein RecO [Rickettsia felis URRWXCal2] gi|75536308|sp|Q4UL54|RECO_RICFE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|67004793|gb|AAY61719.1| DNA repair protein RecO [Rickettsia felis URRWXCal2] Length = 237 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 73/238 (30%), Positives = 122/238 (51%), Gaps = 3/238 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G V+ S + + I Q GN+V W++ Sbjct: 1 MNIKDVGVIIAKKPLKENTFIITVFTKNHGLYSGVVK-ESSKKSKFIYQEGNIVDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G + E+++S+ + + LY S++ L + L + I Sbjct: 60 RLHEHIGMAKCELIKSYTGYFIINKAKLYAFNSVISLIKELFHEREEHSNFFSFLINYLD 119 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + + ++ EL LL G+ LDLTKC VT VT DL +VSPKS A+ VG PY Sbjct: 120 NLSKNFCFRDYINFELALLAETGYKLDLTKCGVTHVTTDLNYVSPKSARALSYEVGKPYK 179 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +K+L+LP FL ++ I + + A LT+YF N+Y +N R+ F+ +L Sbjct: 180 DKLLILPKFLLSDDSEITLEEKRQASTLTNYFFNRYLFHNN--RQAEARQIFMEYILN 235 >gi|301154943|emb|CBW14406.1| gap repair protein [Haemophilus parainfluenzae T3T1] Length = 234 Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 78/240 (32%), Gaps = 12/240 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNW 58 M Q +L R Y E ++++++ T + GR + ++ R + +LQ + + W Sbjct: 1 MDLQ-RGFVLHRRPYSETSLLVDLFTEETGRLTVIAKGARAKRSAWKSVLQPFTPLLLRW 59 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + A + L + G + R + +L+ L Sbjct: 60 SGKGALKTLTKAEPAAITLP---LQQTALYSGFYVNELITRVIEPETANPQLFQHYLQCL 116 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + E LLK +G+G+D C +G+ D + + Sbjct: 117 TGLATQPQVEPTLRLFEFHLLKILGYGIDFLHCAGSGLPVDESMTYQYRAEKGFIASLVK 176 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 + + D L++A + T + AL+ + RE F +L Sbjct: 177 DNLTFYGRDLLAFDRLEFTDEAVLQAAKRFT-----RIALKPYLGDKPLKSRELFTQNVL 231 >gi|325577292|ref|ZP_08147776.1| recombination protein O [Haemophilus parainfluenzae ATCC 33392] gi|325160874|gb|EGC72995.1| recombination protein O [Haemophilus parainfluenzae ATCC 33392] Length = 234 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 77/240 (32%), Gaps = 12/240 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNW 58 M Q +L R Y E ++++++ T + GR + ++ R + +LQ + + W Sbjct: 1 MDLQ-RGFVLHRRPYSETSLLVDLFTEETGRLTVIAKGARAKRSAWKSVLQPFTPLLLRW 59 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + A + L + G + R + +L+ L Sbjct: 60 SGKGALKTLTKAEPAAITLP---LQQTALYSGFYVNELITRVIEPETANPQLFQHYLQCL 116 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + E LLK +G+G+D C +G+ D + + Sbjct: 117 TGLATQPQVEPTLRLFEFHLLKILGYGIDFLHCAGSGLPVDESMTYQYRAEKGFIASLVK 176 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 + + D L +A + T + AL+ + RE F +L Sbjct: 177 DNLTFYGRDLLAFDRLEFTDESVLLAAKRFT-----RIALKPYLGDKPLKSRELFTQNVL 231 >gi|229586870|ref|YP_002845371.1| DNA repair protein RecO [Rickettsia africae ESF-5] gi|259563683|sp|C3PNW8|RECO_RICAE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|228021920|gb|ACP53628.1| DNA repair protein RecO [Rickettsia africae ESF-5] Length = 237 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 71/238 (29%), Positives = 124/238 (52%), Gaps = 3/238 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ ++ E I+ V T+ +G + G V+ S + + I Q GN++ W++ Sbjct: 1 MNIKDIGVIIAKKTLKENTFIITVFTKNHGLYSGVVK-EFSKKSKFIYQEGNIIDFLWQA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL +++G + E+++S+ +++ LY S++ L + L + I Sbjct: 60 RLHEHIGMAKCELIKSYTGYFITNKAKLYAFNSVISLIKELFHEREEHSKFFSFLINYLD 119 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + + ++ EL LL G+ LDLTKC V+ VT DL++VSPKS A+ +VG PY Sbjct: 120 NLSKNFCFRDYINFELALLAETGYKLDLTKCGVSHVTTDLIYVSPKSARALSYAVGKPYK 179 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 +K+L+LP FL + I + + A LT+YF N+Y +N R+ F+ L Sbjct: 180 DKLLMLPRFLLSDNSEITLEEKRQALALTNYFFNRYLFHNN--RQVEARQTFIEYTLN 235 >gi|218670194|ref|ZP_03519865.1| DNA repair protein RecO [Rhizobium etli GR56] Length = 190 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 86/181 (47%), Positives = 119/181 (65%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILGV+ +GE ++I EVMTR GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 1 MQWQDHAIILGVKRHGETSVIAEVMTRDRGRHLGLVRSGRSRAMQPVLQPGNAVEVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+L+ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 61 RLDEHLGEFRVEPVTLRAARLMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 P+ G++FV+ EL +L ++GFGLDL +C TG DL +VSPKS P+ Sbjct: 121 LHNPADAGELFVRFELAVLNDLGFGLDLAECAATGDRSDLAYVSPKSRPRRQPQRRAPWR 180 Query: 181 E 181 Sbjct: 181 T 181 >gi|68171672|ref|ZP_00545033.1| recO-related protein [Ehrlichia chaffeensis str. Sapulpa] gi|88658325|ref|YP_507349.1| DNA repair protein RecO [Ehrlichia chaffeensis str. Arkansas] gi|123493398|sp|Q2GGT4|RECO_EHRCR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|67998907|gb|EAM85598.1| recO-related protein [Ehrlichia chaffeensis str. Sapulpa] gi|88599782|gb|ABD45251.1| putative DNA repair protein RecO [Ehrlichia chaffeensis str. Arkansas] Length = 244 Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 66/242 (27%), Positives = 109/242 (45%), Gaps = 8/242 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD I++ +R YG+ II+ + T+++G G + S + LQ G+ V V W S Sbjct: 1 MRWQDQGIVIAIRKYGDDQIIISIFTQKHGLKKGLAKY--SKKATHRLQIGDYVNVTWSS 58 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL NLG F++E+++S + +L + + + + Sbjct: 59 RLISNLGCFKYELIKSTLYHYIQDNLKTMCIAFSTVILDQVLPENEENYIIYNCLDIFIN 118 Query: 121 HKIPSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 I +EL LL +GFGLDL++C V ++L ++SPK+G AV ++VGLP Sbjct: 119 SIQFQDINWKIKYLRLELTLLSELGFGLDLSRCAVNNTNENLTFISPKTGKAVSKTVGLP 178 Query: 179 YAEKMLVLPSFLWKEEQT----IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 Y++ +L LP L+ K + + YF K+ L RE + Sbjct: 179 YSKSLLPLPQLLYDVYNNYEYKYSKTDFKLSLNVLGYFFKKHFLTEKNTILIKYREEIIK 238 Query: 235 KL 236 + Sbjct: 239 LI 240 >gi|262273708|ref|ZP_06051521.1| DNA recombination and repair protein RecO [Grimontia hollisae CIP 101886] gi|262222123|gb|EEY73435.1| DNA recombination and repair protein RecO [Grimontia hollisae CIP 101886] Length = 237 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 77/242 (31%), Gaps = 12/242 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNW 58 M +L R Y E ++IL+V + +GR + + R + LQ + + W Sbjct: 1 MEGLQRCFVLHSRPYSETSLILDVFSENHGRVSLMAKGARGKRSPLKGALQPFTPLLMKW 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R A LS + G L R + +L+ L Sbjct: 61 SGRGE---MHTLRHAEAMGLAIPLSGNALFSGFYLNEILSRVVEPETAYHQLFYDYVTAL 117 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + EL LL ++G+G+D C +G D + + Sbjct: 118 TELAQHRNPEPALRRFELALLDSLGYGVDFLHCAGSGEPVDETMTYIFREQQGFVASLMK 177 Query: 179 YAEKMLVLPSF-LWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKL 236 M Q A+ LK+A + T + AL+ + RE FL + Sbjct: 178 SNTLMFTGSDLKALATRQFSTAEQLKAAKRFT-----RLALKPYLGPKPLKSRELFLLRT 232 Query: 237 LE 238 + Sbjct: 233 RK 234 >gi|229846418|ref|ZP_04466526.1| DNA repair protein RecO [Haemophilus influenzae 7P49H1] gi|229810511|gb|EEP46229.1| DNA repair protein RecO [Haemophilus influenzae 7P49H1] gi|309972510|gb|ADO95711.1| DNA repair protein RecO [Haemophilus influenzae R2846] Length = 236 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 36/235 (15%), Positives = 73/235 (31%), Gaps = 11/235 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + Sbjct: 7 RGFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKRSSWKSVLQPFTPLLLRWTGKST 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + L G L R + P L+ L Sbjct: 67 LKTLTKAEPAAITLP---LQQIALYSGFYVNELLTRVIESETPNPALFQHYLKCLTGLAT 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + + E LL+ +G+G+D C +G D + + Sbjct: 124 ETNVEPTLRLFEFQLLQILGYGVDFLHCAGSGEPVDFSMTYRYREEKGFVASLVKDNLTF 183 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 ++ D ++A + T + AL+ + RE F +L Sbjct: 184 YGRDLLAFEALDFSDDAVRQAAKRFT-----RIALKPYLGDKPLKSRELFTQNIL 233 >gi|148825386|ref|YP_001290139.1| DNA repair protein RecO [Haemophilus influenzae PittEE] gi|166221893|sp|A5UAF5|RECO_HAEIE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|148715546|gb|ABQ97756.1| DNA repair protein RecO [Haemophilus influenzae PittEE] Length = 236 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 36/235 (15%), Positives = 73/235 (31%), Gaps = 11/235 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + Sbjct: 7 RGFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKRSSWKSVLQPFTPLLLRWTGKST 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + L G L R + P L+ L Sbjct: 67 LKTLTKAEPAAITLP---LQQITLYSGFYVNELLTRVIESETPNPALFQHYLKCLTGLAT 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + + E LL+ +G+G+D C +G D + + Sbjct: 124 ETNVEPTLRLFEFQLLQILGYGVDFLHCAGSGEPVDFSMTYRYREEKGFVASLVKDNLTF 183 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 ++ D ++A + T + AL+ + RE F +L Sbjct: 184 YGRDLLAFEALDFSDDAVRQAAKRFT-----RIALKPYLGDKPLKSRELFTQNIL 233 >gi|260913269|ref|ZP_05919751.1| recombination protein O [Pasteurella dagmatis ATCC 43325] gi|260632856|gb|EEX51025.1| recombination protein O [Pasteurella dagmatis ATCC 43325] Length = 237 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 80/240 (33%), Gaps = 13/240 (5%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 WQ +L ++Y E ++++++ T + GR + ++ R + +LQ + + W Sbjct: 4 NWQ-RGFVLHRKAYSETSLLVDLFTEESGRLTVIAKGARAKRSSLKSVLQPFTPLLLRWT 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + A L + G L R L +L+ L Sbjct: 63 GKGELKTLTKAEP---AAIALPLQHTALYSGFYVNELLSRVLEPETAYPQLFQNYLRCLT 119 Query: 120 CHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + E LL +G+G+D C +G D + + Sbjct: 120 GLASNTQQVEPYLRHFEFELLHTLGYGVDFCHCAGSGKIVDENMTYRYREEKGFIASLIK 179 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 ++ + D +L++A + T + AL+ + + RE F +L Sbjct: 180 DNLTFYGRDLLAFEAREFHDPATLQAAKRFT-----RMALKPYLGNKPLKSRELFTQYVL 234 >gi|68248937|ref|YP_248049.1| DNA repair protein RecO [Haemophilus influenzae 86-028NP] gi|81336652|sp|Q4QNK8|RECO_HAEI8 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|68057136|gb|AAX87389.1| DNA repair protein RecO [Haemophilus influenzae 86-028NP] Length = 236 Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats. Identities = 36/235 (15%), Positives = 73/235 (31%), Gaps = 11/235 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + Sbjct: 7 RGFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKRSSWKSVLQPFTPLLLRWTGKST 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + L G L R + P L+ L Sbjct: 67 LKTLTKAEPAAITLP---LQQIALYSGFYVNELLTRVIESETPNPALFQHYLKCLTGLAT 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + + E LL+ +G+G+D C +G D + + Sbjct: 124 ETNVEPTLRLFEFQLLQMLGYGVDFLHCAGSGEPVDFSMTYRYREEKGFVASLVKDNLTF 183 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 ++ D ++A + T + AL+ + RE F +L Sbjct: 184 YGRDLLAFEALDFSDDAVRQAAKRFT-----RIALKPYLGDKPLKSRELFTQNIL 233 >gi|145628684|ref|ZP_01784484.1| DNA repair protein RecO [Haemophilus influenzae 22.1-21] gi|145638757|ref|ZP_01794366.1| DNA repair protein RecO [Haemophilus influenzae PittII] gi|144979154|gb|EDJ88840.1| DNA repair protein RecO [Haemophilus influenzae 22.1-21] gi|145272352|gb|EDK12260.1| DNA repair protein RecO [Haemophilus influenzae PittII] gi|309750247|gb|ADO80231.1| DNA repair protein RecO [Haemophilus influenzae R2866] Length = 236 Score = 128 bits (321), Expect = 8e-28, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 73/235 (31%), Gaps = 11/235 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + Sbjct: 7 RGFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARTKRSPWKSVLQPFTPLLLRWTGKST 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + L G L R + P L+ L Sbjct: 67 LKTLTKAEPAAITLP---LQQIALYSGFYVNELLTRVIEPETPNPALFQYYLKCLTGLAT 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + I E LL+ +G+G+D C +G D + + Sbjct: 124 ETNIEPTLRLFEFQLLQILGYGVDFLHCAGSGEPVDFSMTYRYREEKGFIASLVKDNLSF 183 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 ++ D ++A + T + AL+ + RE F +L Sbjct: 184 YGRDLLAFEALDFSDNAVRQAAKRFT-----RIALKPYLGDKPLKSRELFTQNIL 233 >gi|145634671|ref|ZP_01790380.1| DNA repair protein RecO [Haemophilus influenzae PittAA] gi|229844576|ref|ZP_04464716.1| DNA repair protein RecO [Haemophilus influenzae 6P18H1] gi|145268216|gb|EDK08211.1| DNA repair protein RecO [Haemophilus influenzae PittAA] gi|229812825|gb|EEP48514.1| DNA repair protein RecO [Haemophilus influenzae 6P18H1] Length = 236 Score = 128 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 73/235 (31%), Gaps = 11/235 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + Sbjct: 7 RGFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKRSSWKSVLQPFTPLLLRWTGKST 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + L G L R + P L+ L Sbjct: 67 LKTLTKAEPAAITLP---LQQIALYSGFYVNELLTRVIESETPNPALFQHYLKCLTGLAT 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + I E LL+ +G+G+D C +G D + + Sbjct: 124 ETNIEPTLRLFEFQLLQILGYGVDFLHCAGSGKPVDFSMTYRYREEKGFVASLVKDNLTF 183 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 ++ D ++A + T + AL+ + RE F +L Sbjct: 184 YGRDLLAFEALDFSDDAVRQAAKRFT-----RIALKPYLGDKPLKSRELFTQNIL 233 >gi|145640278|ref|ZP_01795862.1| DNA repair protein RecO [Haemophilus influenzae R3021] gi|145274864|gb|EDK14726.1| DNA repair protein RecO [Haemophilus influenzae 22.4-21] Length = 236 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 36/235 (15%), Positives = 73/235 (31%), Gaps = 11/235 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + Sbjct: 7 RGFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARTKRSSWKSVLQPFTPLLLRWTGKST 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + L G L R + P L+ L Sbjct: 67 LKTLTKAEPAAITLP---LQQIALYSGFYVNELLTRVIESETPNPALFQHYLKCLTGLAT 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + + E LL+ +G+G+D C +G D + + Sbjct: 124 ETNVEPTLRLFEFQLLQILGYGVDFLHCAGSGEPVDCTMTYRYREEKGFIASLVKDNLTF 183 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 ++ D ++A + T + AL+ + RE F +L Sbjct: 184 YGRDLLAFEALDFSDDAVRQAAKRFT-----RIALKPYLGDKPLKSRELFTQNIL 233 >gi|28899344|ref|NP_798949.1| DNA repair protein RecO [Vibrio parahaemolyticus RIMD 2210633] gi|260365943|ref|ZP_05778433.1| DNA repair protein RecO [Vibrio parahaemolyticus K5030] gi|260878965|ref|ZP_05891320.1| DNA repair protein RecO [Vibrio parahaemolyticus AN-5034] gi|260898318|ref|ZP_05906814.1| DNA repair protein RecO [Vibrio parahaemolyticus Peru-466] gi|260899639|ref|ZP_05908034.1| DNA repair protein RecO [Vibrio parahaemolyticus AQ4037] gi|31340321|sp|Q87LP1|RECO_VIBPA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|28807580|dbj|BAC60833.1| DNA repair protein RecO [Vibrio parahaemolyticus RIMD 2210633] gi|308085237|gb|EFO34932.1| DNA repair protein RecO [Vibrio parahaemolyticus Peru-466] gi|308090490|gb|EFO40185.1| DNA repair protein RecO [Vibrio parahaemolyticus AN-5034] gi|308110552|gb|EFO48092.1| DNA repair protein RecO [Vibrio parahaemolyticus AQ4037] gi|308113207|gb|EFO50747.1| DNA repair protein RecO [Vibrio parahaemolyticus K5030] gi|328474123|gb|EGF44928.1| DNA repair protein RecO [Vibrio parahaemolyticus 10329] Length = 243 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 76/229 (33%), Gaps = 11/229 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R + LQ + + W + + Sbjct: 13 FVLHRRPYSESSLILDVFSEEYGRITLMAKGARSKRSNLKGALQPFTPLLLKWSGKGS-- 70 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + L + + R L P L+ L Sbjct: 71 -MKTLRQAEPISLGLPLFGINLYSAMYVNELVGRVLMAEVPMPALFHDYLHALTELAQCE 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL ++G+G+D C TG D + L Sbjct: 130 NPEPALRRFELALLSSMGYGVDFLHCAGTGEPVDPEMTYRYREQKGFIASVRRDNLTFLG 189 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFL 233 E + + + LK+A + T + AL+ + RE F+ Sbjct: 190 NELIAISERRFVTKEQLKAAKRFT-----RIALKPYLGGKPLKSRELFI 233 >gi|323491196|ref|ZP_08096382.1| DNA repair protein RecO [Vibrio brasiliensis LMG 20546] gi|323314564|gb|EGA67642.1| DNA repair protein RecO [Vibrio brasiliensis LMG 20546] Length = 243 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 74/231 (32%), Gaps = 11/231 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R + LQ + + W + Sbjct: 10 FVLHRRPYSESSLILDVFSEEYGRVTLMSKGARSKRSNLKGALQPFTPLLLKWSGNGS-- 67 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + LS + + R L P L+ L Sbjct: 68 -MKTLRQAEPISLGLPLSGINLYSAMYVNELVGRVLMAEVPMPALFHDYLHALTELAQCD 126 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL +L +G+G+D C TG + + Sbjct: 127 NPEPALRRFELAMLSAMGYGVDFMHCAGTGEPVEPNMTYRYREQKGFIASVRKDNLTFYG 186 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 E + + LK+A + T + AL+ + RE F+ + Sbjct: 187 SELIAISERRFTTKEQLKAAKRFT-----RIALKPYLGGKPLKSRELFISR 232 >gi|16272284|ref|NP_438496.1| DNA repair protein RecO [Haemophilus influenzae Rd KW20] gi|145631422|ref|ZP_01787192.1| DNA repair protein RecO [Haemophilus influenzae R3021] gi|260581202|ref|ZP_05849021.1| DNA repair protein RecO [Haemophilus influenzae RdAW] gi|260582574|ref|ZP_05850364.1| DNA repair protein RecO [Haemophilus influenzae NT127] gi|1172897|sp|P44642|RECO_HAEIN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|1573301|gb|AAC21994.1| DNA repair protein (recO) [Haemophilus influenzae Rd KW20] gi|144982959|gb|EDJ90468.1| DNA repair protein RecO [Haemophilus influenzae R3021] gi|260092127|gb|EEW76071.1| DNA repair protein RecO [Haemophilus influenzae RdAW] gi|260094385|gb|EEW78283.1| DNA repair protein RecO [Haemophilus influenzae NT127] gi|301169037|emb|CBW28634.1| gap repair protein [Haemophilus influenzae 10810] Length = 236 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 73/235 (31%), Gaps = 11/235 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + Sbjct: 7 RGFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKRSSWKSVLQPFTPLLLRWTGKST 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + L G L R + P L+ L Sbjct: 67 LKTLTKAEPAAITLP---LQQIALYSGFYVNELLTRVIESETPNPALFQHYLKCLTGLAT 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + I E LL+ +G+G+D C +G D + + Sbjct: 124 ETNIEPTLRLFEFQLLQILGYGVDFLHCAGSGEPVDFSMTYRYREEKGFIASLVKDNLTF 183 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 ++ D ++A + T + AL+ + RE F +L Sbjct: 184 YGRDLLAFEALDFSDDAVRQAAKRFT-----RIALKPYLGDKPLKSRELFTQNIL 233 >gi|149192069|ref|ZP_01870294.1| DNA repair protein RecO [Vibrio shilonii AK1] gi|148834094|gb|EDL51106.1| DNA repair protein RecO [Vibrio shilonii AK1] Length = 234 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 78/235 (33%), Gaps = 11/235 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R + LQ + + W + Sbjct: 8 FVLHRRPYSESSLILDVFSEEYGRVTLLSKGARSKRSNLKGALQPFTPLLLKWSGGGS-- 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + LS + + R L P L+ L + Sbjct: 66 -MKTLRQAEAISLGLPLSGINLYSAMYVNELIARVLASEIPFPALFHDYLQALTELAHNT 124 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL +G+G+D C TG + + L Sbjct: 125 NPEPALRRFELALLSAMGYGVDFLHCAGTGEPIEPTMTYRYREQKGFIASVRKDNLTFLG 184 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLLEL 239 E + L++A + T + AL+ + RE FL +L +L Sbjct: 185 EELIAISERRFNSKTQLQAAKRFT-----RIALKPYLGGKPLKSRELFLPRLKQL 234 >gi|145636400|ref|ZP_01792069.1| DNA repair protein RecO [Haemophilus influenzae PittHH] gi|145270565|gb|EDK10499.1| DNA repair protein RecO [Haemophilus influenzae PittHH] Length = 236 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 73/235 (31%), Gaps = 11/235 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + Sbjct: 7 RGFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKRSSWKSVLQPFTPLLLRWTGKST 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + L G L R + P L+ L Sbjct: 67 LKTLTKAEPAAITLP---LQQIALYSGFYVNELLTRVIESETPNPALFQHYLKCLTGLAT 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + I E LL+ +G+G+D C +G D + + Sbjct: 124 ETNIEPTLRLFEFQLLQILGYGVDFLHCAGSGEPVDFSMTYRYREEKGFLASLVKDNLTF 183 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 ++ D ++A + T + AL+ + RE F +L Sbjct: 184 YGRDLLAFEALDFSDDAVRQAAKRFT-----RIALKPYLGDKPLKSRELFTQNIL 233 >gi|163802960|ref|ZP_02196847.1| DNA repair protein RecO [Vibrio sp. AND4] gi|159173250|gb|EDP58078.1| DNA repair protein RecO [Vibrio sp. AND4] Length = 243 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 76/229 (33%), Gaps = 11/229 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R + LQ + + W + + Sbjct: 13 FVLHRRPYSESSLILDVFSEEYGRVTLMAKGARSKRSNLKGALQPFTPLLLKWSGKSS-- 70 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + L + + R L P L+ L Sbjct: 71 -MKTLRQAEAISLGLPLFGINLYSAMYVNELVGRVLMAEVPMPALFHDYLHALTELAQND 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL ++G+G+D C TG D + L Sbjct: 130 NPEPALRRFELALLSSLGYGVDFLHCAGTGEPVDPEMTYRYREQKGFIASVRRDNLTFLG 189 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFL 233 E + + + LK+A + T + AL+ + RE F+ Sbjct: 190 NELIAISERRFVTKEQLKAAKRFT-----RVALKPYLGGKPLKSRELFI 233 >gi|148827479|ref|YP_001292232.1| DNA repair protein RecO [Haemophilus influenzae PittGG] gi|166221894|sp|A5UGE3|RECO_HAEIG RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|148718721|gb|ABQ99848.1| DNA repair protein RecO [Haemophilus influenzae PittGG] Length = 236 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 73/235 (31%), Gaps = 11/235 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + Sbjct: 7 RGFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKRSSWKSVLQPFTPLLLRWTGKST 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + L G L R + P L+ L Sbjct: 67 LKTLAKAEPAAITLP---LQQIALYSGFYVNELLTRVIESETPNPALFQHYLKCLTGLAT 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + I E LL+ +G+G+D C +G D + + Sbjct: 124 ETNIEPTLRLFEFQLLQILGYGVDFLHCAGSGEPVDFSMTYRYREEKGFIASLVKDNLTF 183 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 ++ D ++A + T + AL+ + RE F +L Sbjct: 184 YGRDLLAFEALDFSDDAVRQAAKRFT-----RIALKPYLGDKPLKSRELFTQNIL 233 >gi|152977879|ref|YP_001343508.1| DNA repair protein RecO [Actinobacillus succinogenes 130Z] gi|171472920|sp|A6VKS6|RECO_ACTSZ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|150839602|gb|ABR73573.1| DNA repair protein RecO [Actinobacillus succinogenes 130Z] Length = 237 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 40/242 (16%), Positives = 78/242 (32%), Gaps = 13/242 (5%) Query: 1 MYWQD--DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRV 56 M + +L + Y E ++++++ T + GR + ++ R + +LQ + + Sbjct: 1 MAIETFQRGFVLHRKPYSETSLLVDLFTEETGRLTVLAKGARAKRSAWKGVLQPFTPLLL 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 W + A + A L + G L R + P EL+ Sbjct: 61 RWSGKGALKTLTKAEP---AAIALPLQQTALFSGFYVNELLCRVIEAETPNGELFQDYLH 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + E LL +G+G+D T C +G D + Sbjct: 118 CLTRLASEDGVEPALRTFEFQLLTMLGYGVDFTHCAGSGEPVDEAMTYRYREEKGFTASL 177 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 + ++ D +A + T + AL+ + + RE F Sbjct: 178 IKDNATFYGRDLLAFEARDFRDPAVRSAAKRFT-----RMALKPYLGNKPLKSRELFAHN 232 Query: 236 LL 237 +L Sbjct: 233 IL 234 >gi|145632581|ref|ZP_01788315.1| DNA repair protein RecO [Haemophilus influenzae 3655] gi|144986776|gb|EDJ93328.1| DNA repair protein RecO [Haemophilus influenzae 3655] Length = 236 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 74/235 (31%), Gaps = 11/235 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + A Sbjct: 7 RGFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKRSSWKSVLQPFTPLLLRWTGKSA 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + L G L R + P L+ L Sbjct: 67 LKTLTKAEPAAITLP---LQQIALYSGFYVNELLTRVIESETPNPALFQHYLKCLTGLAT 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 S + E LL+ +G+G+D C +G D + + Sbjct: 124 ESNVEPTLRLFEFQLLQILGYGVDFLHCAGSGEPVDCTMTYRYREEKGFIASLVKDNLTF 183 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 ++ D ++A + T + AL+ + RE F +L Sbjct: 184 YGRDLLAFEALDFSDDAVRQAAKRFT-----RIALKPYLGDKPLKSRELFTQNIL 233 >gi|260771273|ref|ZP_05880200.1| DNA recombination and repair protein RecO [Vibrio furnissii CIP 102972] gi|260613870|gb|EEX39062.1| DNA recombination and repair protein RecO [Vibrio furnissii CIP 102972] gi|315179120|gb|ADT86034.1| DNA repair protein RecO [Vibrio furnissii NCTC 11218] Length = 241 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 74/228 (32%), Gaps = 11/228 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R + LQ + + W + Sbjct: 9 FVLHRRPYSETSLILDVFSEEYGRLTLLAKGARSKRSNLKGALQPFTPLLLKWSGNSS-- 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + L+ + + R L P L+ L Sbjct: 67 -MKTLRQAEAISLGLPLTGIHLYSAMYVNELVGRVLAPEVPSPGLFHDYLFALTELAQSD 125 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL ++G+G+D C TG D + L Sbjct: 126 NPEPPLRRFELALLSSLGYGVDFLHCAGTGEPVDPAMTYRYREQKGFIASVRRDNLTFLG 185 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 E + + L++A + T + AL+ + RE F Sbjct: 186 NELIAISERRFTTKEQLQAAKRFT-----RIALKPYLGGKPLKSRELF 228 >gi|58418862|gb|AAW70877.1| Recombinational DNA repair protein RecO [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 245 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 78/242 (32%), Positives = 120/242 (49%), Gaps = 9/242 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ II+ + YG+K++IL + + +G+ G R + Q NL+ W + Sbjct: 6 MRWKDEGIIIAAKKYGDKSLILSLFMKNHGKCRGLTRLTNDSSYK--FQVSNLLHAEWSA 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLN 119 +L +NLG F+ E++ES SL + S + + LPE EPC LYD F++ Sbjct: 64 KLPENLGFFKCELIESPFHHFFQDSLKSITIVSFSSILEKVLPESEPCAVLYDNFQYFID 123 Query: 120 CHKI-PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 K ++ +EL+LL +GF LDL+KC VTGV ++L ++SPK+G AV + VG Sbjct: 124 VIKHGSEPWQGHYLNLELLLLAQLGFKLDLSKCAVTGVKENLQFISPKTGRAVSKKVGDY 183 Query: 179 YAEKMLVLPSFLWKEEQT-----IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 YA+K+L P L + ++T YFLNKY + R L Sbjct: 184 YADKLLPFPQMLHDVYNNNLQNSYSYQEFQLGLKVTGYFLNKYLFSQLNMRFPESRNLIL 243 Query: 234 GK 235 Sbjct: 244 SL 245 >gi|330814140|ref|YP_004358379.1| GTP-binding protein Era [Candidatus Pelagibacter sp. IMCC9063] gi|327487235|gb|AEA81640.1| GTP-binding protein Era [Candidatus Pelagibacter sp. IMCC9063] Length = 228 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 88/238 (36%), Gaps = 12/238 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D +L + +Y E + I +T ++G H G + S + + LQ GN +NW+S Sbjct: 1 MNWKDIGYLLKISNYSENSSIATFVTCEHGLHKGVIYGATSKKKKNYLQIGNKFSLNWKS 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + LG + E+ + AK + L +QS+ L F Sbjct: 61 KSEDALGYYDLELKNAVTAKFFDEPIKLSFIQSLSELCCKTLAERYDYSELFDYTDFFIN 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + K+++ E LL IGF L + + L Sbjct: 121 NISKANALKLYILWEKELLTAIGFEL------------NPDNKNFNFYKNNLSQWILEID 168 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 ++ + P+FL + L + + L ++ + N I +RE KL E Sbjct: 169 KQKFLYPNFLIDSNSVYEDTDLYEGLVINKFILKRFVFEPNRIRFPEVRERIEKKLNE 226 >gi|161899045|ref|YP_198119.2| DNA repair protein RecO [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 240 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 78/242 (32%), Positives = 120/242 (49%), Gaps = 9/242 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ II+ + YG+K++IL + + +G+ G R + Q NL+ W + Sbjct: 1 MRWKDEGIIIAAKKYGDKSLILSLFMKNHGKCRGLTRLTNDSSYK--FQVSNLLHAEWSA 58 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLN 119 +L +NLG F+ E++ES SL + S + + LPE EPC LYD F++ Sbjct: 59 KLPENLGFFKCELIESPFHHFFQDSLKSITIVSFSSILEKVLPESEPCAVLYDNFQYFID 118 Query: 120 CHKI-PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 K ++ +EL+LL +GF LDL+KC VTGV ++L ++SPK+G AV + VG Sbjct: 119 VIKHGSEPWQGHYLNLELLLLAQLGFKLDLSKCAVTGVKENLQFISPKTGRAVSKKVGDY 178 Query: 179 YAEKMLVLPSFLWKEEQT-----IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 YA+K+L P L + ++T YFLNKY + R L Sbjct: 179 YADKLLPFPQMLHDVYNNNLQNSYSYQEFQLGLKVTGYFLNKYLFSQLNMRFPESRNLIL 238 Query: 234 GK 235 Sbjct: 239 SL 240 >gi|88607051|ref|YP_505316.1| DNA repair protein RecO [Anaplasma phagocytophilum HZ] gi|123494993|sp|Q2GJY5|RECO_ANAPZ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|88598114|gb|ABD43584.1| DNA repair protein RecO [Anaplasma phagocytophilum HZ] Length = 245 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 11/245 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD +I+ + YG+ IL V TR +G +R + + LQ G+ V V WR+ Sbjct: 1 MQWQDHGMIVSMTPYGDTRSILSVFTRNHGICNAMIRLNKKKQS---LQIGDRVCVTWRA 57 Query: 61 RLAQNLGEFRFEVLESHC-AKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFL 118 RLA NLG F + S L L S+ + +P + LYD L F Sbjct: 58 RLANNLGYFNSCEIISSAFYAYFQDHSKLLCLSSVTSTIYKSVPTNDAHPILYDYLIEFA 117 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + ++++EL +L +GF LDL++C V +LL++SPK+G A+ G+ Sbjct: 118 EAAECGGHWYNEYLKLELEILSQLGFALDLSRCAVYHCEDNLLYISPKTGRAISERAGVS 177 Query: 179 YAEKMLVLPSFLWK-----EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 Y + LP L + Q+ YFL+++ L R+ Sbjct: 178 YRHLLFPLPQILRDLHNGTHTEQCSRKEFLLCLQILGYFLHRHLLSD-DSKFLEQRKEMT 236 Query: 234 GKLLE 238 + E Sbjct: 237 ALIYE 241 >gi|261491681|ref|ZP_05988262.1| DNA recombination protein RecO [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494444|ref|ZP_05990930.1| DNA recombination protein RecO [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309828|gb|EEY11045.1| DNA recombination protein RecO [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312634|gb|EEY13756.1| DNA recombination protein RecO [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 240 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 79/238 (33%), Gaps = 12/238 (5%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 WQ A +L R Y E ++++E T +GR + + R + +LQ + V W Sbjct: 5 QWQ-RAFVLHRREYSESSLLVEFFTEHHGRITLLAKGARRARSPLKAVLQPFTPLLVRWS 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + + ++ G L R L + EL+ + Sbjct: 64 GKGDLKTLTKAEP---AALTLPMETAALYSGFYINEVLARVLENQTAYPELFQHYLRCMT 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 I I E LK +G+G+D T C TG+ D + L Sbjct: 121 ELATQHQIEPILRTFEFHTLKALGYGVDFTHCTATGLPIDPKMSYQFRESEGFIASLLQN 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKL 236 L + + + + ++A + T + AL+ + RE F L Sbjct: 181 NNSFLGCDLLAFAQLDFSEKQTQQAAKRFT-----RIALKPYLGSQPLKSRELFQSIL 233 >gi|329123646|ref|ZP_08252206.1| recombination protein O [Haemophilus aegyptius ATCC 11116] gi|327469845|gb|EGF15310.1| recombination protein O [Haemophilus aegyptius ATCC 11116] Length = 236 Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 74/235 (31%), Gaps = 11/235 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + A Sbjct: 7 RGFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKRSSWKSVLQPFTPLLLRWTGKSA 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + L G L R + P L+ L Sbjct: 67 LKTLTKAEPAAITLP---LQQIALYSGFYVNELLTRVIESETPNPALFQHYLKCLTGLAT 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + + E LL+ +G+G+D C +G D + + Sbjct: 124 ETNVEPTLRLFEFQLLQILGYGVDFLHCAGSGEPVDCTMTYRYREEKGFIASLVKDNLTF 183 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 ++ D ++A + T + AL+ + RE F +L Sbjct: 184 YGRDLLAFEALDFSDDAVRQAAKRFT-----RIALKPYLGDKPLKSRELFSQHIL 233 >gi|153835469|ref|ZP_01988136.1| DNA repair protein RecO [Vibrio harveyi HY01] gi|269960403|ref|ZP_06174776.1| DNA repair protein recO [Vibrio harveyi 1DA3] gi|148867980|gb|EDL67177.1| DNA repair protein RecO [Vibrio harveyi HY01] gi|269834830|gb|EEZ88916.1| DNA repair protein recO [Vibrio harveyi 1DA3] Length = 243 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 76/229 (33%), Gaps = 11/229 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R + LQ + + W + + Sbjct: 13 FVLHRRPYSESSLILDVFSEEYGRITLMAKGARSKRSNLKGALQPFTPLLLKWSGKGS-- 70 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + L + + R L P L+ L Sbjct: 71 -MKTLRQAEPISLGLPLFGINLYSAMYVNELVGRVLMAEVPMPALFHDYLHALTELAQSD 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL ++G+G+D C TG D + L Sbjct: 130 NPEPGLRRFELALLSSMGYGVDFLHCAGTGEPVDPEMTYRYREQKGFIASVRRDNLTFLG 189 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFL 233 E + + + LK+A + T + AL+ + RE F+ Sbjct: 190 NELIAISERRFVTKEQLKAAKRFT-----RMALKPYLGGKPLKSRELFI 233 >gi|14195092|sp|P57974|RECO_PASMU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 240 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 77/239 (32%), Gaps = 11/239 (4%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 WQ +L ++Y E ++++E+ T + GR + ++ R + ILQ + + W Sbjct: 7 NWQ-RGFVLHRKAYSETSLLVELFTEETGRLTVLAKGARAKRSALKGILQPFTPLLLRWS 65 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + A L + G L R L L+ L Sbjct: 66 GRSELKTLTKVEP---AAIALPLQQTALYSGFYVNELLCRVLEPETGYPHLFQDYLRCLT 122 Query: 120 CHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 I E LL+ +G+G+D C +G D + + Sbjct: 123 GLASAEHLIEPSLRHFEFQLLQTLGYGVDFCHCAGSGELVDENMTYRYREEKGFIASLIK 182 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 + Q D+ +L++A + T L +Y RE F +L Sbjct: 183 DNLTFYGRELLAFDARQFHDSATLQAAKRFTRIALKQYL---GNKPL-KSRELFTQYML 237 >gi|15603732|ref|NP_246806.1| DNA repair protein RecO [Pasteurella multocida subsp. multocida str. Pm70] gi|12722295|gb|AAK03951.1| RecO [Pasteurella multocida subsp. multocida str. Pm70] Length = 236 Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 77/239 (32%), Gaps = 11/239 (4%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 WQ +L ++Y E ++++E+ T + GR + ++ R + ILQ + + W Sbjct: 3 NWQ-RGFVLHRKAYSETSLLVELFTEETGRLTVLAKGARAKRSALKGILQPFTPLLLRWS 61 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + A L + G L R L L+ L Sbjct: 62 GRSELKTLTKVEP---AAIALPLQQTALYSGFYVNELLCRVLEPETGYPHLFQDYLRCLT 118 Query: 120 CHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 I E LL+ +G+G+D C +G D + + Sbjct: 119 GLASAEHLIEPSLRHFEFQLLQTLGYGVDFCHCAGSGELVDENMTYRYREEKGFIASLIK 178 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 + Q D+ +L++A + T L +Y RE F +L Sbjct: 179 DNLTFYGRELLAFDARQFHDSATLQAAKRFTRIALKQYL---GNKPL-KSRELFTQYML 233 >gi|319896660|ref|YP_004134853.1| DNA repair protein rec0 [Haemophilus influenzae F3031] gi|317432162|emb|CBY80513.1| DNA repair protein Rec0 [Haemophilus influenzae F3031] Length = 236 Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 74/235 (31%), Gaps = 11/235 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + A Sbjct: 7 RGFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKRSSWKSVLQPFTPLLLRWTGKSA 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + L G L R + P L+ L Sbjct: 67 LKTLTKAEPAAITLP---LQQIALYSGFYVNELLTRVIESETPNPALFQHYLKCLTGLAT 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + + E LL+ +G+G+D C +G D + + Sbjct: 124 ETNVEPTLRLFEFQLLQILGYGVDFLHCAGSGEPVDCTMTYRYREEKGFIASLVKDNLTF 183 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 ++ D ++A + T + AL+ + RE F +L Sbjct: 184 YGRDLLAFETLDFSDDSVRQAAKRFT-----RIALKPYLGDKPLKSRELFSQHIL 233 >gi|327484951|gb|AEA79358.1| DNA recombination and repair protein RecO [Vibrio cholerae LMA3894-4] Length = 241 Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 71/228 (31%), Gaps = 11/228 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + + R + LQ + + W + Sbjct: 9 FVLHRRPYSESSLILDVFSEEYGRVSLMAKGARGKRSNLKGALQPFTPLLLKWSGNSS-- 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + LS + + R L L+ L + Sbjct: 67 -MKTLRQAEPISLGLPLSGVYLYSAMYINELVDRVLMPEVASPGLFHDYLFALTELAQST 125 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL +G+G+D C TG + L Sbjct: 126 NPEPALRRFELALLAAMGYGVDFLHCAGTGEPVSPDMTYRYREQKGFIASVRRDNLTFLG 185 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 E + + L++A + T + AL+ + RE F Sbjct: 186 NELIAISERRFTSKEQLQAAKRFT-----RLALKPYLGGKPLKSRELF 228 >gi|153826906|ref|ZP_01979573.1| DNA repair protein RecO [Vibrio cholerae MZO-2] gi|229527067|ref|ZP_04416462.1| DNA recombination and repair protein RecO [Vibrio cholerae 12129(1)] gi|254291659|ref|ZP_04962447.1| DNA repair protein RecO [Vibrio cholerae AM-19226] gi|149739269|gb|EDM53531.1| DNA repair protein RecO [Vibrio cholerae MZO-2] gi|150422431|gb|EDN14390.1| DNA repair protein RecO [Vibrio cholerae AM-19226] gi|229335464|gb|EEO00946.1| DNA recombination and repair protein RecO [Vibrio cholerae 12129(1)] Length = 241 Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 71/228 (31%), Gaps = 11/228 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + + R + LQ + + W + Sbjct: 9 FVLHRRPYSESSLILDVFSEEYGRVSLMAKGARGKRSNLKGALQPFTPLLLKWSGNGS-- 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + LS + + R L L+ L + Sbjct: 67 -MKTLRQAEPISLGLPLSGVYLYSAMYINELVDRVLMPEVASPGLFHDYLFALTELAQST 125 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL +G+G+D C TG + L Sbjct: 126 NPEPALRRFELALLAAMGYGVDFLHCAGTGEPVSPDMTYRYREQKGFIASVRRDNLTFLG 185 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 E + + L++A + T + AL+ + RE F Sbjct: 186 NELIAISERRFTSKEQLQAAKRFT-----RLALKPYLGGKPLKSRELF 228 >gi|269965787|ref|ZP_06179884.1| DNA repair protein recO [Vibrio alginolyticus 40B] gi|269829655|gb|EEZ83892.1| DNA repair protein recO [Vibrio alginolyticus 40B] Length = 243 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 76/229 (33%), Gaps = 11/229 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R + LQ + + W + + Sbjct: 13 FVLHRRPYSESSLILDVFSEEYGRMTLMAKGARSKRSNLKGALQPFTPLLLKWSGKGS-- 70 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + L+ + + R L P L+ L Sbjct: 71 -MKTLRQAEPISLGLPLTGINLYSAMYVNELIGRILMAEVPMPALFHDYLHALTELAHNE 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL +G+G+D C TG D + L Sbjct: 130 NPEPALRRFELALLSAMGYGVDFLHCAGTGEPVDPEMTYRYREQKGFIASVRRDNLTFLG 189 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFL 233 E + + + LK+A + T + AL+ + RE F+ Sbjct: 190 NELIAISERRFVTKEQLKAAKRFT-----RIALKPYLGGKPLKSREFFI 233 >gi|319775804|ref|YP_004138292.1| DNA repair protein Rec0 [Haemophilus influenzae F3047] gi|317450395|emb|CBY86611.1| DNA repair protein Rec0 [Haemophilus influenzae F3047] Length = 236 Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 74/235 (31%), Gaps = 11/235 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + A Sbjct: 7 RGFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKRSSWKSVLQPFTPLLLRWTGKNA 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + L G L R + P L+ L Sbjct: 67 LKTLTKAEPAAITLP---LQQIALYSGFYVNELLTRVIESETPNPALFQHYLKCLTGLAT 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + + E LL+ +G+G+D C +G D + + Sbjct: 124 KTNVEPTLRLFEFQLLQILGYGVDFLHCAGSGEPVDFSMTYRYREEKGFIASLVKDNLTF 183 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 ++ D ++A + T + AL+ + RE F +L Sbjct: 184 YGRDLLAFEALDFSDDVVRQAAKRFT-----RIALKPYLGDKPLKSRELFSQHIL 233 >gi|260598948|ref|YP_003211519.1| DNA repair protein recO [Cronobacter turicensis z3032] gi|260218125|emb|CBA32921.1| DNA repair protein recO [Cronobacter turicensis z3032] Length = 245 Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 78/237 (32%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E ++I+++ + + GR + + R + LQ + V Sbjct: 1 MEGWQ-RAFVLHARPWSETSLIIDLFSEESGRVRVVAKGARRKRSNLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A LS GL + R L EL+ Sbjct: 60 WSGRGDVKN---LTSAEAVSLALPLSGITLYSGLYVNELVARVLEPETRFSELFFDYLHC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + EL LL ++G+G+D C TG D + Sbjct: 117 IQALAGATGTPEPALRRFELALLGHLGYGVDFLHCAGTGDEVDDAMTYRYREEKGFIASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + DAD+L++A + T + AL+ + RE F Sbjct: 177 VIDNTSFTGRQLKALATRDFPDADTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|254230526|ref|ZP_04923897.1| DNA repair protein RecO [Vibrio sp. Ex25] gi|262393272|ref|YP_003285126.1| DNA recombination and repair protein RecO [Vibrio sp. Ex25] gi|151936951|gb|EDN55838.1| DNA repair protein RecO [Vibrio sp. Ex25] gi|262336866|gb|ACY50661.1| DNA recombination and repair protein RecO [Vibrio sp. Ex25] Length = 243 Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 77/229 (33%), Gaps = 11/229 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R + LQ + + W + + Sbjct: 13 FVLHRRPYSESSLILDVFSEEYGRMTLMAKGARSKRSNLKGALQPFTPLLLKWSGKGS-- 70 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + L+ + + R L P L+ L Sbjct: 71 -MKTLRQAEPISLGLPLTGINLYSAMYVNELIGRILMAEVPMPALFHDYLHALTELAHNE 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL ++G+G+D C TG D + L Sbjct: 130 NPEPALRRFELALLSSMGYGVDFLHCAGTGEPVDPEMTYRYREQKGFIASVRRDNLTFLG 189 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFL 233 E + + + LK+A + T + AL+ + RE F+ Sbjct: 190 NELIAISERRFVTKEQLKAAKRFT-----RIALKPYLGGKPLKSREFFI 233 >gi|315635029|ref|ZP_07890310.1| recombination protein O [Aggregatibacter segnis ATCC 33393] gi|315476291|gb|EFU67042.1| recombination protein O [Aggregatibacter segnis ATCC 33393] Length = 247 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 81/235 (34%), Gaps = 13/235 (5%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 WQ +L +SY E +++++++T +GR + ++ R + +LQ + + W Sbjct: 14 NWQ-RGFVLHRKSYSETSLLVDLLTEDFGRISVLAKGARAKRSMLKGVLQPFTPLLLRWS 72 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + + A L + G + R L +L+ L Sbjct: 73 GRGDLKILTKAEP---AAIALPLQNVALYSGFYLNELICRVLEPETAYPQLFQHYLQCLT 129 Query: 120 CHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + E LL+ +G+G+D T C +G + + + Sbjct: 130 QLALSQTHVEPALRTFEFQLLRTLGYGIDFTHCAGSGKAVEADMTYRYREEKGFIASLIK 189 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 +++ Q + L +A + T + AL+ + RE F Sbjct: 190 DNLTFYGRELLAFEQTQFDEPSVLSAAKRFT-----RIALKPYLGDKPLKSRELF 239 >gi|153803097|ref|ZP_01957683.1| DNA repair protein RecO [Vibrio cholerae MZO-3] gi|153830872|ref|ZP_01983539.1| DNA repair protein RecO [Vibrio cholerae 623-39] gi|124121379|gb|EAY40122.1| DNA repair protein RecO [Vibrio cholerae MZO-3] gi|148873641|gb|EDL71776.1| DNA repair protein RecO [Vibrio cholerae 623-39] Length = 241 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 71/228 (31%), Gaps = 11/228 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + + R + LQ + + W + Sbjct: 9 FVLHRRPYSESSLILDVFSEEYGRVSLMAKGARGKRSNLKGALQPFTPLLLKWSGNGS-- 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + LS + + R L L+ L + Sbjct: 67 -MKTLRQAEPISLGLPLSGVYLYSAMYINELVDRVLMPEVASPGLFHDYLFALTELAQST 125 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL +G+G+D C TG + L Sbjct: 126 NPEPALRRFELALLAAMGYGVDFLHCAGTGEPVSPDMTYRYREQKGFIASIRRDNLTFLG 185 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 E + + L++A + T + AL+ + RE F Sbjct: 186 NELIAISERRFTSKEQLQAAKRFT-----RLALKPYLGGKPLKSRELF 228 >gi|229521286|ref|ZP_04410706.1| DNA recombination and repair protein RecO [Vibrio cholerae TM 11079-80] gi|229341818|gb|EEO06820.1| DNA recombination and repair protein RecO [Vibrio cholerae TM 11079-80] Length = 241 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 72/228 (31%), Gaps = 11/228 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + + R + LQ + + W + Sbjct: 9 FVLHRRPYSESSLILDVFSEEYGRVTLMAKGARGKRSNLKGALQPFTPLLLKWSGNGS-- 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + LS + + R L C L+ L + Sbjct: 67 -MKTLRQAEPISLGLPLSGVYLYSAMYINELVDRVLMPEVACPGLFHDYLFALTELAQST 125 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL +G+G+D C TG + L Sbjct: 126 NPEPALRRFELALLAAMGYGVDFLHCAGTGEPVSPDMTYRYREQKGFIASVRRDNLTFLG 185 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 E + + L++A + T + AL+ + RE F Sbjct: 186 NELIAISERRFTSKEQLQAAKRFT-----RLALKPYLGGKPLKSRELF 228 >gi|229524446|ref|ZP_04413851.1| DNA recombination and repair protein RecO [Vibrio cholerae bv. albensis VL426] gi|262190711|ref|ZP_06048942.1| DNA recombination and repair protein RecO [Vibrio cholerae CT 5369-93] gi|229338027|gb|EEO03044.1| DNA recombination and repair protein RecO [Vibrio cholerae bv. albensis VL426] gi|262033423|gb|EEY51930.1| DNA recombination and repair protein RecO [Vibrio cholerae CT 5369-93] Length = 241 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 71/228 (31%), Gaps = 11/228 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + + R + LQ + + W + Sbjct: 9 FVLHRRPYSESSLILDVFSEEYGRVTLMAKGARGKRSNLKGALQPFTPLLLKWSGNSS-- 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + LS + + R L L+ L + Sbjct: 67 -MKTLRQAEPISLGLPLSGVYLYSAMYINELVDRVLMPEVASPGLFHDYLFALTELAQST 125 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL +G+G+D C TG + L Sbjct: 126 NPEPALRRFELALLAAMGYGVDFLHCAGTGEPVSPDMTYRYREQKGFIASVRRDNLTFLG 185 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 E + + L++A + T + AL+ + RE F Sbjct: 186 NELIAISERRFTSKEQLQAAKRFT-----RLALKPYLGGKPLKSRELF 228 >gi|254507488|ref|ZP_05119622.1| DNA repair protein RecO [Vibrio parahaemolyticus 16] gi|219549558|gb|EED26549.1| DNA repair protein RecO [Vibrio parahaemolyticus 16] Length = 247 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 75/232 (32%), Gaps = 11/232 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R + LQ + + W + Sbjct: 16 FVLHRRPYSESSLILDVFSEEYGRVTLMSKGARSKRSNLKGALQPFTPLLLKWSGNGS-- 73 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + L+ G+ + R L P L+ L Sbjct: 74 -MKTLRQAEPISLGLPLTGINLYSGMYVNELIGRVLMAEVPMPALFHDYLHVLTELAQCD 132 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL +G+G+D C +G + + Sbjct: 133 NPEPALRRFELALLSAMGYGVDFLHCAGSGEPIEPTMTYRYREQKGFIASVRYDNLTFKG 192 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKL 236 E + + LK+A + T + AL+ + RE F+ + Sbjct: 193 DELIAISERRFTTKEQLKAAKRFT-----RIALKPYLGGKPLKSRELFVAMI 239 >gi|15642455|ref|NP_232088.1| DNA repair protein RecO [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121590991|ref|ZP_01678310.1| DNA repair protein RecO [Vibrio cholerae 2740-80] gi|121728978|ref|ZP_01681982.1| DNA repair protein RecO [Vibrio cholerae V52] gi|147673381|ref|YP_001217961.1| DNA repair protein RecO [Vibrio cholerae O395] gi|153214505|ref|ZP_01949414.1| DNA repair protein RecO [Vibrio cholerae 1587] gi|227082580|ref|YP_002811131.1| DNA repair protein RecO [Vibrio cholerae M66-2] gi|229507481|ref|ZP_04396986.1| DNA recombination and repair protein RecO [Vibrio cholerae BX 330286] gi|229512324|ref|ZP_04401803.1| DNA recombination and repair protein RecO [Vibrio cholerae B33] gi|229519460|ref|ZP_04408903.1| DNA recombination and repair protein RecO [Vibrio cholerae RC9] gi|229606986|ref|YP_002877634.1| DNA repair protein RecO [Vibrio cholerae MJ-1236] gi|254226244|ref|ZP_04919837.1| DNA repair protein RecO [Vibrio cholerae V51] gi|254849584|ref|ZP_05238934.1| DNA repair protein recO [Vibrio cholerae MO10] gi|255746870|ref|ZP_05420815.1| DNA recombination and repair protein RecO [Vibrio cholera CIRS 101] gi|258622343|ref|ZP_05717368.1| DNA repair protein recO [Vibrio mimicus VM573] gi|258626727|ref|ZP_05721549.1| DNA repair protein recO [Vibrio mimicus VM603] gi|261211553|ref|ZP_05925841.1| DNA recombination and repair protein RecO [Vibrio sp. RC341] gi|262162035|ref|ZP_06031051.1| DNA recombination and repair protein RecO [Vibrio cholerae INDRE 91/1] gi|262167290|ref|ZP_06035000.1| DNA recombination and repair protein RecO [Vibrio cholerae RC27] gi|262170592|ref|ZP_06038270.1| DNA recombination and repair protein RecO [Vibrio mimicus MB-451] gi|298500184|ref|ZP_07009989.1| DNA repair protein RecO [Vibrio cholerae MAK 757] gi|20139781|sp|Q9KPB4|RECO_VIBCH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|172047581|sp|A5F5H6|RECO_VIBC3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254790740|sp|C3LR02|RECO_VIBCM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|9657037|gb|AAF95601.1| DNA repair protein RecO [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547168|gb|EAX57297.1| DNA repair protein RecO [Vibrio cholerae 2740-80] gi|121628744|gb|EAX61211.1| DNA repair protein RecO [Vibrio cholerae V52] gi|124115307|gb|EAY34127.1| DNA repair protein RecO [Vibrio cholerae 1587] gi|125621217|gb|EAZ49558.1| DNA repair protein RecO [Vibrio cholerae V51] gi|146315264|gb|ABQ19803.1| DNA repair protein RecO [Vibrio cholerae O395] gi|227010468|gb|ACP06680.1| DNA repair protein RecO [Vibrio cholerae M66-2] gi|227014351|gb|ACP10561.1| DNA repair protein RecO [Vibrio cholerae O395] gi|229344149|gb|EEO09124.1| DNA recombination and repair protein RecO [Vibrio cholerae RC9] gi|229352289|gb|EEO17230.1| DNA recombination and repair protein RecO [Vibrio cholerae B33] gi|229354986|gb|EEO19907.1| DNA recombination and repair protein RecO [Vibrio cholerae BX 330286] gi|229369641|gb|ACQ60064.1| DNA recombination and repair protein RecO [Vibrio cholerae MJ-1236] gi|254845289|gb|EET23703.1| DNA repair protein recO [Vibrio cholerae MO10] gi|255735272|gb|EET90672.1| DNA recombination and repair protein RecO [Vibrio cholera CIRS 101] gi|258580983|gb|EEW05910.1| DNA repair protein recO [Vibrio mimicus VM603] gi|258585359|gb|EEW10083.1| DNA repair protein recO [Vibrio mimicus VM573] gi|260839508|gb|EEX66134.1| DNA recombination and repair protein RecO [Vibrio sp. RC341] gi|261891668|gb|EEY37654.1| DNA recombination and repair protein RecO [Vibrio mimicus MB-451] gi|262024265|gb|EEY42956.1| DNA recombination and repair protein RecO [Vibrio cholerae RC27] gi|262028284|gb|EEY46941.1| DNA recombination and repair protein RecO [Vibrio cholerae INDRE 91/1] gi|297540877|gb|EFH76931.1| DNA repair protein RecO [Vibrio cholerae MAK 757] Length = 241 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 71/228 (31%), Gaps = 11/228 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + + R + LQ + + W + Sbjct: 9 FVLHRRPYSESSLILDVFSEEYGRVTLMAKGARGKRSNLKGALQPFTPLLLKWSGNGS-- 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + LS + + R L L+ L + Sbjct: 67 -MKTLRQAEPISLGLPLSGVYLYSAMYINELVDRVLMPEVASPGLFHDYLFALTELAQST 125 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL +G+G+D C TG + L Sbjct: 126 NPEPALRRFELALLAAMGYGVDFLHCAGTGEPVSPDMTYRYREQKGFIASVRRDNLTFLG 185 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 E + + L++A + T + AL+ + RE F Sbjct: 186 NELIAISERRFTSKEQLQAAKRFT-----RLALKPYLGGKPLKSRELF 228 >gi|332188696|ref|ZP_08390410.1| DNA repair protein RecO [Sphingomonas sp. S17] gi|332011260|gb|EGI53351.1| DNA repair protein RecO [Sphingomonas sp. S17] Length = 243 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 77/243 (31%), Positives = 108/243 (44%), Gaps = 4/243 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ AIIL VR +GE I+ +TR G G+VR G+S ++P+LQ GN + WR+ Sbjct: 1 MHRVAPAIILSVRPHGEHGAIVRALTRDDGVQPGYVRGGRSRALRPVLQPGNAIIGEWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R A+ L E S LPE +P LYD L+ L Sbjct: 61 RTAEQLPALTLEPGHSRAGLHGEPLAAAGIEWLCALTAAALPEEQPYPILYDALDAVLTA 120 Query: 121 HKIPSV---IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + V+ EL+LL +GFGLDL +C VTG T DL +VSPKSG AV Sbjct: 121 IESAPSARGWAGALVRYELLLLGQLGFGLDLERCTVTGGTDDLAFVSPKSGAAVSVGAAF 180 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 Y ++ LP FL + D + +A ++T +FL + L R + Sbjct: 181 GYEARLFSLPLFLREGGAA-DWPDIFAAGRITAHFLARDILAGLRHDPMPARARLFDRFK 239 Query: 238 ELI 240 + Sbjct: 240 RAV 242 >gi|225631179|ref|ZP_03787882.1| DNA repair protein RecO [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591127|gb|EEH12306.1| DNA repair protein RecO [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 240 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 79/242 (32%), Positives = 122/242 (50%), Gaps = 9/242 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ II+ + YG+KN+IL + T+ +G+ G + + + Q NL+ W + Sbjct: 1 MRWKDEGIIIAAKKYGDKNLILSLFTKNHGKRRGLTKLTNNSNYK--FQISNLLHAEWSA 58 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLN 119 +L +NLG F E++ES L + S + + LPE EPC LYD F++ Sbjct: 59 KLPENLGFFECELIESPFHHFFQDRLKSITIVSFSSILEKVLPESEPCAMLYDNFRYFID 118 Query: 120 CHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 K + ++ +EL+LL +GF LDL+KC VTGV ++L ++SPK+G AV + VG Sbjct: 119 VIKHNNQSWQSHYLNLELLLLTQLGFKLDLSKCAVTGVKENLQFISPKTGRAVSKKVGDY 178 Query: 179 YAEKMLVLPSFLWKEEQT-----IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 YA+K+L P L + ++T YFLNKY + LR L Sbjct: 179 YADKLLPFPQMLHDVYNNTLQNSYSFQEFQLGLKVTGYFLNKYLFLQLNVKFPELRNLML 238 Query: 234 GK 235 Sbjct: 239 SL 240 >gi|262404772|ref|ZP_06081327.1| DNA recombination and repair protein RecO [Vibrio sp. RC586] gi|262349804|gb|EEY98942.1| DNA recombination and repair protein RecO [Vibrio sp. RC586] Length = 241 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 71/228 (31%), Gaps = 11/228 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL++ + +YGR + + R + LQ + + W + Sbjct: 9 FVLHRRPYSESSLILDIFSEEYGRVTLMAKGARGKRSNLKGALQPFTPLLLKWSGNGS-- 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + LS + + R L L+ L + Sbjct: 67 -MKTLRQAEPISLGLPLSGVYLYSAMYINELVDRVLMPEVASPGLFHDYLFALTELAQST 125 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL +G+G+D C TG + L Sbjct: 126 NPEPALRRFELALLAAMGYGVDFLHCAGTGEPVSPDMTYRYREQKGFIASVRRDNLTFLG 185 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 E + + L++A + T + AL+ + RE F Sbjct: 186 NELIAISERRFTSKEQLQAAKRFT-----RLALKPYLGGKPLKSRELF 228 >gi|262166500|ref|ZP_06034237.1| DNA recombination and repair protein RecO [Vibrio mimicus VM223] gi|262026216|gb|EEY44884.1| DNA recombination and repair protein RecO [Vibrio mimicus VM223] Length = 241 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 71/228 (31%), Gaps = 11/228 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + + R + LQ + + W + Sbjct: 9 FVLHRRPYSESSLILDVFSEEYGRVTLMAKGARGKRSNLKGALQPFTPLLLKWSGNGS-- 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + LS + + R L L+ L + Sbjct: 67 -MKTLRQAEPISLGLPLSGVYLYSAMYINELVDRVLMPEVATPGLFHDYLFALTELAQST 125 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL ++G+G+D C TG + L Sbjct: 126 NPEPALRRFELALLASMGYGVDFLHCAGTGEPVSPDMTYRYREQKGFIASVRRDNLTFLG 185 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 E + L++A + T + AL+ + RE F Sbjct: 186 NELIAISERSFTSKEQLQAAKRFT-----RLALKPYLGGKPLKSRELF 228 >gi|320155322|ref|YP_004187701.1| DNA recombination and repair protein RecO [Vibrio vulnificus MO6-24/O] gi|319930634|gb|ADV85498.1| DNA recombination and repair protein RecO [Vibrio vulnificus MO6-24/O] Length = 243 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 76/231 (32%), Gaps = 11/231 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + ++GR + +S R + LQ + + W + Sbjct: 11 FVLHRRPYSESSLILDVFSEEFGRITLMSKGARSKRSNLKGALQPFTPLLLKWSGKG--- 67 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + L+ + + R L + P L+ L Sbjct: 68 AMKTLRQAEPISLGLPLTGIYLYSAMYVNELVGRVLMQEVPMPGLFHDYLFALTELAQAD 127 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL +G+G+D C TG D + L Sbjct: 128 NPEPALRRFELALLAAMGYGVDFLHCAGTGEPIDPQMTYRYREQKGFIASVRRDNLTFLG 187 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 E + + + L++A + T + AL+ + RE F+ Sbjct: 188 NELIAISERRFLTKEQLQAAKRFT-----RIALKPYLGGKPLKSRELFIQM 233 >gi|218660067|ref|ZP_03515997.1| DNA repair protein RecO [Rhizobium etli IE4771] Length = 174 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 77/155 (49%), Positives = 110/155 (70%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILGV+ +GE ++I+EVMTR GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 19 MQWQDHAIILGVKRHGETSVIVEVMTRDRGRHLGLVRSGRSRAMQPVLQPGNAVEVIWRA 78 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 RL ++LGEFR E + A+++ ++ +YG+Q++ L R LPER+P L+D L + L+ Sbjct: 79 RLDEHLGEFRVEPVTLRAARMMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH 138 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 P+ G++FV+ EL +L ++GFGLDL +C TG Sbjct: 139 LHNPADAGELFVRFELAVLNDLGFGLDLAECAATG 173 >gi|229514085|ref|ZP_04403547.1| DNA recombination and repair protein RecO [Vibrio cholerae TMA 21] gi|229349266|gb|EEO14223.1| DNA recombination and repair protein RecO [Vibrio cholerae TMA 21] Length = 241 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 71/228 (31%), Gaps = 11/228 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + + R + LQ + + W + Sbjct: 9 FVLHRRPYSESSLILDVFSEEYGRVTLMAKGARGKRSNLKGALQPFTPLLLKWSGNSS-- 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + LS + + R L L+ L + Sbjct: 67 -MKTLRQAEPISLGLPLSGVYLYSAMYINELVDRVLMPEVASPGLFHDYLFALTELAQST 125 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL +G+G+D C TG + L Sbjct: 126 NPEPALRRFELALLAAMGYGVDFLHCAGTGEPVSPDMTYRYREQKGFIASIRRDNLTFLG 185 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 E + + L++A + T + AL+ + RE F Sbjct: 186 NELIAISERRFTSKEQLQAAKRFT-----RLALKPYLGGKPLKSRELF 228 >gi|156932892|ref|YP_001436808.1| hypothetical protein ESA_00694 [Cronobacter sakazakii ATCC BAA-894] gi|166221891|sp|A7MH01|RECO_ENTS8 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|156531146|gb|ABU75972.1| hypothetical protein ESA_00694 [Cronobacter sakazakii ATCC BAA-894] Length = 245 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 77/237 (32%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E ++I+++ + + GR + + R + LQ + V Sbjct: 1 MEGWQ-RAFVLHARPWSETSLIIDLFSEESGRVRVVAKGARRKRSNLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A LS GL + R L EL+ Sbjct: 60 WSGRGDVKN---LTSAEAVSLALPLSGITLYSGLYVNELVARVLEPETRFSELFFDYLHC 116 Query: 118 LNCHKI-PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + EL LL ++G+G+D C TG D + Sbjct: 117 IQALAGASGSPEPALRRFELALLGHLGYGVDFLHCAGTGDEVDDAMTYRYREEKGFIASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + D D+L++A + T + AL+ + RE F Sbjct: 177 VIDNTSFTGRQLKALATREFPDVDTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|58697108|ref|ZP_00372549.1| DNA repair protein RecO [Wolbachia endosymbiont of Drosophila simulans] gi|58698226|ref|ZP_00373146.1| DNA repair protein RecO [Wolbachia endosymbiont of Drosophila ananassae] gi|225630040|ref|YP_002726831.1| DNA repair protein RecO [Wolbachia sp. wRi] gi|254790743|sp|C0R5J8|RECO_WOLWR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|58535253|gb|EAL59332.1| DNA repair protein RecO [Wolbachia endosymbiont of Drosophila ananassae] gi|58536603|gb|EAL59934.1| DNA repair protein RecO [Wolbachia endosymbiont of Drosophila simulans] gi|225592021|gb|ACN95040.1| DNA repair protein RecO [Wolbachia sp. wRi] Length = 240 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 78/242 (32%), Positives = 122/242 (50%), Gaps = 9/242 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ II+ + YG+KN+IL + T+ +G+ G + + + Q NL+ W + Sbjct: 1 MRWKDEGIIIAAKKYGDKNLILSLFTKNHGKRRGLTKLTNNSNYK--FQISNLLHAEWSA 58 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLN 119 +L +NLG F+ E++ES L + S + + LPE EPC LYD F++ Sbjct: 59 KLPENLGFFKCELIESSFHHFFQDRLKSITIVSFSSILEKVLPESEPCAVLYDNFRYFID 118 Query: 120 CHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 K + ++ +EL+LL +GF LDL+KC VTGV ++L ++SPK+G AV + G Sbjct: 119 VIKHNNQSWQSHYLNLELLLLTQLGFKLDLSKCAVTGVKENLQFISPKTGRAVSKKAGDY 178 Query: 179 YAEKMLVLPSFLWKEEQT-----IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 YA+K+L P L + ++T YFLNKY + LR L Sbjct: 179 YADKLLPFPQMLHDVYNNNLQNSYSFQEFQLGLKVTGYFLNKYLFLQLNVKFPELRNLML 238 Query: 234 GK 235 Sbjct: 239 SL 240 >gi|190149856|ref|YP_001968381.1| DNA repair protein RecO [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307263179|ref|ZP_07544800.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|238692329|sp|B3GX87|RECO_ACTP7 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|189914987|gb|ACE61239.1| DNA repair protein RecO [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306871541|gb|EFN03264.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 240 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 80/243 (32%), Gaps = 13/243 (5%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 W +L R Y E +++++ T ++GR + + R + +LQ + + W Sbjct: 4 NWH-RGFVLHRREYSETSLLVDFFTEEHGRITLLAKGARRPRSPLKAVLQPFTPLLLRWS 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + + + G L R L + EL+ + Sbjct: 63 GKGDLKTLTKAEP---ASLTLPMQTLALYSGFYVNEVLARVLENQTAYPELFQHYLQCMT 119 Query: 120 CHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 P I I E +LK +G+G++ + C TG + L Sbjct: 120 RLATQPEQIEPILRTFEFQMLKALGYGVNFSICAATGDPVSPSMTYQFKENEGFIASLLR 179 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 L +++ D +L++A + T + AL+ + RE F L Sbjct: 180 NNASFLGKDLLAFEQLDFSDKATLQAAKRFT-----RMALKPYLGSQPLKSRELFQSILP 234 Query: 238 ELI 240 + Sbjct: 235 NKL 237 >gi|218710567|ref|YP_002418188.1| DNA repair protein RecO [Vibrio splendidus LGP32] gi|254790741|sp|B7VK77|RECO_VIBSL RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|218323586|emb|CAV19825.1| DNA repair protein recO [Vibrio splendidus LGP32] Length = 242 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 74/232 (31%), Gaps = 11/232 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R + LQ + + W + Sbjct: 9 FVLHRRPYSESSLILDVFSEEYGRVTLMSKGARSKRSNLKGALQPFTPLLLKWSGNGS-- 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + L+ + + R L + L Sbjct: 67 -MKTLRQAEPISLGLPLAGINLYSAMYVNELVGRVLMAEVAMPAFFHDYLHALTELAHNE 125 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL +G+G+D C TG D + + Sbjct: 126 NPEPALRRFELALLSAMGYGVDFLHCAGTGEAIDPSMTYRYREQKGFIASVRRDNLTFMG 185 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKL 236 E + I + LK+A + T + AL+ + RE F+ + Sbjct: 186 DELIAISERRFITKEQLKAAKRFT-----RIALKPYLGGKPLKSRELFMPTI 232 >gi|303252177|ref|ZP_07338345.1| DNA repair protein RecO [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247517|ref|ZP_07529562.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302648960|gb|EFL79148.1| DNA repair protein RecO [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306856020|gb|EFM88178.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 240 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 80/243 (32%), Gaps = 13/243 (5%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 W +L R Y E +++++ T ++GR + + R + +LQ + + W Sbjct: 4 NWH-RGFVLHRREYSETSLLVDFFTEEHGRITLLAKGARRPRSPLKAVLQPFTPLLLRWS 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + + + G L R L + EL+ + Sbjct: 63 GKGDLKTLTKAEP---ASLTLPMQTLALYSGFYVNEVLARVLENQTAYPELFQHYLQCMT 119 Query: 120 CHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 P I I E +LK +G+G++ + C TG + L Sbjct: 120 RLATQPKQIEPILRTFEFQMLKALGYGVNFSICAATGDPVSPSMTYQFRENQGFIASLLQ 179 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 L +++ D +L++A + T + AL+ + RE F L Sbjct: 180 NNYTFLGKDLLAFEQLDFSDKATLQAAKRFT-----RIALKPYLGSQPLKSRELFQSVLP 234 Query: 238 ELI 240 + Sbjct: 235 NKL 237 >gi|42520114|ref|NP_966029.1| DNA repair protein RecO [Wolbachia endosymbiont of Drosophila melanogaster] gi|81652824|sp|Q73IE9|RECO_WOLPM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|42409851|gb|AAS13963.1| recO-related protein [Wolbachia endosymbiont of Drosophila melanogaster] Length = 240 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 79/242 (32%), Positives = 123/242 (50%), Gaps = 9/242 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ II+ + YG+KN+IL + T+ +G+ G + + + Q NL+ W + Sbjct: 1 MRWKDEGIIIAAKKYGDKNLILSLFTKNHGKRRGLTKLTNNSNYK--FQISNLLHAEWSA 58 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLN 119 +L +NLG + E++ES L + S + + LPE EPC LYD L F++ Sbjct: 59 KLPENLGFLKCELIESPFHHFFQDRLKSITIVSFSSILEKVLPESEPCAMLYDNLRYFID 118 Query: 120 CHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 K + ++ +EL+LL +GF LDL+KC VTGV ++L ++SPK+G AV + VG Sbjct: 119 VIKHNNQSWQSHYLNLELLLLTQLGFKLDLSKCAVTGVKENLQFISPKTGRAVSKKVGDY 178 Query: 179 YAEKMLVLPSFLWKEEQT-----IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 YA+K+L P L + ++T YFLNKY + LR L Sbjct: 179 YADKLLPFPQMLHDVYNNNLQNSYSFQEFQLGLKVTGYFLNKYLFLQLNVKFPELRNLML 238 Query: 234 GK 235 Sbjct: 239 SL 240 >gi|222475203|ref|YP_002563619.1| DNA repair protein RecO [Anaplasma marginale str. Florida] gi|254790506|sp|B9KIQ1|RECO_ANAMF RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|222419340|gb|ACM49363.1| DNA repair protein RecO [Anaplasma marginale str. Florida] Length = 238 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 75/242 (30%), Positives = 123/242 (50%), Gaps = 11/242 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ +++G R YG+++++L ++TR G G R + LQ G+L+ WR+ Sbjct: 1 MQWREMGVVMGTRPYGDEHLLLSILTRNRGLRRGLTRLTKKR----PLQIGDLIDATWRA 56 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 +L NLG F EV+ S + L L SI + LPE EP LYD F Sbjct: 57 KLPTNLGHFTCEVIASAFYSYFRDRIKLMCLSSITHIMSTALPENEPHPTLYDSFQDFAA 116 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + ++++EL++L +GF LDL+KC V+ +LL++SPK+G A+ +VG Y Sbjct: 117 AAEAEAPWYNHYLKLELLVLSQLGFALDLSKCAVSNSKDNLLFISPKTGRALSEAVGHAY 176 Query: 180 AEKMLVLPSFLWK-----EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 K+L LP L E + AD + ++ +FL+++ LQ + R+ G Sbjct: 177 RNKLLPLPKVLRSISCGVETECCSADEFALSLKILGFFLHRHLLQESH-TFQESRKILTG 235 Query: 235 KL 236 L Sbjct: 236 LL 237 >gi|37681013|ref|NP_935622.1| DNA repair protein RecO [Vibrio vulnificus YJ016] gi|42559437|sp|Q7MHP0|RECO_VIBVY RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|37199763|dbj|BAC95593.1| Recombinational DNA repair protein [Vibrio vulnificus YJ016] Length = 243 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 76/231 (32%), Gaps = 11/231 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + ++GR + +S R + LQ + + W + Sbjct: 11 FVLHRRPYSESSLILDVFSEEFGRITLMSKGARSKRSNLKGALQPFTPLLLKWSGKG--- 67 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + L+ L + R L + P L+ L Sbjct: 68 AMKTLRQAEPISLGLPLTGINLYSALYVNELIGRVLMQEVPMPGLFHDYLFALTELAQAD 127 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL +G+G+D C TG D + L Sbjct: 128 NPEPALRRFELALLAAMGYGVDFLHCAGTGEPIDPQMTYRYREQKGFIASVRRDNLTFLG 187 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 E + + + L++A + T + AL+ + RE F+ Sbjct: 188 NELIAISERRFLTKEQLQAAKRFT-----RIALKPYLGGKPLKSRELFIQM 233 >gi|99035892|ref|ZP_01314943.1| hypothetical protein Wendoof_01000221 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 240 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 79/242 (32%), Positives = 123/242 (50%), Gaps = 9/242 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ II+ + YG+KN+IL + T+ +G+ G + + + Q NL+ W + Sbjct: 1 MRWKDEGIIIAAKKYGDKNLILSLFTKNHGKRRGLTKLTNNSNYK--FQISNLLHAEWSA 58 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLN 119 +L +NLG F+ E++ES L + S + + LPE EPC LYD F++ Sbjct: 59 KLPENLGFFKCELIESPFHHFFQDRLKSITIVSFSSILEKVLPESEPCAMLYDNFRYFID 118 Query: 120 CHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 K + ++ +EL+LL +GF LDL+KC VTGV ++L ++SPK+G AV + VG Sbjct: 119 VIKHNNQSWQSHYLNLELLLLTQLGFKLDLSKCAVTGVKENLQFISPKTGRAVSKKVGDY 178 Query: 179 YAEKMLVLPSFLWKEEQT-----IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 YA+K+L P L + ++T YFLNKY + LR L Sbjct: 179 YADKLLPFPQMLHDVYNNNLQNSYSFQEFQLGLKVTGYFLNKYLFLQLNVKFPELRNLML 238 Query: 234 GK 235 Sbjct: 239 SL 240 >gi|323499983|ref|ZP_08104939.1| DNA repair protein RecO [Vibrio sinaloensis DSM 21326] gi|323314949|gb|EGA68004.1| DNA repair protein RecO [Vibrio sinaloensis DSM 21326] Length = 240 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 72/229 (31%), Gaps = 11/229 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + ++GR + +S R + LQ + + W + Sbjct: 10 FVLHRRPYSESSLILDVFSEEFGRVTLMSKGARSKRSNLKGALQPFTPLLLKWSGNGS-- 67 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + L + + R L P L+ L Sbjct: 68 -MKTLRQAEPISLGLPLFGINLYSAMYVNELVGRVLMAEVPMPALFHDYLHALTELAQSD 126 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL +G+G+D C TG D + Sbjct: 127 NPEPALRRFELALLSAMGYGVDFMHCAGTGEPVDPGMTYRYREQKGFIASVRRDNLTFYG 186 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFL 233 E + + LK+A + T + AL+ + RE FL Sbjct: 187 SELIAISERRFTTKEQLKAAKRFT-----RIALKPYLGGKPLKSRELFL 230 >gi|261253898|ref|ZP_05946471.1| DNA recombination and repair protein RecO [Vibrio orientalis CIP 102891] gi|260937289|gb|EEX93278.1| DNA recombination and repair protein RecO [Vibrio orientalis CIP 102891] Length = 255 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 74/232 (31%), Gaps = 11/232 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R + LQ + + W + Sbjct: 24 FVLHRRPYSESSLILDVFSEEYGRVTLMSKGARSKRSNLKGALQPFTPLLLKWSGNGS-- 81 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + L+ G+ + R L L+ L Sbjct: 82 -MKTLRQAEPISLGLPLTGINLYSGMYVNELIGRVLMAEVAMPALFHDYLHALTELAQAD 140 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL +G+G+D C +G D + Sbjct: 141 NPEPALRRFELALLSAMGYGVDFLHCAGSGEPIDPGMTYRYREQKGFIASVRHDNLTFRG 200 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKL 236 E + + LK+A + T + AL+ + RE F+ + Sbjct: 201 DELIAISERRFTTKEQLKAAKRFT-----RIALKPYLGGKPLKSRELFMSMI 247 >gi|260775206|ref|ZP_05884104.1| DNA recombination and repair protein RecO [Vibrio coralliilyticus ATCC BAA-450] gi|260608907|gb|EEX35069.1| DNA recombination and repair protein RecO [Vibrio coralliilyticus ATCC BAA-450] Length = 242 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 40/232 (17%), Positives = 75/232 (32%), Gaps = 11/232 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + ++GR + +S R + LQ + + W + + Sbjct: 10 FVLHRRPYSESSLILDVFSEEFGRVTLMSKGARSKRSNLKGALQPFTPLLLKWSGKGS-- 67 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + L+ + + R L L+ L Sbjct: 68 -MKTLRQAEPISLGLPLTGINLYSAMYVNELIGRVLMAEVSMPALFHDYLHALTELAQCE 126 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL +G+G+D C TG + + + Sbjct: 127 NPEPALRRFELALLSAMGYGVDFLHCAGTGEPIEPEMTYRYREQKGFIASVRRDNLTFVG 186 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKL 236 E + + LK+A + T + AL+ + RE F+ L Sbjct: 187 NELIAISERRFTTKEQLKAAKRFT-----RIALKPYLGGKPLKSRELFMQIL 233 >gi|254360746|ref|ZP_04976894.1| DNA recombination protein RecO [Mannheimia haemolytica PHL213] gi|153091316|gb|EDN73290.1| DNA recombination protein RecO [Mannheimia haemolytica PHL213] Length = 240 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 80/242 (33%), Gaps = 12/242 (4%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 WQ A +L R Y E ++++E T +GR + + R + +LQ + + W Sbjct: 5 QWQ-RAFVLHRREYSENSLLVEFFTEHHGRITLLAKGARRARSPLKAVLQPFTPLLLRWS 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + + + G L R L + EL+ + Sbjct: 64 GKGDLKTLTKAEP---AALTLPMETLSLYSGFYINEVLARVLENQTAYPELFQHYLRCIT 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 I I E LK +G+G+D T C TG+ D + L Sbjct: 121 ELATQKQIEPILRTFEFHTLKALGYGVDFTHCAATGLPVDPKMTYQFQENQGFIASLLQN 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLLE 238 + L + + + + ++A + T + AL+ + RE F L Sbjct: 181 NQSFLGSDLLAFAQLDFSEKSTQQAAKRFT-----RMALKPYLGSQPLKSRELFQSILPN 235 Query: 239 LI 240 + Sbjct: 236 KL 237 >gi|303251582|ref|ZP_07337756.1| DNA repair protein RecO [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307245402|ref|ZP_07527490.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307249748|ref|ZP_07531727.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307252105|ref|ZP_07534004.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307254357|ref|ZP_07536195.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307256564|ref|ZP_07538345.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307258815|ref|ZP_07540547.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|302649580|gb|EFL79762.1| DNA repair protein RecO [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306853743|gb|EFM85960.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306858256|gb|EFM90333.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306860405|gb|EFM92419.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306862656|gb|EFM94612.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306864974|gb|EFM96876.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306867166|gb|EFM99022.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 240 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 80/243 (32%), Gaps = 13/243 (5%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 W +L R Y E +++++ T ++GR + + R + +LQ + + W Sbjct: 4 NWH-RGFVLHRREYSETSLLVDFFTEEHGRITLLAKGARRPRSPLKAVLQPFTPLLLRWS 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + + + G L R L + EL+ + Sbjct: 63 GKGDLKTLTKAEP---ASLTLPMQTLALYSGFYVNEVLARVLENQTAYPELFQHYLQCMT 119 Query: 120 CHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 P I I E +LK +G+G++ + C TG + L Sbjct: 120 RLATQPKQIEPILRTFEFQMLKALGYGVNFSICAATGDPVSPSMTYQFRENQGFIASLLQ 179 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 L +++ D +L++A + T + AL+ + RE F L Sbjct: 180 NNYTFLGKDLLAFEQLDFSDKATLQAAKRFT-----RMALKPYLGSQPLKSRELFQSILP 234 Query: 238 ELI 240 + Sbjct: 235 NKL 237 >gi|237732551|ref|ZP_04563032.1| DNA repair protein recO [Citrobacter sp. 30_2] gi|226908090|gb|EEH94008.1| DNA repair protein recO [Citrobacter sp. 30_2] Length = 236 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 81/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLVLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL + R L L+ Sbjct: 60 FGGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELISRVLEYETRFSALFFDYLNC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + EL LL ++G+G+D T C +G D + Sbjct: 117 IQALAGATGSPEPALRRFELALLGHLGYGVDFTHCAGSGEPVDDTMTYRYREEKGFIASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + DAD+L++A + T + AL+ + RE F Sbjct: 177 VIDNATFTGRHLKALESREFPDADTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|172045973|sp|A4WDD6|RECO_ENT38 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 235 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 80/237 (33%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + V Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL + R L EL+ Sbjct: 60 FGGRGEVKTLR---SAEAVSLALPLSGITLYSGLYVNELISRVLEHETRFSELFFDYLHC 116 Query: 118 LNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + EL LL ++G+G+D C +G + D + Sbjct: 117 IQALAGATDSPEPALRRFELALLGHLGYGVDFLHCAGSGDSVDDTMTYRYREEKGFIASI 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + E + D D+L++A + T + AL+ + RE F Sbjct: 177 VIDNTTFTGRHLRALSEREFPDQDTLRAAKRFT-----RIALKPYLGGKPLKSRELF 228 >gi|46143334|ref|ZP_00135440.2| COG1381: Recombinational DNA repair protein (RecF pathway) [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208027|ref|YP_001053252.1| DNA repair protein RecO [Actinobacillus pleuropneumoniae L20] gi|166221881|sp|A3MZR1|RECO_ACTP2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|126096819|gb|ABN73647.1| DNA repair protein RecO [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 240 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 80/243 (32%), Gaps = 13/243 (5%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 W +L R Y E +++++ T ++GR + + R + +LQ + + W Sbjct: 4 NWH-RGFVLHRREYSETSLLVDFFTEEHGRVTLLAKGARRPRSPLKAVLQPFTPLLLRWS 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + + + G L R L + EL+ + Sbjct: 63 GKGDLKTLTKAEP---ASLTLPMQTLALYSGFYVNEVLARVLENQTAYPELFQHYLQCMT 119 Query: 120 CHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 P I I E +LK +G+G++ + C TG + L Sbjct: 120 RLATQPKQIEPILRTFEFQMLKALGYGVNFSICAATGDPVSPSMTYQFRENQGFIASLLQ 179 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 L +++ D +L++A + T + AL+ + RE F L Sbjct: 180 NNYTFLGKDLLAFEQLNFSDKATLQAAKRFT-----RMALKPYLGSQPLKSRELFQSILP 234 Query: 238 ELI 240 + Sbjct: 235 NKL 237 >gi|168821431|ref|ZP_02833431.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205342020|gb|EDZ28784.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320087080|emb|CBY96849.1| DNA repair protein recO Recombination protein O [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 242 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 81/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 YSGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLNC 116 Query: 118 LNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGERVDDTMTYRYREEKGFFASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + +E + D D+L++A + T + AL+ + RE F Sbjct: 177 VIDNNTFTGRHLKALEEREFPDVDTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|168238324|ref|ZP_02663382.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194738093|ref|YP_002115642.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|238693669|sp|B4TS12|RECO_SALSV RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|194713595|gb|ACF92816.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288836|gb|EDY28209.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|322613349|gb|EFY10291.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620447|gb|EFY17312.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625085|gb|EFY21914.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629471|gb|EFY26247.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633858|gb|EFY30597.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635464|gb|EFY32175.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639860|gb|EFY36539.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644254|gb|EFY40798.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649946|gb|EFY46366.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654871|gb|EFY51188.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658201|gb|EFY54467.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322661727|gb|EFY57945.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669708|gb|EFY65854.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673285|gb|EFY69390.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322674926|gb|EFY71013.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682949|gb|EFY78967.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685610|gb|EFY81605.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323191962|gb|EFZ77200.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200405|gb|EFZ85486.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201305|gb|EFZ86372.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208375|gb|EFZ93315.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211549|gb|EFZ96387.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215981|gb|EGA00713.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221762|gb|EGA06170.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225630|gb|EGA09857.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229348|gb|EGA13472.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235337|gb|EGA19421.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237477|gb|EGA21540.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245232|gb|EGA29233.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248806|gb|EGA32733.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254014|gb|EGA37835.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323259062|gb|EGA42710.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323267768|gb|EGA51249.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269673|gb|EGA53125.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 242 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 79/237 (33%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 YSGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLNC 116 Query: 118 LNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGERVDDTMTYRYREEKGFFASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + D D+L++A + T + AL+ + RE F Sbjct: 177 VIDNNTFTGRHLKALDAREFPDVDTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|56416838|ref|YP_153912.1| DNA repair protein RecO [Anaplasma marginale str. St. Maries] gi|81599148|sp|Q5PAM3|RECO_ANAMM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|56388070|gb|AAV86657.1| hypothetical protein AM680 [Anaplasma marginale str. St. Maries] Length = 238 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 75/242 (30%), Positives = 123/242 (50%), Gaps = 11/242 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ +++G R YG+++++L ++TR G G R + LQ G+L+ WR+ Sbjct: 1 MQWREMGVVMGTRPYGDEHLLLSILTRNRGLRRGLTRFTKKR----PLQIGDLIDATWRA 56 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 +L NLG F EV+ S + L L SI + LPE EP LYD F Sbjct: 57 KLPTNLGHFTCEVIASAFYSYFRDRIKLMCLSSITHIMSTALPENEPHPTLYDSFQDFAA 116 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + ++++EL++L +GF LDL+KC V+ +LL++SPK+G A+ +VG Y Sbjct: 117 AAEAEAPWYNHYLKLELLVLSQLGFALDLSKCAVSNSKDNLLFISPKTGRALSEAVGCAY 176 Query: 180 AEKMLVLPSFLWK-----EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 +K+L LP L E + AD + ++ +FL ++ LQ + R+ G Sbjct: 177 RDKLLPLPKVLRSISCGVETECCSADEFALSLRILGFFLRRHLLQESH-TFQESRKILTG 235 Query: 235 KL 236 L Sbjct: 236 LL 237 >gi|270265298|ref|ZP_06193559.1| hypothetical protein SOD_m00300 [Serratia odorifera 4Rx13] gi|270040702|gb|EFA13805.1| hypothetical protein SOD_m00300 [Serratia odorifera 4Rx13] Length = 243 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 80/238 (33%), Gaps = 12/238 (5%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRL 62 + A +L R Y E +++L++ T +GR + +S R + LQ + V W R Sbjct: 5 ERAFVLHGRPYSETSLMLDMFTEGHGRVRLLAKGARSRRSNLKGCLQPFTPLLVRWGGRG 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH- 121 LS + GL L R L + L+ L Sbjct: 65 EVKTLRNAEA---VSLGLPLSGMMLYSGLYVNELLSRVLEQEANYSVLFFDYLQCLQALA 121 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 + Q EL LL ++G+GLD C +G D + + Sbjct: 122 AEDISPEQALRQFELALLNHLGYGLDFLHCAGSGQPVDDGMTYRYREEKGFIASLVVDHY 181 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLLE 238 E Q DA +L++A + T + AL+ + RE F + + Sbjct: 182 SFTGRELRALAERQFPDAQTLRAAKRFT-----RMALKPYLGGKPLKSRELFRQFVRK 234 >gi|85059763|ref|YP_455465.1| DNA repair protein RecO [Sodalis glossinidius str. 'morsitans'] gi|119361486|sp|Q2NS15|RECO_SODGM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|84780283|dbj|BAE75060.1| DNA repair protein RecO [Sodalis glossinidius str. 'morsitans'] Length = 260 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 77/234 (32%), Gaps = 13/234 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L+ T Q GR + +S R + +LQ + W Sbjct: 4 WQ-RAFVLHARPYSETSLLLDFFTEQQGRVRVLAKGARSRRSALKGVLQPFTPLLARWSG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R LS + GL L R L +L+ L Sbjct: 63 RGEVKTLRSAEP---VSLGLPLSGLMLYSGLYINELLSRVLDHETDYSKLFYDYLHCLQW 119 Query: 121 HKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + EL LL ++G+G+D C +G D + L Sbjct: 120 LAGATGSPEPALRRFELALLSHLGYGVDFLHCAGSGEPVDDAMTYRYREEKGFTASVLLD 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 E + D D+L++A + T + AL+ + E F Sbjct: 180 RYSFSGRELRALAEGEFPDIDTLRAAKRFT-----RMALKPYLGGKPLKSHELF 228 >gi|190570798|ref|YP_001975156.1| recO-related protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019675|ref|ZP_03335480.1| recO-related protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|254790742|sp|B3CPG9|RECO_WOLPP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|190357070|emb|CAQ54467.1| recO-related protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212994716|gb|EEB55359.1| recO-related protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 242 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 78/241 (32%), Positives = 122/241 (50%), Gaps = 9/241 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+D+ +I+ V+ YG+KN+IL + T+ +G+ G R + + Q NL+ W + Sbjct: 1 MRWKDEGVIIAVKKYGDKNLILSLFTKNHGKCRGLTRLTNNSNYK--FQISNLLHAEWSA 58 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIFLN 119 +L +NLG + E++ES L + S + + LPE E C++LYD F++ Sbjct: 59 KLPENLGFLKCELIESPFHHFFQDRLKSIAIVSFSSILEKVLPESESCIKLYDNFRHFID 118 Query: 120 CHKIP-SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 K ++ +EL+LL +GF LDL+KC VTGV ++L ++SPK+G AV + VG Sbjct: 119 VIKHNSQFWQSHYLNLELLLLTQLGFKLDLSKCAVTGVKENLQFISPKTGRAVSKKVGDC 178 Query: 179 YAEKMLVLPSFLWKEEQT-----IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 YA+K+L P L + ++T YFLNKY LR L Sbjct: 179 YADKLLPFPQMLHDVYNNNLQNSYSYQEFRLGLKITGYFLNKYLFLQLNAKFPELRNFML 238 Query: 234 G 234 Sbjct: 239 S 239 >gi|198245563|ref|YP_002216646.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|238690360|sp|B5FRC3|RECO_SALDC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|197940079|gb|ACH77412.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326624401|gb|EGE30746.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 242 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 82/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + +LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGVLQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 YSGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLNC 116 Query: 118 LNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGERVDDTMTYRYREEKGFFASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + +E + D D+L++A + T + AL+ + RE F Sbjct: 177 VIDNNTFTGRHLKALEEREFPDVDTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|27364936|ref|NP_760464.1| DNA repair protein RecO [Vibrio vulnificus CMCP6] gi|31340326|sp|Q8DC74|RECO_VIBVU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|27361082|gb|AAO09991.1| DNA repair protein RecO [Vibrio vulnificus CMCP6] Length = 243 Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 75/231 (32%), Gaps = 11/231 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL++ + ++GR + +S R + LQ + + W + Sbjct: 11 FVLHRRPYSESSLILDIFSEEFGRITLMSKGARSKRSNLKGALQPFTPLLLKWSGKG--- 67 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + L+ L + R L + L+ L Sbjct: 68 AMKTLRQAEPISLGLPLTGINLYSALYVNELIGRVLMQEVSMPGLFHDYLFALTELAQAD 127 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL +G+G+D C TG D + L Sbjct: 128 NPEPALRRFELALLAAMGYGVDFLHCAGTGEPIDPQMTYRYREQKGFIASVRRDNLTFLG 187 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 E + + + L++A + T + AL+ + RE F+ Sbjct: 188 NELIAISERRFLTKEQLQAAKRFT-----RIALKPYLGGKPLKSRELFIQM 233 >gi|322514174|ref|ZP_08067239.1| recombination protein O [Actinobacillus ureae ATCC 25976] gi|322119960|gb|EFX91962.1| recombination protein O [Actinobacillus ureae ATCC 25976] Length = 240 Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 37/243 (15%), Positives = 74/243 (30%), Gaps = 13/243 (5%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 W +L R Y E +++++ T +GR + + R + +LQ + + W Sbjct: 4 NWH-RGFVLHRREYSETSLLVDFFTEDHGRITLLAKGARRPRSSLKAVLQPFTPLLLRWS 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + + + G L + L + L+ + Sbjct: 63 GKGELKTLTKAEP---ASLTLPMQTLALYSGFYVNEVLAKVLENQTAYPALFQHYLQCVT 119 Query: 120 CHKIPSVI-GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 I E LK +G+G++ C TG + L Sbjct: 120 HLATQPDNLEAILRTFEFHTLKALGYGVNFGVCAATGDPVSPSMTYQFKENQGFIASLLQ 179 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 L +++ D +L++A + T + AL+ + RE F L Sbjct: 180 NNASFLGKDLLAFEQLDFSDKATLQAAKRFT-----RIALKPYLGSQPLKSRELFQSILP 234 Query: 238 ELI 240 + Sbjct: 235 NKL 237 >gi|146312693|ref|YP_001177767.1| DNA repair protein RecO [Enterobacter sp. 638] gi|145319569|gb|ABP61716.1| DNA replication and repair protein RecO [Enterobacter sp. 638] Length = 236 Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 80/237 (33%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + V Sbjct: 2 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLVR 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL + R L EL+ Sbjct: 61 FGGRGEVKTLR---SAEAVSLALPLSGITLYSGLYVNELISRVLEHETRFSELFFDYLHC 117 Query: 118 LNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + EL LL ++G+G+D C +G + D + Sbjct: 118 IQALAGATDSPEPALRRFELALLGHLGYGVDFLHCAGSGDSVDDTMTYRYREEKGFIASI 177 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + E + D D+L++A + T + AL+ + RE F Sbjct: 178 VIDNTTFTGRHLRALSEREFPDQDTLRAAKRFT-----RIALKPYLGGKPLKSRELF 229 >gi|269958745|ref|YP_003328532.1| DNA repair protein RecO [Anaplasma centrale str. Israel] gi|269848574|gb|ACZ49218.1| DNA repair protein RecO [Anaplasma centrale str. Israel] Length = 238 Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 75/242 (30%), Positives = 125/242 (51%), Gaps = 11/242 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W++ +++G R YG+++++L ++TR G G R + LQ G+L+ WR+ Sbjct: 1 MQWREMGVVMGTRPYGDEHLLLSILTRNRGLRRGLTRFTKKR----PLQIGDLIDATWRA 56 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLN 119 +L NLG F +EV+ S + L L SI + LPE EP LYD F Sbjct: 57 KLPTNLGHFTYEVITSAFYSYFRDRIKLMCLSSITHIMSTALPENEPHPTLYDSFQDFAA 116 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + ++++EL++L +GF LDL+KC V+ +LL++SPK+G A+ +VG Y Sbjct: 117 AAEAEAPWYNHYLKLELLVLSQLGFALDLSKCAVSNSKDNLLFISPKTGRALSEAVGCAY 176 Query: 180 AEKMLVLPSFLWK-----EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 +K+L LP L E + AD + ++ +FL+++ LQ + R+ G Sbjct: 177 RDKLLPLPKVLRSISCGVETECCSADEFALSLKILGFFLHRHLLQESH-TFQESRKILTG 235 Query: 235 KL 236 L Sbjct: 236 LL 237 >gi|165975964|ref|YP_001651557.1| DNA repair protein RecO [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|238687534|sp|B0BUA8|RECO_ACTPJ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|165876065|gb|ABY69113.1| DNA repair protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 240 Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 79/243 (32%), Gaps = 13/243 (5%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 W +L R Y E +++++ T ++GR + + + +LQ + + W Sbjct: 4 NWH-RGFVLHRREYSETSLLVDFFTEEHGRITLLAKGARRPHSPLKAVLQPFTPLLLRWS 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + + + G L R L + EL+ + Sbjct: 63 GKGDLKTLTKAEP---ASLTLPMQTLALYSGFYVNEVLARVLENQTAYPELFQHYLQCMT 119 Query: 120 CHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 P I I E +LK +G+G++ + C TG + L Sbjct: 120 RLATQPEQIEPILRTFEFQMLKALGYGVNFSICAATGDPVSPSMTYQFRENQGFIASLLQ 179 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 L +++ D +L++A + T + AL+ + RE F L Sbjct: 180 NNYTFLGKDLLAFEQLDFSDKATLQAAKRFT-----RMALKPYLGSQPLKSRELFQNILP 234 Query: 238 ELI 240 + Sbjct: 235 NKL 237 >gi|269101848|ref|ZP_06154545.1| DNA recombination and repair protein RecO [Photobacterium damselae subsp. damselae CIP 102761] gi|268161746|gb|EEZ40242.1| DNA recombination and repair protein RecO [Photobacterium damselae subsp. damselae CIP 102761] Length = 236 Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 74/236 (31%), Gaps = 11/236 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNW 58 M +L R Y E ++IL+V + GR + + R + LQ + + W Sbjct: 1 MEGLQRCFVLHSRPYSETSLILDVFSEDSGRLSILSKGARRKRSNLKGALQPFTPLFMKW 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + + + S + + L R L + P L+ L Sbjct: 61 SGKGS---MPVLTHAEPISIGLPMRSYILYSAMYVNEVLCRVLEAQTPYPVLFLDYLNVL 117 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + EL LL+++G+G+D C +G+ + + Sbjct: 118 RELAQADNPEPALRRFELALLQHLGYGIDFLHCAGSGLPVEDNMTYNYREQQGFIASIKM 177 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFL 233 + + L++A + T + AL+ + RE F+ Sbjct: 178 GQLTFTGEQLKAIDARRFETPEQLRAAKRFT-----RIALKPYLGSKPLKSRELFI 228 >gi|1228148|gb|AAA92442.1| RecO [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 241 Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 80/237 (33%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 YSGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLNC 116 Query: 118 LNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGERVDDTMTYRYREEKGFFASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + D D+L++A + T + AL+ + RE F Sbjct: 177 VIDNNTFTGRHLKALEAREFPDVDTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|16761491|ref|NP_457108.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765899|ref|NP_461514.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29140812|ref|NP_804154.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56412545|ref|YP_149620.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62181144|ref|YP_217561.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161612651|ref|YP_001586616.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167549389|ref|ZP_02343148.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992710|ref|ZP_02573806.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168243369|ref|ZP_02668301.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194446629|ref|YP_002041842.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194451401|ref|YP_002046641.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197248854|ref|YP_002147537.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265533|ref|ZP_03165607.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197361480|ref|YP_002141116.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|204929727|ref|ZP_03220801.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|213425278|ref|ZP_03358028.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213583125|ref|ZP_03364951.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213646355|ref|ZP_03376408.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|224582879|ref|YP_002636677.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238912697|ref|ZP_04656534.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289804219|ref|ZP_06534848.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289825503|ref|ZP_06544710.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|61230222|sp|P0A285|RECO_SALTY RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|61230223|sp|P0A286|RECO_SALTI RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|62287383|sp|Q5PIG3|RECO_SALPA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|75481600|sp|Q57LD2|RECO_SALCH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|189039772|sp|A9N1T3|RECO_SALPB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238689917|sp|B5BAT2|RECO_SALPK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238690022|sp|B5F1F9|RECO_SALA4 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238690622|sp|B4TE13|RECO_SALHS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238693589|sp|B4T1F6|RECO_SALNS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|25300564|pir||AI0828 DNA repair protein RecO [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16421126|gb|AAL21473.1| gap repair gene [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16503791|emb|CAD02781.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi] gi|29136437|gb|AAO68003.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56126802|gb|AAV76308.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62128777|gb|AAX66480.1| gap repair gene [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161362015|gb|ABX65783.1| hypothetical protein SPAB_00347 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194405292|gb|ACF65514.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194409705|gb|ACF69924.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197092956|emb|CAR58386.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197212557|gb|ACH49954.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243788|gb|EDY26408.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|204321446|gb|EDZ06646.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205325288|gb|EDZ13127.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329107|gb|EDZ15871.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205337667|gb|EDZ24431.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|224467406|gb|ACN45236.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261247774|emb|CBG25602.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994705|gb|ACY89590.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159127|emb|CBW18641.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913568|dbj|BAJ37542.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321222716|gb|EFX47787.1| DNA recombination and repair protein RecO [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322715634|gb|EFZ07205.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323130910|gb|ADX18340.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332989506|gb|AEF08489.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 242 Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 80/237 (33%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 YSGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLNC 116 Query: 118 LNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGERVDDTMTYRYREEKGFFASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + D D+L++A + T + AL+ + RE F Sbjct: 177 VIDNNTFTGRHLKALEAREFPDVDTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|293394831|ref|ZP_06639121.1| recombination protein O [Serratia odorifera DSM 4582] gi|291422582|gb|EFE95821.1| recombination protein O [Serratia odorifera DSM 4582] Length = 243 Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 83/243 (34%), Gaps = 14/243 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ T +GR + +S R + LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLMLDLFTEGHGRVRLLAKGARSRRSNLKGCLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R LS + GL L R L + L+ Sbjct: 60 WGGRGDIKTLRNAEA---VSLGLPLSGMMLYSGLYVNELLSRVLEQEADYSLLFFDYLQC 116 Query: 118 LNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + Q EL LL ++G+G+D C +G D + Sbjct: 117 LQALAAAERSPEQALRQFELALLHHLGYGVDFLHCAGSGEPVDDGMTYRYREEKGFIASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 + E Q DAD+L++A + T + AL+ + RE F Sbjct: 177 VVDHYSFTGRELRALAERQFPDADTLRAAKRFT-----RMALKPYLGGKPLKSRELFRQF 231 Query: 236 LLE 238 + + Sbjct: 232 VRK 234 >gi|207857986|ref|YP_002244637.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238690389|sp|B5QTU6|RECO_SALEP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|206709789|emb|CAR34141.1| DNA repair protein recO [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 242 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 81/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 YSGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLNC 116 Query: 118 LNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGERVDDTMTYRYREEKGFFASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + +E + D D+L++A + T + AL+ + RE F Sbjct: 177 VIDNNTFTGRHLKALEEREFPDVDTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|168466660|ref|ZP_02700514.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195630758|gb|EDX49350.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 242 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 80/237 (33%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 YSGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLNC 116 Query: 118 LNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGKRVDDTMTYRYREEKGFFASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + D D+L++A + T + AL+ + RE F Sbjct: 177 VIDNNTFTGRHLKALEAREFPDVDTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|323941172|gb|EGB37357.1| recombination protein O [Escherichia coli E482] Length = 242 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 82/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 FGGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHC 116 Query: 118 LNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + EL LL ++G+GL+ T C +G D + Sbjct: 117 IQSLAGVTGTPEPALRRFELALLGHLGYGLNFTHCAGSGEPVDDTMTYRYREEKGFIASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + DAD+L++A + T + AL+ + RE F Sbjct: 177 VIDNKTFTGRQLKALNAREFPDADTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|168232157|ref|ZP_02657215.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194469835|ref|ZP_03075819.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194456199|gb|EDX45038.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205333544|gb|EDZ20308.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 242 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 81/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 YSGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLNC 116 Query: 118 LNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + EL LL ++G+G++ T+C +G D + Sbjct: 117 IQALAGTTGSPEPALRRFELALLGHLGYGVNFTRCAGSGERVDDTMTYRYREEKGFFASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + D D+L++A + T + AL+ + RE F Sbjct: 177 VIDNNTFTGRHLKALEAREFPDVDTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|157371902|ref|YP_001479891.1| DNA repair protein RecO [Serratia proteamaculans 568] gi|166918732|sp|A8GI23|RECO_SERP5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|157323666|gb|ABV42763.1| DNA repair protein RecO [Serratia proteamaculans 568] Length = 243 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 80/238 (33%), Gaps = 12/238 (5%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRL 62 + A +L R Y E +++L++ T +GR + +S R + LQ + V W R Sbjct: 5 ERAFVLHGRPYSETSLMLDMFTEGHGRVRLLAKGARSRRSNLKGCLQPFTPLLVRWGGRG 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH- 121 LS + GL L R L + L+ L Sbjct: 65 EVKTLR---SAEAVSLGLPLSGMMLYSGLYVNELLSRVLEQEANYSVLFFDYLQCLQALA 121 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 + Q EL LL ++G+GLD C +G+ D + + Sbjct: 122 AEDVSPEQALRQFELALLNHLGYGLDFLHCAGSGLPVDDGMTYRYREEKGFIASLVVDHY 181 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLLE 238 E Q D +L++A + T + AL+ + RE F + + Sbjct: 182 SFTGRELRALAERQFPDVQTLRAAKRFT-----RMALKPYLGGKPLKSRELFRQFVRK 234 >gi|329890071|ref|ZP_08268414.1| recombinational DNA repair protein RecF pathway [Brevundimonas diminuta ATCC 11568] gi|328845372|gb|EGF94936.1| recombinational DNA repair protein RecF pathway [Brevundimonas diminuta ATCC 11568] Length = 200 Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 101/197 (51%), Gaps = 1/197 (0%) Query: 44 MQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LP 102 M+P LQ G V + RSR + LG R E + A L L L GL + + + LP Sbjct: 1 MRPFLQPGARVVADLRSRTSDQLGSARLEPVGEGPAALFDDPLALTGLSAAAAVAQGALP 60 Query: 103 EREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLW 162 EREP + + +P V IFV+ E LL+++GFGLDL++C TG DL+W Sbjct: 61 EREPHPGAFYAFEALMGAFAVPEVWPAIFVRFEAGLLEDLGFGLDLSRCASTGSMDDLVW 120 Query: 163 VSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNI 222 VSP++G AV R G PYA+K+L LP F+ + + +K+ +LT +FL ++ Sbjct: 121 VSPRTGRAVSREAGAPYADKLLALPPFMLGAQAGLGEGDVKAGLELTGHFLEQFVFHALN 180 Query: 223 IHCHLLRENFLGKLLEL 239 R + KL E Sbjct: 181 RPLPPARVWMIDKLGEA 197 >gi|283786181|ref|YP_003366046.1| DNA repair protein [Citrobacter rodentium ICC168] gi|282949635|emb|CBG89254.1| DNA repair protein [Citrobacter rodentium ICC168] Length = 236 Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 79/234 (33%), Gaps = 13/234 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 WQ A +L R + E +++L+V T + GR + +S R + LQ + V + Sbjct: 4 WQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLVRFGG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R A LS GL L R L L+ + Sbjct: 63 RGEVKTLRNAEA---VSLALPLSGITLYSGLYVNELLARVLEHETRFSALFFDYLHCIQA 119 Query: 121 HK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + + EL LL ++G+G+D C +G D + + Sbjct: 120 LAGVSGTPEPVLRRFELALLGHLGYGVDFLHCAGSGEPVDDTMTYRYREEKGFIASVVID 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 E DAD+L++A + T + AL+ + RE F Sbjct: 180 NSTFTGRELRALAERDFPDADTLRAAKRFT-----RIALKPYLGGKPLKSRELF 228 >gi|168261370|ref|ZP_02683343.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|200388266|ref|ZP_03214878.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199605364|gb|EDZ03909.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205349603|gb|EDZ36234.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 242 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 80/237 (33%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 YSGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLNC 116 Query: 118 LNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGERVDDTMTYRYREEKGFFASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + D D+L++A + T + AL+ + RE F Sbjct: 177 VIDNNTFTGRHLKALEAREFPDVDTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|33152640|ref|NP_873993.1| DNA repair protein RecO [Haemophilus ducreyi 35000HP] gi|42559454|sp|Q7VL77|RECO_HAEDU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|33148864|gb|AAP96382.1| DNA repair protein RecO [Haemophilus ducreyi 35000HP] Length = 240 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 83/240 (34%), Gaps = 15/240 (6%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 WQ +L R Y E +++++ T Q+GR + + R + +LQ + + W Sbjct: 4 QWQ-RGFVLHRREYRETSLLVDFFTEQHGRITLLAKGAKRVRSPLKAVLQPFTPLLLRWS 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + + + + GL L R L + L+ + Sbjct: 63 GKGDLKVLTKAEP---AALTLPMHHTALYSGLYVNEILIRVLENQTAYTALFQHYLQCIT 119 Query: 120 CHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 ++ ++ E LLK +G+G++ + C TG D S L Sbjct: 120 QLATQPEKLQVTLRTFEFHLLKALGYGVNFSICAATGQPIDAGMYYQFSE-NKGFFASLL 178 Query: 179 YAEKMLVLPSFLW-KEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKL 236 L ++ D D+L++A + T + AL+ + RE F L Sbjct: 179 RNHYTFCGKDLLAFEKGDFSDTDTLQAAKRFT-----RIALRPYLGSQPLKSRELFQAIL 233 >gi|206576021|ref|YP_002237092.1| DNA repair protein RecO [Klebsiella pneumoniae 342] gi|288934054|ref|YP_003438113.1| DNA repair protein RecO [Klebsiella variicola At-22] gi|290508250|ref|ZP_06547621.1| DNA repair protein RecO [Klebsiella sp. 1_1_55] gi|238058670|sp|B5XNH2|RECO_KLEP3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|206565079|gb|ACI06855.1| DNA repair protein RecO [Klebsiella pneumoniae 342] gi|288888783|gb|ADC57101.1| DNA repair protein RecO [Klebsiella variicola At-22] gi|289777644|gb|EFD85641.1| DNA repair protein RecO [Klebsiella sp. 1_1_55] Length = 245 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 77/234 (32%), Gaps = 13/234 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 WQ A +L R + E +++L+V T + GR + +S R + LQ + V + Sbjct: 4 WQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLVRFGG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R A LS GL + R L EL+ + Sbjct: 63 RGEVKTLR---SAEAVSLALPLSGITLYSGLYVNELISRVLEHETRFSELFFDYLHCIQA 119 Query: 121 HK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + EL LL ++G+G+D C +G D + + Sbjct: 120 LAGTSGSPEPALRRFELALLGHLGYGVDFLHCAGSGEPVDDTMTYRYREEKGFIASLVID 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + D D+L++A + T + AL+ + RE F Sbjct: 180 NNTFTGHHLKALASREFPDVDTLRAAKRFT-----RIALKPYLGGKPLKSRELF 228 >gi|291085017|ref|ZP_06351784.2| DNA repair protein RecO [Citrobacter youngae ATCC 29220] gi|291071662|gb|EFE09771.1| DNA repair protein RecO [Citrobacter youngae ATCC 29220] Length = 237 Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 79/237 (33%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 2 MEGWQ-RAFVLHSRPWSETSLVLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLR 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL + R L EL+ Sbjct: 61 FGGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELISRVLEYETRFSELFFDYLNC 117 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + EL LL ++G+G+D C +G D + Sbjct: 118 IQALAGATGSPEPALRRFELALLGHLGYGVDFLHCAGSGDEVDDTMTYRYREEKGFIASV 177 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + D D+L++A + T + AL+ + RE F Sbjct: 178 VIDNNTFTGHQLKALANREFPDVDTLRAAKRFT-----RMALKPYLGGKPLKSRELF 229 >gi|152971421|ref|YP_001336530.1| DNA repair protein RecO [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238896016|ref|YP_002920752.1| DNA repair protein RecO [Klebsiella pneumoniae NTUH-K2044] gi|166221895|sp|A6TCH9|RECO_KLEP7 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|150956270|gb|ABR78300.1| DNA repair protein RecO [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238548334|dbj|BAH64685.1| DNA repair protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 245 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 77/234 (32%), Gaps = 13/234 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 WQ A +L R + E +++L+V T + GR + +S R + LQ + V + Sbjct: 4 WQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLVRFGG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R A LS GL + R L EL+ + Sbjct: 63 RGEVKTLR---SAEAVSLALPLSGITLYSGLYVNELISRVLEHETRFSELFFDYLHCIQA 119 Query: 121 HK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + EL LL ++G+G+D C +G D + + Sbjct: 120 LAGASGSPEPALRRFELALLGHLGYGVDFLHCAGSGEPVDDTMTYRYREEKGFIASLVID 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + D D+L++A + T + AL+ + RE F Sbjct: 180 NNTFTGHHLKALASREFPDVDTLRAAKRFT-----RIALKPYLGGKPLKSRELF 228 >gi|148260213|ref|YP_001234340.1| DNA repair protein RecO [Acidiphilium cryptum JF-5] gi|254790500|sp|A5FXT9|RECO_ACICJ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|146401894|gb|ABQ30421.1| DNA repair protein RecO [Acidiphilium cryptum JF-5] Length = 251 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 74/244 (30%), Positives = 113/244 (46%), Gaps = 4/244 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W + AI+L V ++GE ++ V+ +G G R G R PI Q GNL+ W + Sbjct: 1 MEWSEPAIVLSVAAFGESDLRTIVLAETHGAWHGLARGGAGRRGAPIWQEGNLINARWVA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGL-QSIVPLFRFLPEREPCLELYDMLNIFLN 119 RL + LG E++ A ++ L L L + LPERE + L L Sbjct: 61 RLPEQLGSISGELVHPAAAIAMADPLALAVLRAACAVAAGALPEREAHRGAFIRLARLLG 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 I V+ EL LL+ +G+GLDL+ C ++G +DL +VSP++G AV R + Sbjct: 121 GIGIAGTALPALVRFELELLRELGYGLDLSSCALSGAAEDLAFVSPRTGRAVARGAAGDW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSL---KSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 ++L LP+FL E+ D L + LT +FL + A R + +L Sbjct: 181 VPRLLKLPAFLLDEDAADDKADLAACRDGLALTGHFLARDAFGARHAPLPTARLDLYDRL 240 Query: 237 LELI 240 + Sbjct: 241 TRRL 244 >gi|332344440|gb|AEE57774.1| DNA repair protein RecO [Escherichia coli UMNK88] Length = 242 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 82/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 FGGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + EL LL ++G+G++ T C +G D + Sbjct: 117 IESLAGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDDTMTYRYREEKGFIASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + DAD+L++A + T + AL+ + RE F Sbjct: 177 VIDNKTFTGRQLKALNAREFPDADTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|15803091|ref|NP_289122.1| DNA repair protein RecO [Escherichia coli O157:H7 EDL933] gi|15832685|ref|NP_311458.1| DNA repair protein RecO [Escherichia coli O157:H7 str. Sakai] gi|16130490|ref|NP_417060.1| gap repair protein [Escherichia coli str. K-12 substr. MG1655] gi|26248930|ref|NP_754970.1| DNA repair protein RecO [Escherichia coli CFT073] gi|82777991|ref|YP_404340.1| DNA repair protein RecO [Shigella dysenteriae Sd197] gi|89109371|ref|AP_003151.1| gap repair protein [Escherichia coli str. K-12 substr. W3110] gi|91211891|ref|YP_541877.1| DNA repair protein RecO [Escherichia coli UTI89] gi|110642727|ref|YP_670457.1| DNA repair protein RecO [Escherichia coli 536] gi|117624786|ref|YP_853699.1| DNA repair protein RecO [Escherichia coli APEC O1] gi|168748365|ref|ZP_02773387.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4113] gi|168757774|ref|ZP_02782781.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4401] gi|168761186|ref|ZP_02786193.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4501] gi|168768669|ref|ZP_02793676.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4486] gi|168773509|ref|ZP_02798516.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4196] gi|168778542|ref|ZP_02803549.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4076] gi|168787925|ref|ZP_02812932.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC869] gi|168798947|ref|ZP_02823954.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC508] gi|170019152|ref|YP_001724106.1| DNA repair protein RecO [Escherichia coli ATCC 8739] gi|170082174|ref|YP_001731494.1| gap repair protein [Escherichia coli str. K-12 substr. DH10B] gi|188492218|ref|ZP_02999488.1| DNA repair protein RecO [Escherichia coli 53638] gi|191174023|ref|ZP_03035540.1| DNA repair protein RecO [Escherichia coli F11] gi|194437625|ref|ZP_03069721.1| DNA repair protein RecO [Escherichia coli 101-1] gi|195936712|ref|ZP_03082094.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4024] gi|208808195|ref|ZP_03250532.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4206] gi|208813327|ref|ZP_03254656.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4045] gi|208821700|ref|ZP_03262020.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4042] gi|209396972|ref|YP_002272040.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4115] gi|217327334|ref|ZP_03443417.1| DNA repair protein RecO [Escherichia coli O157:H7 str. TW14588] gi|218559486|ref|YP_002392399.1| DNA repair protein RecO [Escherichia coli S88] gi|218690681|ref|YP_002398893.1| DNA repair protein RecO [Escherichia coli ED1a] gi|227887601|ref|ZP_04005406.1| recombination protein O [Escherichia coli 83972] gi|237705075|ref|ZP_04535556.1| gap repair protein RecO [Escherichia sp. 3_2_53FAA] gi|238901730|ref|YP_002927526.1| gap repair protein [Escherichia coli BW2952] gi|253772536|ref|YP_003035367.1| DNA repair protein RecO [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162540|ref|YP_003045648.1| DNA repair protein RecO [Escherichia coli B str. REL606] gi|254794515|ref|YP_003079352.1| DNA repair protein RecO [Escherichia coli O157:H7 str. TW14359] gi|256021749|ref|ZP_05435614.1| DNA repair protein RecO [Escherichia sp. 4_1_40B] gi|261222999|ref|ZP_05937280.1| gap repair protein [Escherichia coli O157:H7 str. FRIK2000] gi|261259450|ref|ZP_05951983.1| gap repair protein [Escherichia coli O157:H7 str. FRIK966] gi|291283840|ref|YP_003500658.1| DNA repair protein recO [Escherichia coli O55:H7 str. CB9615] gi|293415834|ref|ZP_06658477.1| DNA repair protein RecO [Escherichia coli B185] gi|300904251|ref|ZP_07122110.1| DNA repair protein RecO [Escherichia coli MS 84-1] gi|300927691|ref|ZP_07143259.1| DNA repair protein RecO [Escherichia coli MS 187-1] gi|300951717|ref|ZP_07165536.1| DNA repair protein RecO [Escherichia coli MS 116-1] gi|300958794|ref|ZP_07170906.1| DNA repair protein RecO [Escherichia coli MS 175-1] gi|300974163|ref|ZP_07172481.1| DNA repair protein RecO [Escherichia coli MS 200-1] gi|300982269|ref|ZP_07175980.1| DNA repair protein RecO [Escherichia coli MS 45-1] gi|301022061|ref|ZP_07185988.1| DNA repair protein RecO [Escherichia coli MS 196-1] gi|301047204|ref|ZP_07194296.1| DNA repair protein RecO [Escherichia coli MS 185-1] gi|301302932|ref|ZP_07209060.1| DNA repair protein RecO [Escherichia coli MS 124-1] gi|301648329|ref|ZP_07248069.1| DNA repair protein RecO [Escherichia coli MS 146-1] gi|306814371|ref|ZP_07448533.1| DNA repair protein RecO [Escherichia coli NC101] gi|307139201|ref|ZP_07498557.1| DNA repair protein RecO [Escherichia coli H736] gi|309784620|ref|ZP_07679255.1| DNA repair protein RecO [Shigella dysenteriae 1617] gi|312973189|ref|ZP_07787361.1| DNA repair protein RecO [Escherichia coli 1827-70] gi|331643189|ref|ZP_08344324.1| DNA repair protein RecO [Escherichia coli H736] gi|331648311|ref|ZP_08349400.1| DNA repair protein RecO [Escherichia coli M605] gi|331658709|ref|ZP_08359653.1| DNA repair protein RecO [Escherichia coli TA206] gi|331664133|ref|ZP_08365043.1| DNA repair protein RecO [Escherichia coli TA143] gi|67471982|sp|P0A7H3|RECO_ECOLI RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|67471983|sp|P0A7H4|RECO_ECOL6 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|67471984|sp|P0A7H5|RECO_ECO57 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|90103525|sp|Q32CV6|RECO_SHIDS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361457|sp|Q0TES3|RECO_ECOL5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361458|sp|Q1R8G8|RECO_ECOUT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166221890|sp|A1AE95|RECO_ECOK1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|189039656|sp|B1IVR2|RECO_ECOLC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226737862|sp|B7MIQ0|RECO_ECO45 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|229485533|sp|B1XB39|RECO_ECODH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238058644|sp|B5Z139|RECO_ECO5E RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|332138214|pdb|3Q8D|A Chain A, E. Coli Reco Complex With Ssb C-Temrinus gi|332138215|pdb|3Q8D|B Chain B, E. Coli Reco Complex With Ssb C-Temrinus gi|12516982|gb|AAG57680.1|AE005487_4 protein interacts with RecR and possibly RecF proteins [Escherichia coli O157:H7 str. EDL933] gi|26109336|gb|AAN81538.1|AE016764_220 DNA repair protein recO [Escherichia coli CFT073] gi|147552|gb|AAA24515.1| recombination protein [Escherichia coli] gi|499369|gb|AAA21842.1| recO [Escherichia coli] gi|987640|dbj|BAA10912.1| recO protein [Escherichia coli K-12] gi|2367140|gb|AAC75618.1| gap repair protein [Escherichia coli str. K-12 substr. MG1655] gi|13362902|dbj|BAB36854.1| RecO protein [Escherichia coli O157:H7 str. Sakai] gi|81242139|gb|ABB62849.1| RecO [Shigella dysenteriae Sd197] gi|85675456|dbj|BAE76741.1| gap repair protein [Escherichia coli str. K12 substr. W3110] gi|91073465|gb|ABE08346.1| protein interacts with RecR and possibly RecF proteins [Escherichia coli UTI89] gi|110344319|gb|ABG70556.1| DNA repair protein RecO [Escherichia coli 536] gi|115513910|gb|ABJ01985.1| gap repair protein RecO [Escherichia coli APEC O1] gi|169754080|gb|ACA76779.1| DNA repair protein RecO [Escherichia coli ATCC 8739] gi|169890009|gb|ACB03716.1| gap repair protein [Escherichia coli str. K-12 substr. DH10B] gi|187770738|gb|EDU34582.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4196] gi|188017100|gb|EDU55222.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4113] gi|188487417|gb|EDU62520.1| DNA repair protein RecO [Escherichia coli 53638] gi|189003617|gb|EDU72603.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4076] gi|189355304|gb|EDU73723.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4401] gi|189362323|gb|EDU80742.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4486] gi|189368475|gb|EDU86891.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4501] gi|189372382|gb|EDU90798.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC869] gi|189378575|gb|EDU96991.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC508] gi|190905714|gb|EDV65336.1| DNA repair protein RecO [Escherichia coli F11] gi|194423431|gb|EDX39422.1| DNA repair protein RecO [Escherichia coli 101-1] gi|208727996|gb|EDZ77597.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4206] gi|208734604|gb|EDZ83291.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4045] gi|208741823|gb|EDZ89505.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4042] gi|209158372|gb|ACI35805.1| DNA repair protein RecO [Escherichia coli O157:H7 str. EC4115] gi|209762898|gb|ACI79761.1| RecO protein [Escherichia coli] gi|209762900|gb|ACI79762.1| RecO protein [Escherichia coli] gi|209762902|gb|ACI79763.1| RecO protein [Escherichia coli] gi|209762904|gb|ACI79764.1| RecO protein [Escherichia coli] gi|209762906|gb|ACI79765.1| RecO protein [Escherichia coli] gi|217319701|gb|EEC28126.1| DNA repair protein RecO [Escherichia coli O157:H7 str. TW14588] gi|218366255|emb|CAR04002.1| gap repair protein [Escherichia coli S88] gi|218428245|emb|CAR09162.2| gap repair protein [Escherichia coli ED1a] gi|222034270|emb|CAP77011.1| DNA repair protein recO [Escherichia coli LF82] gi|226901441|gb|EEH87700.1| gap repair protein RecO [Escherichia sp. 3_2_53FAA] gi|227835951|gb|EEJ46417.1| recombination protein O [Escherichia coli 83972] gi|238861284|gb|ACR63282.1| gap repair protein [Escherichia coli BW2952] gi|242378166|emb|CAQ32940.1| protein interacts with RecR and possibly RecF proteins, subunit of RecFOR complex [Escherichia coli BL21(DE3)] gi|253323580|gb|ACT28182.1| DNA repair protein RecO [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974441|gb|ACT40112.1| DNA repair protein RecO [Escherichia coli B str. REL606] gi|253978608|gb|ACT44278.1| DNA repair protein RecO [Escherichia coli BL21(DE3)] gi|254593915|gb|ACT73276.1| gap repair protein [Escherichia coli O157:H7 str. TW14359] gi|260448355|gb|ACX38777.1| DNA repair protein RecO [Escherichia coli DH1] gi|281179614|dbj|BAI55944.1| DNA repair protein RecO [Escherichia coli SE15] gi|290763713|gb|ADD57674.1| DNA repair protein recO [Escherichia coli O55:H7 str. CB9615] gi|291433482|gb|EFF06461.1| DNA repair protein RecO [Escherichia coli B185] gi|294489626|gb|ADE88382.1| DNA repair protein RecO [Escherichia coli IHE3034] gi|299881366|gb|EFI89577.1| DNA repair protein RecO [Escherichia coli MS 196-1] gi|300300881|gb|EFJ57266.1| DNA repair protein RecO [Escherichia coli MS 185-1] gi|300308902|gb|EFJ63422.1| DNA repair protein RecO [Escherichia coli MS 200-1] gi|300314542|gb|EFJ64326.1| DNA repair protein RecO [Escherichia coli MS 175-1] gi|300403784|gb|EFJ87322.1| DNA repair protein RecO [Escherichia coli MS 84-1] gi|300408823|gb|EFJ92361.1| DNA repair protein RecO [Escherichia coli MS 45-1] gi|300449001|gb|EFK12621.1| DNA repair protein RecO [Escherichia coli MS 116-1] gi|300464244|gb|EFK27737.1| DNA repair protein RecO [Escherichia coli MS 187-1] gi|300841867|gb|EFK69627.1| DNA repair protein RecO [Escherichia coli MS 124-1] gi|301073605|gb|EFK88411.1| DNA repair protein RecO [Escherichia coli MS 146-1] gi|305851765|gb|EFM52217.1| DNA repair protein RecO [Escherichia coli NC101] gi|307554584|gb|ADN47359.1| DNA repair protein RecO [Escherichia coli ABU 83972] gi|307625887|gb|ADN70191.1| DNA repair protein RecO [Escherichia coli UM146] gi|308927517|gb|EFP72989.1| DNA repair protein RecO [Shigella dysenteriae 1617] gi|310331784|gb|EFP99019.1| DNA repair protein RecO [Escherichia coli 1827-70] gi|315137189|dbj|BAJ44348.1| DNA repair protein recO [Escherichia coli DH1] gi|315256593|gb|EFU36561.1| DNA repair protein RecO [Escherichia coli MS 85-1] gi|315288042|gb|EFU47444.1| DNA repair protein RecO [Escherichia coli MS 110-3] gi|315292459|gb|EFU51811.1| DNA repair protein RecO [Escherichia coli MS 153-1] gi|315300508|gb|EFU59737.1| DNA repair protein RecO [Escherichia coli MS 16-3] gi|320188906|gb|EFW63565.1| DNA recombination and repair protein RecO [Escherichia coli O157:H7 str. EC1212] gi|320640814|gb|EFX10308.1| DNA repair protein RecO [Escherichia coli O157:H7 str. G5101] gi|320646160|gb|EFX15100.1| DNA repair protein RecO [Escherichia coli O157:H- str. 493-89] gi|320651455|gb|EFX19851.1| DNA repair protein RecO [Escherichia coli O157:H- str. H 2687] gi|320657056|gb|EFX24875.1| DNA repair protein RecO [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662721|gb|EFX30060.1| DNA repair protein RecO [Escherichia coli O55:H7 str. USDA 5905] gi|320667541|gb|EFX34461.1| DNA repair protein RecO [Escherichia coli O157:H7 str. LSU-61] gi|323188320|gb|EFZ73612.1| DNA repair protein RecO [Escherichia coli RN587/1] gi|323949219|gb|EGB45110.1| recombination protein O [Escherichia coli H252] gi|323955801|gb|EGB51559.1| recombination protein O [Escherichia coli H263] gi|323961180|gb|EGB56793.1| recombination protein O [Escherichia coli H489] gi|323971109|gb|EGB66356.1| recombination protein O [Escherichia coli TA007] gi|324008474|gb|EGB77693.1| DNA repair protein RecO [Escherichia coli MS 57-2] gi|324014390|gb|EGB83609.1| DNA repair protein RecO [Escherichia coli MS 60-1] gi|326340371|gb|EGD64175.1| DNA recombination and repair protein RecO [Escherichia coli O157:H7 str. 1125] gi|326345054|gb|EGD68798.1| DNA recombination and repair protein RecO [Escherichia coli O157:H7 str. 1044] gi|330912334|gb|EGH40844.1| DNA recombination and repair protein RecO [Escherichia coli AA86] gi|331039987|gb|EGI12207.1| DNA repair protein RecO [Escherichia coli H736] gi|331042860|gb|EGI15001.1| DNA repair protein RecO [Escherichia coli M605] gi|331054374|gb|EGI26401.1| DNA repair protein RecO [Escherichia coli TA206] gi|331059932|gb|EGI31909.1| DNA repair protein RecO [Escherichia coli TA143] Length = 242 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 82/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 FGGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHC 116 Query: 118 LNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQSLAGVTGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDDTMTYRYREEKGFIASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + DAD+L++A + T + AL+ + RE F Sbjct: 177 VIDNKTFTGRQLKALNAREFPDADTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|215487909|ref|YP_002330340.1| DNA repair protein RecO [Escherichia coli O127:H6 str. E2348/69] gi|215265981|emb|CAS10390.1| gap repair protein [Escherichia coli O127:H6 str. E2348/69] Length = 242 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 83/237 (35%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 FGGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + EL LL ++G+G++ T CV +G D + Sbjct: 117 IQSLAGATGTPEPALRRFELALLGHLGYGVNFTHCVGSGEPVDDTMTYRYREEKGFIASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + DAD+L++A + T + AL+ + RE F Sbjct: 177 VIDNKTFTGRQLKALNAREFPDADTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|74313127|ref|YP_311546.1| DNA repair protein RecO [Shigella sonnei Ss046] gi|157158543|ref|YP_001463888.1| DNA repair protein RecO [Escherichia coli E24377A] gi|157162044|ref|YP_001459362.1| DNA repair protein RecO [Escherichia coli HS] gi|170681019|ref|YP_001744754.1| DNA repair protein RecO [Escherichia coli SMS-3-5] gi|191167983|ref|ZP_03029785.1| DNA repair protein RecO [Escherichia coli B7A] gi|193064044|ref|ZP_03045129.1| DNA repair protein RecO [Escherichia coli E22] gi|193068426|ref|ZP_03049389.1| DNA repair protein RecO [Escherichia coli E110019] gi|194429295|ref|ZP_03061822.1| DNA repair protein RecO [Escherichia coli B171] gi|194432090|ref|ZP_03064379.1| DNA repair protein RecO [Shigella dysenteriae 1012] gi|209920044|ref|YP_002294128.1| DNA repair protein RecO [Escherichia coli SE11] gi|218547907|ref|YP_002381698.1| DNA repair protein RecO [Escherichia fergusonii ATCC 35469] gi|218555146|ref|YP_002388059.1| DNA repair protein RecO [Escherichia coli IAI1] gi|218696193|ref|YP_002403860.1| DNA repair protein RecO [Escherichia coli 55989] gi|218701079|ref|YP_002408708.1| DNA repair protein RecO [Escherichia coli IAI39] gi|218706069|ref|YP_002413588.1| DNA repair protein RecO [Escherichia coli UMN026] gi|260845250|ref|YP_003223028.1| gap repair protein RecO [Escherichia coli O103:H2 str. 12009] gi|260856659|ref|YP_003230550.1| gap repair protein RecO [Escherichia coli O26:H11 str. 11368] gi|293406007|ref|ZP_06649999.1| DNA repair protein recO [Escherichia coli FVEC1412] gi|293410981|ref|ZP_06654557.1| DNA repair protein RecO [Escherichia coli B354] gi|293446919|ref|ZP_06663341.1| DNA repair protein RecO [Escherichia coli B088] gi|298381807|ref|ZP_06991406.1| DNA repair protein recO [Escherichia coli FVEC1302] gi|300817658|ref|ZP_07097873.1| DNA repair protein RecO [Escherichia coli MS 107-1] gi|300820756|ref|ZP_07100906.1| DNA repair protein RecO [Escherichia coli MS 119-7] gi|300898320|ref|ZP_07116668.1| DNA repair protein RecO [Escherichia coli MS 198-1] gi|300920733|ref|ZP_07137139.1| DNA repair protein RecO [Escherichia coli MS 115-1] gi|300927058|ref|ZP_07142810.1| DNA repair protein RecO [Escherichia coli MS 182-1] gi|301024852|ref|ZP_07188489.1| DNA repair protein RecO [Escherichia coli MS 69-1] gi|301330333|ref|ZP_07222980.1| DNA repair protein RecO [Escherichia coli MS 78-1] gi|307313864|ref|ZP_07593480.1| DNA repair protein RecO [Escherichia coli W] gi|309794381|ref|ZP_07688804.1| DNA repair protein RecO [Escherichia coli MS 145-7] gi|312965481|ref|ZP_07779713.1| DNA repair protein RecO [Escherichia coli 2362-75] gi|331669315|ref|ZP_08370163.1| DNA repair protein RecO [Escherichia coli TA271] gi|331678561|ref|ZP_08379236.1| DNA repair protein RecO [Escherichia coli H591] gi|331684215|ref|ZP_08384811.1| DNA repair protein RecO [Escherichia coli H299] gi|92087034|sp|Q3YYV1|RECO_SHISS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166918729|sp|A7ZQ09|RECO_ECO24 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166918730|sp|A8A375|RECO_ECOHS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226737863|sp|B7NRL8|RECO_ECO7I RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226737864|sp|B7M8H8|RECO_ECO8A RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226737865|sp|B7N6F3|RECO_ECOLU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226737866|sp|B1LP78|RECO_ECOSM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226737867|sp|B7LUZ9|RECO_ESCF3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238058645|sp|B6I5D9|RECO_ECOSE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|73856604|gb|AAZ89311.1| protein interacts with RecR and possibly RecF proteins [Shigella sonnei Ss046] gi|157067724|gb|ABV06979.1| DNA repair protein RecO [Escherichia coli HS] gi|157080573|gb|ABV20281.1| DNA repair protein RecO [Escherichia coli E24377A] gi|170518737|gb|ACB16915.1| DNA repair protein RecO [Escherichia coli SMS-3-5] gi|190901990|gb|EDV61737.1| DNA repair protein RecO [Escherichia coli B7A] gi|192929279|gb|EDV82888.1| DNA repair protein RecO [Escherichia coli E22] gi|192958378|gb|EDV88818.1| DNA repair protein RecO [Escherichia coli E110019] gi|194412703|gb|EDX28998.1| DNA repair protein RecO [Escherichia coli B171] gi|194419619|gb|EDX35699.1| DNA repair protein RecO [Shigella dysenteriae 1012] gi|209913303|dbj|BAG78377.1| DNA repair protein RecO [Escherichia coli SE11] gi|218352925|emb|CAU98724.1| gap repair protein [Escherichia coli 55989] gi|218355448|emb|CAQ88057.1| gap repair protein [Escherichia fergusonii ATCC 35469] gi|218361914|emb|CAQ99514.1| gap repair protein [Escherichia coli IAI1] gi|218371065|emb|CAR18892.1| gap repair protein [Escherichia coli IAI39] gi|218433166|emb|CAR14062.1| gap repair protein [Escherichia coli UMN026] gi|257755308|dbj|BAI26810.1| gap repair protein RecO [Escherichia coli O26:H11 str. 11368] gi|257760397|dbj|BAI31894.1| gap repair protein RecO [Escherichia coli O103:H2 str. 12009] gi|284922515|emb|CBG35602.1| DNA repair protein [Escherichia coli 042] gi|291323749|gb|EFE63177.1| DNA repair protein RecO [Escherichia coli B088] gi|291428215|gb|EFF01242.1| DNA repair protein recO [Escherichia coli FVEC1412] gi|291471449|gb|EFF13933.1| DNA repair protein RecO [Escherichia coli B354] gi|298279249|gb|EFI20763.1| DNA repair protein recO [Escherichia coli FVEC1302] gi|300357982|gb|EFJ73852.1| DNA repair protein RecO [Escherichia coli MS 198-1] gi|300396383|gb|EFJ79921.1| DNA repair protein RecO [Escherichia coli MS 69-1] gi|300412304|gb|EFJ95614.1| DNA repair protein RecO [Escherichia coli MS 115-1] gi|300416942|gb|EFK00253.1| DNA repair protein RecO [Escherichia coli MS 182-1] gi|300526509|gb|EFK47578.1| DNA repair protein RecO [Escherichia coli MS 119-7] gi|300529646|gb|EFK50708.1| DNA repair protein RecO [Escherichia coli MS 107-1] gi|300843667|gb|EFK71427.1| DNA repair protein RecO [Escherichia coli MS 78-1] gi|306906365|gb|EFN36880.1| DNA repair protein RecO [Escherichia coli W] gi|308121837|gb|EFO59099.1| DNA repair protein RecO [Escherichia coli MS 145-7] gi|309702951|emb|CBJ02282.1| DNA repair protein [Escherichia coli ETEC H10407] gi|312289901|gb|EFR17789.1| DNA repair protein RecO [Escherichia coli 2362-75] gi|315061884|gb|ADT76211.1| gap repair protein [Escherichia coli W] gi|320182110|gb|EFW57014.1| DNA recombination and repair protein RecO [Shigella boydii ATCC 9905] gi|320196401|gb|EFW71025.1| DNA recombination and repair protein RecO [Escherichia coli WV_060327] gi|320200129|gb|EFW74718.1| DNA recombination and repair protein RecO [Escherichia coli EC4100B] gi|323156223|gb|EFZ42382.1| DNA repair protein RecO [Escherichia coli EPECa14] gi|323159222|gb|EFZ45212.1| DNA repair protein RecO [Escherichia coli E128010] gi|323167801|gb|EFZ53496.1| DNA repair protein RecO [Shigella sonnei 53G] gi|323173117|gb|EFZ58748.1| DNA repair protein RecO [Escherichia coli LT-68] gi|323184555|gb|EFZ69929.1| DNA repair protein RecO [Escherichia coli 1357] gi|323377535|gb|ADX49803.1| DNA repair protein RecO [Escherichia coli KO11] gi|323936305|gb|EGB32596.1| recombination protein O [Escherichia coli E1520] gi|323944622|gb|EGB40690.1| recombination protein O [Escherichia coli H120] gi|323968013|gb|EGB63425.1| recombination protein O [Escherichia coli M863] gi|324020023|gb|EGB89242.1| DNA repair protein RecO [Escherichia coli MS 117-3] gi|324118225|gb|EGC12121.1| recombination protein O [Escherichia coli E1167] gi|327252275|gb|EGE63947.1| DNA repair protein RecO [Escherichia coli STEC_7v] gi|331064509|gb|EGI36420.1| DNA repair protein RecO [Escherichia coli TA271] gi|331075021|gb|EGI46341.1| DNA repair protein RecO [Escherichia coli H591] gi|331079167|gb|EGI50369.1| DNA repair protein RecO [Escherichia coli H299] gi|332088077|gb|EGI93202.1| DNA repair protein RecO [Shigella boydii 5216-82] gi|332089248|gb|EGI94355.1| DNA repair protein RecO [Shigella dysenteriae 155-74] gi|333000425|gb|EGK20007.1| DNA repair protein RecO [Shigella flexneri VA-6] Length = 242 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 82/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 FGGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQSLAGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDDTMTYRYREEKGFIASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + DAD+L++A + T + AL+ + RE F Sbjct: 177 VIDNKTFTGRQLKALNAREFPDADTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|331654027|ref|ZP_08355028.1| DNA repair protein RecO [Escherichia coli M718] gi|331048876|gb|EGI20952.1| DNA repair protein RecO [Escherichia coli M718] Length = 242 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 82/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 FGGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQSLAGGTGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDDTMTYRYREEKGFIASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + DAD+L++A + T + AL+ + RE F Sbjct: 177 VIDNKTFTGRQLKALNAREFPDADTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|205353675|ref|YP_002227476.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|238690509|sp|B5RD47|RECO_SALG2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|205273456|emb|CAR38433.1| DNA repair protein recO [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628779|gb|EGE35122.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 242 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 81/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 YSGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLNC 116 Query: 118 LNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGERVDDTMTYRYREEKGFFASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + +E + D D+L+++ + T + AL+ + RE F Sbjct: 177 VIDNNTFTGRHLKALEEREFPDVDTLRASKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|260771920|ref|ZP_05880838.1| DNA recombination and repair protein RecO [Vibrio metschnikovii CIP 69.14] gi|260613212|gb|EEX38413.1| DNA recombination and repair protein RecO [Vibrio metschnikovii CIP 69.14] Length = 241 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 71/228 (31%), Gaps = 11/228 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + + R + LQ + + W + Sbjct: 9 FVLNRRPYSESSLILDVFSEEYGRLTLMAKGARGKRSQLKGALQPFTPLLLKW---SGNS 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + LS + + R L P L+ L Sbjct: 66 TMKTLRQAESISLGLPLSGISLYSAMYVNELVGRVLANDVPSPALFHDYLFALTELAQSD 125 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL ++G+G+D C TG + Sbjct: 126 NPEPALRRFELALLSSLGYGVDFLHCAGTGEPITPTMTYRYREQKGFIASVRRDNLTFYG 185 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 E + + L++A + T + AL+ + RE F Sbjct: 186 DELIAISERRFTTKNQLQAAKRFT-----RIALKPYLGGKPLKSRELF 228 >gi|295097902|emb|CBK86992.1| DNA replication and repair protein RecO [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 235 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 81/234 (34%), Gaps = 13/234 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 WQ A +L R + E +++L+V T + GR + +S R + LQ + V + Sbjct: 4 WQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSRRSNLKGALQPFTPLLVRFGG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R A LS GL + R L EL+ + Sbjct: 63 RGEVKTLR---SAEAVSLALPLSGITLYSGLYVNELISRVLEHETRFSELFFDYLHCIQA 119 Query: 121 HKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + + EL LL ++G+G+D C +G + + + Sbjct: 120 LAGATGTPEPVLRRFELALLGHLGYGVDFLHCAGSGDEVEDTMTYRYREEKGFIASVVVD 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 E + DAD+L++A + T + AL+ + RE F Sbjct: 180 NSTFTGRQLRALYEREFPDADTLRAAKRFT-----RIALKPYLGGKPLKSRELF 228 >gi|307260994|ref|ZP_07542676.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306869296|gb|EFN01091.1| DNA repair protein recO [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 240 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 79/243 (32%), Gaps = 13/243 (5%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 W +L R Y E +++++ T ++GR + + + +LQ + + W Sbjct: 4 NWH-RGFVLHRREYSETSLLVDFFTEEHGRITLLAKGARRPHSPLKAVLQPFTPLLLRWS 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + + + G L R L + EL+ + Sbjct: 63 GKGDLKTLTKAEP---ASLTLPMQTLALYSGFYVNEVLARVLENQTAYPELFQHYLQCMT 119 Query: 120 CHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 P I I E +LK +G+G++ + C TG + L Sbjct: 120 RLATQPEKIESILRTFEFQMLKVLGYGVNFSICAATGDPVSPSMTYQFKENEGFIASLLR 179 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 L +++ D +L++A + T + AL+ + RE F L Sbjct: 180 NNASFLGKDLLAFEQLDFSDKATLQAAKRFT-----RIALKPYLGSQPLKSRELFQSVLP 234 Query: 238 ELI 240 + Sbjct: 235 NKL 237 >gi|331674014|ref|ZP_08374777.1| DNA repair protein RecO [Escherichia coli TA280] gi|331069287|gb|EGI40679.1| DNA repair protein RecO [Escherichia coli TA280] Length = 242 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 82/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 FGGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHC 116 Query: 118 LNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQSLAGVTGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDDTMTYRYREEKGFIASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + DAD+L++A + T + AL+ + RE F Sbjct: 177 VIDNKTFTGRQLKALNTREFPDADTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|333001658|gb|EGK21225.1| DNA repair protein RecO [Shigella flexneri K-272] gi|333015934|gb|EGK35269.1| DNA repair protein RecO [Shigella flexneri K-227] Length = 242 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 82/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 FGGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQSLAGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDDTMTYRYREEKGFITSV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + DAD+L++A + T + AL+ + RE F Sbjct: 177 VIDNKTFTGRQLKALNAREFPDADTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|323978405|gb|EGB73490.1| recombination protein O [Escherichia coli TW10509] Length = 243 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 82/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 2 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 61 FGGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHC 117 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + EL LL ++G+G++ T C +G D + Sbjct: 118 IQSLAGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDDTMTYRYREEKGFIASV 177 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + DAD+L++A + T + AL+ + RE F Sbjct: 178 VIDNKTFTGRQLKALNAREFPDADTLRAAKRFT-----RMALKPYLGGKPLKSRELF 229 >gi|242240201|ref|YP_002988382.1| DNA repair protein RecO [Dickeya dadantii Ech703] gi|242132258|gb|ACS86560.1| DNA repair protein RecO [Dickeya dadantii Ech703] Length = 244 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 75/237 (31%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRN--GQSHRMQPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ T GR + + ++ LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLLLDLFTENEGRVRVLAKGARARRSNLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A L +L GL L R L L+ Sbjct: 60 WGGRGEVKTLRNAEP---VSLALPLHGALLYSGLYVNELLMRVLEFETDYSALFFDYLYC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + EL LL ++G+G+D C +G + Sbjct: 117 LQQLAAAQGSPEPALRRFELALLAHLGYGVDFLHCAGSGQPVSDTMTYRYREEKGFIASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + D ++L++A + T + AL+ + RE F Sbjct: 177 VVDNRSFTGRELQALAAREFPDMETLRAAKRFT-----RIALKPYLGPRPLKSRELF 228 >gi|167854944|ref|ZP_02477719.1| DNA repair protein RecO [Haemophilus parasuis 29755] gi|167853901|gb|EDS25140.1| DNA repair protein RecO [Haemophilus parasuis 29755] Length = 239 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 79/243 (32%), Gaps = 13/243 (5%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 WQ +L R Y E +++++ T +GR + + R + +LQ + + W Sbjct: 4 QWQ-RGFVLHRREYSESSLLVDFFTENHGRITLLAKGVRRPRSPLKSVLQPFTPLLLKWT 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + + + G L R L EL+ + Sbjct: 63 GKGDLKTLTKAEP---ASLTLPMQTLALYSGFYVNEVLARVLENHTAYPELFQHYLQCMT 119 Query: 120 CHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 P+ I I E LK +G+G+D C TG D + L Sbjct: 120 KLASQPNEIEPILRTFEFQTLKALGYGVDFCHCAATGKPVDPKMSYQFRENEGFIASLLQ 179 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 + + E + ++L+SA + T + AL+ + RE F L Sbjct: 180 NNYTFIGKDLLAFAEMNFSEKETLQSAKRFT-----RIALKPYLGSAPLKSRELFQSVLP 234 Query: 238 ELI 240 + Sbjct: 235 NRL 237 >gi|315615827|gb|EFU96459.1| DNA repair protein RecO [Escherichia coli 3431] Length = 242 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 82/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 FGGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHC 116 Query: 118 LNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQSLAGVTGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDDTMSYRYREEKGFIASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + DAD+L++A + T + AL+ + RE F Sbjct: 177 VIDNKTFTGRQLKALNAREFPDADTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|24113907|ref|NP_708417.1| DNA repair protein RecO [Shigella flexneri 2a str. 301] gi|30063967|ref|NP_838138.1| DNA repair protein RecO [Shigella flexneri 2a str. 2457T] gi|42559468|sp|Q83QI6|RECO_SHIFL RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|24053008|gb|AAN44124.1| RecO protein [Shigella flexneri 2a str. 301] gi|30042223|gb|AAP17948.1| RecO protein [Shigella flexneri 2a str. 2457T] gi|281601978|gb|ADA74962.1| DNA repair protein recO [Shigella flexneri 2002017] gi|313648243|gb|EFS12687.1| DNA repair protein RecO [Shigella flexneri 2a str. 2457T] gi|332753974|gb|EGJ84348.1| DNA repair protein RecO [Shigella flexneri 4343-70] gi|332755801|gb|EGJ86159.1| DNA repair protein RecO [Shigella flexneri 2747-71] gi|332761958|gb|EGJ92231.1| DNA repair protein RecO [Shigella flexneri K-671] gi|332766566|gb|EGJ96771.1| DNA repair protein RecO [Shigella flexneri 2930-71] gi|333000822|gb|EGK20394.1| DNA repair protein RecO [Shigella flexneri K-218] gi|333016797|gb|EGK36123.1| DNA repair protein RecO [Shigella flexneri K-304] Length = 242 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 81/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 FGGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHC 116 Query: 118 LNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQSLAGDTGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDGTMTYRYREEKGFIASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + DAD+L++A + T + AL+ + RE F Sbjct: 177 VIDNKTFTGRQLKALNAREFPDADTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|110806510|ref|YP_690030.1| DNA repair protein RecO [Shigella flexneri 5 str. 8401] gi|123342607|sp|Q0T1U0|RECO_SHIF8 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|110616058|gb|ABF04725.1| protein interacts with RecR and possibly RecF proteins [Shigella flexneri 5 str. 8401] Length = 242 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 82/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 FGGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQSLAGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDGTMTYRYREEKGFIASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + DAD+L++A + T + AL+ + RE F Sbjct: 177 VIDNKTFTGRQLKALNAREFPDADTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|238920903|ref|YP_002934418.1| DNA repair protein RecO, [Edwardsiella ictaluri 93-146] gi|238870472|gb|ACR70183.1| DNA repair protein RecO, putative [Edwardsiella ictaluri 93-146] Length = 242 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 73/234 (31%), Gaps = 13/234 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L+ T +GR + +S R + LQ + + W Sbjct: 4 WQ-RAFVLHARPYSETSLMLDTFTEGHGRVRLLAKGARSRRSLLKGALQPFTPLLIRWGG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R A LS GL L R L + L+ + Sbjct: 63 RGEVKTLR---SAEAVSLALPLSGITLYSGLYVNELLARVLEQETCYNALFFDYLHCIQH 119 Query: 121 H-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + EL LL +G+G+D C +G + + Sbjct: 120 LAAHAGSPEPALRRFELALLAQLGYGVDFLHCAGSGEPVADTMTYRYRAEKGFIASLVVD 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + D +L++A + T + AL+ + RE F Sbjct: 180 QLSFTGRDLKALASREFPDGATLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|300935698|ref|ZP_07150668.1| DNA repair protein RecO [Escherichia coli MS 21-1] gi|300459132|gb|EFK22625.1| DNA repair protein RecO [Escherichia coli MS 21-1] Length = 242 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 82/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 FGGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQSLAGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDDTMTYRYREEKGFIASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + DAD+L++A + T + AL+ + RE F Sbjct: 177 VIDNKTFTGRQLKALNVREFPDADTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|330446943|ref|ZP_08310594.1| DNA repair protein RecO [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491134|dbj|GAA05091.1| DNA repair protein RecO [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 236 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 72/236 (30%), Gaps = 11/236 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNW 58 M +L R Y E ++IL+V + +GR + + R + LQ + + W Sbjct: 1 MEGLQRCFVLHSRPYSETSLILDVFSEDHGRLTLLSKGARRKRSNLKGTLQPFTPLFMKW 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + + S + + L R L P +L+ L Sbjct: 61 SGKG---AMPVLTHAEPISIGLPMRSYILYSAMYVNEILVRVLGNHTPYPQLFLDYLNVL 117 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + EL LL ++G+G+D C +G+ + + Sbjct: 118 RELAQADNPEPALRRFELSLLHHLGYGIDFLHCAGSGLGVEDDMTYNYREQQGFIASMKI 177 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFL 233 + L++A + T + AL+ + RE F+ Sbjct: 178 GQMTFKGNELKAIAARCFETPEQLRAAKRFT-----RMALKPYLGSKPLKSRELFI 228 >gi|261867311|ref|YP_003255233.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412643|gb|ACX82014.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans D11S-1] Length = 228 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 78/227 (34%), Gaps = 12/227 (5%) Query: 10 LGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQNLG 67 L +SY E +++++++T +GR + ++ R + +LQ + + W R + Sbjct: 2 LHRKSYSETSLLIDLLTEDFGRISVLAKGARAKRSMLKGVLQPFTPLLLRWSGRGELKIL 61 Query: 68 EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI 127 + A L + G L R L +L+ L + Sbjct: 62 TKAEP---AAIALPLQNIALYSGFYLNELLCRVLEPETAYPQLFQQYLQCLTQLAMNQQQ 118 Query: 128 -GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVL 186 E LL+ +G+G+D T C +G T + + + Sbjct: 119 VEPALRTFEFQLLRTLGYGIDFTHCAGSGNTVEADMTYRYREEKGFIASLIKDNLTFYGR 178 Query: 187 PSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 +++ + D L +A + T + AL+ + RE F Sbjct: 179 ELLAFEQTRFDDPSILVAAKRFT-----RIALKPYLGDKPLKSRELF 220 >gi|82545017|ref|YP_408964.1| DNA repair protein RecO [Shigella boydii Sb227] gi|187733291|ref|YP_001881344.1| DNA repair protein RecO [Shigella boydii CDC 3083-94] gi|90103524|sp|Q31XS2|RECO_SHIBS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238691722|sp|B2TXX8|RECO_SHIB3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|81246428|gb|ABB67136.1| RecO [Shigella boydii Sb227] gi|187430283|gb|ACD09557.1| DNA repair protein RecO [Shigella boydii CDC 3083-94] gi|320186364|gb|EFW61098.1| DNA recombination and repair protein RecO [Shigella flexneri CDC 796-83] gi|332092621|gb|EGI97693.1| DNA repair protein RecO [Shigella boydii 3594-74] Length = 242 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 82/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 FGGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQSLAGATGTPEPALRRFELALLGHLGYGVNFTYCAGSGEPVDDTMTYRYREEKGFIASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + DAD+L++A + T + AL+ + RE F Sbjct: 177 VIDNKTFTGRQLKALNAREFPDADTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|261340866|ref|ZP_05968724.1| DNA repair protein RecO [Enterobacter cancerogenus ATCC 35316] gi|288317297|gb|EFC56235.1| DNA repair protein RecO [Enterobacter cancerogenus ATCC 35316] Length = 236 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 81/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + V Sbjct: 2 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLVR 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL + R L EL+ Sbjct: 61 FGGRGEVKTLR---SAEAVSLALPLSGITLYSGLYVNELISRVLEHETRFSELFFDYLHC 117 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + EL LL ++G+G+D C +G + + Sbjct: 118 IQALAGATGTPEPALRRFELALLGHLGYGVDFLHCAGSGEEVEDTMTYRYREEKGFIASI 177 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + E + DAD+L++A + T + AL+ + RE F Sbjct: 178 VVDNSTFTGRHLRALYEREFPDADTLRAAKRFT-----RIALKPYLGGKPLKSRELF 229 >gi|256017286|ref|ZP_05431151.1| DNA repair protein RecO [Shigella sp. D9] gi|332278277|ref|ZP_08390690.1| DNA repair protein recO [Shigella sp. D9] gi|332100629|gb|EGJ03975.1| DNA repair protein recO [Shigella sp. D9] Length = 242 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 82/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A IL R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFILHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 FGGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQSLAGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDDTMTYRYREEKGFIASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + DAD+L++A + T + AL+ + RE F Sbjct: 177 VIDNKTFTGRQLKALNAREFPDADTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|219870404|ref|YP_002474779.1| DNA repair protein RecO [Haemophilus parasuis SH0165] gi|254764635|sp|B8F3C9|RECO_HAEPS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|219690608|gb|ACL31831.1| recombinational DNA repair protein (RecF pathway) [Haemophilus parasuis SH0165] Length = 239 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 79/243 (32%), Gaps = 13/243 (5%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 WQ +L R Y E +++++ T +GR + + R + +LQ + + W Sbjct: 4 QWQ-RGFVLHRREYSESSLLVDFFTENHGRITLLAKGVRRPRSPLKSVLQPFTPLLLKWT 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + + + G L R L EL+ + Sbjct: 63 GKGDLKTLTKAEP---ASLTLPMQTLALYSGFYVNEVLARVLENHTAYPELFQHYLHCMT 119 Query: 120 CHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 P+ I I E LK +G+G+D C TG D + L Sbjct: 120 KLASQPNEIEPILRTFEFQTLKALGYGVDFCHCAATGKPVDPKMSYQFRENEGFIASLLQ 179 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 + + E + ++L+SA + T + AL+ + RE F L Sbjct: 180 NNYTFIGKDLLAFAEMDFSEKETLQSAKRFT-----RIALKPYLGSAPLKSRELFQSVLP 234 Query: 238 ELI 240 + Sbjct: 235 NRL 237 >gi|296104240|ref|YP_003614386.1| DNA repair protein RecO [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058699|gb|ADF63437.1| DNA repair protein RecO [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 235 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 80/237 (33%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + V Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL + R L EL+ Sbjct: 60 FGGRGEVKTLR---SAEAVSLALPLSGITLYSGLYVNELISRVLEHETRFSELFFDYLHC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + EL LL ++G+G+D C +G + + Sbjct: 117 IQALAGATGSPEPALRRFELALLGHLGYGVDFLHCAGSGDEVEDGMTYRYREEKGFIASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + E + D D+L++A + T + AL+ + RE F Sbjct: 177 VIDNNTFTGRQLRALYEREFPDQDTLRAAKRFT-----RIALKPYLGGKPLKSRELF 228 >gi|324113092|gb|EGC07068.1| recombination protein O [Escherichia fergusonii B253] Length = 242 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 82/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 FGGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQSLAGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDDTMTYRYREEKGFIASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + DAD+L++A + T + AL+ + RE F Sbjct: 177 VIDNKTFTGRQLKALHTREFPDADTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|261820521|ref|YP_003258627.1| DNA repair protein RecO [Pectobacterium wasabiae WPP163] gi|261604534|gb|ACX87020.1| DNA repair protein RecO [Pectobacterium wasabiae WPP163] Length = 245 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 78/237 (32%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ + GR + ++ R + LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLLLDLFSESDGRVRVLAKGARARRSSLKGCLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A L+ S+ GL L R L L+ Sbjct: 60 WSGRGEVKTLRSAEP---VSLALPLTGSMLYSGLYVNELLSRVLEHETNYSALFFDYLHC 116 Query: 118 LNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + + EL LL +G+G+D C +G + + Sbjct: 117 LQHLAAQDASPEPALRRFELALLSYLGYGVDFLHCAGSGESVADTMTYQYREERGFIASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + D +LK+A + T + AL+ + RE F Sbjct: 177 VVDNKSFTGHELRSLASREFPDTGTLKAAKRFT-----RIALKPYLGGKPLKSRELF 228 >gi|213613051|ref|ZP_03370877.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 242 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 80/237 (33%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQLFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 YSGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLNC 116 Query: 118 LNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGERVDDTMTYRYREEKGFFASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + D D+L++A + T + AL+ + RE F Sbjct: 177 VIDNNTFTGRHLKALEAREFPDVDTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|253689438|ref|YP_003018628.1| DNA repair protein RecO [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756016|gb|ACT14092.1| DNA repair protein RecO [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 245 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 77/237 (32%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ + GR + ++ R + LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLLLDLFSESDGRVRVLAKGARARRSSLKGCLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A L+ S+ GL L R L L+ Sbjct: 60 WSGRGEVKTLRSAEP---VSLALPLTGSMLYSGLYVNELLSRVLEHETNYSALFFDYLHC 116 Query: 118 LNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + + EL LL +G+G+D C +G + Sbjct: 117 LQHLAAQDASPEPALRRFELALLGYLGYGVDFLHCAGSGEPVADTMTYQYREERGFIASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + D +LK+A + T + AL+ + RE F Sbjct: 177 VVDNKSFTGHELRSLASREFPDNGTLKAAKRFT-----RIALKPYLGGKPLKSRELF 228 >gi|90580327|ref|ZP_01236134.1| DNA repair protein RecO [Vibrio angustum S14] gi|90438629|gb|EAS63813.1| DNA repair protein RecO [Vibrio angustum S14] Length = 236 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 74/236 (31%), Gaps = 11/236 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNW 58 M +L R Y E ++IL+V + +GR + + R + LQ + + W Sbjct: 1 MEGLQRCFVLHSRPYSETSLILDVFSEDHGRLTLLSKGARRKRSNLKGTLQPFTPLFMKW 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + L S + + L R L P +L+ L Sbjct: 61 SGKG---AMPVLTHAEPISIGLPLRSYILYSAMYVNEILVRVLGNHTPYPQLFLDYLNVL 117 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + EL LL ++G+G+D C +G++ + + Sbjct: 118 RELAQADNPEPALRRFELSLLHHLGYGIDFLHCAGSGLSVEDDMTYNYREQQGFIASMKI 177 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFL 233 + + L++A + T + AL+ + RE F+ Sbjct: 178 GLLTFRGNELKAIAARRFETPEQLRAAKRFT-----RMALKPYLGSKPLKSRELFI 228 >gi|320176133|gb|EFW51200.1| DNA recombination and repair protein RecO [Shigella dysenteriae CDC 74-1112] Length = 242 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 83/237 (35%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LSS GL L R L EL+ Sbjct: 60 FGGRGEVKTLR---SAEAVSLALPLSSITLYSGLYINELLSRVLEYETRFSELFFDYLHC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQSLAGATGTPEPALRRFELALLGHLGYGVNFTYCAGSGEPVDDTMTYRYREEKGFIASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + DAD+L++A + T + AL+ + RE F Sbjct: 177 VIDNKTFTGRQLKALNAREFPDADTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|90412088|ref|ZP_01220095.1| DNA repair protein RecO [Photobacterium profundum 3TCK] gi|90327066|gb|EAS43445.1| DNA repair protein RecO [Photobacterium profundum 3TCK] Length = 236 Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 75/236 (31%), Gaps = 11/236 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNW 58 M +L R Y E ++IL+V + YGR + + R + LQ + + W Sbjct: 1 MEGLQRCFVLHSRPYSETSLILDVFSEDYGRLTILSKGARRKRSNLKGTLQPFTPLFMKW 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R + + + + + L R L P L+ L Sbjct: 61 TGRGS---MKTLTHAEPISISLPMRGYILYSAFYLNEVLARVLENDTPYPVLFMDYLNAL 117 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + EL LL ++G+G+D C +G+ D L + + Sbjct: 118 RELVQADNPEPALRRFELALLHHLGYGIDFLHCAGSGLPVDDLMTYNYREQKGFIASMMT 177 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFL 233 + D L++A + T + AL+ + RE F+ Sbjct: 178 GHLTFTGNQLLAIAARRFETPDQLRAAKRFT-----RIALKPYLGGKPLKSRELFI 228 >gi|325496355|gb|EGC94214.1| DNA repair protein RecO [Escherichia fergusonii ECD227] Length = 242 Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 82/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSILKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 FGGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQSLAGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDDTMTYRYREEKGFIASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + DAD+L++A + T + AL+ + RE F Sbjct: 177 VIDNKTFTGRQLKALHTREFPDADTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|297581083|ref|ZP_06943008.1| DNA repair protein recO [Vibrio cholerae RC385] gi|297534909|gb|EFH73745.1| DNA repair protein recO [Vibrio cholerae RC385] Length = 241 Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 69/221 (31%), Gaps = 10/221 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + + R + LQ + + W + Sbjct: 9 FVLHRRPYSESSLILDVFSEEYGRVTLMAKGARGKRSNLKGALQPFTPLLLKWSGNGS-- 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + LS + + R L C L+ L + Sbjct: 67 -MKTLRQAEPISLGLPLSGVYLYSAMYINELVDRVLMPEVACPGLFHDYLFALTELAQST 125 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL +G+G+D C TG + L Sbjct: 126 NPEPALRRFELALLAAMGYGVDFLHCAGTGEPVSPDMTYRYREQKGFIASVRRDNLTFLG 185 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH 226 E + + L++A + T + AL+ + Sbjct: 186 NELIAISERRFTSKEQLQAAKRFT-----RLALKPYLGGKP 221 >gi|312947136|gb|ADR27963.1| DNA repair protein RecO [Escherichia coli O83:H1 str. NRG 857C] Length = 242 Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 82/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R V LS GL L R L EL+ Sbjct: 60 FGGRGEVKTLRSAEAVSLVLP---LSGITLYSGLYINELLSRVLEYETRFSELFFDYLHC 116 Query: 118 LNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQSLAGVTGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDDTMTYRYREEKGFIASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + DAD+L++A + T + AL+ + RE F Sbjct: 177 VIDNKTFTGRQLKALNAREFPDADTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|183599775|ref|ZP_02961268.1| hypothetical protein PROSTU_03283 [Providencia stuartii ATCC 25827] gi|188022039|gb|EDU60079.1| hypothetical protein PROSTU_03283 [Providencia stuartii ATCC 25827] Length = 242 Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 75/234 (32%), Gaps = 13/234 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 WQ A +L R + E +++++ T G+ + + +R + LQ + + W Sbjct: 4 WQ-RAFVLHSRPFSETSLLVDFFTEGEGKIRLLAKGARRNRSPFRGCLQPFTPLLIRWGG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + L+ ++ GL + R + P L+ L Sbjct: 63 KGEIKTLTHADP---ISLSLPLTGTVLYSGLYLNELVTRVIEFGTPYSALFFDYLSCLQL 119 Query: 121 H-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 Q EL LL +G+G+D C +G + Sbjct: 120 LAASEHTPEAALRQFELALLSYLGYGVDFLHCAGSGEPVSDTMTYRYREEKGFIGSLVID 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + D+D+L++A + T + AL+ + RE F Sbjct: 180 QLSFTGKHLKALAAREFPDSDTLRAAKRFT-----RIALKPYLGGKPLKSRELF 228 >gi|89075086|ref|ZP_01161527.1| DNA repair protein RecO [Photobacterium sp. SKA34] gi|89049173|gb|EAR54738.1| DNA repair protein RecO [Photobacterium sp. SKA34] Length = 236 Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 74/236 (31%), Gaps = 11/236 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNW 58 M +L R Y E ++IL+V + +GR + + R + LQ + + W Sbjct: 1 MEGLQRCFVLHSRPYSETSLILDVFSEDHGRLTLLSKGARRKRSNLKGTLQPFTPLFMKW 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + L S + + L R L P +L+ L Sbjct: 61 SGKG---AMPVLTHAEPISIGLPLRSYILYSAMYVNEILVRVLGNHTPYPQLFLDYLNVL 117 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + EL LL ++G+G+D C +G++ + + Sbjct: 118 RELAQADNPEPALRRFELSLLHHLGYGIDFLHCAGSGLSVEDNMTYNYREQQGFIASMKI 177 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFL 233 + + L++A + T + AL+ + RE F+ Sbjct: 178 GLLTFRGNELKAIAARRFETPEQLRAAKRFT-----RMALKPYLGSKPLKSRELFI 228 >gi|269140065|ref|YP_003296766.1| DNA repair protein [Edwardsiella tarda EIB202] gi|267985726|gb|ACY85555.1| DNA repair protein [Edwardsiella tarda EIB202] gi|304559893|gb|ADM42557.1| DNA recombination and repair protein RecO [Edwardsiella tarda FL6-60] Length = 242 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 73/234 (31%), Gaps = 13/234 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L+ T +GR + +S R + LQ + + W Sbjct: 4 WQ-RAFVLHARPYSETSLMLDTFTEGHGRVRLLAKGARSRRSLLKGALQPFTPLLIRWGG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R A LS GL L R L + L+ + Sbjct: 63 RGEVKTLR---SAEAVSLALPLSGITLYSGLYVNELLARVLEQETCYSALFFDYLHCIQH 119 Query: 121 H-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + EL LL +G+G+D C +G + + Sbjct: 120 LAAHAGSPEPALRRFELALLTQLGYGVDFLHCAGSGEPVADTMTYRYREEKGFIASLVVD 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + D +L++A + T + AL+ + RE F Sbjct: 180 QLSFTGRDLKALASREFPDGATLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|300311262|ref|YP_003775354.1| DNA repair protein [Herbaspirillum seropedicae SmR1] gi|300074047|gb|ADJ63446.1| DNA repair protein [Herbaspirillum seropedicae SmR1] Length = 286 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 79/234 (33%), Gaps = 10/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRLA 63 +L Y E ++I++V +R +GR + + +++ LQ + ++W + Sbjct: 58 PGFVLHSYPYKETSLIIDVFSRDHGRVALVAKGAKRPHSKLRGALQTFQPLSLSWSGKSE 117 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + L S L G L + L + L+D LN Sbjct: 118 VRT---LTDAEWVGGLLPLEKSALLCGFYLNELLVKLLAREDAHPALFDHYVATLNKLAH 174 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + Q E +LLK G + + CVV+G T + R L Sbjct: 175 GENAPIVLRQFERILLKQTGVAGNWSHCVVSGKTVRPDLIYVVDPEQGTRPERLSDRAPK 234 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN-IIHCHLLRENFLGKL 236 + + L E + + QL FL +Y L H+ R+ + + Sbjct: 235 VSGKTLLDMEREDYSDPT----TQLQSKFLMRYLLAHHLGGAQLNTRQILIDLM 284 >gi|227112905|ref|ZP_03826561.1| DNA repair protein RecO [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227328579|ref|ZP_03832603.1| DNA repair protein RecO [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 245 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 77/237 (32%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ + GR + ++ R + LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLLLDLFSESDGRVRVLAKGARARRSSLKGCLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A L+ S+ GL L R L L+ Sbjct: 60 WSGRGEVKTLRSAEP---VSLALPLTGSMLYSGLYVNELLSRVLEHETNYSALFFDYLHC 116 Query: 118 LNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + + EL LL +G+G+D C +G + Sbjct: 117 LQHLAAQDASPEPALRRFELALLGYLGYGVDFLHCAGSGEPVADTMTYQYREERGFIASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + D +LK+A + T + AL+ + RE F Sbjct: 177 VVDNKSFTGHELRSLASREFPDVGTLKAAKRFT-----RIALKPYLGGKPLKSRELF 228 >gi|311278502|ref|YP_003940733.1| DNA repair protein RecO [Enterobacter cloacae SCF1] gi|308747697|gb|ADO47449.1| DNA repair protein RecO [Enterobacter cloacae SCF1] Length = 242 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 78/237 (32%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + ++ R + LQ + V Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARAKRSNLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL + R L EL+ Sbjct: 60 FGGRGDVKTLR---SAEAVSLALPLSGITLYSGLYVNELISRVLEHETRFSELFFDYLHC 116 Query: 118 LNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + EL LL ++G+G+D C +G D + Sbjct: 117 IQALAGATRSPEPALRRFELALLGHLGYGVDFLHCAGSGEEVDDGMTYRYREEKGFIASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + D D+L++A + T + AL+ + RE F Sbjct: 177 VIDNSTFTGRQLKALDAREFPDVDTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|260869252|ref|YP_003235654.1| gap repair protein RecO [Escherichia coli O111:H- str. 11128] gi|257765608|dbj|BAI37103.1| gap repair protein RecO [Escherichia coli O111:H- str. 11128] gi|323177305|gb|EFZ62893.1| DNA repair protein RecO [Escherichia coli 1180] Length = 242 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 81/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 FGGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQSLAGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDDTMTYRYREEKGFIASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + DAD+L++A + T AL+ + RE F Sbjct: 177 VIDNKTFTGRQLKALNAREFPDADTLRAAKRFTCM-----ALKPYLGGKPLKSRELF 228 >gi|317491020|ref|ZP_07949456.1| recombination protein O [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920567|gb|EFV41890.1| recombination protein O [Enterobacteriaceae bacterium 9_2_54FAA] Length = 242 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 76/237 (32%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ T +GR + +S R + LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLLLDLFTEGHGRVRLLAKGARSKRSSLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W + L+ GL + R L + L+ Sbjct: 60 WGGKGEVKTLRNAEP---VSLGLPLTGISLYSGLYVNELVSRVLEQETNYSSLFFDYLNC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + EL LL N+G+G+D C +G + Sbjct: 117 LQNLAATVGSPEHTLREFELALLGNLGYGIDFLHCAGSGEPVSDDMTYRYREEKGFIASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 L E + D +L++A + T + AL+ + RE F Sbjct: 177 LVDQLSFTGRDLKALAERRFPDPITLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|52424294|ref|YP_087431.1| DNA repair protein RecO [Mannheimia succiniciproducens MBEL55E] gi|81609676|sp|Q65W14|RECO_MANSM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|52306346|gb|AAU36846.1| RecO protein [Mannheimia succiniciproducens MBEL55E] Length = 228 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 36/234 (15%), Positives = 80/234 (34%), Gaps = 12/234 (5%) Query: 10 LGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQNLG 67 L + Y E ++++++ T + GR + ++ R + +LQ + + W + + + Sbjct: 2 LHRKPYSETSLLVDLFTEESGRLTVLAKGARAKRSALKSVLQPFTPLLLRWTGKSSLKIL 61 Query: 68 EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI 127 + A L + G + R + P +L+ L + Sbjct: 62 TKAEP---AAIALPLQQTALFSGFYVNELITRVIEPETPNPQLFQDYLHCLTSLAVSQNF 118 Query: 128 -GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVL 186 + E LL +G+G+D C +G D + + Sbjct: 119 VEPALREFEFKLLNILGYGVDFLHCAGSGEPVDENMTYRYREEKGFIASLIKDNLTFFGR 178 Query: 187 PSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLLEL 239 ++ + + L++A + T + AL+ + + RE F +L L Sbjct: 179 ELIAFERQDFSEKSVLQAAKRFT-----RVALKPYLGNKPLKSRELFTQTILHL 227 >gi|50122198|ref|YP_051365.1| DNA repair protein RecO [Pectobacterium atrosepticum SCRI1043] gi|61214937|sp|Q6D221|RECO_ERWCT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|49612724|emb|CAG76174.1| DNA repair protein [Pectobacterium atrosepticum SCRI1043] Length = 245 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 77/237 (32%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ + GR + ++ R + LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLLLDLFSESDGRVRVLAKGARARRSSLKGCLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A L+ S+ GL L R L L+ Sbjct: 60 WSGRGEVKTLRSAEP---VSLALPLTGSMLYSGLYVNELLARVLEHETNYSALFFDYLHC 116 Query: 118 LNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + + EL LL +G+G+D C +G + Sbjct: 117 LQHLAAQDASPEPALRRFELALLGYLGYGVDFLHCAGSGEPVADTMTYQYREERGFTASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + D +LK+A + T + AL+ + RE F Sbjct: 177 VVDNKSFTGHELHSLASREFPDVGTLKAAKRFT-----RIALKPYLGGKPLKSRELF 228 >gi|1033154|gb|AAA79827.1| CG Site No. 17962 [Escherichia coli str. K-12 substr. MG1655] Length = 242 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 82/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVXKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 FGGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHC 116 Query: 118 LNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQSLAGVTGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDDTMTYRYREEKGFIASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + DAD+L++A + T + AL+ + RE F Sbjct: 177 VIDNKTFTGRQLKALNAREFPDADTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|238753922|ref|ZP_04615282.1| DNA repair protein recO [Yersinia ruckeri ATCC 29473] gi|238707910|gb|EEQ00268.1| DNA repair protein recO [Yersinia ruckeri ATCC 29473] Length = 243 Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 48/243 (19%), Positives = 82/243 (33%), Gaps = 14/243 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ T GR + +S R + LQ + V Sbjct: 1 MEGWQ-RAFVLHSRPYSETSLMLDLFTEGEGRMRVLAKGARSRRSNLKGCLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A LS ++ GL L R L L+ Sbjct: 60 WAGRGEVKTLRSAEP---VSLALPLSGTMLYSGLYVNELLSRVLEHGTNYSALFFDYLHC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + Q EL +L ++G+G+D C +G + Sbjct: 117 LQALAATDGSPECVLRQFELAMLASLGYGVDFLHCAGSGQPVADSMTYRYREEKGFIASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 + + D+D+L++A + T + AL+ + RE F Sbjct: 177 VVDHYSFTGRQLQALANREFPDSDTLRAAKRFT-----RMALRPYLGGKPLKSRELFRQF 231 Query: 236 LLE 238 +++ Sbjct: 232 VIK 234 >gi|54310185|ref|YP_131205.1| DNA repair protein RecO [Photobacterium profundum SS9] gi|61215025|sp|Q6LMS4|RECO_PHOPR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|46914626|emb|CAG21403.1| putative DNA repair protein RecO [Photobacterium profundum SS9] Length = 236 Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 77/242 (31%), Gaps = 11/242 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNW 58 M +L R Y E ++IL+V + YGR + + R + LQ + + W Sbjct: 1 MEGLQRCFVLHYRPYSETSLILDVFSEDYGRLTILSKGARRKRSNLKGTLQPFTPLFMKW 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R + + + + + L R L P L+ L Sbjct: 61 TGRGS---MKTLTHAEPISISLPMRGYILYSAFYLNEVLVRVLENDTPYPVLFMDYLNAL 117 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + EL LL ++G+G+D C +G+ D L + + Sbjct: 118 RELAQADNPEPALRRFELALLHHLGYGIDFLHCAGSGLPIDDLMTYHYREQKGFIASMMT 177 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 + D LK+A + T + AL+ + RE F+ + Sbjct: 178 GHFTFTGNQLLAIAARRFETPDQLKAAKRFT-----RIALKPYLGGKPLKSRELFIPRTR 232 Query: 238 EL 239 + Sbjct: 233 NI 234 >gi|209695941|ref|YP_002263871.1| DNA repair protein RecO [Aliivibrio salmonicida LFI1238] gi|238058640|sp|B6EKM7|RECO_ALISL RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|208009894|emb|CAQ80207.1| DNA repair protein RecO (recombination protein O) [Aliivibrio salmonicida LFI1238] Length = 238 Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 84/237 (35%), Gaps = 12/237 (5%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R + +LQA + + W + + Sbjct: 9 FVLHRRPYSESSLILDVFSEEYGRLSIISKGARSKRSNLKGVLQAFTPLLMKWSGKGS-- 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + A L+ L + R + + P L+ L Sbjct: 67 -MRTLRQAETISLAIPLTGINLYSALYINELVVRVIEQETPYPALFLDYLTALTELAQTK 125 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVT-GVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 + EL LL ++G+G+D C + + + + S+ Sbjct: 126 NPEPALRRFELALLSSLGYGVDFLHCAGSGEMVSPEMTYRYREQKGFMASIRHDPLMSFK 185 Query: 185 VLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLLELI 240 E + I + LK+A + T + AL+ + RE FL + ++ Sbjct: 186 GDELIAISERRFITPEQLKAAKRFT-----RIALKPYLGGKPLKSRELFLPRTRSIL 237 >gi|268593248|ref|ZP_06127469.1| DNA repair protein RecO [Providencia rettgeri DSM 1131] gi|291311143|gb|EFE51596.1| DNA repair protein RecO [Providencia rettgeri DSM 1131] Length = 242 Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 74/234 (31%), Gaps = 13/234 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L+ T G+ + + +R + LQ + + W Sbjct: 4 WQ-RAFVLHSRPYSETSLLLDFFTEGEGKIRLLAKGARRNRSPLRGCLQPFTPLLIRWGG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + A L+ ++ GL R L P L+ L Sbjct: 63 KGEIKTLINADP---VSLALPLTGTVLYSGLYLNELTARVLEFGTPYSSLFFDYLSCLQI 119 Query: 121 H-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + EL LL +G+G+D C +G + Sbjct: 120 LAASEHTPEFALRRFELALLSYLGYGVDFLHCAGSGEPVSDTMTYRYREEKGFIGSLVVD 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + DAD+LK+A + T + AL+ + RE F Sbjct: 180 QLSFTGKQLKALASREFPDADTLKAAKRFT-----RLALKPYLGGKPLKSRELF 228 >gi|326402842|ref|YP_004282923.1| DNA repair protein RecO [Acidiphilium multivorum AIU301] gi|325049703|dbj|BAJ80041.1| DNA repair protein RecO [Acidiphilium multivorum AIU301] Length = 251 Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 75/244 (30%), Positives = 113/244 (46%), Gaps = 4/244 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W + AI+L V ++GE ++ V+ +G G R G R PI Q GNL+ W + Sbjct: 1 MEWSEPAIVLSVAAFGESDLRTIVLAETHGAWHGLARGGAGRRGAPIWQEGNLINARWVA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGL-QSIVPLFRFLPEREPCLELYDMLNIFLN 119 RL + LG E++ A ++ L L L + LPERE + L L Sbjct: 61 RLPEQLGSISGELVHPAAAIAMADPLALAVLRAACAVAAGALPEREAHRGAFIRLARLLG 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 I V+ EL LL+ +G+GLDL+ C ++G +DL +VSP++G AV R + Sbjct: 121 GIGIAGTALPALVRFELELLRELGYGLDLSSCALSGAAEDLAFVSPRTGRAVARGAAGDW 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSL---KSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 A ++L LP+FL E+ D L + LT +FL + A R +L Sbjct: 181 APRLLKLPAFLLDEDAADDEADLAACRDGLALTGHFLARDAFGARHAPLPTARLGLYDRL 240 Query: 237 LELI 240 + Sbjct: 241 TRRL 244 >gi|294637609|ref|ZP_06715889.1| DNA repair protein RecO [Edwardsiella tarda ATCC 23685] gi|291089239|gb|EFE21800.1| DNA repair protein RecO [Edwardsiella tarda ATCC 23685] Length = 243 Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 43/234 (18%), Positives = 73/234 (31%), Gaps = 13/234 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L+ T GR + +S R + LQ + + W Sbjct: 5 WQ-RAFVLHARPYSETSLLLDTFTEGQGRVRLLAKGARSRRSQLKGALQPFTPLLIRWGG 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + A LS GL L R L + L+ + Sbjct: 64 KGEVKTLR---SAEAVSLALPLSGITLYSGLYVNELLARVLEQETCYSALFFDYLHCIQQ 120 Query: 121 HK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + EL LL +G+G+D C +G + + Sbjct: 121 LAGHSGSPEPVLRRFELALLAQLGYGIDFLHCAGSGEPVADGMTYRYREEKGFIASLVVD 180 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + D +L++A + T + AL+ + RE F Sbjct: 181 QHSFTGRDLKALASREFPDVATLRAAKRFT-----RMALKPYLGGKPLKSRELF 229 >gi|307132116|ref|YP_003884132.1| gap repair protein [Dickeya dadantii 3937] gi|306529645|gb|ADM99575.1| gap repair protein [Dickeya dadantii 3937] Length = 244 Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 77/237 (32%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ + GR + ++ R + LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLLLDLFSENEGRVRVLAKGARARRSSLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A LS L GL L R L L+ Sbjct: 60 WGGRGEVKTLRNAEP---VSLALPLSGPLLYSGLYVNELLTRVLELETDYSALFFDYLHC 116 Query: 118 LNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + EL LL+++G+G+D C +G + Sbjct: 117 LQQLAAASGSPEPALRRFELALLEHLGYGVDFLHCAGSGEPVADTMTYRYRAEKGFIASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + D D+L++A + T + AL+ + RE F Sbjct: 177 VVDNVSFTGRELQALASREFPDIDTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|194017652|ref|ZP_03056262.1| DNA repair protein RecO [Bacillus pumilus ATCC 7061] gi|194010552|gb|EDW20124.1| DNA repair protein RecO [Bacillus pumilus ATCC 7061] Length = 256 Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 73/179 (40%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + + I+L YGE N I+ ++TR++G+ R + + + + + Sbjct: 1 MLIKSEGIVLRTTDYGETNKIVTLLTREHGKIGVMARGAKKSNSRLSAISQPFLYGTFLI 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + LG + E++ES L Y L + E++P L+++L L Sbjct: 61 QSSTGLGTLQQGEMIESMRTIREDLFLTAYAAYMTELLDKGTEEKKPNPYLFELLLQSLR 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + I +E+ +L +G +L +CV G + S + G +C++ Sbjct: 121 HLNEGTDADVILFIVEVKMLSVMGMKPELDQCVHCGQKEGQFHFSIRDNGFICQNCFSK 179 >gi|238759684|ref|ZP_04620844.1| DNA repair protein recO [Yersinia aldovae ATCC 35236] gi|238702112|gb|EEP94669.1| DNA repair protein recO [Yersinia aldovae ATCC 35236] Length = 244 Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 81/243 (33%), Gaps = 14/243 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ T GR + + R + LQ + V Sbjct: 4 MEGWQ-RAFVLHGRPYSETSLMLDLFTEGEGRIRVLAKGARGRRSNLKGCLQPFTPLLVR 62 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A L+ S+ GL L R L + L+ Sbjct: 63 WAGRGEVKTLRSAEP---VSLALPLTGSMLYSGLYVNELLSRVLEHQTNYSALFFDYLHC 119 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L Q EL +L ++G+G+D C +G + Sbjct: 120 LQALAGSDGSPEYALRQFELAILAHLGYGVDFLHCAGSGEAVADTMTYRYREEKGFIASL 179 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 + + DA++L++A + T + AL+ + RE F Sbjct: 180 VVDHYSFTGRQLLALANREFPDAETLRAAKRFT-----RIALKPYLGGKPLKSRELFRQF 234 Query: 236 LLE 238 +++ Sbjct: 235 VIK 237 >gi|157693027|ref|YP_001487489.1| DNA repair protein RecO [Bacillus pumilus SAFR-032] gi|166918728|sp|A8FFB2|RECO_BACP2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|157681785|gb|ABV62929.1| DNA repair protein RecO [Bacillus pumilus SAFR-032] Length = 256 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 73/179 (40%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + + I+L YGE N I+ ++TR++G+ R + + + + + Sbjct: 1 MLIKSEGIVLRTTDYGETNKIVTLLTREHGKIGVMARGAKKSNSRLSAISQPFLYGTFLI 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + LG + E++ES L Y L + E++P L+++L L Sbjct: 61 QSSTGLGTLQQGEMIESMRTIREDLFLTAYAAYMTELLDKGTEEKKPNPYLFELLLQSLR 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + I +E+ +L +G +L +CV G + S + G +C++ Sbjct: 121 HLNEGTDADIILFIVEVKMLSVMGMKPELDQCVHCGQKEGQFHFSIRDNGFICQNCFSK 179 >gi|21958064|gb|AAM84873.1|AE013732_5 recO protein [Yersinia pestis KIM 10] gi|45437170|gb|AAS62722.1| DNA repair protein [Yersinia pestis biovar Microtus str. 91001] Length = 243 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 80/240 (33%), Gaps = 13/240 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L++ T GR + + R + LQ + V W Sbjct: 6 WQ-RAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVRWSG 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R A LS S+ GL L R L + L+ L Sbjct: 65 RGEVKTLRSAEP---VSLALPLSGSMLYSGLYVNELLSRVLEHQTSYSALFFDYLHCLQA 121 Query: 121 HKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 Q EL +L N+G+G+D C +G + + Sbjct: 122 LAGSDGSPEHALRQFELAMLANLGYGVDFLHCAGSGQPVSDTMTYRYREEKGFIASLVVD 181 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLLE 238 + DAD+L++A + T + AL+ + RE F +++ Sbjct: 182 HYSFTGRQLLALANREFPDADTLRAAKRFT-----RIALKPYLGGKPLKSRELFRQFVIK 236 >gi|51597204|ref|YP_071395.1| DNA repair protein RecO [Yersinia pseudotuberculosis IP 32953] gi|108808448|ref|YP_652364.1| DNA repair protein RecO [Yersinia pestis Antiqua] gi|108811371|ref|YP_647138.1| DNA repair protein RecO [Yersinia pestis Nepal516] gi|145598835|ref|YP_001162911.1| DNA repair protein RecO [Yersinia pestis Pestoides F] gi|149365388|ref|ZP_01887423.1| DNA repair protein [Yersinia pestis CA88-4125] gi|153948747|ref|YP_001400119.1| DNA repair protein RecO [Yersinia pseudotuberculosis IP 31758] gi|161484839|ref|NP_668622.2| DNA repair protein RecO [Yersinia pestis KIM 10] gi|161511351|ref|NP_993845.2| DNA repair protein RecO [Yersinia pestis biovar Microtus str. 91001] gi|162420369|ref|YP_001607937.1| DNA repair protein RecO [Yersinia pestis Angola] gi|165925301|ref|ZP_02221133.1| DNA repair protein RecO [Yersinia pestis biovar Orientalis str. F1991016] gi|165937188|ref|ZP_02225753.1| DNA repair protein RecO [Yersinia pestis biovar Orientalis str. IP275] gi|166008243|ref|ZP_02229141.1| DNA repair protein RecO [Yersinia pestis biovar Antiqua str. E1979001] gi|166212406|ref|ZP_02238441.1| DNA repair protein RecO [Yersinia pestis biovar Antiqua str. B42003004] gi|167399560|ref|ZP_02305084.1| DNA repair protein RecO [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421237|ref|ZP_02312990.1| DNA repair protein RecO [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423802|ref|ZP_02315555.1| DNA repair protein RecO [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467392|ref|ZP_02332096.1| DNA repair protein RecO [Yersinia pestis FV-1] gi|170023437|ref|YP_001719942.1| DNA repair protein RecO [Yersinia pseudotuberculosis YPIII] gi|186896301|ref|YP_001873413.1| DNA repair protein RecO [Yersinia pseudotuberculosis PB1/+] gi|218929792|ref|YP_002347667.1| DNA repair protein RecO [Yersinia pestis CO92] gi|229838283|ref|ZP_04458442.1| gap repair protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895521|ref|ZP_04510692.1| gap repair protein [Yersinia pestis Pestoides A] gi|229898847|ref|ZP_04513992.1| gap repair protein [Yersinia pestis biovar Orientalis str. India 195] gi|229901621|ref|ZP_04516743.1| gap repair protein [Yersinia pestis Nepal516] gi|270489810|ref|ZP_06206884.1| DNA repair protein RecO [Yersinia pestis KIM D27] gi|294504511|ref|YP_003568573.1| DNA repair protein RecO [Yersinia pestis Z176003] gi|20139503|sp|Q8ZD70|RECO_YERPE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|61214871|sp|Q667V3|RECO_YERPS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361499|sp|Q1C553|RECO_YERPA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361500|sp|Q1CKE2|RECO_YERPN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166221917|sp|A4TKX6|RECO_YERPP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166918733|sp|A7FFU1|RECO_YERP3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238687296|sp|A9R404|RECO_YERPG RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238688564|sp|B1JRC9|RECO_YERPY RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238691450|sp|B2KA45|RECO_YERPB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|51590486|emb|CAH22126.1| DNA repair protein [Yersinia pseudotuberculosis IP 32953] gi|108775019|gb|ABG17538.1| DNA replication and repair protein RecO [Yersinia pestis Nepal516] gi|108780361|gb|ABG14419.1| DNA replication and repair protein RecO [Yersinia pestis Antiqua] gi|115348403|emb|CAL21339.1| DNA repair protein [Yersinia pestis CO92] gi|145210531|gb|ABP39938.1| DNA replication and repair protein RecO [Yersinia pestis Pestoides F] gi|149291801|gb|EDM41875.1| DNA repair protein [Yersinia pestis CA88-4125] gi|152960242|gb|ABS47703.1| DNA repair protein RecO [Yersinia pseudotuberculosis IP 31758] gi|162353184|gb|ABX87132.1| DNA repair protein RecO [Yersinia pestis Angola] gi|165915051|gb|EDR33663.1| DNA repair protein RecO [Yersinia pestis biovar Orientalis str. IP275] gi|165922908|gb|EDR40059.1| DNA repair protein RecO [Yersinia pestis biovar Orientalis str. F1991016] gi|165992625|gb|EDR44926.1| DNA repair protein RecO [Yersinia pestis biovar Antiqua str. E1979001] gi|166206337|gb|EDR50817.1| DNA repair protein RecO [Yersinia pestis biovar Antiqua str. B42003004] gi|166960726|gb|EDR56747.1| DNA repair protein RecO [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167052064|gb|EDR63472.1| DNA repair protein RecO [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057972|gb|EDR67718.1| DNA repair protein RecO [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749971|gb|ACA67489.1| DNA repair protein RecO [Yersinia pseudotuberculosis YPIII] gi|186699327|gb|ACC89956.1| DNA repair protein RecO [Yersinia pseudotuberculosis PB1/+] gi|229681550|gb|EEO77644.1| gap repair protein [Yersinia pestis Nepal516] gi|229688395|gb|EEO80466.1| gap repair protein [Yersinia pestis biovar Orientalis str. India 195] gi|229694649|gb|EEO84696.1| gap repair protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701327|gb|EEO89355.1| gap repair protein [Yersinia pestis Pestoides A] gi|262362497|gb|ACY59218.1| DNA repair protein RecO [Yersinia pestis D106004] gi|262366498|gb|ACY63055.1| DNA repair protein RecO [Yersinia pestis D182038] gi|270338314|gb|EFA49091.1| DNA repair protein RecO [Yersinia pestis KIM D27] gi|294354970|gb|ADE65311.1| DNA repair protein RecO [Yersinia pestis Z176003] gi|320016073|gb|ADV99644.1| gap repair protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 241 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 80/240 (33%), Gaps = 13/240 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L++ T GR + + R + LQ + V W Sbjct: 4 WQ-RAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVRWSG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R A LS S+ GL L R L + L+ L Sbjct: 63 RGEVKTLRSAEP---VSLALPLSGSMLYSGLYVNELLSRVLEHQTSYSALFFDYLHCLQA 119 Query: 121 HKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 Q EL +L N+G+G+D C +G + + Sbjct: 120 LAGSDGSPEHALRQFELAMLANLGYGVDFLHCAGSGQPVSDTMTYRYREEKGFIASLVVD 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLLE 238 + DAD+L++A + T + AL+ + RE F +++ Sbjct: 180 HYSFTGRQLLALANREFPDADTLRAAKRFT-----RIALKPYLGGKPLKSRELFRQFVIK 234 >gi|109900011|ref|YP_663266.1| DNA repair protein RecO [Pseudoalteromonas atlantica T6c] gi|119361472|sp|Q15PH6|RECO_PSEA6 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|109702292|gb|ABG42212.1| DNA replication and repair protein RecO [Pseudoalteromonas atlantica T6c] Length = 240 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 76/229 (33%), Gaps = 11/229 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQ 64 +L R+Y E + ++ + T + G+ V+ + + + +LQ + + R Sbjct: 8 GYVLHRRAYRETSFLVNIFTLENGKVSAVVKGVRGSKSDKKSLLQPFQPLLIGVSGRSEL 67 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + L+ L L R L + P E++ + ++ Sbjct: 68 KNLQQVEST---GAMIRLAGQALYCALYLNEVLNRVLADEIPHPEIFVLYQQSMHALVAQ 124 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 + + EL LL +G+G+DLT TG C G Sbjct: 125 TNFEPVLRSFELGLLDALGYGIDLTHDADTGQPVADNGYYRIVPELGCVYQGDIRLSGCY 184 Query: 185 VLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHL-LRENF 232 S L + D DSL +A +T + L + L RE F Sbjct: 185 SGQSLLNVASENWDKDSLLAAKHIT-----RTTLGELLGSKPLMSRELF 228 >gi|212710661|ref|ZP_03318789.1| hypothetical protein PROVALCAL_01727 [Providencia alcalifaciens DSM 30120] gi|212686742|gb|EEB46270.1| hypothetical protein PROVALCAL_01727 [Providencia alcalifaciens DSM 30120] Length = 241 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 77/239 (32%), Gaps = 13/239 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 WQ A +L R Y E +++++ T G+ + + +R + LQ + + W Sbjct: 4 WQ-RAFVLHSRPYSETSLLIDFFTEGEGKIRLLAKGARRNRSPLRGCLQPFTPLLIRWSG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + A LS ++ GL R + P L+ L Sbjct: 63 KGEIKTLINADP---VSLALPLSGTVLYSGLYLNELTARVIEFGTPYSSLFFDYLNCLQV 119 Query: 121 HK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 Q EL LL +G+G+D C +G + Sbjct: 120 LAGSERTPESALRQFELALLSYLGYGVDFLHCAGSGEPVTDAMTYRYREEKGFIGSLVID 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 E + DAD+LK+A + T + AL+ + RE F ++ Sbjct: 180 QLTFTGKQLKALAEREFPDADTLKAAKRFT-----RIALKPYLGGKPLKSRELFRQFII 233 >gi|251788700|ref|YP_003003421.1| DNA repair protein RecO [Dickeya zeae Ech1591] gi|247537321|gb|ACT05942.1| DNA repair protein RecO [Dickeya zeae Ech1591] Length = 244 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 79/237 (33%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ + GR + ++ R + LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLLLDLFSEDEGRVRVLAKGARARRSSLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A LS SL GL L R L L+ Sbjct: 60 WGGRGEVKTLRNAEP---VSLALPLSGSLLYSGLYVNELLTRVLELETNYSALFFDYLHC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + + EL LL+++G+G+D C +G + Sbjct: 117 LQQLAAANGSPEPALRRFELALLEHLGYGVDFLHCAGSGEPVADTMTYRYRSEKGFIASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + D ++L++A + T + AL+ + RE F Sbjct: 177 VVDNVSFTGRELQALASREFPDIETLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|59712692|ref|YP_205468.1| DNA repair protein RecO [Vibrio fischeri ES114] gi|197335983|ref|YP_002156884.1| DNA repair protein RecO [Vibrio fischeri MJ11] gi|67461219|sp|Q5E316|RECO_VIBF1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238690260|sp|B5FAG8|RECO_VIBFM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|59480793|gb|AAW86580.1| gap repair protein [Vibrio fischeri ES114] gi|197317473|gb|ACH66920.1| DNA repair protein RecO [Vibrio fischeri MJ11] Length = 238 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 80/237 (33%), Gaps = 12/237 (5%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R + +LQA + + W + + Sbjct: 9 FVLHRRPYSESSLILDVFSEEYGRLSIISKGARSKRSNLKGVLQAFTPLLMKWSGKGS-- 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + L+ + L R + + P L+ L + Sbjct: 67 -MRTLRQAETISLGIPLTGINLYSAMYINELLVRVVEQETPYPALFLDYLTALTELAQST 125 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL +G+G+D C +G + Sbjct: 126 NPEPALRRFELALLSAMGYGVDFLHCAGSGEMVSPEMTYRYREQQGFMASIRHDPLMSFK 185 Query: 186 LPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLLELI 240 + E + + LK+A + T + AL+ + RE FL + ++ Sbjct: 186 GNELIAISERRFTTPEQLKAAKRFT-----RIALKPYLGGKPLKSRELFLPRTRSIL 237 >gi|170767492|ref|ZP_02901945.1| DNA repair protein RecO [Escherichia albertii TW07627] gi|170123826|gb|EDS92757.1| DNA repair protein RecO [Escherichia albertii TW07627] Length = 243 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 82/237 (34%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 2 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R + A LS GL L R L EL+ Sbjct: 61 FGGRGE---IKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHC 117 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + EL LL ++G+G++ C +G D + Sbjct: 118 IQSLAGATGTPEPALRRFELALLGHLGYGVNFMHCAGSGEPVDDTMTYRYREEKGFIASV 177 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + DAD+L++A + T + AL+ + RE F Sbjct: 178 VIDNKTFTGRQLKALHAREFPDADTLRAAKRFT-----RMALKPYLGGKPLKSRELF 229 >gi|271501619|ref|YP_003334645.1| DNA repair protein RecO [Dickeya dadantii Ech586] gi|270345174|gb|ACZ77939.1| DNA repair protein RecO [Dickeya dadantii Ech586] Length = 244 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 79/237 (33%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ + GR + ++ R + LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLLLDLFSENEGRVRVLAKGARARRSSLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A LS SL GL L R L L+ Sbjct: 60 WGGRGEVKTLRNAEP---VSLALPLSGSLLYSGLYVNELLTRVLELETNYSALFFDYLHC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + + EL LL+++G+G+D C +G + Sbjct: 117 LQQLAGTNGSPEPALRRFELALLEHLGYGVDFLHCAGSGEPVADTMTYRYRSEKGFIASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + D D+L++A + T + AL+ + RE F Sbjct: 177 VVDNVSFTGRELQALASREFPDTDTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|308187804|ref|YP_003931935.1| DNA repair protein recO (Recombination protein O) [Pantoea vagans C9-1] gi|308058314|gb|ADO10486.1| DNA repair protein recO (Recombination protein O) [Pantoea vagans C9-1] Length = 259 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 85/238 (35%), Gaps = 16/238 (6%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L++ + GR + +S R + LQ + V Sbjct: 18 MEGWQ-RAFVLHSRPFSETSLLLDLFSENEGRVRVLAKGARSRRSQLKGALQPFTPLLVR 76 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A LS GL + R L P EL+ Sbjct: 77 WSGRGDVKTLRNAEA---VSLALPLSGITLYCGLYVNELVSRVLQPESPFQELFFDYLNC 133 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRSV 175 L + EL LL ++G+G+D C +G D + S + S+ Sbjct: 134 LQALASTHGKPEPALRRFELALLGHLGYGVDFLHCAGSGEPVSDDMTYSYREERGFIASL 193 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + L E + DAD+L++A + T + AL+ + +E F Sbjct: 194 VVNQRSFTGRELHALC-EREFPDADTLRAAKRFT-----RIALKPYLGGKPLKSQELF 245 >gi|322834125|ref|YP_004214152.1| DNA repair protein RecO [Rahnella sp. Y9602] gi|321169326|gb|ADW75025.1| DNA repair protein RecO [Rahnella sp. Y9602] Length = 245 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 75/237 (31%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ T GR + + R + LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLMLDLFTEGQGRVRILAKGARGRRSNLKGCLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A LS + GL + R L + L+ Sbjct: 60 WSGRGEVKTLRNAEP---VSLALPLSGLMLYSGLYVNELVSRVLEQEANYSSLFFDYLNC 116 Query: 118 LNCHKI-PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L Q EL LL ++G+G+D C +G + Sbjct: 117 LQNLASASGSPEYALRQFELSLLHHLGYGVDFLHCAGSGEEVSDTMTYRYREEKGFIASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + D +L++A + T + AL+ + RE F Sbjct: 177 VIDNSSFTGRDLKALASREFPDVSTLRAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|240949698|ref|ZP_04754033.1| DNA repair protein RecO [Actinobacillus minor NM305] gi|240295956|gb|EER46632.1| DNA repair protein RecO [Actinobacillus minor NM305] Length = 241 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 80/239 (33%), Gaps = 13/239 (5%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 WQ +L R Y E ++++++ T YGR + + R + +LQ + + W Sbjct: 5 QWQ-RGFVLHKREYSETSLLVDLFTENYGRITLLAKGARRPRSPLKALLQPFTPLLLRWS 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + +V + +++ G L R L + EL+ + Sbjct: 64 GKGDLKV---LTKVEAAALTLPMNTKALYSGFYINEVLVRVLENQTAYQELFHHYLQCVT 120 Query: 120 CHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + I E +LK +G+G+D T C+ TG+ D L Sbjct: 121 HLALRSEELEPILRTFEFHVLKALGYGVDFTHCMATGLEVDPEMTYQFRENEG-FIASLL 179 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKL 236 + L S++ A + + AL+ + RE F L Sbjct: 180 QNNLSFLGKDLLAFAALDFSEKSVQQAAKR----FTRIALKPYLGSQPLKSRELFQSIL 234 >gi|161702946|ref|YP_303133.2| DNA repair protein RecO [Ehrlichia canis str. Jake] Length = 244 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 71/242 (29%), Positives = 123/242 (50%), Gaps = 8/242 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD I++ +R YG+ II+ + T+++G G R + + LQ G+ V V W + Sbjct: 1 MRWQDQGIVIAIRKYGDDQIIISIFTQKHGLKKGLARYQKKTIHR--LQIGDHVNVTWSA 58 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGL-QSIVPLFRFLPEREPCLELYDMLNIFLN 119 +L NLG F++E+++S + ++L + L + LPE E +Y+ L+IF+N Sbjct: 59 KLISNLGYFKYEIIKSTLHHYIHNNLKTMCIAFFTSILDQVLPENEENYTIYNHLDIFMN 118 Query: 120 CH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 ++ +EL LL +GFGLDL++C V ++L+++SPK+G A+ ++VGLP Sbjct: 119 SVQNKDVNWQIKYLTLELTLLSELGFGLDLSQCAVNNTNENLIFISPKTGKAISQTVGLP 178 Query: 179 YAE----KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 Y + +L + K + +T YFL K+ L I R+ + Sbjct: 179 YKKSLLPLPPLLYNVYNNYTYKYSKTDFKVSLNVTGYFLKKHFLTEKNITLIKYRDEIIK 238 Query: 235 KL 236 + Sbjct: 239 LI 240 >gi|300717985|ref|YP_003742788.1| DNA repair protein [Erwinia billingiae Eb661] gi|299063821|emb|CAX60941.1| DNA repair protein [Erwinia billingiae Eb661] Length = 244 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 79/237 (33%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ + YGR + + R + LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLLLDLFSENYGRIRVLAKGARGKRSSLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A LS GL L R L + EL+ Sbjct: 60 WGGRGEVKTLRGAEP---ISLALPLSGLTLYCGLYVNELLSRVLEQETAFTELFFDYLYC 116 Query: 118 LNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + + EL +L ++G+G+D C +G + Sbjct: 117 LQALAAVTGSPEPALRRFELAMLGHLGYGVDFMHCAGSGEEVADGMTYTYRAEKGFIASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + +E D D+L++A + T + AL+ + +E F Sbjct: 177 VMGNNTFTGRQLRALEERSFPDIDTLRAAKRFT-----RIALKPYLGGKPLKSQELF 228 >gi|304398618|ref|ZP_07380490.1| DNA repair protein RecO [Pantoea sp. aB] gi|304353829|gb|EFM18204.1| DNA repair protein RecO [Pantoea sp. aB] Length = 242 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 86/238 (36%), Gaps = 16/238 (6%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L++ + GR + +S R + LQ + V Sbjct: 1 MEGWQ-RAFVLHSRPFSETSLLLDLFSESEGRVRVLAKGARSRRSNLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A LS GL + R L + P EL+ Sbjct: 60 WSGRGEVKTLRNAEA---VSLALPLSGITLYCGLYVNELVSRVLQQESPFPELFFDYLNC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRSV 175 L + EL LL ++G+G+D C +G D + S + S+ Sbjct: 117 LQALASTHGKPEPALRRFELALLGHLGYGVDFLHCAGSGEPVSDDMTYSYREERGFIASL 176 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + L E + DAD+L++A + T + AL+ + +E F Sbjct: 177 VVNNRSFTGRELHALC-EREFPDADTLRAAKRFT-----RIALKPYLGGKPLKSQELF 228 >gi|261345439|ref|ZP_05973083.1| DNA repair protein RecO [Providencia rustigianii DSM 4541] gi|282566486|gb|EFB72021.1| DNA repair protein RecO [Providencia rustigianii DSM 4541] Length = 243 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 79/235 (33%), Gaps = 15/235 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L+ T G+ + + +R + LQ + + W Sbjct: 4 WQ-RAFVLHSRPYSETSLLLDFFTEGEGKIRLLAKGARRNRSPLRGCLQPFTPLLIRWGG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + A LS ++ GL R L P L+ L Sbjct: 63 KGEIKTLINADP---VSLALPLSGTVLYSGLYLNELTARVLEFGTPYSALFFDYLSCLQV 119 Query: 121 HK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRSVGLP 178 Q EL LL +G+G+D C +G D + + S+ + Sbjct: 120 LAGSERTPESALRQFELALLSYLGYGVDFLHCAGSGEPVSDTMTYRYREEKGFIGSLVID 179 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 L DAD+LK+A + T + AL+ + RE F Sbjct: 180 QFSFTGKQLKALA-SRDFPDADTLKAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|257464704|ref|ZP_05629075.1| DNA repair protein RecO [Actinobacillus minor 202] gi|257450364|gb|EEV24407.1| DNA repair protein RecO [Actinobacillus minor 202] Length = 241 Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 80/239 (33%), Gaps = 13/239 (5%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 WQ +L R Y E ++++++ T YGR + + R + +LQ + + W Sbjct: 5 QWQ-RGFVLHKREYSETSLLVDLFTENYGRITLLAKGARRPRSPLKALLQPFTPLLLRWS 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + +V + +++ G L R L + EL+ + Sbjct: 64 GKGDLKV---LTKVEAAALTLPMNTKALYSGFYINEVLVRVLENQTAYQELFHHYLQCVT 120 Query: 120 CHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + I E +LK +G+G+D T C+ TG+ D L Sbjct: 121 HLALRSEELEPILRTFEFHVLKALGYGVDFTHCMATGLDVDPEMTYQFRENEG-FIASLL 179 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKL 236 + L S++ A + + AL+ + RE F L Sbjct: 180 QNNLSFLGKDLLAFAALDFSEKSVQQAAKR----FTRIALKPYLGSQPLKSRELFQSIL 234 >gi|88812351|ref|ZP_01127601.1| Recombination protein O, RecO [Nitrococcus mobilis Nb-231] gi|88790358|gb|EAR21475.1| Recombination protein O, RecO [Nitrococcus mobilis Nb-231] Length = 249 Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 74/235 (31%), Gaps = 11/235 (4%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRL 62 + A +L R+Y E + I E+ T ++GR R +S R + +LQ + V+W++R Sbjct: 11 EPAYVLHRRAYRESSAIAELFTAEHGRLGVVARGVRSSRSRWRALLQPFTPLSVSWQARG 70 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 S + G L R L +P EL+ + Sbjct: 71 DLGTLTDVELQWRSTLPT---GRRLVSGFYLNELLLRVLQREDPYPELFQCYAGAVLMLA 127 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E LL +G+GL L+ + W + Sbjct: 128 SRGAEQPLLRCFERDLLAAMGYGLLLSHDADGSPIEPQRWYRYEIDKGAVPVTAPRGRLV 187 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKL 236 + +A A Q L + AL+ ++ RE + L Sbjct: 188 VQGATLSALASGVFPNAGVEVQARQ-----LMRAALRPHVGERPLKSRELYAQYL 237 >gi|238788222|ref|ZP_04632017.1| DNA repair protein recO [Yersinia frederiksenii ATCC 33641] gi|238723809|gb|EEQ15454.1| DNA repair protein recO [Yersinia frederiksenii ATCC 33641] Length = 241 Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 81/243 (33%), Gaps = 14/243 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ T GR + + R + LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A LS S+ GL L R L + L+ Sbjct: 60 WTGRGEVKTLRSAEP---VSLALPLSGSMLYSGLYVNELLSRVLEHQTNYSALFFDYLHC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L Q EL +L ++G+G+D C +G + Sbjct: 117 LQSLAGSDGSPEYALRQFELAILAHLGYGVDFLHCAGSGQPVSDSMTYRYREEKGFIASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 + + DAD+L++A + T + AL+ + RE F Sbjct: 177 VVDHYSFTGRQLLALANREFPDADTLRAAKRFT-----RIALKPYLGGKPLKSRELFRQF 231 Query: 236 LLE 238 +++ Sbjct: 232 VIK 234 >gi|238762799|ref|ZP_04623768.1| DNA repair protein recO [Yersinia kristensenii ATCC 33638] gi|238699104|gb|EEP91852.1| DNA repair protein recO [Yersinia kristensenii ATCC 33638] Length = 241 Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 48/243 (19%), Positives = 81/243 (33%), Gaps = 14/243 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ T GR + + R + LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A L+ S+ GL L R L + L+ Sbjct: 60 WTGRGEVKTLRSAEP---VSLALPLTGSMLYSGLYVNELLARVLEHQTNYSALFFDYLHC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L Q EL +L ++G+G+D C +G + Sbjct: 117 LQSLAGSDGSPEYALRQFELAILAHLGYGVDFLHCAGSGQPVSDSMTYRYREEKGFIASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 + + DAD+L++A + T + AL+ + RE F Sbjct: 177 VVDHYSFTGRQLLALANREFPDADTLRAAKRFT-----RIALKPYLGGKPLKSRELFRQF 231 Query: 236 LLE 238 +++ Sbjct: 232 VIK 234 >gi|213161853|ref|ZP_03347563.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 221 Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 73/218 (33%), Gaps = 8/218 (3%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 YSGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLNC 116 Query: 118 LNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + EL LL ++G+G++ T C +G D + Sbjct: 117 IQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGERVDDTMTYRYREEKGFFASV 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLN 214 + + + D D+L++A + T L Sbjct: 177 VIDNNTFTGRHLKALEAREFPDVDTLRAAKRFTRMALK 214 >gi|123441365|ref|YP_001005352.1| DNA repair protein RecO [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166221916|sp|A1JKK5|RECO_YERE8 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|122088326|emb|CAL11117.1| DNA repair protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 241 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 48/243 (19%), Positives = 81/243 (33%), Gaps = 14/243 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ T GR + + R + LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A L+ S+ GL L R L + L+ Sbjct: 60 WTGRGEVKTLRSAEP---VSLALPLTGSMLYSGLYVNELLSRVLEHQTNYSALFFDYLHC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L Q EL +L ++G+G+D C +G + Sbjct: 117 LQSLAGSDGSPEYALRQFELAILAHLGYGVDFLHCAGSGQPVSDTMTYRYREEKGFIASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 + + DAD+L++A + T + AL+ + RE F Sbjct: 177 VVDHYSFTGRQLLALANREFPDADTLRAAKRFT-----RIALKPYLGGKPLKSRELFRQF 231 Query: 236 LLE 238 +++ Sbjct: 232 VIK 234 >gi|134095251|ref|YP_001100326.1| DNA repair protein RecO [Herminiimonas arsenicoxydans] gi|133739154|emb|CAL62203.1| DNA repair protein recO (Recombination protein O) [Herminiimonas arsenicoxydans] Length = 284 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 70/235 (29%), Gaps = 12/235 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRLA 63 +L Y E ++I++V TR +GR + + +++ +LQ + V+W + Sbjct: 56 PGFVLHSYPYKETSLIVDVFTRDHGRIALVAKGAKRPHSKLRGVLQTFQPLSVSWSGKAE 115 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L S L G L + L + L++ LN Sbjct: 116 VRT---LTSAEWVGGLLPLEKSALLCGFYLNELLVKLLARDDSHPALFNHYVSALNQLAH 172 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKC-VVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + + E LLK G D C + + Sbjct: 173 DEPAAIVLRKFERALLKESGVSGDWKICTATRNPLLGGINYVVDPERGPRPARPADTWPH 232 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN-IIHCHLLRENFLGKL 236 + ++E DA + FL ++ L H+ R+ + L Sbjct: 233 VAGKTLLDMEKEDYSDAATQMQ-----SKFLMRFLLAHHLNGAPLNTRQILIDLL 282 >gi|17545784|ref|NP_519186.1| DNA repair protein RecO [Ralstonia solanacearum GMI1000] gi|20139464|sp|Q8Y0H9|RECO_RALSO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|17428078|emb|CAD14767.1| probable dna repair protein reco (recombination protein o) [Ralstonia solanacearum GMI1000] gi|299067033|emb|CBJ38228.1| DNA repair protein recO (Recombination protein O) [Ralstonia solanacearum CMR15] Length = 272 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 73/235 (31%), Gaps = 9/235 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSR 61 Q A +L Y E ++I++V TR +GR + + + +LQ + ++W R Sbjct: 41 QQPAFVLHSYPYRETSLIIDVFTRDHGRIALVAKGAKRPHSALRAVLQTFQPLSLSWSGR 100 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 L L G L +F+ + L+ LN Sbjct: 101 GEVKT---LTRAEWVGGMLPLGGEGLLSGFYLNELLVKFVAREDGHPVLFSHYVETLNKL 157 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS-VGLPYA 180 + E +LL+ GF L +CV Q + R+ P + Sbjct: 158 AHGEPVAFTLRAFERVLLRETGFAAQLDRCVDGEPVQPDGDYVYHPERGIRRALPSDPSS 217 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 +L + L E + + + FL Y L R+ + Sbjct: 218 WPVLRGQTLLDMERDDYSRPATATQSRSLMRFLLHYHL---HGTPLSTRQILIDL 269 >gi|149910153|ref|ZP_01898799.1| DNA repair protein RecO [Moritella sp. PE36] gi|149806739|gb|EDM66703.1| DNA repair protein RecO [Moritella sp. PE36] Length = 242 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 78/236 (33%), Gaps = 12/236 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQ 64 A +L R + E +++++ T G+ R G+ + ILQ L+ + + + Sbjct: 6 AFVLHRRPFKESSLLIDFFTINDGKISLVGRAGRGRKNSQSAILQPFTLLNIAYAGKGGL 65 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 V S LS L+R L + EL+ L Sbjct: 66 KSMRQVEAVSNSLP---LSGRHLYASFYLNELLYRLLASEQANPELFSHYQNALLALAKQ 122 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVV-TGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + + + E L++ +G+ L+ C + S+ Sbjct: 123 QPLEPLLREFEFNLMQCLGYIGALSYCADTMDAVFPERMYKYVPHVGIVPSIYKVAVGHS 182 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLLE 238 + L E++ + D+L +A + + L + + RE F+ K L+ Sbjct: 183 FLGADLLAFEQRQFNQDNLAAAKRFC-----RQMLLPYLGNKPLKSRELFINKPLK 233 >gi|238784189|ref|ZP_04628202.1| DNA repair protein recO [Yersinia bercovieri ATCC 43970] gi|238714898|gb|EEQ06897.1| DNA repair protein recO [Yersinia bercovieri ATCC 43970] Length = 241 Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 80/241 (33%), Gaps = 15/241 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L++ T GR + + R + LQ + V W Sbjct: 4 WQ-RAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVRWTG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R A LS S+ GL L R L + L+ L Sbjct: 63 RGEVKTLRSAEP---VSLALPLSGSMLYSGLYVNELLSRVLEHQTNYSALFFDYLHCLQS 119 Query: 121 HKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 Q EL +L ++G+G+D C +G L Sbjct: 120 LAGSDGTPEYALRQFELAILAHLGYGVDFLHCAGSGQPVADTMTYRYRE-EKGFIASLVI 178 Query: 180 AEKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 L + DAD+L++A + T + AL+ + RE F ++ Sbjct: 179 DHYSFTGRQLLALANREFPDADTLRAAKRFT-----RIALKPYLGGKPLKSRELFRQFVI 233 Query: 238 E 238 + Sbjct: 234 K 234 >gi|56421021|ref|YP_148339.1| DNA repair protein RecO [Geobacillus kaustophilus HTA426] gi|261418496|ref|YP_003252178.1| DNA repair protein RecO [Geobacillus sp. Y412MC61] gi|319767543|ref|YP_004133044.1| DNA repair protein RecO [Geobacillus sp. Y412MC52] gi|61214670|sp|Q5KX15|RECO_GEOKA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|56380863|dbj|BAD76771.1| DNA repair protein (recombination protein O) [Geobacillus kaustophilus HTA426] gi|261374953|gb|ACX77696.1| DNA repair protein RecO [Geobacillus sp. Y412MC61] gi|317112409|gb|ADU94901.1| DNA repair protein RecO [Geobacillus sp. Y412MC52] Length = 262 Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 71/184 (38%), Gaps = 1/184 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ +AI++ YGE N I+ + TR++G+ R + + L ++ Sbjct: 1 MFETCEAIVMRTVDYGETNKIVTLFTREWGKVAAMARGAKKPSSRLSAVTQPLSYGHYVI 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R ++ +G + E+++S A Y + + + E++ L+++L L Sbjct: 61 RRSRGVGVLHQGELIDSMRALREDLFAAAYAVYIVELTDKSTEEQKRNPYLFELLLQTLQ 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + E+ +L +G L +C G T+ S K G +C Sbjct: 121 YMSEGRDLEILTFIYEMKMLAVLGIPPVLDRCARCGATEGRFSFSVKEAGFLCHRCEASD 180 Query: 180 AEKM 183 + Sbjct: 181 PHRF 184 >gi|152980172|ref|YP_001353062.1| DNA repair protein RecO [Janthinobacterium sp. Marseille] gi|151280249|gb|ABR88659.1| RecO DNA repair protein [Janthinobacterium sp. Marseille] Length = 287 Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 74/234 (31%), Gaps = 10/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRLA 63 +L Y E ++I++V +R +GR + + +++ +LQ + V W + Sbjct: 59 PGFVLHSYPYKETSLIVDVFSRDHGRIALVAKGAKRPHSKLRGVLQTFQPLSVGWSGKAE 118 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L S L G L + L +P L+D LN Sbjct: 119 VRT---LTAAEWVGGLLPLEKSALLCGFYLNELLVKLLARDDPHPALFDHYVSALNQLAH 175 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + + E LLK G D C +G L + R Sbjct: 176 DEPAPIVLRKFERALLKETGVASDWRVCTASGKAIVLEQIYVLDPERGPRPARPADVWPR 235 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN-IIHCHLLRENFLGKL 236 + + L E + ++ + FL ++ L H+ R+ + L Sbjct: 236 VSGKTLLDMENEDYTDTQTQTQSK----FLMRFLLAHHLNGAPLNTRQILIDLL 285 >gi|297529348|ref|YP_003670623.1| DNA repair protein RecO [Geobacillus sp. C56-T3] gi|297252600|gb|ADI26046.1| DNA repair protein RecO [Geobacillus sp. C56-T3] Length = 262 Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 70/184 (38%), Gaps = 1/184 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ +AI++ YGE N I+ + TR++G+ R + + L ++ Sbjct: 1 MFETCEAIVMRTVDYGETNKIVTLFTREWGKVAAMARGAKKPSSRLSAVTQPLSYGHYVI 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R ++ +G + E+++S A Y + + + E++ L+++L L Sbjct: 61 RRSRGVGVLHQGELIDSMRALREDLFAAAYAVYIVELTDKSTEEQKRNPYLFELLLQTLQ 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + E +L +G L +C G T+ S K G +C Sbjct: 121 YMSEGRDLEILTFIYETKMLAVLGIPPVLDRCARCGATEGRFSFSVKEAGFLCHRCEASD 180 Query: 180 AEKM 183 + Sbjct: 181 PHRF 184 >gi|238750384|ref|ZP_04611885.1| DNA repair protein recO [Yersinia rohdei ATCC 43380] gi|238711315|gb|EEQ03532.1| DNA repair protein recO [Yersinia rohdei ATCC 43380] Length = 241 Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 82/243 (33%), Gaps = 14/243 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ T GR + + R + LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A LS S+ GL L R L ++ L+ Sbjct: 60 WVGRGEIKTLRSAEP---VSLALPLSGSMLYSGLYVNELLSRVLEQQTNYSALFFDYLHC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L Q EL +L ++G+G+D C +G + Sbjct: 117 LQSLAGSDGSPEYALRQFELAILAHLGYGVDFLHCAGSGQPVSDSMTYRYREEKGFIASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 + + DAD+L++A + T + AL+ + RE F Sbjct: 177 VVDHYSFTGRQLLALANREFPDADTLRAAKRFT-----RIALKPYLGGKPLKSRELFRQF 231 Query: 236 LLE 238 +++ Sbjct: 232 VIK 234 >gi|238793771|ref|ZP_04637392.1| DNA repair protein recO [Yersinia intermedia ATCC 29909] gi|238726835|gb|EEQ18368.1| DNA repair protein recO [Yersinia intermedia ATCC 29909] Length = 241 Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 51/241 (21%), Positives = 87/241 (36%), Gaps = 15/241 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L++ T GR + + R + LQ + V W Sbjct: 4 WQ-RAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVRWAG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R A L+ S+ GL L R L + L+ L Sbjct: 63 RGEVKTLRSAEP---VSLALPLTGSMLYSGLYVNELLSRVLEHQTNYSALFFDYLHCLQA 119 Query: 121 HKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRSVGLP 178 Q EL +L ++G+G+D C +G D + + S+ + Sbjct: 120 LAGSDGSPEYALRQFELAILAHLGYGVDFLHCAGSGQPISDTMTYRYREEKGFIASLVVD 179 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 + S L + DAD+L++A + T + AL+ + RE F ++ Sbjct: 180 HYSFTGRQLSALA-NREFPDADTLRAAKRFT-----RIALKPYLGGKPLKSRELFRQFVI 233 Query: 238 E 238 + Sbjct: 234 K 234 >gi|317049178|ref|YP_004116826.1| DNA repair protein RecO [Pantoea sp. At-9b] gi|316950795|gb|ADU70270.1| DNA repair protein RecO [Pantoea sp. At-9b] Length = 242 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 53/238 (22%), Positives = 85/238 (35%), Gaps = 16/238 (6%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ + GR + +S R + LQ + V Sbjct: 1 MEGWQ-RAFVLHSRPYSETSLLLDLFSESEGRVRVLAKGARSRRSQLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A LS GL L R L + P +L+ Sbjct: 60 WGGRGEVKTLRNAEA---VSLALPLSGITLYCGLYVNELLSRVLEQEIPFSDLFFDYLNC 116 Query: 118 LNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT-GVTQDLLWVSPKSGGAVCRSV 175 + + EL LL ++G+G+D C + D + S + S+ Sbjct: 117 IQALAAASGTPEPALRRFELALLGHLGYGVDFLHCAGSGEEVDDGMTYSYREEKGFIASL 176 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + LW E DADSL++A + T + AL+ + +E F Sbjct: 177 VVNQRSFTGRQLRALW-ERDFPDADSLRAAKRFT-----RMALKPYLGGKPLKSQELF 228 >gi|58617232|ref|YP_196431.1| DNA repair protein RecO [Ehrlichia ruminantium str. Gardel] gi|58416844|emb|CAI27957.1| Putative DNA repair protein recO [Ehrlichia ruminantium str. Gardel] Length = 244 Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats. Identities = 63/242 (26%), Positives = 117/242 (48%), Gaps = 8/242 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD I++ +R Y + +I+ V+T+++G G + + + LQ G+ + V W + Sbjct: 1 MRWQDQGIVIAIRKYCDNQVIISVLTKKHGLKKGLTKYYKKTINR--LQIGDYINVTWSA 58 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL-- 118 RL NLG F++E+++S ++++L L + + + Sbjct: 59 RLISNLGYFKYELIKSTIYYYMTNNLQTLCLAFFTFILDQVLPENEENYVIYHYFDIFIN 118 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + ++++E++LL +GFGLDL+KC V + L+++SPK+G A+ +++GLP Sbjct: 119 SIQSKNINWQIKYLKLEMVLLSELGFGLDLSKCAVNQTQESLIFISPKTGKAISKNIGLP 178 Query: 179 YAEKMLVLPSFLWKEEQTIDAD----SLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 Y +K+L LP L+ + K + + YF K+ L I RE + Sbjct: 179 YKKKLLPLPQLLYNIYNNYTYEFSNTEFKLSLNVLGYFFKKHFLTDKNITFLKYREEIIK 238 Query: 235 KL 236 L Sbjct: 239 LL 240 >gi|284006741|emb|CBA71998.1| DNA repair protein [Arsenophonus nasoniae] Length = 237 Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 81/239 (33%), Gaps = 13/239 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L+ T GR + +S R + LQ + + W Sbjct: 4 WQ-RAFVLHTRPYSETSLLLDFFTENEGRIRLLAKGARSRRSNLKGCLQPFTPLLIRWGG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + A + ++ GL L R L + P L+ L Sbjct: 63 KGE---MKTLRSAEPISLALPFTGTVLYSGLYVNELLARVLAQNIPYQSLFFEYLTCLQI 119 Query: 121 HK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 S + EL LL ++G+G+D C +G + + Sbjct: 120 LAGSESTPEHALRRFELSLLSHLGYGVDFLHCSGSGEPVINGMTYRYREEKGFIASLVID 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 + + D D+LK+A + T + AL+ + RE F +L Sbjct: 180 HLSFTGKQLKAFACREFPDVDTLKAAKRFT-----RIALKPYLGGTPLKSRELFYQLIL 233 >gi|57239220|ref|YP_180356.1| DNA repair protein RecO [Ehrlichia ruminantium str. Welgevonden] gi|58579178|ref|YP_197390.1| DNA repair protein RecO [Ehrlichia ruminantium str. Welgevonden] gi|57161299|emb|CAH58220.1| putative DNA repair protein RecO [Ehrlichia ruminantium str. Welgevonden] gi|58417804|emb|CAI27008.1| Putative DNA repair protein recO [Ehrlichia ruminantium str. Welgevonden] Length = 244 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 8/242 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD I++ +R Y + +I+ V+T+++G G + + + LQ G+ + V W + Sbjct: 1 MRWQDQGIVIAIRKYCDNQVIISVLTKKHGLKKGLTKYYKKTINR--LQIGDYINVTWSA 58 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL-- 118 RL NLG F++E+++S ++++L L + + + Sbjct: 59 RLISNLGYFKYELIKSTIYYYITNNLQTLCLAFFTFILDQVLPENEENYVIYHYFDIFIN 118 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + ++++E++LL +GFGLDL+KC V + L+++SPK+G A+ ++GLP Sbjct: 119 SIQSKNINWQIKYLKLEMVLLSELGFGLDLSKCAVNQTQESLIFISPKTGKAISENIGLP 178 Query: 179 Y----AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 Y +L + K + + YF K+ L I RE + Sbjct: 179 YKKKLLPLPQLLYNIYNDYTYEFSNTEFKLSLNVLGYFFKKHFLTDKNITFLKYREEIIK 238 Query: 235 KL 236 L Sbjct: 239 LL 240 >gi|310764813|gb|ADP09763.1| DNA repair protein RecO [Erwinia sp. Ejp617] Length = 245 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 45/230 (19%), Positives = 79/230 (34%), Gaps = 13/230 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L++ + Q+GR + +S R + LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPWSETSLLLDLFSEQHGRVRVLAKGARSKRSSLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A LS + GL L R L EL+ Sbjct: 60 WSGRGEVKTLRAAEP---VSLALPLSGNTLYCGLYVNELLSRVLQHETAFSELFFDYLQC 116 Query: 118 LNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + P+ + EL +L ++G+G+D C +G + Sbjct: 117 IQTLAADPASPEPALRRFELSMLGHLGYGVDFLHCAGSGEEVADSMTYSYREEKGFIASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH 226 + + DAD+L++A + T + AL+ + Sbjct: 177 VAGHRSFSGRQLRALSAREFPDADTLRAAKRFT-----RIALKPYLGGKP 221 >gi|259907679|ref|YP_002648035.1| DNA repair protein RecO [Erwinia pyrifoliae Ep1/96] gi|224963301|emb|CAX54786.1| DNA repair protein RecO [Erwinia pyrifoliae Ep1/96] gi|283477530|emb|CAY73446.1| DNA repair protein recO (Recombination protein O) [Erwinia pyrifoliae DSM 12163] Length = 245 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 45/230 (19%), Positives = 79/230 (34%), Gaps = 13/230 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L++ + Q+GR + +S R + LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPWSETSLLLDLFSEQHGRVRVLAKGARSKRSSLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A LS + GL L R L EL+ Sbjct: 60 WSGRGEVKTLRAAEP---VSLALPLSGNTLYCGLYVNELLSRVLQHETAFSELFFDYLQC 116 Query: 118 LNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + P+ + EL +L ++G+G+D C +G + Sbjct: 117 IQTLAADPASPEPALRRFELSMLGHLGYGVDFLHCAGSGEEVADSMTYSYREEKGFIASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH 226 + + DAD+L++A + T + AL+ + Sbjct: 177 VAGHRSFSGRQLRALSAREFPDADTLRAAKRFT-----RIALKPYLGGKP 221 >gi|300691970|ref|YP_003752965.1| DNA repair protein recO (Recombination protein O) [Ralstonia solanacearum PSI07] gi|299079030|emb|CBJ51692.1| DNA repair protein recO (Recombination protein O) [Ralstonia solanacearum PSI07] Length = 272 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 72/235 (30%), Gaps = 9/235 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSR 61 Q A +L Y E ++I++V TR +GR + + + +LQ + ++W R Sbjct: 41 QQPAFVLHSYPYRETSLIIDVFTRDHGRIALVAKGAKRPHSALRAVLQTFQPLSLSWSGR 100 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 L L G L +F+ + L+ LN Sbjct: 101 GEVKT---LTRAEWVGGMLPLGGEGLLSGFYLNELLVKFVAREDGHPVLFSHYVETLNKL 157 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR-SVGLPYA 180 + E +LL+ GF L +C+ Q + R P + Sbjct: 158 AHGEPVAFTLRAFERVLLRETGFAAQLDRCIDGEPVQPDGDYVYHPERGIRRAQPSDPSS 217 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 +L + L E + + + FL Y L R+ + Sbjct: 218 WPVLRGQTLLDMERDDYSRPATATQSRSLMRFLLHYHL---HGTPLSTRQILIDL 269 >gi|332308047|ref|YP_004435898.1| DNA repair protein RecO [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175376|gb|AEE24630.1| DNA repair protein RecO [Glaciecola agarilytica 4H-3-7+YE-5] Length = 240 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 48/229 (20%), Positives = 78/229 (34%), Gaps = 11/229 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQ 64 +L R+Y E + ++ T + G+ V+ + + + +LQ + V R Sbjct: 8 GFVLHRRAYRETSFLINFFTMENGKVSAIVKGARGAKSDKKSLLQPFQPLLVAVSGRFEL 67 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + LS L L R L + P E++ + L+ Sbjct: 68 KNLQQVEST---GAMLRLSGQALYCALYLNEVLNRVLADDIPHPEIFVLYQQSLHALVDS 124 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 + I EL LL +G+G+DLT TG C G Sbjct: 125 THFEPILRSFELGLLDALGYGIDLTHDADTGQPLAESGYYRIQAELGCVYQGDIRLSGCH 184 Query: 185 VLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHL-LRENF 232 + S L + DA+SL+ A +T + AL + L RE F Sbjct: 185 LGSSLLKVAGEHWDAESLQVAKAVT-----RKALGELLGSKPLMSRELF 228 >gi|253988788|ref|YP_003040144.1| DNA repair protein RecO [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780238|emb|CAQ83399.1| dna repair protein reco (recombination protein o) [Photorhabdus asymbiotica] Length = 241 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 87/241 (36%), Gaps = 15/241 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 WQ A IL R Y E +++L++ T GR + +S R + LQ + + W Sbjct: 4 WQ-RAFILHRRPYSETSLLLDLFTENEGRISVLAKGARSRRSNLKGCLQPFTPLLIRWSG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R + + + L+ S+ GL L R L + L+ L Sbjct: 63 RG---VVKTLRDADPISLTLPLTGSVLYSGLYVNELLSRVLEQGTAYPALFFDYLQCLQV 119 Query: 121 H-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRSVGLP 178 + EL LL N+G+G+D C +G D + + S+ + Sbjct: 120 LAASEYTPEHALRRFELALLANLGYGVDYLHCAGSGEPVTDTMTYRYREEKGFIASLVVD 179 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN-IIHCHLLRENFLGKLL 237 + L + D+ +LK+A + T + AL+ + RE F + Sbjct: 180 HYSFTGHELKSLA-TREFPDSVTLKAAKRFT-----RIALKPYLGGNPLKSRELFRQFVR 233 Query: 238 E 238 + Sbjct: 234 K 234 >gi|323490067|ref|ZP_08095288.1| DNA repair protein RecO [Planococcus donghaensis MPA1U2] gi|323396363|gb|EGA89188.1| DNA repair protein RecO [Planococcus donghaensis MPA1U2] Length = 260 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 65/193 (33%), Gaps = 2/193 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-R 59 M Q + I++ YGE N I+ + T++ G+ R + + ++ Sbjct: 1 MQNQVEGIVIRTMPYGETNKIVTLFTKEAGKITCMARGAKKPASRLAAITQVFTHGSFSI 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + LES Y + R + EP ++DML L+ Sbjct: 61 YKGKGMGTIQAGDPLESLRHIREDIMSTAYASYVTELIDRLTEQDEPQPAIFDMLYQALH 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 I + +E +L+ G L +C G T+ S + G +C Sbjct: 121 AIDDGYDPEAITLFVEWKMLQTAGLTPTLHQCANCGSTEGEFAFSFQELGFLCHRC-FHI 179 Query: 180 AEKMLVLPSFLWK 192 ++ L L K Sbjct: 180 DSYIIRLSPALVK 192 >gi|238796737|ref|ZP_04640243.1| DNA repair protein recO [Yersinia mollaretii ATCC 43969] gi|238719468|gb|EEQ11278.1| DNA repair protein recO [Yersinia mollaretii ATCC 43969] Length = 241 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 80/241 (33%), Gaps = 15/241 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L++ T GR + + R + LQ + V W Sbjct: 4 WQ-RAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVRWSG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R A LS S+ GL L R L + L+ L Sbjct: 63 RGEVKTLRSAEP---VSLALPLSGSMLYSGLYVNELLSRVLEHQTNYSALFFDYLHCLQS 119 Query: 121 HKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 Q EL +L ++G+G+D C +G L Sbjct: 120 LAGSDGTPEYALRQFELAILAHLGYGVDFLHCSGSGQPVSETMTYRYRE-EKGFIASLVI 178 Query: 180 AEKMLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 L + DAD+L++A + T + AL+ + RE F ++ Sbjct: 179 DHYSFTGRQLLALAHREFPDADTLRAAKRFT-----RIALKPYLGGKPLKSRELFRQFVI 233 Query: 238 E 238 + Sbjct: 234 K 234 >gi|255003183|ref|ZP_05278147.1| DNA repair protein RecO [Anaplasma marginale str. Puerto Rico] gi|255004314|ref|ZP_05279115.1| DNA repair protein RecO [Anaplasma marginale str. Virginia] Length = 233 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 73/236 (30%), Positives = 119/236 (50%), Gaps = 11/236 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 +++G R YG+++++L ++TR G G R + LQ G+L+ WR++L NL Sbjct: 2 GVVMGTRPYGDEHLLLSILTRNRGLRRGLTRLTKKR----PLQIGDLIDATWRAKLPTNL 57 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNCHKIPS 125 G F EV+ S + L L SI + LPE EP LYD F + + Sbjct: 58 GHFTCEVIASAFYSYFRDRIKLMCLSSITHIMSTALPENEPHPTLYDSFQDFAAAAEAEA 117 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 ++++EL++L +GF LDL+KC V+ +LL++SPK+G A+ +VG Y K+L Sbjct: 118 PWYNHYLKLELLVLSQLGFALDLSKCAVSNSKDNLLFISPKTGRALSEAVGHAYRNKLLP 177 Query: 186 LPSFLWK-----EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 LP L E + AD + ++ +FL+++ LQ + R+ G L Sbjct: 178 LPKVLRSISCGVETECCSADEFALSLKILGFFLHRHLLQESH-TFQESRKILTGLL 232 >gi|329297707|ref|ZP_08255043.1| DNA repair protein RecO [Plautia stali symbiont] Length = 245 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 52/237 (21%), Positives = 88/237 (37%), Gaps = 15/237 (6%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ + GR + +S R + LQ + V Sbjct: 1 MEGWQ-RAFVLHSRPYSETSLLLDLFSESQGRVRVLAKGARSRRSQRKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A LS GL L R L + P EL+ Sbjct: 60 WGGRGEVKTLRNAEA---VSLALPLSGITLYCGLYVNELLSRVLEQEIPFSELFFDYLSC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRSV 175 + + + + EL LL ++G+G++ C +G D + S + S+ Sbjct: 117 IQTLAVANGSPEPALRRFELALLGHLGYGVNFLHCAGSGEAVDDGMTYSYREEKGFIASL 176 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENF 232 + LW E + DAD+L++A + T + AL+ + L + Sbjct: 177 VVNQRSFTGRQLRALW-EREFPDADTLRAAKRFT-----RMALKPYLGGKPLNSQEL 227 >gi|37527214|ref|NP_930558.1| DNA repair protein RecO [Photorhabdus luminescens subsp. laumondii TTO1] gi|42559442|sp|Q7N1X7|RECO_PHOLL RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|36786648|emb|CAE15712.1| DNA repair protein recO (recombination protein O) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 241 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 47/230 (20%), Positives = 81/230 (35%), Gaps = 14/230 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E +++L++ T GR + + R + LQ + V W R Sbjct: 8 FVLHGRPYSETSLLLDLFTENEGRISVLAKGARGRRSNLKGCLQPFTPLLVRWSGRG--- 64 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH-KIP 124 + + A L+ S+ GL L R L + L+ L Sbjct: 65 AIKTLRDADPISLALPLTGSVLYSGLYINELLSRVLEQGTAYPALFFDYLQCLQILAASE 124 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + EL LL N+G+G+D C +G D + + S+ + + Sbjct: 125 YTPEYALRRFELALLANLGYGVDYLHCAGSGEPVADTMTYRYREEKGFIASLVVDHYSFT 184 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 L + D+ +LK+A + T + AL+ + RE F Sbjct: 185 GRELKSLA-TREFPDSATLKAAKRFT-----RIALKPYLGGKPLKSRELF 228 >gi|72394258|gb|AAZ68535.1| recO-related protein [Ehrlichia canis str. Jake] Length = 248 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 70/241 (29%), Positives = 122/241 (50%), Gaps = 8/241 (3%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 WQD I++ +R YG+ II+ + T+++G G R + + LQ G+ V V W ++ Sbjct: 6 RWQDQGIVIAIRKYGDDQIIISIFTQKHGLKKGLARYQKKTIHR--LQIGDHVNVTWSAK 63 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGL-QSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L NLG F++E+++S + ++L + L + LPE E +Y+ L+IF+N Sbjct: 64 LISNLGYFKYEIIKSTLHHYIHNNLKTMCIAFFTSILDQVLPENEENYTIYNHLDIFMNS 123 Query: 121 H-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 ++ +EL LL +GFGLDL++C V ++L+++SPK+G A+ ++VGLPY Sbjct: 124 VQNKDVNWQIKYLTLELTLLSELGFGLDLSQCAVNNTNENLIFISPKTGKAISQTVGLPY 183 Query: 180 AE----KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 + +L + K + +T YFL K+ L I R+ + Sbjct: 184 KKSLLPLPPLLYNVYNNYTYKYSKTDFKVSLNVTGYFLKKHFLTEKNITLIKYRDEIIKL 243 Query: 236 L 236 + Sbjct: 244 I 244 >gi|226328139|ref|ZP_03803657.1| hypothetical protein PROPEN_02030 [Proteus penneri ATCC 35198] gi|225203843|gb|EEG86197.1| hypothetical protein PROPEN_02030 [Proteus penneri ATCC 35198] Length = 245 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 73/234 (31%), Gaps = 13/234 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 WQ A ++ R Y E +++L+ T GR + + R + LQ + + W Sbjct: 4 WQ-RAFVIHARPYSETSLLLDFFTENEGRVRILSKGARGRRSPLKGALQPFTPLLIRWSG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R A L+ S+ GL L R L L+ L Sbjct: 63 RGEIKTLRDAEP---ISLALPLTGSVLYSGLYLNELLSRVLENGTSYSVLFFEYLSCLQI 119 Query: 121 H-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + EL LL +G+GLD C +G + + Sbjct: 120 LAASETTPEAALRRFELALLTQLGYGLDFLHCAGSGEPVSDSMTYRYREEKGFIASLVVD 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + ++LK+A + T + AL+ + RE F Sbjct: 180 HNSFTGFELKSLASREFPTVETLKAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|332162689|ref|YP_004299266.1| DNA repair protein RecO [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606794|emb|CBY28292.1| DNA recombination and repair protein RecO [Yersinia enterocolitica subsp. palearctica Y11] gi|325666919|gb|ADZ43563.1| DNA repair protein RecO [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 241 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 80/243 (32%), Gaps = 14/243 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ T GR + + R + LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 R A L+ S+ GL L R L + L+ Sbjct: 60 CTGRGEVKTLRSAEP---VSLALPLAGSMLYSGLYVNELLSRVLEHQTNYSALFFDYLHC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L Q EL +L ++G+G+D C +G + Sbjct: 117 LQSLAGSDGSPEYALRQFELAILAHLGYGVDFLHCAGSGQPVSDTMTYRYREEKGFIASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 + + DAD+L++A + T + AL+ + RE F Sbjct: 177 VVDHYSFTGRQLLALANREFPDADTLRAAKRFT-----RIALKPYLGGKPLKSRELFRQF 231 Query: 236 LLE 238 +++ Sbjct: 232 VIK 234 >gi|290476132|ref|YP_003469032.1| gap repair protein [Xenorhabdus bovienii SS-2004] gi|289175465|emb|CBJ82268.1| gap repair protein, part of RecFOR complex that targets RecA to ssDNA-dsDNA junction [Xenorhabdus bovienii SS-2004] Length = 245 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 84/241 (34%), Gaps = 15/241 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L+ T GR + + R + LQ + V W Sbjct: 4 WQ-RAFVLHGRPYSETSLLLDFFTENEGRVRVLAKGVRRRRSHLKGCLQPFTPLLVRWSG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R + A L+ S+ GL L R L + L+ L Sbjct: 63 RGEIKILRDAEP---ISLALPLTGSVLYSGLYVNELLSRVLEQGAAYPALFFDYLQCLQI 119 Query: 121 H-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRSVGLP 178 + EL LL N+G+G+D C +G D + + S+ + Sbjct: 120 LAASEYTPEYALRRFELALLTNMGYGVDYLHCAGSGEPVSDTMNYRYREEKGFIASLVVD 179 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 + L + D+ +LK+A + T + AL+ + RE F + Sbjct: 180 HFSFTGNELKALA-TGEFTDSLTLKAAKRFT-----RIALKPYLGGKPLKSRELFRQFVR 233 Query: 238 E 238 + Sbjct: 234 K 234 >gi|149926462|ref|ZP_01914723.1| DNA repair protein RecO [Limnobacter sp. MED105] gi|149824825|gb|EDM84039.1| DNA repair protein RecO [Limnobacter sp. MED105] Length = 244 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 36/243 (14%), Positives = 78/243 (32%), Gaps = 16/243 (6%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSR 61 D A +L Y E ++I+E+ +++GR + + ++ +L + + V + + Sbjct: 8 TDFAYVLHSVPYKETSLIVELFCKEHGRLPVVAKGAKRPHSGLRAVLVSFQPLSVRFTGK 67 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + L R L + +L+++ L Sbjct: 68 SEVKTLMQAEWLGGLMSP---DGKALFAAYYLNELLMRGLSREDTHPDLFELYQNTLLGL 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 + Q E+ LL+++G+GLD + + S G Sbjct: 125 AGGDDMNVCVRQFEVGLLQSLGYGLDWQQDRTGVAIDPERHYVWQDHEGWSPSDGGNVNN 184 Query: 182 ------KMLVLPSFLWKEEQTIDADSLKSAFQ-LTDYFLNKYALQHNIIHCHLLRENFLG 234 + +V ++ + + I + S SA + +T L + N + R Sbjct: 185 STSSSVEQMVQGLWIAEIQNGIWSKSAASALKPITRKLLMTHI-APNGLM---SRVWMEH 240 Query: 235 KLL 237 L Sbjct: 241 LLR 243 >gi|254995034|ref|ZP_05277224.1| DNA repair protein RecO [Anaplasma marginale str. Mississippi] Length = 233 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 73/236 (30%), Positives = 120/236 (50%), Gaps = 11/236 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 +++G R YG+++++L ++TR G G R + LQ G+L+ WR++L NL Sbjct: 2 GVVMGTRPYGDEHLLLSILTRNRGLRRGLTRLTKKR----PLQIGDLIDATWRAKLPTNL 57 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNCHKIPS 125 G F +EV+ S + L L SI + LPE EP LYD F + + Sbjct: 58 GHFTYEVIASAFYSYFRDRIKLMCLSSITHIMSTALPENEPHPTLYDSFQDFAAAAEAEA 117 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 ++++EL++L +GF LDL+KC V+ +LL++SPK+G A+ +VG Y K+L Sbjct: 118 PWYNHYLKLELLVLSQLGFALDLSKCAVSNSKDNLLFISPKTGRALSEAVGHAYRNKLLP 177 Query: 186 LPSFLWK-----EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKL 236 LP L E + AD + ++ +FL+++ LQ + R+ G L Sbjct: 178 LPKVLRSISCGVETECCSADEFALSLKILGFFLHRHLLQESH-TFQESRKILTGLL 232 >gi|300704605|ref|YP_003746208.1| DNA repair protein reco (recombination protein o) [Ralstonia solanacearum CFBP2957] gi|299072269|emb|CBJ43602.1| DNA repair protein recO (Recombination protein O) [Ralstonia solanacearum CFBP2957] Length = 272 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 5/170 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSR 61 Q A +L Y E ++I++V TR +GR + + + +LQ + ++W R Sbjct: 41 QQPAFVLHSYPYRETSLIIDVFTRDHGRVALVAKGAKRPHSALRAVLQTFQPLSLSWSGR 100 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 L L G L +F+ + L+ LN Sbjct: 101 GEVKT---LTRAEWVGGMLPLGGEGLLSGFYLNELLVKFVAREDGHPVLFSHYVDTLNKL 157 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV 171 + E +LL+ GF L +C+ Q + Sbjct: 158 AHGEPVAFTLRAFERVLLRETGFAARLDRCIDGEPVQPDGDYVYHPERGI 207 >gi|196248953|ref|ZP_03147653.1| DNA repair protein RecO [Geobacillus sp. G11MC16] gi|196211829|gb|EDY06588.1| DNA repair protein RecO [Geobacillus sp. G11MC16] Length = 258 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 72/188 (38%), Gaps = 1/188 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + +AI++ YGE N I+ + TR++G+ R + + L ++ Sbjct: 1 MFQKCEAIVIRAIDYGETNKIVTLFTREWGKVAAMARGAKKPSSRLSAVTQPLAYGHYLI 60 Query: 61 RLAQNLG-EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R ++ +G + E+++S Y + + E++ L+++L L Sbjct: 61 RRSRGVGLLHQGELIDSMRVLREDLFAAAYAAYIVELTDKSTEEQKRNPYLFELLLQTLQ 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + E+ +L +G L +C G T+ S K G +C Sbjct: 121 YMSEGRDLEIMTFIYEMKMLSVLGIPPVLDRCARCGATEGRFSFSVKEAGFLCHRCEAAD 180 Query: 180 AEKMLVLP 187 + + P Sbjct: 181 PHRFPLSP 188 >gi|138896060|ref|YP_001126513.1| DNA repair protein RecO [Geobacillus thermodenitrificans NG80-2] gi|166221892|sp|A4IR14|RECO_GEOTN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|134267573|gb|ABO67768.1| DNA repair protein RecO [Geobacillus thermodenitrificans NG80-2] Length = 258 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 72/188 (38%), Gaps = 1/188 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + +AI++ YGE N I+ + TR++G+ R + + L ++ Sbjct: 1 MFQKCEAIVIRAIDYGETNKIVTLFTREWGKVAAMARGAKKPSSRLSAVTQPLAYGHYLI 60 Query: 61 RLAQNLG-EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R ++ +G + E+++S Y + + E++ L+++L L Sbjct: 61 RRSRGVGLLHQGELIDSMRVLREDLFAAAYAAYIVELTDKSTEEQKRNPYLFELLLQTLQ 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + E+ +L +G L +C G T+ S K G +C Sbjct: 121 YMSEGRDLEIMTFIYEMKMLSVLGIPPVLDRCARCGATEGRFSFSVKEAGFLCHRCESAD 180 Query: 180 AEKMLVLP 187 + + P Sbjct: 181 PHRFPLSP 188 >gi|239827757|ref|YP_002950381.1| DNA repair protein RecO [Geobacillus sp. WCH70] gi|259563679|sp|C5D4S3|RECO_GEOSW RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|239808050|gb|ACS25115.1| DNA repair protein RecO [Geobacillus sp. WCH70] Length = 263 Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 62/178 (34%), Gaps = 1/178 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-R 59 M+ + +AI++ YGE N I+ TR++G+ R + + + Sbjct: 1 MFEKCEAIVIRAIDYGETNKIVTFFTREWGKVATMARGAKKPSSRLSAVTQPFTHGYYLI 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + ++++S Y + + E++ L+++L L Sbjct: 61 QRSRGVGVLHQGDIIDSMRTIREDIFTAAYASYIVEMTDKVTEEQQRNPYLFELLLQTLQ 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + E+ +L +G L C V G T+ S K G +C Sbjct: 121 YMNEGLDLEILACIYEMKMLSVMGIPPKLDHCAVCGRTEGKFSFSIKEAGFLCHRCEK 178 >gi|291618444|ref|YP_003521186.1| RecO [Pantoea ananatis LMG 20103] gi|291153474|gb|ADD78058.1| RecO [Pantoea ananatis LMG 20103] gi|327394840|dbj|BAK12262.1| DNA repair protein RecO [Pantoea ananatis AJ13355] Length = 245 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 79/237 (33%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L++ + GR + +S R + LQ + V Sbjct: 1 MEGWQ-RAFVLHSRPFSETSLLLDLFSESEGRVRVLAKGARSRRSQLKGTLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A LS GL L R L + P EL+ Sbjct: 60 WSGRGEVKTLRNAEA---VSLALPLSGITLYCGLYVNELLSRVLEQHIPFSELFFDYLQC 116 Query: 118 LNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + EL LL ++G+G+D C +G + Sbjct: 117 IQMLAAGEGSPEPALRRFELALLGHLGYGVDFLHCAGSGEPVSEAMTYSYREEKGFIASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + DA++L++A + T + AL+ + +E F Sbjct: 177 VLNQRSFTGRELQALFTREFPDAETLRAAKRFT-----RMALKPYLGGKPLKSQELF 228 >gi|207725213|ref|YP_002255609.1| DNA repair protein RecO [Ralstonia solanacearum MolK2] gi|206590447|emb|CAQ37409.1| dna repair protein reco (recombination protein o) [Ralstonia solanacearum MolK2] Length = 272 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 5/170 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSR 61 Q A +L Y E ++I++V TR +GR + + + +LQ + ++W R Sbjct: 41 QQPAFVLHSYPYRETSLIIDVFTRDHGRIALVAKGAKRPHSALRAVLQTFQPLSLSWSGR 100 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 L L G L +F+ + L+ LN Sbjct: 101 GEVKT---LTRAEWVGGMLPLGGEGLLSGFYLNELLVKFVAREDGHAVLFSHYVDTLNKL 157 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV 171 + E +LL+ GF L +C+ Q + Sbjct: 158 AHGEPVAFTLRAFERVLLRETGFAAQLDRCIDGEPVQPDGDYVYHPERGI 207 >gi|83748441|ref|ZP_00945463.1| RecO [Ralstonia solanacearum UW551] gi|207743588|ref|YP_002259980.1| dna repair protein reco (recombination protein o) [Ralstonia solanacearum IPO1609] gi|83724852|gb|EAP72008.1| RecO [Ralstonia solanacearum UW551] gi|206594987|emb|CAQ61914.1| dna repair protein reco (recombination protein o) [Ralstonia solanacearum IPO1609] Length = 272 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 5/170 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSR 61 Q A +L Y E ++I++V TR +GR + + + +LQ + ++W R Sbjct: 41 QQPAFVLHSYPYRETSLIIDVFTRDHGRIALVAKGAKRPHSALRAVLQTFQPLSLSWSGR 100 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 L L G L +F+ + L+ LN Sbjct: 101 GEVKT---LTRAEWVGGMLPLGGEGLLSGFYLNELLVKFVAREDGHAVLFSHYVDTLNKL 157 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV 171 + E +LL+ GF L +C+ Q + Sbjct: 158 AHGEPVAFTLRAFERVLLRETGFAAQLDRCIDGEPVQPDGDYVYHPERGI 207 >gi|52081074|ref|YP_079865.1| DNA repair protein RecO [Bacillus licheniformis ATCC 14580] gi|52786454|ref|YP_092283.1| DNA repair protein RecO [Bacillus licheniformis ATCC 14580] gi|319644967|ref|ZP_07999200.1| DNA repair protein recO [Bacillus sp. BT1B_CT2] gi|81609046|sp|Q65H74|RECO_BACLD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|52004285|gb|AAU24227.1| RecO [Bacillus licheniformis ATCC 14580] gi|52348956|gb|AAU41590.1| RecO [Bacillus licheniformis ATCC 14580] gi|317392776|gb|EFV73570.1| DNA repair protein recO [Bacillus sp. BT1B_CT2] Length = 256 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 70/179 (39%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + + I+L YGE N I+ ++TR++G+ R + + + + ++ Sbjct: 1 MLTKCEGIVLRTNDYGETNKIITLLTREHGKIGVLARGAKKPNSRLSAISQPFLYASFLF 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + LG + E++ES L Y + + E++P L+++L + Sbjct: 61 RKSSGLGTLEQGEMIESMRNIREDLFLTAYAAYIAELIDKGTEEKKPNPFLFELLLQSMR 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + I IE+ +L +G +L +CV S + G +C Sbjct: 121 RLNDGTDPDIIANLIEVKMLSVMGLYPELDECVHCKSKDGTFHFSIRDNGFICHRCFAK 179 >gi|227356255|ref|ZP_03840644.1| recombination protein O [Proteus mirabilis ATCC 29906] gi|227163719|gb|EEI48635.1| recombination protein O [Proteus mirabilis ATCC 29906] Length = 246 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 76/237 (32%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A ++ R Y E +++L+ T GR + + R + LQ + + Sbjct: 1 MEGWQ-RAFVIHARPYSETSLLLDFFTENEGRVRILSKGARGRRSPLKGALQPFTPLLIR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A L+ ++ GL L R L L+ Sbjct: 60 WSGRGEIKTLRDAEP---ISLALPLTGTVLYSGLYLNELLSRVLENGTSYSALFFEYLSC 116 Query: 118 LNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + + EL LL +G+GLD C +G + Sbjct: 117 LQILAASETTPEAALRRFELALLTQLGYGLDFLHCAGSGEPVSDTMTYRYREEKGFIASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + L + + A +LK+A + T + AL+ + RE F Sbjct: 177 VVDHYSFTGLELKSLAKREFPTAGTLKAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|292489088|ref|YP_003531975.1| DNA repair protein RecO [Erwinia amylovora CFBP1430] gi|292900212|ref|YP_003539581.1| DNA repair protein [Erwinia amylovora ATCC 49946] gi|291200060|emb|CBJ47186.1| DNA repair protein [Erwinia amylovora ATCC 49946] gi|291554522|emb|CBA22090.1| DNA repair protein recO (Recombination protein O) [Erwinia amylovora CFBP1430] Length = 245 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 77/234 (32%), Gaps = 13/234 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 WQ A +L R + E +++L++ + Q GR + +S R + LQ + V W Sbjct: 4 WQ-RAFVLHGRPWSETSLLLDLFSEQCGRVRVLAKGARSKRSSLKGALQPFTPLLVRWSG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R A LS + GL L R L EL+ + Sbjct: 63 RGEVKTLRAAEP---VSLALPLSGTTLYCGLYVNELLSRVLQHETAFNELFFDYLQCIQT 119 Query: 121 H-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + EL +L ++G+G+D C +G + + Sbjct: 120 LAADSGSPEPALRRFELSMLGHLGYGVDFLHCAGSGEEVADSMTYSYREEKGFIASLVAG 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + DAD+L++A + T + AL+ + E F Sbjct: 180 HRSFSGRQLRALSAREFPDADTLRAAKRFT-----RIALKPYLGGKPLKSSELF 228 >gi|312110186|ref|YP_003988502.1| DNA repair protein RecO [Geobacillus sp. Y4.1MC1] gi|311215287|gb|ADP73891.1| DNA repair protein RecO [Geobacillus sp. Y4.1MC1] Length = 264 Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 63/184 (34%), Gaps = 1/184 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-R 59 M+ + +AI++ YGE N I+ TR++G+ R + + + Sbjct: 1 MFEKCEAIVIRATDYGETNKIVTFFTREWGKVAAMARGAKKPSSRLSAVTQLFTYGYYLI 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + ++++S A Y + + E + L+++L L Sbjct: 61 QRSRGVGVLQQGDIIDSMRATREDIFTAAYASYIVELTDKITEEHQRNPYLFELLLQTLQ 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + E +L +G L C + G T+ S K G +C Sbjct: 121 YMNEGRDLEILASIYETKMLSVMGIPPKLDYCAICGRTEGKFSFSIKEAGFLCHRCEQYD 180 Query: 180 AEKM 183 ++ Sbjct: 181 PHRI 184 >gi|188533140|ref|YP_001906937.1| DNA repair protein RecO [Erwinia tasmaniensis Et1/99] gi|238691986|sp|B2VI48|RECO_ERWT9 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|188028182|emb|CAO96040.1| DNA repair protein RecO [Erwinia tasmaniensis Et1/99] Length = 245 Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 80/237 (33%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L++ + Q+GR + ++ R + LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPWSETSLLLDLFSEQHGRVRVLAKGARAKRSSLKGALQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A LS + GL L R L EL+ Sbjct: 60 WSGRGEVKTLRSAEP---VSLALPLSGTTLYCGLYVNELLSRVLQHETAFSELFFDYLNC 116 Query: 118 LNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + P + EL +L ++G+G+D C +G + Sbjct: 117 IQTLAADPPSPEPALRRFELSMLGHLGYGVDFLHCAGSGEEIADGMTYSYREEKGFIASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + DAD+L++A + T + AL+ + E F Sbjct: 177 VTGHRSFTGRQLRALSTREFPDADTLRAAKRFT-----RIALKPWLGGKPLKSSELF 228 >gi|197285741|ref|YP_002151613.1| DNA repair protein [Proteus mirabilis HI4320] gi|238693200|sp|B4F045|RECO_PROMH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|194683228|emb|CAR43909.1| DNA repair protein [Proteus mirabilis HI4320] Length = 246 Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 76/237 (32%), Gaps = 14/237 (5%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A ++ R Y E +++L+ T GR + + R + LQ + + Sbjct: 1 MEGWQ-RAFVIHARPYSETSLLLDFFTENEGRVRILSKGARGRRSPLKGALQPFTPLLIR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W R A L+ ++ GL L R L L+ Sbjct: 60 WSGRGEIKTLRDAEP---ISLALPLTGTVLYSGLYLNELLSRVLENGTSYSTLFFEYLSC 116 Query: 118 LNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + + EL LL +G+GLD C +G + Sbjct: 117 LQILAASETTPEAALRRFELALLTQLGYGLDFLHCAGSGEPVSDTMTYRYREEKGFIASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + L + + A +LK+A + T + AL+ + RE F Sbjct: 177 VVDHYSFTGLELKSLAKREFPTAGTLKAAKRFT-----RMALKPYLGGKPLKSRELF 228 >gi|295399212|ref|ZP_06809194.1| DNA repair protein RecO [Geobacillus thermoglucosidasius C56-YS93] gi|294978678|gb|EFG54274.1| DNA repair protein RecO [Geobacillus thermoglucosidasius C56-YS93] Length = 264 Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 64/184 (34%), Gaps = 1/184 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-R 59 M+ + +AI++ YGE N I+ TR++G+ R + + + Sbjct: 1 MFEKCEAIVIRATDYGETNKIVTFFTREWGKVAAMARGAKKPSSRLSAVTQLFTYGYYLI 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + ++++S A Y + + E++ L+++L L Sbjct: 61 QRSRGVGVLQQGDIIDSMRATREDIFTAAYASYIVELTDKITEEQQRNPYLFELLLQTLQ 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + E +L +G L C + G T+ S K G +C Sbjct: 121 YMNEGRDLEILASIYETKMLSVMGIPPKLDYCAICGRTEGKFSFSIKEAGFLCHRCEQYD 180 Query: 180 AEKM 183 ++ Sbjct: 181 PHRI 184 >gi|296333315|ref|ZP_06875768.1| DNA repair protein RecO [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675180|ref|YP_003866852.1| DNA double strand break repair and homologous recombination factor [Bacillus subtilis subsp. spizizenii str. W23] gi|296149513|gb|EFG90409.1| DNA repair protein RecO [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413424|gb|ADM38543.1| DNA double strand break repair and homologous recombination factor [Bacillus subtilis subsp. spizizenii str. W23] Length = 255 Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 63/179 (35%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-R 59 M + + I+L YGE N I+ ++TR++G+ R + + + + ++ Sbjct: 1 MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGAKKPNSRLSAVSQPFLYGSFLM 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + + E++ S L Y + + E++P L++ + Sbjct: 61 QKTSGLGTLQQGEMILSMRGIREDLFLTAYAAYIAELVDKGTEEKKPNPYLFEFILESFK 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + I ++ +L +G +L CV S + G +C Sbjct: 121 QLDEGTDPDVITFIAQMKMLGVMGLYPELNHCVHCKSQDGTFHFSVRDNGFICHRCFEK 179 >gi|300724128|ref|YP_003713445.1| gap repair protein [Xenorhabdus nematophila ATCC 19061] gi|297630662|emb|CBJ91327.1| gap repair protein, part of RecFOR complex that targets RecA to ssDNA-dsDNA junction [Xenorhabdus nematophila ATCC 19061] Length = 245 Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 46/240 (19%), Positives = 77/240 (32%), Gaps = 13/240 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 WQ A +L R Y E +++L+ T GR + +S R + LQ + + W Sbjct: 4 WQ-RAFVLHGRPYSETSLLLDFFTENEGRVRVLAKGVRSRRSHLKGCLQPFTPLLIRWSG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R A L+ S+ GL L R L + L+ L Sbjct: 63 RGEIKTLRDAEP---ISLALPLAGSVLYSGLYVNELLSRVLEQGTAYPALFFDYLQCLQA 119 Query: 121 H-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + EL LL +IG+G+D C +G + + + Sbjct: 120 LAASDRTPEYALRRFELALLTSIGYGVDYLHCAGSGESVTDTMTYRYREEKGFIASLIID 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLLE 238 + D +LK+A + + AL+ + RE F + + Sbjct: 180 NYSFTGYELKALSLGEFPDGVTLKAAKRFI-----RIALKPYLGGKPLKSRELFRQFVRK 234 >gi|221310451|ref|ZP_03592298.1| DNA repair protein RecO [Bacillus subtilis subsp. subtilis str. 168] gi|221314774|ref|ZP_03596579.1| DNA repair protein RecO [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319697|ref|ZP_03600991.1| DNA repair protein RecO [Bacillus subtilis subsp. subtilis str. JH642] gi|221323974|ref|ZP_03605268.1| DNA repair protein RecO [Bacillus subtilis subsp. subtilis str. SMY] gi|255767577|ref|NP_390406.2| DNA repair protein RecO [Bacillus subtilis subsp. subtilis str. 168] gi|321312010|ref|YP_004204297.1| DNA repair protein RecO [Bacillus subtilis BSn5] gi|239938859|sp|P42095|RECO_BACSU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|225185205|emb|CAB14457.2| DNA double strand break repair and homologous recombination factor [Bacillus subtilis subsp. subtilis str. 168] gi|320018284|gb|ADV93270.1| DNA repair protein RecO [Bacillus subtilis BSn5] Length = 255 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 65/179 (36%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-R 59 M + + I+L YGE N I+ ++TR++G+ R + + + + ++ Sbjct: 1 MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGAKKPNSRLSAVSQPFLYGSFLM 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + + E++ S L Y + R E++P L++ + L Sbjct: 61 QKTSGLGTLQQGEMILSMRGIREDLFLTAYAAYVAELVDRGTEEKKPNPYLFEFILESLK 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + I +++ +L +G +L CV S + G +C Sbjct: 121 QLNEGTDPDVITFIVQMKMLGVMGLYPELNHCVHCKSQDGTFHFSVRDNGFICHRCFEK 179 >gi|291484973|dbj|BAI86048.1| DNA repair protein RecO [Bacillus subtilis subsp. natto BEST195] Length = 255 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 65/179 (36%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-R 59 M + + I+L YGE N I+ ++TR++G+ R + + + + ++ Sbjct: 1 MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGAKKPNSRLSAVSQPFLYGSFLM 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + + E++ S L Y + R E++P L++ + L Sbjct: 61 QKTSGLGTLQQGEMILSMRGIREDLFLTAYAAYIAELVDRGTEEKKPNPYLFEFILESLK 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + I +++ +L +G +L CV S + G +C Sbjct: 121 QLNEGTDPDVITFIVQMKMLGVMGLYPELNHCVHCKSQDGTFHFSVRDNGFICHRCFEK 179 >gi|312173246|emb|CBX81501.1| DNA repair protein recO (Recombination protein O) [Erwinia amylovora ATCC BAA-2158] Length = 245 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 77/234 (32%), Gaps = 13/234 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 WQ A +L R + E +++L++ + Q GR + +S R + LQ + V W Sbjct: 4 WQ-RAFVLHGRPWSETSLLLDLFSEQCGRVRVLAKGARSKRSSLKGALQPFTPLLVRWSG 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R A LS + GL L R L EL+ + Sbjct: 63 RGEVKTLRAAEP---VSLALPLSGTTLYCGLYVNELLSRVLQHETAFSELFFDYLQCIQT 119 Query: 121 H-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + EL +L ++G+G+D C +G + + Sbjct: 120 LAADSGSPEPALRRFELSMLGHLGYGVDFLHCAGSGEEVADSMTYSYREEKGFIASLVAG 179 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + DAD+L++A + T + AL+ + E F Sbjct: 180 HRSFSGRQLRALSAREFPDADTLRAAKRFT-----RIALKPYLGGKPLKSSELF 228 >gi|254239134|ref|ZP_04932457.1| DNA repair protein RecO [Pseudomonas aeruginosa C3719] gi|126171065|gb|EAZ56576.1| DNA repair protein RecO [Pseudomonas aeruginosa C3719] Length = 233 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 74/229 (32%), Gaps = 12/229 (5%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLG 67 +L R Y E + +++ T GR +R + + + + + WR R Sbjct: 10 YVLHSRPYKETSALVDFFTP-LGRLRAVLRGARG-KAGALARPFVPLEAEWRGRGELKT- 66 Query: 68 EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI 127 + + LL+ GL L R LP +P E++ L I Sbjct: 67 --VARLESAGIPNLLNGQALFSGLYLNELLIRLLPAEDPQPEIFAHYAATLPLLAAGRPI 124 Query: 128 GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLP 187 + E LL+ +G+G L + + + + L + Sbjct: 125 EPLLRAFEWRLLEQLGYGFALDVDIDGRPIEPQVLYQLLPEAGLEPVAQLQ--PGLFQGS 182 Query: 188 SFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHL-LRENFLGK 235 L + A +A + L + AL ++ L RE F+ + Sbjct: 183 ELLSMADADWSAPGALAAAKR----LMRQALAPHLGGRPLVSRELFMNR 227 >gi|116048688|ref|YP_792512.1| DNA repair protein RecO [Pseudomonas aeruginosa UCBPP-PA14] gi|254245027|ref|ZP_04938349.1| DNA repair protein RecO [Pseudomonas aeruginosa 2192] gi|296390878|ref|ZP_06880353.1| DNA repair protein RecO [Pseudomonas aeruginosa PAb1] gi|313105594|ref|ZP_07791860.1| DNA repair protein RecO [Pseudomonas aeruginosa 39016] gi|122257794|sp|Q02HS4|RECO_PSEAB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|115583909|gb|ABJ09924.1| DNA repair protein RecO [Pseudomonas aeruginosa UCBPP-PA14] gi|126198405|gb|EAZ62468.1| DNA repair protein RecO [Pseudomonas aeruginosa 2192] gi|310878362|gb|EFQ36956.1| DNA repair protein RecO [Pseudomonas aeruginosa 39016] Length = 233 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 73/229 (31%), Gaps = 12/229 (5%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLG 67 +L R Y E + +++ T GR +R + + + + + WR R Sbjct: 10 YVLHSRPYKETSALVDFFTP-LGRLRAVLRGARG-KAGALARPFVPLEAEWRGRGELKT- 66 Query: 68 EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI 127 + + LL+ GL L R LP +P E++ L I Sbjct: 67 --VARLESAGIPNLLNGQALFSGLYLNELLIRLLPAEDPQPEIFAHYAATLPLLAAGRPI 124 Query: 128 GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLP 187 + E LL+ +G+G L + + + L + Sbjct: 125 EPLLRAFEWRLLEQLGYGFALDVDIDGRPIEPQALYQLLPEAGLEPVAQLQ--PGLFQGS 182 Query: 188 SFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHL-LRENFLGK 235 L + A +A + L + AL ++ L RE F+ + Sbjct: 183 ELLSMADADWSAPGALAAAKR----LMRQALAPHLGGRPLVSRELFMNR 227 >gi|306837524|ref|ZP_07470399.1| DNA repair protein RecO [Brucella sp. NF 2653] gi|306407416|gb|EFM63620.1| DNA repair protein RecO [Brucella sp. NF 2653] Length = 182 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 66/176 (37%), Positives = 96/176 (54%), Gaps = 1/176 (0%) Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 +G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + P Sbjct: 1 MGTFTIEPLGFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEHFDDPL 60 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 G++ ++ E+M+L+ +GFGLDL +C TG DL++VSPKSG AVCR G P+A+K+L Sbjct: 61 AAGELLLRFEVMMLEELGFGLDLKECAATGRKDDLIYVSPKSGRAVCREAGAPWADKLLA 120 Query: 186 LPSFLWKEEQTID-ADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 LPSF+ D L AF +T YFL ++ + R FL + I Sbjct: 121 LPSFVNDTALRASCYDDLDRAFTMTGYFLMRHVWEPRAQTPPDSRSGFLNAVGRAI 176 >gi|1303827|dbj|BAA12483.1| YqfI [Bacillus subtilis] Length = 255 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 65/179 (36%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-R 59 M + + I+L YGE N I+ ++TR++G+ R + + + + ++ Sbjct: 1 MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGAKKPNSRLSAVSQPFLYGSFLM 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + + E++ S L Y + R E++P L++ + L Sbjct: 61 QKTSGLGTLQQGEMILSMRGIREDLFLTAYAAYVAELVDRGTEEKKPNPYLFEFILESLK 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + I +++ +L +G +L CV S + G +C Sbjct: 121 QMNEGTDPDVITFIVQMKMLGVMGLYPELNHCVHCKSQDGTFHFSVRDNGFICHRCFEK 179 >gi|295695441|ref|YP_003588679.1| DNA repair protein RecO [Bacillus tusciae DSM 2912] gi|295411043|gb|ADG05535.1| DNA repair protein RecO [Bacillus tusciae DSM 2912] Length = 261 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 57/157 (36%), Gaps = 2/157 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M Q + I+L YGE + I+ ++T + G+ R + R++ ++Q + Sbjct: 1 MNVQVEGIVLRGVDYGETHRIVTLLTPEIGKVGAMARGAKRPQSRLRALVQPLVRGTFSL 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R + + LE + A Y + + RF+ E P +Y+ +L Sbjct: 61 AYRGQGMAIIRQGQWLEGYRAIQEDLWKHAYAGYAAELVDRFVEEATPDPGVYEFFRQWL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + EL + + G L +C G Sbjct: 121 EALAAGKDAEILTRLFELHVCEWAGVRPVLDRCAGCG 157 >gi|145300359|ref|YP_001143200.1| DNA repair protein RecO [Aeromonas salmonicida subsp. salmonicida A449] gi|142853131|gb|ABO91452.1| DNA repair protein RecO [Aeromonas salmonicida subsp. salmonicida A449] Length = 235 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 77/235 (32%), Gaps = 11/235 (4%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRL 62 A ++ R Y E + ++EV T+ GR R + R + +LQ +L+ ++WR + Sbjct: 3 SPAFVIHSRPYRETSQLVEVFTQDSGRFTLVARGSRGPRSPLKGLLQPFSLLTISWRGKG 62 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 S L YGL ++ L P E++D L Sbjct: 63 DLKNLAQVECPDHS---LRLGGDRLFYGLYLNELVYYLLEAHTPFPEVFDAYARALMALA 119 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRSVGLPYAE 181 + E +LL+ +G+ +D Q L + P Sbjct: 120 DGETPELPLRRFEFLLLQALGYAVDFEYAADDESAIQPELLYGFERELGFVACERAPDPR 179 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN-IIHCHLLRENFLGK 235 + + L E D L A + ++ ALQ RE FL + Sbjct: 180 TLFLGAHLLAFAEGRFDTPPLLQAAKR----FSRLALQPYLGRRQLKSRELFLKR 230 >gi|330828484|ref|YP_004391436.1| DNA repair protein RecO [Aeromonas veronii B565] gi|328803620|gb|AEB48819.1| DNA repair protein RecO [Aeromonas veronii B565] Length = 236 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 44/235 (18%), Positives = 75/235 (31%), Gaps = 11/235 (4%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRL 62 A ++ R Y E + ++EV T+ GR R + R + +LQ L+ + WR + Sbjct: 3 TPAFVIHSRPYRETSQLVEVFTQDSGRFTLVARGSRGPRSPLKGLLQPFTLLTIAWRGKG 62 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 S L YGL ++ L P E++D + Sbjct: 63 DLKNLTQVECPDHS---LRLGGDRLFYGLYLNELVYYLLEAHTPFPEVFDAYARAIMALA 119 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRSVGLPYAE 181 + E +LL+ +G+ +D + L + P Sbjct: 120 DGETPELPLRRFEFLLLQALGYAVDFEYTADDESPIEPTLLYGFERELGFVACERAPDPR 179 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN-IIHCHLLRENFLGK 235 + + L E D L A + ++ ALQ RE FL + Sbjct: 180 TLFLGAHLLAFAEGRFDTPPLLQAAKR----FSRLALQPYLGKRQLKSRELFLKR 230 >gi|15595969|ref|NP_249463.1| DNA repair protein RecO [Pseudomonas aeruginosa PAO1] gi|107100233|ref|ZP_01364151.1| hypothetical protein PaerPA_01001256 [Pseudomonas aeruginosa PACS2] gi|218893285|ref|YP_002442154.1| DNA repair protein RecO [Pseudomonas aeruginosa LESB58] gi|12644687|sp|Q9XCX7|RECO_PSEAE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226737868|sp|B7UYX0|RECO_PSEA8 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|9946661|gb|AAG04161.1|AE004512_4 DNA repair protein RecO [Pseudomonas aeruginosa PAO1] gi|218773513|emb|CAW29325.1| DNA repair protein RecO [Pseudomonas aeruginosa LESB58] Length = 233 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 73/229 (31%), Gaps = 12/229 (5%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLG 67 +L R Y E + +++ T GR +R + + + + + WR R Sbjct: 10 YVLHSRPYKETSALVDFFTP-LGRLRAVLRGARG-KAGALARPFVPLEAEWRGRGELKT- 66 Query: 68 EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI 127 + + LL+ GL L R LP +P E++ L I Sbjct: 67 --VARLESAGVPNLLNGQALFSGLYLNELLIRLLPAEDPQPEIFAHYAATLPLLAAGRPI 124 Query: 128 GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLP 187 + E LL+ +G+G L + + + L + Sbjct: 125 EPLLRAFEWRLLEQLGYGFALDVDIDGRPIEPQALYQLLPEAGLEPVAQLQ--PGLFQGS 182 Query: 188 SFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHL-LRENFLGK 235 L + A +A + L + AL ++ L RE F+ + Sbjct: 183 ELLSMADADWSAPGALAAAKR----LMRQALAPHLGGRPLVSRELFMNR 227 >gi|172056863|ref|YP_001813323.1| DNA repair protein RecO [Exiguobacterium sibiricum 255-15] gi|229485534|sp|B1YL74|RECO_EXIS2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|171989384|gb|ACB60306.1| DNA repair protein RecO [Exiguobacterium sibiricum 255-15] Length = 249 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 73/182 (40%), Gaps = 1/182 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + + ++L YGE N I+ ++TR+YG+ R + + + VR + Sbjct: 1 MIDKAEGLVLRTVVYGESNKIITLLTREYGKLAVMARGAKKPGSRFNAASQPFVRAIYVY 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG+ + + + +K+ + Y + + + L ER P LYD+ L Sbjct: 61 PRSRGLGQLKSADVITGYSKIRQDVFLMAYAMYLLELADKALDERVPQPALYDLFVDGLE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +EL LL+++G L C V G + S GG +CR Sbjct: 121 AMDEGLDPDVVSFIVELRLLRHLGIAPHLNGCTVCGSVEAPFAFSLNHGGLLCRRHRQED 180 Query: 180 AE 181 Sbjct: 181 EH 182 >gi|212638695|ref|YP_002315215.1| DNA repair protein RecO [Anoxybacillus flavithermus WK1] gi|212560175|gb|ACJ33230.1| Recombinational DNA repair protein (RecF pathway) [Anoxybacillus flavithermus WK1] Length = 268 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 65/191 (34%), Gaps = 1/191 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVR-VNWR 59 M+ + + I++ YGE N I+ + TR++G+ R + + + Sbjct: 16 MFEKCEGIVIRTIDYGETNKIVTIFTREWGKVAAMARGAKKPSSRLSSVTQIFTYGIFLI 75 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + E+L + L Y I + ER P L+++L L Sbjct: 76 QKSRGVGSLHQGELLSTMRHIREDIFLTAYASYIIELTDKATEERRPNPYLFELLLQTLT 135 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + E+ LL G L C + G + S GG +C Sbjct: 136 YMNEGLDAEVLTYIYEMKLLPAFGLYPKLDGCAICGEKEGTFAFSIAQGGFLCHRCFEHD 195 Query: 180 AEKMLVLPSFL 190 ++ + PS L Sbjct: 196 PHRIPMTPSVL 206 >gi|306845265|ref|ZP_07477841.1| DNA repair protein RecO [Brucella sp. BO1] gi|306274424|gb|EFM56231.1| DNA repair protein RecO [Brucella sp. BO1] Length = 182 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 67/176 (38%), Positives = 96/176 (54%), Gaps = 1/176 (0%) Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 +G F E L A+L+ + + LYG+Q R LPER+P LY+ L + + P Sbjct: 1 MGTFTIEPLSFAAARLIETPVALYGIQLAAAHLRLLPERDPHRGLYETLRLIIEHFDDPL 60 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 G++ ++ E+M+L+ +GFGLDL +C TG DL++VSPKSG AVCR G P+AEK+L Sbjct: 61 AAGELLLRFEVMMLEELGFGLDLKECAATGRKDDLIYVSPKSGRAVCREAGAPWAEKLLS 120 Query: 186 LPSFLWKEEQTID-ADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 LPSF+ D L AF +T YFL ++ + R FL + I Sbjct: 121 LPSFVNDTALRASCYDDLDRAFTMTGYFLMRHVWEPRAQTPPDSRSGFLNAVGRAI 176 >gi|241662607|ref|YP_002980967.1| DNA repair protein RecO [Ralstonia pickettii 12D] gi|309781189|ref|ZP_07675926.1| DNA repair protein RecO [Ralstonia sp. 5_7_47FAA] gi|240864634|gb|ACS62295.1| DNA repair protein RecO [Ralstonia pickettii 12D] gi|308920010|gb|EFP65670.1| DNA repair protein RecO [Ralstonia sp. 5_7_47FAA] Length = 273 Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 51/168 (30%), Gaps = 5/168 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V T YGR + + + +LQ + ++W R Sbjct: 43 PAFVLHSYPYRETSLIIDVFTPDYGRMALVAKGAKRPHSALRAVLQTFQPLSLSWSGRGD 102 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L L G L +F+ + L+ LN Sbjct: 103 VRT---LTRAEWVGGMLPLGGEGLLSGFYLNELLVKFVAREDGHPVLFAHYVETLNKLAH 159 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV 171 E +LL+ GF L +C+ Q + Sbjct: 160 GEPAAFTLRAFERVLLRETGFAAQLDRCIDGEPVQADAEYVYHPERGI 207 >gi|187928025|ref|YP_001898512.1| DNA repair protein RecO [Ralstonia pickettii 12J] gi|187724915|gb|ACD26080.1| DNA repair protein RecO [Ralstonia pickettii 12J] Length = 273 Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 51/168 (30%), Gaps = 5/168 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V T YGR + + + +LQ + ++W R Sbjct: 43 PAFVLHSYPYRETSLIIDVFTPDYGRMALVAKGAKRPHSALRAVLQTFQPLSLSWSGRGD 102 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L L G L +F+ + L+ LN Sbjct: 103 VRT---LTRAEWVGGMLPLGGEGLLSGFYLNELLVKFVAREDGHPVLFAHYVETLNKLAH 159 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV 171 E +LL+ GF L +C+ Q + Sbjct: 160 GEPAAFTLRAFERVLLRETGFAAQLDRCIDGEPVQADAEYVYHPERGI 207 >gi|53804479|ref|YP_113918.1| DNA repair protein RecO [Methylococcus capsulatus str. Bath] gi|67461356|sp|Q608M9|RECO_METCA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|53758240|gb|AAU92531.1| DNA repair protein RecO [Methylococcus capsulatus str. Bath] Length = 242 Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 78/230 (33%), Gaps = 10/230 (4%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRL 62 D A +L R Y E +++LE+ T ++GR + + R +LQ + V+W R Sbjct: 17 DHAYLLHRRDYRETSLLLELFTLRHGRIGVIAKGARRGRQGFAAVLQPFVPLLVSWSGRG 76 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + L + G L R LP +PC EL+ L Sbjct: 77 ELANLNHAEA---AGIGVRLQHTALFCGFYLNELLMRLLPPHDPCPELFGTYRGGLETLA 133 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + EL LL+ IG+GL L +G + A A+ Sbjct: 134 AGEDLETALRSFELSLLEAIGYGLQLRVEAESGEAIRPERLYSYRIDAG-PVPAGDEADA 192 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENF 232 + + ++ + + + A +L + + H RE F Sbjct: 193 VHGMTLLALRDRRFDTSQTRTEAKRL----MRRIIAHHLNGRALKSRELF 238 >gi|239996016|ref|ZP_04716540.1| DNA repair protein RecO [Alteromonas macleodii ATCC 27126] Length = 237 Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 69/234 (29%), Gaps = 15/234 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQ 64 A +L R Y E + I++ T + GR + ++ + + +LQ +R+ + Sbjct: 8 AYVLHRRPYRETSYIVDFFTLEEGRVSAVAKGVKNSKSDKKSLLQPFQHLRLQLSGKSEL 67 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + L + + R +P +++ L + Sbjct: 68 KNLRHVES---VSPSINLVGTALFCAMYVNELTNRVMPAGLASDGVHNAYENALLSLRDE 124 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA----VCRSVGLPYA 180 I Q E LL +G D T V + + A + + P Sbjct: 125 CDIEVTLRQFEFALLDEMGLLPDFTTDVEYEMPIEETGSYNFQIDAGFVPIPEDMAGPRG 184 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFL 233 + + L + S K A L L+ I RE F+ Sbjct: 185 MRGFPGQALLSLSQGEFTPLSKKVAKVLCRD-----LLKPLIGEKPLKSRELFM 233 >gi|117618822|ref|YP_855345.1| DNA repair protein RecO [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560229|gb|ABK37177.1| DNA repair protein RecO [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 235 Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 76/235 (32%), Gaps = 11/235 (4%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRL 62 A ++ R Y E + ++EV T+ GR R + R + +LQ L+ + WR + Sbjct: 3 TPAFVIHSRPYRETSQLVEVFTQDSGRFTLVARGSRGPRSPLKGLLQPFTLLTIAWRGKG 62 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 S L YGL ++ L P E++D + Sbjct: 63 DLKNLTQVECPDHS---LRLGGDRLFYGLYLNELVYYLLEAHTPFPEVFDAYARTIMALA 119 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRSVGLPYAE 181 + E +LL+ +G+ +D Q L + P Sbjct: 120 DGETPELPLRRFEFLLLQALGYAVDFEYAADDESPIQPELLYGFERELGFVACERAPDPR 179 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN-IIHCHLLRENFLGK 235 + + L E D+ L A + ++ ALQ RE FL + Sbjct: 180 TLFLGAHLLAFAEGHFDSPPLLQAAKR----FSRLALQPYLGRRQLKSRELFLKR 230 >gi|332140213|ref|YP_004425951.1| DNA repair protein RecO [Alteromonas macleodii str. 'Deep ecotype'] gi|254790504|sp|B4RXN1|RECO_ALTMD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|327550235|gb|AEA96953.1| DNA repair protein RecO [Alteromonas macleodii str. 'Deep ecotype'] Length = 234 Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 74/233 (31%), Gaps = 12/233 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQ 64 A +L R Y E + I++ + + GR + ++ + + +LQ +R+ + Sbjct: 8 AYVLHRRPYRETSYIVDFFSLEEGRISAVAKGVKNSKSDKKSLLQPFQHLRLQLSGKSDL 67 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 V + L+ + + R +P+ +Y L + Sbjct: 68 KNLRHVESVA---PSISLTGTALFCAMYVNELTNRIMPQGLASDGVYSAYEAALLALRDE 124 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + I Q+E LL +G D T V + ++ + + + Sbjct: 125 ADIEVTLRQLEFALLDEMGLLPDFTSDVEYEMPIEENGRYHFQLDAGFIQIPDDVVGARG 184 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 + + L + S K A L L+ I RE F+ K Sbjct: 185 IPGTALLSLSQGEFTPLSKKVAKVLCRD-----LLKPLIGDKPLKSRELFMTK 232 >gi|167837345|ref|ZP_02464228.1| DNA repair protein RecO [Burkholderia thailandensis MSMB43] Length = 237 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 75/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L Y E +++++V+TR +GR + + + +LQ + ++W + Sbjct: 8 PGFVLHSYPYRETSLVVDVLTRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLSWSGKSE 67 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L+ L G L +F +P L+ + L Sbjct: 68 LRT---LTGAEWVGGMLPLAGDALLCGFYVNELLVKFCAREDPHPPLFQHYLVTLTRLAH 124 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-K 182 ++ E +LL+ G+ + L + V + VC + + Sbjct: 125 GEPPVQVLRSFERVLLRETGYAMTLKRTVARRAVEPGRLYVFDPQRGVCDAGSDVPSHWP 184 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 ++ + L EE + + L ++ L + L R+ + Sbjct: 185 VIAGQTLLDMEEDDYHRAQTVAQSKT----LMRFLLNTYLGGTPLATRQILIDL 234 >gi|153824252|ref|ZP_01976919.1| DNA repair protein RecO [Vibrio cholerae B33] gi|126518226|gb|EAZ75451.1| DNA repair protein RecO [Vibrio cholerae B33] Length = 160 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 52/150 (34%), Gaps = 5/150 (3%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + + R + LQ + + W + Sbjct: 9 FVLHRRPYSESSLILDVFSEEYGRVTLMAKGARGKRSNLKGALQPFTPLLLKWSGNGS-- 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + LS + + R L L+ L + Sbjct: 67 -MKTLRQAEPISLGLPLSGVYLYSAMYINELVDRVLMPEVASPGLFHDYLFALTELAQST 125 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + EL LL +G+G+D C TG Sbjct: 126 NPEPALRRFELALLAAMGYGVDFLHCAGTG 155 >gi|152985424|ref|YP_001350089.1| DNA repair protein RecO [Pseudomonas aeruginosa PA7] gi|166221905|sp|A6VAK4|RECO_PSEA7 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|150960582|gb|ABR82607.1| DNA repair protein RecO [Pseudomonas aeruginosa PA7] Length = 233 Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 72/229 (31%), Gaps = 12/229 (5%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLG 67 +L R Y E + +++ T GR +R + + + + + WR R Sbjct: 10 YVLHSRPYKETSALVDFFTA-QGRLRAVLRGARG-KAGALARPFVPLEAEWRGRGELKT- 66 Query: 68 EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI 127 + + LLS GL L R LP +P E++ L + Sbjct: 67 --VARLESAGIPNLLSGQALFSGLYLNELLIRLLPAEDPQPEIFAHYAATLPLLAAGRPL 124 Query: 128 GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLP 187 + E LL+ +G+G L + + + + Sbjct: 125 EPLLRAFEWRLLEQLGYGFALDVDIHGRPIEPQALYQLLPEAGL--EPVTQLQPGLFQGV 182 Query: 188 SFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHL-LRENFLGK 235 L + A +A + L + AL ++ L RE F+ + Sbjct: 183 ELLSMADADWSAPGALAAAKR----LMRQALAPHLGGRPLVSRELFMNR 227 >gi|253576084|ref|ZP_04853416.1| DNA repair protein RecO [Paenibacillus sp. oral taxon 786 str. D14] gi|251844427|gb|EES72443.1| DNA repair protein RecO [Paenibacillus sp. oral taxon 786 str. D14] Length = 249 Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats. Identities = 43/192 (22%), Positives = 74/192 (38%), Gaps = 2/192 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M ++ + I++ YGE N I+ + T G+ VR + + + + Q + Sbjct: 1 MLYRVEGIVIRSMDYGEGNKIITLCTETSGKIGVLVRGAKKVKSRHGALTQPFTHGEYVF 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + + E++ESH + L Y + L + L + E + L L Sbjct: 61 FRQNGGLGTLNQGEMIESHFSLREDLFLAAYASYACELLDKTLQDEEVGSFWFTQLKACL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + E+ +L+ G+G CV G D +VSP+ GG +CRS Sbjct: 121 DGLSSGKDPQIVTHLFEMKILQAAGYGPSFESCVSCGRVDDSPYVSPRLGGRLCRSCRHQ 180 Query: 179 YAEKMLVLPSFL 190 M V P L Sbjct: 181 DPAAMQVTPGVL 192 >gi|327479796|gb|AEA83106.1| DNA repair protein RecO [Pseudomonas stutzeri DSM 4166] Length = 229 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 71/231 (30%), Gaps = 12/231 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R Y E + ++++ T GR +R + + +++ + V R + Sbjct: 4 PAFVLHSRPYKESSALVDLFTP-QGRLRAVMRAARG-KAGSLIRPFVSLEVELRGKSELK 61 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + A L G+ L R LP + L++ L Sbjct: 62 T---VARLESAGPAHWLDGQALFSGMYLNELLIRLLPAEDAHPALFEHYVATLPALAEHR 118 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + + E LL +G+G L + + VG Sbjct: 119 PLEPLLRAFEWRLLDELGYGFALDIDIAGQPIDAQRLYRLVPDAGLEPVVGFQ-PGLFNG 177 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHL-LRENFLGK 235 E +L +A + L + AL ++ L RE F+ Sbjct: 178 AELLAMAEADWQVPGALAAAKR-----LMRQALAPHLGGRPLVSRELFMNL 223 >gi|146281617|ref|YP_001171770.1| DNA repair protein RecO [Pseudomonas stutzeri A1501] gi|172045571|sp|A4VIX7|RECO_PSEU5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|145569822|gb|ABP78928.1| DNA repair protein RecO [Pseudomonas stutzeri A1501] Length = 236 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 71/231 (30%), Gaps = 12/231 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R Y E + ++++ T GR +R + + +++ + V R + Sbjct: 11 PAFVLHSRPYKESSALVDLFTP-QGRLRAVMRAARG-KAGSLIRPFVSLEVELRGKSELK 68 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + A L G+ L R LP + L++ L Sbjct: 69 T---VARLESAGPAHWLDGQALFSGMYLNELLIRLLPAEDAHPALFEHYVATLPALAEHR 125 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + + E LL +G+G L + + VG Sbjct: 126 PLEPLLRAFEWRLLDELGYGFALDIDIAGQPIDAQRLYRLVPDAGLEPVVGFQ-PGLFNG 184 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHL-LRENFLGK 235 E +L +A + L + AL ++ L RE F+ Sbjct: 185 AELLAMAEADWQVPGALAAAKR-----LMRQALAPHLGGRPLVSRELFMNL 230 >gi|153839962|ref|ZP_01992629.1| DNA repair protein RecO [Vibrio parahaemolyticus AQ3810] gi|149746521|gb|EDM57510.1| DNA repair protein RecO [Vibrio parahaemolyticus AQ3810] Length = 162 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 54/150 (36%), Gaps = 5/150 (3%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L R Y E ++IL+V + +YGR + +S R + LQ + + W + + Sbjct: 13 FVLHRRPYSESSLILDVFSEEYGRITLMAKGARSKRSNLKGALQPFTPLLLKWSGKGS-- 70 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + L + + R L P L+ L Sbjct: 71 -MKTLRQAEPISLGLPLFGINLYSAMYVNELVGRVLMAEVPMPALFHDYLHALTELAQCE 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + EL LL ++G+G+D C TG Sbjct: 130 NPEPALRRFELALLSSMGYGVDFLHCAGTG 159 >gi|288941440|ref|YP_003443680.1| DNA repair protein RecO [Allochromatium vinosum DSM 180] gi|288896812|gb|ADC62648.1| DNA repair protein RecO [Allochromatium vinosum DSM 180] Length = 243 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 73/229 (31%), Gaps = 12/229 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQ 64 A +L R YG +++LE++ GR + + R +LQ + + R Sbjct: 10 AFVLHRREYGNTSLLLEILGAGQGRCAAIAKGARRPRRTASALLQPFQPLWLAMTGRGEV 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 V E+ L + L G L R L +P L+ L+ Sbjct: 70 RT---LTVVEEAGAPLALQGASLLAGFYLNELLLRMLARHDPHDALFVFYQSTLSHLAEA 126 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E LL +G+GL L + V G + C G ++ Sbjct: 127 DDLETPLRHFECRLLAELGYGLRLDRVVDDGAPVTADAVYVYERERGPCYPSGPARGPRV 186 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLREN 231 ++ + + + A L ++ L+ ++ RE Sbjct: 187 SGATLLALAHDEPLAGEQRREART-----LLRHVLEPHLGDRPLKSREL 230 >gi|328554262|gb|AEB24754.1| DNA repair protein RecO [Bacillus amyloliquefaciens TA208] gi|328912659|gb|AEB64255.1| DNA double strand break repair and recombination factor [Bacillus amyloliquefaciens LL3] Length = 255 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 64/179 (35%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-R 59 M + + I+L YGE N I+ ++TR++G+ R + + + + ++ Sbjct: 1 MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGARKSASRLSAVSQPFLYGSFLM 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + + E++ S L Y + E++P L++++ Sbjct: 61 QRTSGLGTLQQGEMILSMRTIREDLFLTAYAAFIAELTDKGTEEKKPNPYLFELILESFK 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + I +++ +L +G +L CV S + G +C Sbjct: 121 RLNEGTDPDVITFIVQMKMLGVMGLYPELNHCVHCKSRDGTFHFSVRDNGFICHRCFGK 179 >gi|312795544|ref|YP_004028466.1| DNA repair protein recO [Burkholderia rhizoxinica HKI 454] gi|312167319|emb|CBW74322.1| DNA repair protein recO [Burkholderia rhizoxinica HKI 454] Length = 308 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 72/238 (30%), Gaps = 15/238 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L Y E ++I++V TR +GR + + + +LQ + ++W + Sbjct: 75 PGFVLHTYPYRETSLIIDVFTRMHGRLALVAKGAKRPHSALRGVLQTFQPLALSWTGKSE 134 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + L+ L G L RF +P L+D + L Sbjct: 135 ---MRTLTRAEWVGGMRPLAGDALLCGFYVNELLVRFCAREDPHTALFDHYLLTLTRLAH 191 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 ++ E +LL+ G+ + L + V VC L Sbjct: 192 DEPAVQVLRSFERVLLRETGYAMSLDRTVARQNVVAGRSYVFDPERGVCDVEMLEPDAHA 251 Query: 184 LVLPS-----FLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 L P L E + + L ++ L + L R+ + Sbjct: 252 LRGPVIAGQTLLDMERDDYSRAQTVAQSKT----LMRFLLNTYLGGAPLATRQILIDL 305 >gi|148263002|ref|YP_001229708.1| DNA repair protein RecO [Geobacter uraniireducens Rf4] gi|189039657|sp|A5GBB7|RECO_GEOUR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|146396502|gb|ABQ25135.1| DNA replication and repair protein RecO [Geobacter uraniireducens Rf4] Length = 244 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 64/156 (41%), Gaps = 3/156 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR 59 Q +AI+LGV YGE + I+ + T ++G+ G R+ + R + L+ +R++ Sbjct: 3 NIQCEAIVLGVMDYGEADKIVTLFTLEHGKLKGLARSAKKSRKRFGGALEPFARLRLHLA 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 ++ + +++ + + + R +PE E L+ +L +L+ Sbjct: 63 MKVGLST-LNGADIVTIFPHIRQDLVKIGHAAYACELVERLVPEAEQNHRLFRLLAAYLD 121 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 E LLK +G+ L++C Sbjct: 122 HLDQFQHDPSDRRFFEANLLKVVGYQPALSRCAACD 157 >gi|307823641|ref|ZP_07653870.1| DNA repair protein RecO [Methylobacter tundripaludum SV96] gi|307735626|gb|EFO06474.1| DNA repair protein RecO [Methylobacter tundripaludum SV96] Length = 249 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 71/205 (34%), Gaps = 9/205 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLA 63 A IL R Y E ++I++V+TR +GR + + + + +LQ + V++ + Sbjct: 20 PAFILRHRKYRETSLIIDVLTRDFGRISLLAKGVRKAKSKTAGMLQPFIPLLVSYFGKAE 79 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + G + FL + +P E++ L+C Sbjct: 80 LKTLTDVEM---IQPFSEIKGLALYCGFYINELVGYFLHKYDPHPEVFGHYGECLSCLSD 136 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + Q EL L++ G+GL L + L +G V P++ K Sbjct: 137 GPNVEAALRQFELNLMECAGYGLQLEYDDNESPIESLKKYEFNAGKGAVEVVDGPFSGKT 196 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQL 208 L + D L A L Sbjct: 197 L----LALSSGELTDPQVLSEAKTL 217 >gi|238897757|ref|YP_002923436.1| gap repair protein, part of RecFOR complex [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259563680|sp|C4K3Z5|RECO_HAMD5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|229465514|gb|ACQ67288.1| gap repair protein, part of RecFOR complex [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 234 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 46/229 (20%), Positives = 74/229 (32%), Gaps = 12/229 (5%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 IL RSY E ++IL+++T GR + R + LQ + + W + A Sbjct: 9 FILHRRSYSETSLILDLLTENEGRISLIAKGALRPRSALKGYLQPFTPLLLRWSGKSAIK 68 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 A L+ GL L R L L+ L Sbjct: 69 TLCGAEP---ISIAVPLTGIFLYSGLYVNELLSRLLLPNIDYRALFFDYLDCLEALASAQ 125 Query: 126 VI-GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 + + EL LL ++G+G+D CV TG + Sbjct: 126 DTSERALRRFELALLTHLGYGVDFLHCVETGEPVVAQMTYRYQHEIGFIRSPEDDSLGFT 185 Query: 185 VLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + D ++LK+A + T + AL+ ++ H R F Sbjct: 186 GHQLQSLAKGAFYDQETLKAAKRFT-----RIALKPHLGHRPLNSRSLF 229 >gi|76810334|ref|YP_334274.1| DNA repair protein RecO [Burkholderia pseudomallei 1710b] gi|161723199|ref|YP_109019.2| DNA repair protein RecO [Burkholderia pseudomallei K96243] gi|254191247|ref|ZP_04897751.1| DNA repair protein RecO [Burkholderia pseudomallei Pasteur 52237] gi|254195774|ref|ZP_04902200.1| DNA repair protein RecO [Burkholderia pseudomallei S13] gi|76579787|gb|ABA49262.1| DNA repair protein RecO [Burkholderia pseudomallei 1710b] gi|157938919|gb|EDO94589.1| DNA repair protein RecO [Burkholderia pseudomallei Pasteur 52237] gi|169652519|gb|EDS85212.1| DNA repair protein RecO [Burkholderia pseudomallei S13] Length = 286 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 76/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E +++++V+TR +GR + + + +LQ + ++W + Sbjct: 57 PAFVLHSYPYRETSLVIDVLTRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLSWSGKSE 116 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L+ L G + L +F +P L+ + L Sbjct: 117 LRT---LTGAEWVGGMLPLAGDALLCGFYANELLVKFCAREDPHPPLFQHYLVTLTRLAH 173 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-K 182 ++ E +LL+ G+ + L + V + V + + Sbjct: 174 GEPPVQVLRSFERVLLRETGYAMTLKRTVARRAVEPDKLYVFDPQRGVRDAGSDAPSHWP 233 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 ++ + L EE + + L ++ L + L R+ + Sbjct: 234 VIAGQTLLDMEEDDYHRAQTVAQSKT----LMRFLLNTYLGGTPLATRQILIDL 283 >gi|53725349|ref|YP_102341.1| DNA repair protein RecO [Burkholderia mallei ATCC 23344] gi|52428772|gb|AAU49365.1| Recombination protein O [Burkholderia mallei ATCC 23344] Length = 286 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 76/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E +++++V+TR +GR + + + +LQ + ++W + Sbjct: 57 PAFVLHSYPYRETSLVIDVLTRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLSWSGKSE 116 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L+ L G + L +F +P L+ + L Sbjct: 117 LRT---LTGAEWVGGMLPLAGDALLCGFYANELLVKFCAREDPHPPLFQHYLVTLTRLAH 173 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-K 182 ++ E +LL+ G+ + L + V + V + + Sbjct: 174 GEPPVQVLRSFERVLLRETGYAMTLKRTVARRAVEPDKLYVFDPQRGVRDAGSDAPSHWP 233 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 ++ + L EE + + L ++ L + L R+ + Sbjct: 234 VIAGQTLLDMEEDDYHRAQTVAQSKT----LMRFLLNTYLGGTPLATRQILIDL 283 >gi|67641138|ref|ZP_00439923.1| DNA repair protein RecO [Burkholderia mallei GB8 horse 4] gi|121600755|ref|YP_993768.1| DNA repair protein RecO [Burkholderia mallei SAVP1] gi|124384477|ref|YP_001028766.1| DNA repair protein RecO [Burkholderia mallei NCTC 10229] gi|126448568|ref|YP_001081326.1| DNA repair protein RecO [Burkholderia mallei NCTC 10247] gi|167000781|ref|ZP_02266588.1| DNA repair protein RecO [Burkholderia mallei PRL-20] gi|254178235|ref|ZP_04884890.1| DNA repair protein RecO [Burkholderia mallei ATCC 10399] gi|254199234|ref|ZP_04905600.1| DNA repair protein RecO [Burkholderia mallei FMH] gi|254205541|ref|ZP_04911893.1| DNA repair protein RecO [Burkholderia mallei JHU] gi|254357708|ref|ZP_04973981.1| DNA repair protein RecO [Burkholderia mallei 2002721280] gi|61214835|sp|Q62LS7|RECO_BURMA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|121229565|gb|ABM52083.1| DNA repair protein RecO [Burkholderia mallei SAVP1] gi|124292497|gb|ABN01766.1| DNA repair protein RecO [Burkholderia mallei NCTC 10229] gi|126241438|gb|ABO04531.1| DNA repair protein RecO [Burkholderia mallei NCTC 10247] gi|147748830|gb|EDK55904.1| DNA repair protein RecO [Burkholderia mallei FMH] gi|147752984|gb|EDK60049.1| DNA repair protein RecO [Burkholderia mallei JHU] gi|148026835|gb|EDK84856.1| DNA repair protein RecO [Burkholderia mallei 2002721280] gi|160699274|gb|EDP89244.1| DNA repair protein RecO [Burkholderia mallei ATCC 10399] gi|238522003|gb|EEP85450.1| DNA repair protein RecO [Burkholderia mallei GB8 horse 4] gi|243063331|gb|EES45517.1| DNA repair protein RecO [Burkholderia mallei PRL-20] Length = 275 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 76/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E +++++V+TR +GR + + + +LQ + ++W + Sbjct: 46 PAFVLHSYPYRETSLVIDVLTRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLSWSGKSE 105 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L+ L G + L +F +P L+ + L Sbjct: 106 LRT---LTGAEWVGGMLPLAGDALLCGFYANELLVKFCAREDPHPPLFQHYLVTLTRLAH 162 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-K 182 ++ E +LL+ G+ + L + V + V + + Sbjct: 163 GEPPVQVLRSFERVLLRETGYAMTLKRTVARRAVEPDKLYVFDPQRGVRDAGSDAPSHWP 222 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 ++ + L EE + + L ++ L + L R+ + Sbjct: 223 VIAGQTLLDMEEDDYHRAQTVAQSKT----LMRFLLNTYLGGTPLATRQILIDL 272 >gi|126440516|ref|YP_001059798.1| DNA repair protein RecO [Burkholderia pseudomallei 668] gi|126452734|ref|YP_001067085.1| DNA repair protein RecO [Burkholderia pseudomallei 1106a] gi|134277090|ref|ZP_01763805.1| DNA repair protein RecO [Burkholderia pseudomallei 305] gi|167720556|ref|ZP_02403792.1| DNA repair protein RecO [Burkholderia pseudomallei DM98] gi|167816750|ref|ZP_02448430.1| DNA repair protein RecO [Burkholderia pseudomallei 91] gi|167825157|ref|ZP_02456628.1| DNA repair protein RecO [Burkholderia pseudomallei 9] gi|167846654|ref|ZP_02472162.1| DNA repair protein RecO [Burkholderia pseudomallei B7210] gi|167895242|ref|ZP_02482644.1| DNA repair protein RecO [Burkholderia pseudomallei 7894] gi|167903625|ref|ZP_02490830.1| DNA repair protein RecO [Burkholderia pseudomallei NCTC 13177] gi|167911874|ref|ZP_02498965.1| DNA repair protein RecO [Burkholderia pseudomallei 112] gi|167919871|ref|ZP_02506962.1| DNA repair protein RecO [Burkholderia pseudomallei BCC215] gi|217421115|ref|ZP_03452620.1| DNA repair protein RecO [Burkholderia pseudomallei 576] gi|226199969|ref|ZP_03795519.1| DNA repair protein RecO [Burkholderia pseudomallei Pakistan 9] gi|237813193|ref|YP_002897644.1| DNA repair protein RecO [Burkholderia pseudomallei MSHR346] gi|242316189|ref|ZP_04815205.1| DNA repair protein RecO [Burkholderia pseudomallei 1106b] gi|254184212|ref|ZP_04890802.1| DNA repair protein RecO [Burkholderia pseudomallei 1655] gi|254258139|ref|ZP_04949193.1| DNA repair protein RecO [Burkholderia pseudomallei 1710a] gi|254296873|ref|ZP_04964326.1| DNA repair protein RecO [Burkholderia pseudomallei 406e] gi|61214848|sp|Q63S98|RECO_BURPS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361449|sp|Q3JQ79|RECO_BURP1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|52210447|emb|CAH36430.1| DNA repair protein RecO [Burkholderia pseudomallei K96243] gi|126220009|gb|ABN83515.1| DNA repair protein RecO [Burkholderia pseudomallei 668] gi|126226376|gb|ABN89916.1| DNA repair protein RecO [Burkholderia pseudomallei 1106a] gi|134250740|gb|EBA50819.1| DNA repair protein RecO [Burkholderia pseudomallei 305] gi|157807319|gb|EDO84489.1| DNA repair protein RecO [Burkholderia pseudomallei 406e] gi|184214743|gb|EDU11786.1| DNA repair protein RecO [Burkholderia pseudomallei 1655] gi|217396527|gb|EEC36544.1| DNA repair protein RecO [Burkholderia pseudomallei 576] gi|225928025|gb|EEH24062.1| DNA repair protein RecO [Burkholderia pseudomallei Pakistan 9] gi|237503117|gb|ACQ95435.1| DNA repair protein RecO [Burkholderia pseudomallei MSHR346] gi|242139428|gb|EES25830.1| DNA repair protein RecO [Burkholderia pseudomallei 1106b] gi|254216828|gb|EET06212.1| DNA repair protein RecO [Burkholderia pseudomallei 1710a] Length = 275 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 76/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E +++++V+TR +GR + + + +LQ + ++W + Sbjct: 46 PAFVLHSYPYRETSLVIDVLTRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLSWSGKSE 105 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L+ L G + L +F +P L+ + L Sbjct: 106 LRT---LTGAEWVGGMLPLAGDALLCGFYANELLVKFCAREDPHPPLFQHYLVTLTRLAH 162 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-K 182 ++ E +LL+ G+ + L + V + V + + Sbjct: 163 GEPPVQVLRSFERVLLRETGYAMTLKRTVARRAVEPDKLYVFDPQRGVRDAGSDAPSHWP 222 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 ++ + L EE + + L ++ L + L R+ + Sbjct: 223 VIAGQTLLDMEEDDYHRAQTVAQSKT----LMRFLLNTYLGGTPLATRQILIDL 272 >gi|186475608|ref|YP_001857078.1| DNA repair protein RecO [Burkholderia phymatum STM815] gi|184192067|gb|ACC70032.1| DNA repair protein RecO [Burkholderia phymatum STM815] Length = 336 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 76/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V++R +GR + + + +LQ + +NW + Sbjct: 107 PAFVLHSYPYRETSLIIDVLSRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLNWSGKSE 166 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L+ L G L +FL +P +L+ + L Sbjct: 167 ---MRTLTGAEWVGGMLPLTGDALLCGFYVNELLVKFLAREDPHPQLFHHYVVTLTRLAH 223 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-K 182 ++ E +LL+ G+ + L + V V + + Sbjct: 224 DEPPVQVLRSFERVLLRETGYAMSLNRTVARKAVVPDGRYVFDPERGVREASDEYPSNWP 283 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 ++ + L E+ + + L ++ L + L R+ + Sbjct: 284 VISGQTLLDMEQDDYHRAQTIAQSKT----LMRFLLNIYLGGTPLATRQILIDL 333 >gi|311069128|ref|YP_003974051.1| DNA repair protein RecO [Bacillus atrophaeus 1942] gi|310869645|gb|ADP33120.1| DNA repair protein RecO [Bacillus atrophaeus 1942] Length = 255 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 69/188 (36%), Gaps = 1/188 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-R 59 M + + I+L YGE N I+ ++TR++G+ R + + + + ++ Sbjct: 1 MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGAKKTNSRLSAVSQPFLYGSFLM 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + + E++ S L Y + + E++P L++++ L Sbjct: 61 QKTSGLGTLQQGEMILSMRGIREDLFLTAYAAFIAELVDKGTEEKKPNPYLFELILESLK 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 I +++ +L IG +L CV S + G +C Sbjct: 121 RLNEGIDPDVITFIVQMKMLGVIGLYPELNHCVHCQSQDGTFHFSVRDNGFICHRCFGKD 180 Query: 180 AEKMLVLP 187 K+ + P Sbjct: 181 PYKVPITP 188 >gi|332994406|gb|AEF04461.1| DNA repair protein RecO [Alteromonas sp. SN2] Length = 236 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 35/235 (14%), Positives = 72/235 (30%), Gaps = 15/235 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLA 63 A +L R+Y E + I++ T + G+ + ++ + + +LQ +++ + Sbjct: 7 TAFVLHRRAYRETSYIVDFFTLEQGKVSAVAKGVRNSKSDKKSLLQPFQALKLQLAGKSD 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + L + + R +P +++ L Sbjct: 67 LKNLRHVESTA---PSINLVGTPLFCAMYLNELTNRIMPAGLASDAVFEAYGQALTALFS 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVC---RSVGLPY 179 I + EL LL +G D T+ V + + + C V + Sbjct: 124 DDDIEITLRKFELSLLDEMGLLPDFTEDVEYEMPIEAEKHYVLQPEFGFCALPDDVSNSH 183 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFL 233 K L + L + S + L + L+ I RE F+ Sbjct: 184 TRKGLPGSALLALAQGEFTPMS-----KRVAKVLCRDLLKPLIGDKPLKSRELFV 233 >gi|325523760|gb|EGD02014.1| DNA repair protein RecO [Burkholderia sp. TJI49] Length = 279 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 76/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V+TR +GR + + + +LQ + ++W + Sbjct: 50 PAFVLHSYPYRETSLIIDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKSE 109 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L L G + L +F +P L++ + L Sbjct: 110 VRT---LTGAEWVGGMLPLGGDALLCGFYANELLVKFCAREDPQPPLFNHYVLTLTRLAH 166 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-K 182 ++ E +LL+ G+ + L + V + V + + Sbjct: 167 GEPAVQVLRSFERVLLRETGYAMALNRTVARRAVEPERRYVFDPERGVRNADDDVPSHWP 226 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 ++ + L E+ + + L ++ L + L R+ + Sbjct: 227 VISGQTLLDMEQDDYHRAQTVAQSKT----LMRFLLNTYLGGTPLATRQILIDL 276 >gi|206559400|ref|YP_002230161.1| DNA repair protein RecO [Burkholderia cenocepacia J2315] gi|206561198|ref|YP_002231963.1| DNA repair protein RecO [Burkholderia cenocepacia J2315] gi|198035438|emb|CAR51314.1| DNA repair protein RecO 2 [Burkholderia cenocepacia J2315] gi|198037240|emb|CAR53162.1| DNA repair protein RecO 1 [Burkholderia cenocepacia J2315] Length = 278 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 76/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V+TR +GR + + + +LQ + ++W + Sbjct: 49 PAFVLHSYPYRETSLIVDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKSE 108 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L L G + L +F +P L++ + L Sbjct: 109 VRT---LTGAEWVGGMLPLGGDGLLCGFYANELLVKFCAREDPQPPLFNHYVLTLTRLAH 165 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-K 182 ++ E +LL+ G+ + L + V + V + + Sbjct: 166 GEPAVQVLRSFERVLLRETGYAMALNRTVARRAVEPERRYVFDPERGVRNADDDVPSHWP 225 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 ++ + L E+ + + L ++ L + L R+ + Sbjct: 226 VITGQTLLDMEQDDYHRAQTVAQSKT----LMRFLLNTYLGGTPLATRQILIDL 275 >gi|107022212|ref|YP_620539.1| DNA repair protein RecO [Burkholderia cenocepacia AU 1054] gi|116689158|ref|YP_834781.1| DNA repair protein RecO [Burkholderia cenocepacia HI2424] gi|170732446|ref|YP_001764393.1| DNA repair protein RecO [Burkholderia cenocepacia MC0-3] gi|254245909|ref|ZP_04939230.1| Recombination protein O, RecO [Burkholderia cenocepacia PC184] gi|119361448|sp|Q1BXT9|RECO_BURCA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|105892401|gb|ABF75566.1| DNA replication and repair protein RecO [Burkholderia cenocepacia AU 1054] gi|116647247|gb|ABK07888.1| DNA replication and repair protein RecO [Burkholderia cenocepacia HI2424] gi|124870685|gb|EAY62401.1| Recombination protein O, RecO [Burkholderia cenocepacia PC184] gi|169815688|gb|ACA90271.1| DNA repair protein RecO [Burkholderia cenocepacia MC0-3] Length = 278 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 76/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V+TR +GR + + + +LQ + ++W + Sbjct: 49 PAFVLHSYPYRETSLIVDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKSE 108 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L L G + L +F +P L++ + L Sbjct: 109 VRT---LTGAEWVGGMLPLGGDGLLCGFYANELLVKFCAREDPQPPLFNHYVLTLTRLAH 165 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-K 182 ++ E +LL+ G+ + L + V + V + + Sbjct: 166 GEPAVQVLRSFERVLLRETGYAMALNRTVARRAVEPERRYVFDPERGVRNADDDVPSHWP 225 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 ++ + L E+ + + L ++ L + L R+ + Sbjct: 226 VITGQTLLDMEQDDYHRAQTVAQSKT----LMRFLLNTYLGGTPLATRQILIDL 275 >gi|260752832|ref|YP_003225725.1| DNA repair protein RecO [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283856306|ref|YP_162408.2| DNA repair protein RecO [Zymomonas mobilis subsp. mobilis ZM4] gi|258552195|gb|ACV75141.1| DNA repair protein RecO [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283775302|gb|AAV89297.2| DNA repair protein RecO [Zymomonas mobilis subsp. mobilis ZM4] Length = 254 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 110/243 (45%), Gaps = 11/243 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 + A++L R + E I+ ++T + G G+++ S +P+L GN V+ +WR ++ Sbjct: 4 ISEPALLLTSRFHSENGAIIRLLT-EQGLLTGYIQGAHSRYRRPLLFVGNYVQASWRDKV 62 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLNCH 121 ++L E L ++ L L I P LPE +P L+ L L Sbjct: 63 GRSLPSINIE-LRHSRGLIMEHPLAALFLSWICPFTASVLPEGQPEPYLFQNLKRLLAII 121 Query: 122 ---KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 P + V+ EL+LL +G+GL L++C++TG L WVSPK AV R Sbjct: 122 EKTDEPVLWMTELVRFELLLLSELGYGLHLSRCIITGQEACLDWVSPKHHAAVSRQAAQG 181 Query: 179 YAEKMLVLPSFL-----WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 + +K+LVLP FL D ++L+ +L+ +FL + +R+ + Sbjct: 182 HEKKLLVLPDFLKAPFSVSCLDLPDQEALQQGLKLSGFFLRFHFEAAYYHRFFGVRQRLI 241 Query: 234 GKL 236 Sbjct: 242 KNF 244 >gi|82702880|ref|YP_412446.1| DNA repair protein RecO [Nitrosospira multiformis ATCC 25196] gi|119361469|sp|Q2Y867|RECO_NITMU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|82410945|gb|ABB75054.1| DNA replication and repair protein RecO [Nitrosospira multiformis ATCC 25196] Length = 242 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 78/240 (32%), Gaps = 15/240 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E ++I+EV T+ GR + + + +L+A + ++W + Sbjct: 12 PAFVLHSYPYLETSLIVEVFTQNSGRIAVVAKGAKRPTSPLRGLLRAFQPLLLSWGGKSE 71 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + L + + G L R L +P L+ L+ Sbjct: 72 LRTLH---KAEWQGGQLPLQGTALICGFYLNELLIRLLHRNDPHERLFACYQEALSDLST 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 S I + E LL+ +G+ L L V +G + P A Sbjct: 129 ASDYIPILRRFEQRLLQEMGYALTLDHDVSSGKP------IKPTQMYCYEIERGPIASSN 182 Query: 184 LVLPSFLWKEEQTI---DADSLKSAF-QLTDYFLNKYALQHNIIHCHLLRENFLGKLLEL 239 P L +T+ + +L L ++ L H + L L + +L Sbjct: 183 GSCPFNLELSGKTLLDMYQGDYLAPLTRLQSRILMRHLLSHYLGDKPLHTRQLLKEFQQL 242 >gi|56459916|ref|YP_155197.1| recombinational DNA repair protein RecO, RecF pathway [Idiomarina loihiensis L2TR] gi|61214745|sp|Q5R108|RECO_IDILO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|56178926|gb|AAV81648.1| Recombinational DNA repair protein RecO, RecF pathway [Idiomarina loihiensis L2TR] Length = 234 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 71/231 (30%), Gaps = 10/231 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A++L Y E ++IL++ T GR + + + + + Q + ++ R Sbjct: 4 RALVLHRWDYQETSLILDLFTEDKGRVRVVAKGAKRPKSPWRGLAQPFMPLLAEFQGRSD 63 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ LL G + R +P EL++ L Sbjct: 64 LKTLTLLEPQ-QTTQKLLLQGDKLYSGFYLNELIQRLVPTEAEAPELFESYLSALQNMTN 122 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVCRSVGLPYAEK 182 + Q E LL+++G D TG D W + Sbjct: 123 SERVEPALRQFEWQLLQHLGAAFDWHYDADTGNVLSDSKWCYFIPDHGFVTQAR---DNQ 179 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 ++ D D ++ +L Y + + AL + RE F Sbjct: 180 QRAYSVADIQKLAAWDVDD-ENRLRLLKYIM-RDALAVYLGDKPLRSRELF 228 >gi|237748851|ref|ZP_04579331.1| DNA repair protein recO [Oxalobacter formigenes OXCC13] gi|229380213|gb|EEO30304.1| DNA repair protein recO [Oxalobacter formigenes OXCC13] Length = 265 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 75/237 (31%), Gaps = 10/237 (4%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWR 59 + +L Y E +++++V TR YGR + + R++ +LQ + + W Sbjct: 33 IVEQPGFVLHSYVYKESSLVVDVFTRDYGRVALVAKGAKRPTSRLRGVLQTFQPLSIGWT 92 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + L +S LYG L + +P L+D LN Sbjct: 93 GKSELRT---LTTAEWIGGMIPLENSALLYGFYLNELLLKLTAREDPHHLLFDHYVKALN 149 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + EL LLK G DL+ T D V R + Sbjct: 150 RLATSESAQTVLRIFELALLKETGVAADLSIDTTTRQKVDPEEVYVVDPENGPRPARMGD 209 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 + + L + QL L +Y L H++ L R+ L Sbjct: 210 EAPRMAGKTLLDMVCEDYSDQQ----TQLQSKLLMRYLLAHHLNGVPLQTRKILLDL 262 >gi|114567078|ref|YP_754232.1| DNA repair protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|119361496|sp|Q0AWP3|RECO_SYNWW RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|114338013|gb|ABI68861.1| DNA replication and repair protein RecO [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 250 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 80/227 (35%), Gaps = 11/227 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNW 58 MY + AI++ Y E + ++ + G+ R + R + +Q + + Sbjct: 1 MYLRSRAIVIKNMDYRESDKLVTIFCEHEGKMKAVARGIKKPRSSLRACVQPFCHSSL-F 59 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 SR + ++L+ + LY L + L + L E LY L Sbjct: 60 FSRGKGMNLITQGKLLDFYGNTREDFERSLYALYLMELLDKSLMEGVAIPRLYTSTLEVL 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + E+ LL N+G+ L CV+ G DL S GG +CR Sbjct: 120 SHLNHSGYNPMLIRYFEMNLLVNLGYSPLLDHCVLCGKKDDLKVFSLPDGGMLCRDCSYQ 179 Query: 179 YAE-----KMLVLPSFLWKEEQTIDADSL---KSAFQLTDYFLNKYA 217 + K + L + + + A + +YFL KY Sbjct: 180 ASGAVSLSKETLALISLLGRSRLATVERVRVSNKAQKELEYFLEKYL 226 >gi|167581153|ref|ZP_02374027.1| DNA repair protein RecO [Burkholderia thailandensis TXDOH] Length = 275 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 75/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L Y E +++++V+TR +GR + + + +LQ + ++W + Sbjct: 46 PGFVLHSYPYRETSLVIDVLTRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLSWSGKSE 105 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L+ L G + L +F +P L+ + L Sbjct: 106 LRT---LTGAEWVGGMLPLAGDALLCGFYANELLVKFCAREDPHPPLFQHYLVTLTRLAH 162 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL--PYAE 181 ++ E +LL+ G+ + L + V + V + P+ Sbjct: 163 GEPPVQVLRSFERVLLRETGYAMTLKRTVARRAVEPGKLYVFDPERGVRDADSDVPPHWP 222 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 + +E+ A ++ + L + LN Y R+ + Sbjct: 223 VIAGQTLLDMEEDDYHRAQTVAQSKTLMRFLLNTYL----GGTPLATRQILIDL 272 >gi|167619238|ref|ZP_02387869.1| DNA repair protein RecO [Burkholderia thailandensis Bt4] gi|257138460|ref|ZP_05586722.1| DNA repair protein RecO [Burkholderia thailandensis E264] gi|119361451|sp|Q2SXT2|RECO_BURTA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 275 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 75/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L Y E +++++V+TR +GR + + + +LQ + ++W + Sbjct: 46 PGFVLHSYPYRETSLVIDVLTRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLSWSGKSE 105 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L+ L G + L +F +P L+ + L Sbjct: 106 LRT---LTGAEWVGGMLPLAGDALLCGFYANELLVKFCAREDPHPPLFQHYLVTLTRLAH 162 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL--PYAE 181 ++ E +LL+ G+ + L + V + V + P+ Sbjct: 163 GEPPVQVLRSFERVLLRETGYAMTLKRTVARRAVEPGKLYVFDPERGVRDADSDVPPHWP 222 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 + +E+ A ++ + L + LN Y R+ + Sbjct: 223 VIAGQTLLDMEEDDYHRAQTVAQSKTLMRFLLNTYL----GGTPLATRQILIDL 272 >gi|83720218|ref|YP_442267.1| DNA repair protein RecO [Burkholderia thailandensis E264] gi|83654043|gb|ABC38106.1| DNA repair protein RecO [Burkholderia thailandensis E264] Length = 286 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 75/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L Y E +++++V+TR +GR + + + +LQ + ++W + Sbjct: 57 PGFVLHSYPYRETSLVIDVLTRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLSWSGKSE 116 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L+ L G + L +F +P L+ + L Sbjct: 117 LRT---LTGAEWVGGMLPLAGDALLCGFYANELLVKFCAREDPHPPLFQHYLVTLTRLAH 173 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL--PYAE 181 ++ E +LL+ G+ + L + V + V + P+ Sbjct: 174 GEPPVQVLRSFERVLLRETGYAMTLKRTVARRAVEPGKLYVFDPERGVRDADSDVPPHWP 233 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 + +E+ A ++ + L + LN Y R+ + Sbjct: 234 VIAGQTLLDMEEDDYHRAQTVAQSKTLMRFLLNTYL----GGTPLATRQILIDL 283 >gi|119476419|ref|ZP_01616770.1| DNA repair protein RecO [marine gamma proteobacterium HTCC2143] gi|119450283|gb|EAW31518.1| DNA repair protein RecO [marine gamma proteobacterium HTCC2143] Length = 239 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 80/246 (32%), Gaps = 22/246 (8%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ-----SHRMQPILQAGNLV 54 M + A IL R++ + ++I++ ++ YGR G V+ + + + + + Q + Sbjct: 1 MRIESQPAYILHTRNFRDSSLIVDFLSADYGRVSGVVKGVRATSKSAKQRRGLSQPFVPL 60 Query: 55 RVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 ++W + L GL L R L + + +Y + Sbjct: 61 LISWSGKSDLKTIIQMEPR---GAPLQLQGKRLFSGLYVNELLSRLLQQDDQHTAIYTLY 117 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR- 173 C S I + Q EL L++ +G+GLD T+ T G Sbjct: 118 EWIAKCLVGDSEIDIVLRQFELQLMEYLGYGLDFTQEAETDNPIIPDRYYVYRAGEGLFA 177 Query: 174 ------SVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH- 226 + + L ++ A + + AL+ ++ Sbjct: 178 VPDAELASRGHLVNRTFQGEDLLAIASGAFTDNARHVAKLIC-----RQALRLHLGEKPL 232 Query: 227 LLRENF 232 RE F Sbjct: 233 KSRELF 238 >gi|169829165|ref|YP_001699323.1| DNA repair protein RecO [Lysinibacillus sphaericus C3-41] gi|168993653|gb|ACA41193.1| DNA repair protein recO (Recombination protein O) [Lysinibacillus sphaericus C3-41] Length = 272 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 83/246 (33%), Gaps = 9/246 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + + I+L VR+YGE N I+ ++TR+ G+ R + + + Sbjct: 11 MLHKWEGIVLKVRAYGESNKIVTLLTREAGKVATMARGAKKPSSRLASVTQPFTYGMFMV 70 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +G + E L S Y + + R + E +P +D+L L Sbjct: 71 QHHTGMGTLQQGEHLNSMRHIREDIMATAYASYIMELVERVVEEGKPEPFAFDVLLQALQ 130 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL-- 177 + I + E +L G L C G S GG +C Sbjct: 131 AIEDGYDPESITLFAEWKMLPYTGVQPILHACAACGAVDGEFAFSFAQGGFLCHRCYQHD 190 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSA--FQLTDYFLNK---YALQHNIIHCHLLRENF 232 PY ++ L + T+ D + + T YF+ K + R F Sbjct: 191 PYIIRLTPTQLKLIRMFYTVPIDQIGKIELKKETKYFIKKIITTIYEEQTGIRFKTR-KF 249 Query: 233 LGKLLE 238 + +L Sbjct: 250 IEQLER 255 >gi|126652273|ref|ZP_01724452.1| DNA repair protein RecO [Bacillus sp. B14905] gi|126591005|gb|EAZ85117.1| DNA repair protein RecO [Bacillus sp. B14905] Length = 262 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 83/246 (33%), Gaps = 9/246 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + + I+L VR+YGE N I+ ++TR+ G+ R + + + Sbjct: 1 MLHKWEGIVLKVRAYGESNKIVTLLTREAGKVATMARGAKKPSSRLASVTQPFTYGMFMV 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +G + E L S Y + + R + E +P +D+L L Sbjct: 61 QHHTGMGTLQQGEHLNSMRHIREDIMATAYASYIMELVERVVEEGKPEPFAFDVLLQALQ 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL-- 177 + I + E +L G L C G S GG +C Sbjct: 121 AIEDGYDPESITLFAEWKMLPYTGVQPILHACAACGAVDGEFAFSFAQGGFLCHRCYQHD 180 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSA--FQLTDYFLNK---YALQHNIIHCHLLRENF 232 PY ++ L + T+ D + + T YF+ K + R F Sbjct: 181 PYIIRLTPTQLKLIRMFYTVPIDQIGKIELKKETKYFIKKIITTIYEEQTGIRFKTR-KF 239 Query: 233 LGKLLE 238 + +L Sbjct: 240 IEQLER 245 >gi|241761300|ref|ZP_04759388.1| DNA repair protein RecO [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374207|gb|EER63704.1| DNA repair protein RecO [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 254 Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 11/243 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 + A++L R + E I+ ++T + G G+++ S +P+L GN V+ +WR ++ Sbjct: 4 ISEPALLLTSRFHSENGAIIRLLT-EQGLLTGYIQGAHSRYRRPLLFVGNYVQASWRDKV 62 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIFLNCH 121 ++L E L ++ L L I P LPE +P L+ L L Sbjct: 63 GRSLPSINIE-LRHSRGLIMEHPLAALFLSWICPFTASVLPEGQPEPYLFQNLKRLLAII 121 Query: 122 ---KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 P + V+ EL+LL +G+GL L++C++TG L WVSPK AV R Sbjct: 122 EKTDEPVLWMTELVRFELLLLSELGYGLHLSRCIITGQEACLDWVSPKHHAAVSRQAAQG 181 Query: 179 YAEKMLVLPSFL-----WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 + +K+LVLP FL D +SL+ +L+ +FL + +R+ + Sbjct: 182 HEKKLLVLPDFLKAPFSVSCLDLPDQESLQQGLKLSGFFLRFHFEAAYYHRFFWVRQRLI 241 Query: 234 GKL 236 Sbjct: 242 KNF 244 >gi|158320288|ref|YP_001512795.1| DNA repair protein RecO [Alkaliphilus oremlandii OhILAs] gi|172048003|sp|A8MG71|RECO_ALKOO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|158140487|gb|ABW18799.1| DNA repair protein RecO [Alkaliphilus oremlandii OhILAs] Length = 246 Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 37/239 (15%), Positives = 73/239 (30%), Gaps = 21/239 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR- 59 M + IL R +GE + IL + TR+ G+ + + + + + Sbjct: 1 MLITTEGFILKNRKFGETDSILTIFTRKAGKITAIAKGARRPKSNLLAGIQPFCYSEFVL 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + E E Y + + E + L+++ L Sbjct: 61 YKGKNMYTVSQCEAKEIFYPLREDLKRLSYASYLVELVEAVTTEGQTNHRLFNLFGKTLF 120 Query: 120 CHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP-------KSGGAV 171 K + I I E+ L+ +G+ L CV + W S Sbjct: 121 LLKKSDIEINPIVRAFEIKLMNYLGYKPQLMSCVNCDSKETTAWKFSATEGGLLCSSCYS 180 Query: 172 CRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDY-------FLNKYALQHNII 223 + + + L FL + D ++ +++D+ L +Y L H Sbjct: 181 ADLFAMKISNTAVKLAIFLLMK----DITEVQK-LKISDHLNEELKKILKQYILTHTNK 234 >gi|78224139|ref|YP_385886.1| recombination protein O, RecO [Geobacter metallireducens GS-15] gi|119361460|sp|Q39RG3|RECO_GEOMG RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|78195394|gb|ABB33161.1| DNA replication and repair protein RecO [Geobacter metallireducens GS-15] Length = 244 Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 58/155 (37%), Gaps = 3/155 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSR 61 + +AI+L Y E + I+ + T QYG+ G + + R P L+ + V R Sbjct: 5 RTEAIVLAAMDYRESDRIVTLFTLQYGKVRGVAKGAKRSARRFGPALEPFARIGVELVVR 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 +++ + ++ + R+LP+ P L+ +L+ +L Sbjct: 65 -EGLSSLRGADIVTLYPGIRRDLRAIGLAGYAVELVDRYLPDGAPSPRLFRLLSSYLERL 123 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + E L +G+ + L C GV Sbjct: 124 DQGEPLPSDRRFFEANFLNILGYRISLDHCASCGV 158 >gi|254490789|ref|ZP_05103972.1| DNA repair protein RecO [Methylophaga thiooxidans DMS010] gi|224463961|gb|EEF80227.1| DNA repair protein RecO [Methylophaga thiooxydans DMS010] Length = 234 Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 76/236 (32%), Gaps = 13/236 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M A +L R + E +++++ +TR +GR R + + + +LQ + ++W Sbjct: 1 MELTS-AFVLHHRPFRETSLLVDALTRDHGRVSLVARGMRQQKKRQSHVLQLFQPLWISW 59 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + A L L GL L R LP +E +YD L Sbjct: 60 YGYSELHTLGQAEASE---SAFRLIGKASLCGLYLNELLVRLLPIQESEPVIYDAYYQAL 116 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT-GVTQDLLWVSPKSGGAVCRSVGL 177 + + E LL +G+GL L + +D R + Sbjct: 117 QSLQQNENEQVVLRLFEKRLLAELGYGLVLRHEAGSLTPIEDNGLYRYLPDSGPQRQLNA 176 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + EE D SLK + + + + + R+ F Sbjct: 177 GKEPSVSGRSLRQLDEEDGFDETSLKEIK-----IMMRTVINYYLGGKPLHSRQLF 227 >gi|330722062|gb|EGG99980.1| DNA recombination and repair protein RecO [gamma proteobacterium IMCC2047] Length = 234 Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 71/225 (31%), Gaps = 10/225 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L R Y E ++I++ + GR VR + + + +LQ + ++W + Sbjct: 9 QAYVLHTRHYRETSLIVDFLVPDVGRISAVVRGARRPKSPQRSLLQPFGRLLISWYGKGE 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + L G+ L R + EPC L+ L + Sbjct: 69 LKTLKVLESDNQLVG---LRGRALFSGMYLNELLVRLIKAEEPCETLFVNYQQALFELRE 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + + + E LL+ +G+ + T + + V + + Sbjct: 126 AESVEPVLRRFERQLLQTLGYWMGFPD-SDTEQVNCFYFDTDSQWLPVAETPTQAQQARC 184 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL 228 + + A+ A + L + AL + L Sbjct: 185 FLTADLAAIAQDDYSAEQTLRAAKR----LMRLALAPLLGDKPLS 225 >gi|154686788|ref|YP_001421949.1| DNA repair protein RecO [Bacillus amyloliquefaciens FZB42] gi|166221883|sp|A7Z6U2|RECO_BACA2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|154352639|gb|ABS74718.1| RecO [Bacillus amyloliquefaciens FZB42] Length = 255 Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 69/188 (36%), Gaps = 1/188 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-R 59 M + + I+L YGE N I+ ++TR++G+ R + + + + ++ Sbjct: 1 MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGARKSASRLSAVSQPFLYGSFLM 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + + E++ S L Y + E++P L++++ Sbjct: 61 QRTSGLGTLQQGEMILSMRTIREDLFLTAYAAFIAELTDKGTEEKKPNPYLFELILESFK 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + I +++ +L +G +L CV + S + G +C Sbjct: 121 RLNDGTDPDVITFIVQMKMLGVMGLYPELNHCVHCKSGEGTFHFSIRDNGFICHRCFEKD 180 Query: 180 AEKMLVLP 187 ++ + P Sbjct: 181 PYRVPMSP 188 >gi|89094544|ref|ZP_01167482.1| DNA repair protein RecO [Oceanospirillum sp. MED92] gi|89081143|gb|EAR60377.1| DNA repair protein RecO [Oceanospirillum sp. MED92] Length = 229 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 76/237 (32%), Gaps = 16/237 (6%) Query: 1 MYWQDD--AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRV 56 M D +L R Y + +++++ T ++G+ V+ + +++ +Q V++ Sbjct: 1 MAVTDQQAGYVLHGRPYRDTSLLVDFFTLEHGKVSAVVQGARRPNSKLRASVQPFVPVQL 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 +WR R + L L GL L R L +P +LY Sbjct: 61 SWRGRNDLKTVTQAEP---AAAMLFLKGDALLCGLYLNELLERLLLPFDPHPKLYVYYQY 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 LN + E LL +G +LT + + G ++ + Sbjct: 118 ALNELVAGDDVEGALRTFEHRLLDELGHLPELTG----KDQNRIYRIDMDEGFSIIEQIN 173 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + +K A + L + + H + H RE F Sbjct: 174 EADKRRYFYGWQLSAIAADDYTDVQVKRAAKR----LMRLLIDHILGHKPLRSRELF 226 >gi|167570685|ref|ZP_02363559.1| DNA repair protein RecO [Burkholderia oklahomensis C6786] Length = 248 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 75/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E +++++V+TR +GR + + + +LQ + ++W + Sbjct: 19 PAFVLHSHPYRETSLVIDVLTRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLSWSGKSE 78 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L+ L G L +F +P L+ + L Sbjct: 79 LRT---LTGAEWVGGMLPLAGDALLCGFYVNELLVKFCAREDPHPPLFTHYLVTLTRLAH 135 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-K 182 ++ E +LL+ G+ + L + V + V + + Sbjct: 136 GEPPVQVLRSFERVLLRETGYAMSLKRTVARRSVEPDRLYVFDPERGVRDADDDIPSHWP 195 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 ++ + L EE + + L ++ L + L R+ + Sbjct: 196 VIAGQTLLDMEEDDYHRAQTVAQSKT----LMRFLLNTYLGGTPLATRQILIDL 245 >gi|167563524|ref|ZP_02356440.1| DNA repair protein RecO [Burkholderia oklahomensis EO147] Length = 251 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 75/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E +++++V+TR +GR + + + +LQ + ++W + Sbjct: 22 PAFVLHSHPYRETSLVIDVLTRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLSWSGKSE 81 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L+ L G L +F +P L+ + L Sbjct: 82 LRT---LTGAEWVGGMLPLAGDALLCGFYVNELLVKFCAREDPHPPLFTHYLVTLTRLAH 138 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-K 182 ++ E +LL+ G+ + L + V + V + + Sbjct: 139 GEPPVQVLRSFERVLLRETGYAMSLKRTVARRSVEPDRLYVFDPERGVRDADDDIPSHWP 198 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 ++ + L EE + + L ++ L + L R+ + Sbjct: 199 VIAGQTLLDMEEDDYHRAQTVAQSKT----LMRFLLNTYLGGTPLATRQILIDL 248 >gi|284044557|ref|YP_003394897.1| DNA repair protein RecO [Conexibacter woesei DSM 14684] gi|283948778|gb|ADB51522.1| DNA repair protein RecO [Conexibacter woesei DSM 14684] Length = 248 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 65/193 (33%), Gaps = 4/193 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR 61 + +AI+L +GE + IL + T +GR + + R + L+ +RVN Sbjct: 7 RTEAIVLRSIRFGEADRILHLYTPDHGRVGAIAKGARKTRSRFGARLEPFFHLRVNLHLS 66 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + ++ H + ++ + R +P ++ +L L Sbjct: 67 RGDLHTVTSADTIDPHGPLRERACSLDAASRACDAVTRLFETDDPSPAVFHLLANELRLL 126 Query: 122 KIPSVI--GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + L LL GF L C G + L S +GG VC + Sbjct: 127 DGDERHSGQAAQLAFRLKLLVAGGFTPQLASCASCGESDHLSGFSGSAGGVVCSACEASA 186 Query: 180 AEKMLVLPSFLWK 192 +FL + Sbjct: 187 FPLSEEAYTFLVE 199 >gi|78065720|ref|YP_368489.1| DNA repair protein RecO [Burkholderia sp. 383] gi|119361450|sp|Q39I71|RECO_BURS3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|77966465|gb|ABB07845.1| DNA replication and repair protein RecO [Burkholderia sp. 383] Length = 278 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 76/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V+TR +GR + + + +LQ + ++W + Sbjct: 49 PAYVLHSYPYRETSLIIDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKSE 108 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L L G + L +F +P L++ + L Sbjct: 109 VRT---LTGAEWVGGMLPLGGDGLLCGFYANELLVKFCAREDPQPPLFNHYVLTLTRLAH 165 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-K 182 ++ E +LL+ G+ + L + V + V + + Sbjct: 166 GEPAVQVLRSFERVLLRETGYAMALNRTVARRAVEPDRRYVFDPERGVRNADDEVPSHWP 225 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 ++ + L E+ + + L ++ L + L R+ + Sbjct: 226 VISGQTLLDMEQDDYHRAQTVAQSKT----LMRFLLNTYLGGTPLATRQILIDL 275 >gi|171322521|ref|ZP_02911314.1| DNA repair protein RecO [Burkholderia ambifaria MEX-5] gi|171092148|gb|EDT37556.1| DNA repair protein RecO [Burkholderia ambifaria MEX-5] Length = 279 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 76/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V+TR +GR + + + +LQ + ++W + Sbjct: 50 PAFVLHSYPYRETSLIIDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKSE 109 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L L G + L +F +P L++ + L Sbjct: 110 VRT---LTGAEWVGGMLPLGGDGLLCGFYANELLVKFCAREDPQPPLFNHYVLTLTRLAH 166 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-K 182 ++ E +LL+ G+ + L + V + V + + Sbjct: 167 GEPAVQVLRSFERVLLRETGYAMALNRTVARRAVEPDRRYVFDPERGVRNADDDVPSHWP 226 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 ++ + L E+ + + L ++ L + L R+ + Sbjct: 227 VITGQTLLDMEQDDYHRAQTVAQSKT----LMRFLLNTYLGGTPLATRQILIDL 276 >gi|134295166|ref|YP_001118901.1| DNA repair protein RecO [Burkholderia vietnamiensis G4] gi|134138323|gb|ABO54066.1| DNA replication and repair protein RecO [Burkholderia vietnamiensis G4] Length = 279 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 75/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V+TR +GR + + + +LQ + ++W + Sbjct: 50 PAFVLHSYPYRETSLIIDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKSE 109 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L L G L +F +P L++ + L Sbjct: 110 VRT---LTGAEWVGGMLPLGGDGLLCGFYVNELLVKFCAREDPQPPLFNHYVLTLTRLAH 166 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-K 182 ++ E +LL+ G+ + L + V + V + + Sbjct: 167 GEPAVQVLRSFERVLLRETGYAMALNRTVARRAVEPERRYVFDPERGVRNADDDVPSHWP 226 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 ++ + L E+ + + L ++ L + L R+ + Sbjct: 227 VVTGQTLLDMEQDDYHRAQTVAQSKT----LMRFLLNTYLGGTPLATRQILIDL 276 >gi|300114890|ref|YP_003761465.1| DNA repair protein RecO [Nitrosococcus watsonii C-113] gi|299540827|gb|ADJ29144.1| DNA repair protein RecO [Nitrosococcus watsonii C-113] Length = 258 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 76/235 (32%), Gaps = 13/235 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI--LQAGNLVRVNWRSRLA 63 A IL R Y E ++++E T +YGR + + R + LQ + ++W R Sbjct: 7 PAYILHSRPYRETSVLVEAFTPEYGRVGLVAKGVKRRRSHGVSPLQPFCPLLLSWTGRGD 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + A L+ + L R LP R+P +L+ L + Sbjct: 67 LVT---LTGAEATGPAFTLTGEGLICAFYLNELLLRLLPRRDPLEDLFSAYAHSLPSLRH 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGA-VCRSVGLPYAE 181 + E LL +G+GL L V + + W S + V Sbjct: 124 ARQRQQTLRLFERDLLACLGYGLILDHEVNSSRPIEAEQWYSYQLEKGPVRLPSNGLEGM 183 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 K+ + D SL A + L ++ L ++ R Sbjct: 184 KISGHTLQALAQGALADPVSLGEAKR-----LLRWLLAVHLGDKPLKSRGLLEEL 233 >gi|253999487|ref|YP_003051550.1| DNA repair protein RecO [Methylovorus sp. SIP3-4] gi|253986166|gb|ACT51023.1| DNA repair protein RecO [Methylovorus sp. SIP3-4] Length = 241 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 76/234 (32%), Gaps = 14/234 (5%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++++E+ +R +GR + + R + +LQ+ + W + Sbjct: 13 YVLHTYPFKETSLVVELFSRDFGRVAAVAKGARRPRSAMRGMLQSFQPLLATWSGKAELK 72 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + LL + G L R LP + L+ L + Sbjct: 73 TLH---SLEWGSGLLLLQGDALMCGFYMNELLLRLLPREDSHDALFAYYGDTLRTLSQSA 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV-GLPYAEKML 184 + EL +L+ +G+ + L + + C LP A ++ Sbjct: 130 EHATSLRRFELRMLQEMGYAVPLLNDERDQPVEAERIYEYVAERGACTGATALPAANRVQ 189 Query: 185 VLPSFLWK--EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 + L + D+ + + + Q L + L H + R+ + Sbjct: 190 LRGKTLLDMARDDYADSQTQQQSKQ-----LMRMLLAHYLGDKPLHTRQLLIDL 238 >gi|117924217|ref|YP_864834.1| DNA replication and repair protein RecO [Magnetococcus sp. MC-1] gi|117607973|gb|ABK43428.1| DNA replication and repair protein RecO [Magnetococcus sp. MC-1] Length = 242 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 82/233 (35%), Gaps = 12/233 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM---QPILQAGNLVRVNWRSR- 61 AIIL + + ++++ + T+ +G R + + L + + V R Sbjct: 8 PAIILRRIPFRDSSLVVSLFTQDHGVRAVMARGARKGSKTLPRGDLAGYHTLGVQLGGRE 67 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 L E+L+ L + ++R LP + +L+ L L+ Sbjct: 68 GQNMLTLRSAEILQPRHGLLHQRVGSSAAQLMLEQVYRLLPVEDANPKLFGALQEALDRL 127 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 + ++ + LL N+GFG + C G DL + S K VC G P+ Sbjct: 128 EAGEAALEVVGLWQGFLLHNLGFGWQVAHCAGCGGETDLRFFSTKRNQTVCAPCGTPHRH 187 Query: 182 KMLVLPSFLW-----KEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLR 229 ++L LP + + D L LT L ++ + R Sbjct: 188 RLLPLPEGVLAVMRGQPGGAADQAELVM---LTTALLAQHGEKVLHAQQPFFR 237 >gi|288555747|ref|YP_003427682.1| DNA repair protein RecO [Bacillus pseudofirmus OF4] gi|288546907|gb|ADC50790.1| DNA repair protein RecO [Bacillus pseudofirmus OF4] Length = 251 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 69/188 (36%), Gaps = 2/188 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-R 59 M + +AI++ YGE N I+ + TR+ G+ R + + + + + + Sbjct: 1 MQ-KVEAIVIRTNDYGESNKIVTLFTRESGKVGVMARGAKKPKSRLAAISQLFIHGLYLF 59 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + E++ S+ L Y + + + E++P L+ +L L Sbjct: 60 QKSNGLGTLNQAEMIHSYKEVRNDLFLASYATYVVELIDKLTEEKQPNEPLFHLLQQTLL 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + E+ +++ G +L +C G T+ S K G +C+ Sbjct: 120 YLDEGIDPEVLLRIFEMKMMQVAGITPELDQCTNCGSTEVPSGFSIKEAGFLCKKCIHKD 179 Query: 180 AEKMLVLP 187 + P Sbjct: 180 EHAFKITP 187 >gi|161525338|ref|YP_001580350.1| DNA repair protein RecO [Burkholderia multivorans ATCC 17616] gi|189349925|ref|YP_001945553.1| DNA repair protein RecO [Burkholderia multivorans ATCC 17616] gi|221201353|ref|ZP_03574392.1| DNA repair protein RecO [Burkholderia multivorans CGD2M] gi|221208833|ref|ZP_03581831.1| DNA repair protein RecO [Burkholderia multivorans CGD2] gi|160342767|gb|ABX15853.1| DNA repair protein RecO [Burkholderia multivorans ATCC 17616] gi|189333947|dbj|BAG43017.1| DNA repair protein [Burkholderia multivorans ATCC 17616] gi|221171289|gb|EEE03738.1| DNA repair protein RecO [Burkholderia multivorans CGD2] gi|221178621|gb|EEE11029.1| DNA repair protein RecO [Burkholderia multivorans CGD2M] Length = 278 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 33/234 (14%), Positives = 75/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V+TR +GR + + + +LQ + ++W + Sbjct: 49 PAFVLHSYPYRETSLIVDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKSE 108 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L+ L G + L +F +P L++ + L Sbjct: 109 VRT---LTGAEWVGGMLPLAGDALLCGFYANELLVKFCAREDPQPPLFNHYVLTLTRLAH 165 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-- 181 ++ E +LL+ G+ + L + V + V + + Sbjct: 166 GEPAVQVLRSFERVLLRETGYAMALNRTVARRAVEPDQRYVFDPERGVRPAGDDVPSHWP 225 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 + +++ ++ + L + LN Y R+ + Sbjct: 226 VVSGQTLLDMEQDDYHRPQTVTQSKTLMRFLLNTYL----GGTPLATRQILIDL 275 >gi|221214086|ref|ZP_03587059.1| DNA repair protein RecO [Burkholderia multivorans CGD1] gi|221166263|gb|EED98736.1| DNA repair protein RecO [Burkholderia multivorans CGD1] Length = 275 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 33/234 (14%), Positives = 75/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V+TR +GR + + + +LQ + ++W + Sbjct: 46 PAFVLHSYPYRETSLIVDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKSE 105 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L+ L G + L +F +P L++ + L Sbjct: 106 VRT---LTGAEWVGGMLPLAGDALLCGFYANELLVKFCAREDPQPPLFNHYVLTLTRLAH 162 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-- 181 ++ E +LL+ G+ + L + V + V + + Sbjct: 163 GEPAVQVLRSFERVLLRETGYAMALNRTVARRAVEPDQRYVFDPERGVRPADDDVPSHWP 222 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 + +++ ++ + L + LN Y R+ + Sbjct: 223 IVSGQTLLDMEQDDYHRPQTVTQSKTLMRFLLNTYL----GGTPLATRQILIDL 272 >gi|170699585|ref|ZP_02890625.1| DNA repair protein RecO [Burkholderia ambifaria IOP40-10] gi|170135536|gb|EDT03824.1| DNA repair protein RecO [Burkholderia ambifaria IOP40-10] Length = 279 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 75/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V+TR +GR + + + +LQ + ++W + Sbjct: 50 PAFVLHSYPYRETSLIIDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKSE 109 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L L G L +F +P L++ + L Sbjct: 110 VRT---LTGAEWVGGMLPLGGDGLLCGFYVNELLVKFCAREDPQPPLFNHYVLTLTRLAH 166 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-K 182 ++ E +LL+ G+ + L + V + V + + Sbjct: 167 GEPAVQVLRSFERVLLRETGYAMALNRTVARRAVEPDRRYVFDPERGVRNADDDVPSHWP 226 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 ++ + L E+ + + L ++ L + L R+ + Sbjct: 227 VITGQTLLDMEQDDYHRAQTVAQSKT----LMRFLLNTYLGGTPLATRQILIDL 276 >gi|115351066|ref|YP_772905.1| DNA repair protein RecO [Burkholderia ambifaria AMMD] gi|172060071|ref|YP_001807723.1| DNA repair protein RecO [Burkholderia ambifaria MC40-6] gi|115281054|gb|ABI86571.1| DNA replication and repair protein RecO [Burkholderia ambifaria AMMD] gi|171992588|gb|ACB63507.1| DNA repair protein RecO [Burkholderia ambifaria MC40-6] Length = 279 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 75/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V+TR +GR + + + +LQ + ++W + Sbjct: 50 PAFVLHSYPYRETSLIIDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKSE 109 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L L G L +F +P L++ + L Sbjct: 110 VRT---LTGAEWVGGMLPLGGDGLLCGFYVNELLVKFCAREDPQPPLFNHYVLTLTRLAH 166 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-K 182 ++ E +LL+ G+ + L + V + V + + Sbjct: 167 GEPAVQVLRSFERVLLRETGYAMALNRTVARRAVEPDRRYVFDPERGVRNADDDVPSHWP 226 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 ++ + L E+ + + L ++ L + L R+ + Sbjct: 227 VITGQTLLDMEQDDYHRAQTVAQSKT----LMRFLLNTYLGGTPLATRQILIDL 276 >gi|170695424|ref|ZP_02886569.1| DNA repair protein RecO [Burkholderia graminis C4D1M] gi|170139615|gb|EDT07798.1| DNA repair protein RecO [Burkholderia graminis C4D1M] Length = 307 Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 33/234 (14%), Positives = 76/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V++R +GR + + + +LQ + ++W + Sbjct: 78 PAFVLHSYPYRETSLIIDVLSRDHGRLALVAKGAKRPHSALRGVLQTFQPLALSWSGKSE 137 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L+ L G L +F +P +L+ + + Sbjct: 138 VRT---LTGAEWVGGMLPLTGDALLCGFYVNELLVKFCAREDPHPQLFHHYVVTMTRLAH 194 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-K 182 ++ E +LL+ G+ + L + V V + A+ Sbjct: 195 DEPPVQVLRSFERVLLRETGYAMSLDRTVTRKAVDAGKRYVFDPERGVREASDDLPAQWP 254 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 ++ + L E+ + + L ++ L + L R+ + Sbjct: 255 VVAGQTLLDMEQDDYHRAQTVAQSKT----LMRFLLNTYLGGTPLATRQILIDL 304 >gi|307730525|ref|YP_003907749.1| DNA repair protein RecO [Burkholderia sp. CCGE1003] gi|307585060|gb|ADN58458.1| DNA repair protein RecO [Burkholderia sp. CCGE1003] Length = 306 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 33/234 (14%), Positives = 76/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V++R +GR + + + +LQ + ++W + Sbjct: 77 PAFVLHSYPYRETSLIIDVLSRDHGRLALVAKGAKRPHSALRGVLQTFQPLALSWSGKSE 136 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L+ L G L +F +P +L+ + + Sbjct: 137 VRT---LTGAEWVGGMLPLTGDALLCGFYVNELLVKFCAREDPHPQLFHHYVVTMTRLAH 193 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-- 181 ++ E +LL+ G+ + L + V + V + A+ Sbjct: 194 DEPPVQVLRSFERVLLRETGYAMSLDRTVTRKAVEAGSRYVFDPERGVREASDDLPAQWP 253 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 + +++ A ++ + L + LN Y R+ + Sbjct: 254 VVAGQTLLDMEKDDYHRAQTVAQSKTLMRFLLNTYL----GGTPLATRQILIDL 303 >gi|330860317|emb|CBX70631.1| DNA repair protein recO [Yersinia enterocolitica W22703] Length = 231 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 70/218 (32%), Gaps = 8/218 (3%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R Y E +++L++ T GR + + R + LQ + V Sbjct: 1 MEGWQ-RAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCLQPFTPLLVR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 R A L+ S+ GL L R L + L+ Sbjct: 60 CTGRGEVKTLRSAEP---VSLALPLAGSMLYSGLYVNELLSRVLEHQTNYSALFFDYLHC 116 Query: 118 LNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L Q EL +L ++G+G+D C +G + Sbjct: 117 LQSLAGSDGSPEYALRQFELAILAHLGYGVDFLHCAGSGQPVSDTMTYRYREEKGFIASL 176 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLN 214 + + DAD+L++A + T L Sbjct: 177 VVDHYSFTGRQLLALANREFPDADTLRAAKRFTRIALK 214 >gi|323526857|ref|YP_004229010.1| DNA repair protein RecO [Burkholderia sp. CCGE1001] gi|323383859|gb|ADX55950.1| DNA repair protein RecO [Burkholderia sp. CCGE1001] Length = 306 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 77/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V++R +GR + + + +LQ + ++W + Sbjct: 77 PAFVLHSYPYRETSLIIDVLSRDHGRLALVAKGAKRPHSALRGVLQTFQPLALSWSGKSE 136 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L+ L G L +F +P +L+ + + Sbjct: 137 VRT---LTGAEWVGGMLPLTGDALLCGFYVNELLVKFCAREDPHPQLFHHYVVTMTRLAH 193 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-- 181 ++ E +LL+ G+ + L + V + V + G A+ Sbjct: 194 DEPPVQVLRSFERVLLRETGYAMSLDRTVARRAVEAGGRYVFDPERGVREASGDLPAQWP 253 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 + +++ A ++ + L + LN Y R+ + Sbjct: 254 VVAGQTLLDMEKDDYHRAQTVAQSKTLMRFLLNTYL----GGTPLATRQILIDL 303 >gi|113868515|ref|YP_727004.1| DNA repair protein RecO [Ralstonia eutropha H16] gi|113527291|emb|CAJ93636.1| combinational DNA repair protein (RecF pathway) [Ralstonia eutropha H16] Length = 297 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 30/148 (20%), Positives = 49/148 (33%), Gaps = 5/148 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L Y E ++IL++ TR YGR + + + +LQ + V V+W R Sbjct: 67 PGFVLHAWPYRETSLILDLFTRDYGRISMVAKGAKRPHSALRAVLQHFHPVSVSWSGRGE 126 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + L L RF P + L+ L Sbjct: 127 VKTLTKAE-WVGGMPPLAGD--ALLSAFYLNELLMRFCPREDAHPALFRHYLTTLTRLAH 183 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKC 151 G + E +LL+ GF + +C Sbjct: 184 GEQAGLVLRSFERVLLQETGFAVAFDQC 211 >gi|229916326|ref|YP_002884972.1| DNA repair protein RecO [Exiguobacterium sp. AT1b] gi|259563678|sp|C4L405|RECO_EXISA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|229467755|gb|ACQ69527.1| DNA repair protein RecO [Exiguobacterium sp. AT1b] Length = 249 Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 68/173 (39%), Gaps = 1/173 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + I++ +YGE N ++ + T + G+ R + + + V + Sbjct: 1 MLQKVTGIVVRTVNYGESNKVVTLFTEELGKVAIMARGAKKPGSRFHASSQPFVEGVYIF 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 ++ L + + + + ++ + Y + + + R + +R L+ +L L Sbjct: 61 PSSRGLAQLKSSDVMTSYPEIRKDVERMAYAMYWLELVDRSVEDRVQNRPLFRILQDALQ 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 I +EL +L +G LT CV G D ++ S SGG +C Sbjct: 121 ALNAGMDADVITHYVELRILHLLGVAPVLTGCVRCGDVTDPMYFSVASGGFLC 173 >gi|292492474|ref|YP_003527913.1| DNA repair protein RecO [Nitrosococcus halophilus Nc4] gi|291581069|gb|ADE15526.1| DNA repair protein RecO [Nitrosococcus halophilus Nc4] Length = 249 Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 74/235 (31%), Gaps = 13/235 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLA 63 A +L +R Y E + ++E+ T+ YGR + + R + +LQ + ++W R Sbjct: 7 PAYVLHLRPYRETSALVEIFTQDYGRVGLVAKGVRQRRSKAIGLLQPFCPLLLSWVGRSD 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + L+ + L R LP R+P L+ + L Sbjct: 67 LVT---LTGAEAAGRGPALTGEGLVCAFYLNELLLRLLPRRDPFEALFSVYAHSLPPLAN 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRSVGLPYAE- 181 + E LL +G+GL LT T W S + R Sbjct: 124 SQQRQQALRLFERDLLTYLGYGLTLTHEADTHRPIDAEQWYSYQLEKGPQRFQSEDLGGM 183 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 K+ + D SL A Q L ++ L + R Sbjct: 184 KVRGRTLQALARGELADPVSLHEAKQ-----LLRWLLAFQLGDKPLKSRALLEEL 233 >gi|167586635|ref|ZP_02379023.1| DNA repair protein RecO [Burkholderia ubonensis Bu] Length = 255 Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 77/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V+TR +GR + + + +LQ + ++W + Sbjct: 26 PAFVLHSYPYRETSLIIDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKSE 85 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L+ L G + L +F +P L++ + L Sbjct: 86 ---MRTLTGAEWVGGMLPLAGDALLCGFYANELLVKFCAREDPQPPLFNHYVVTLTRLAH 142 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-K 182 ++ E +LL+ G+ + L + V + V + + Sbjct: 143 GEPAVQVLRSFERVLLRETGYAMALNRTVARRAVEADRLYVFDPERGVRGADDDVPSHWP 202 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 ++ + L E+ + + L ++ L + L R+ + Sbjct: 203 VVSGQTLLDMEQDDYHRAQTVAQSKT----LMRFLLNTYLGGTPLATRQILIDL 252 >gi|313201512|ref|YP_004040170.1| DNA repair protein reco [Methylovorus sp. MP688] gi|312440828|gb|ADQ84934.1| DNA repair protein RecO [Methylovorus sp. MP688] Length = 230 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 76/234 (32%), Gaps = 14/234 (5%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++++E+ +R +GR + + R + +LQ+ + W + Sbjct: 2 YVLHTYPFKETSLVVELFSRDFGRVAAVAKGARRPRSAMRGMLQSFQPLLATWSGKAELK 61 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + LL + G L R LP + L+ L + Sbjct: 62 TLH---SLEWGSGLLLLQGDALMCGFYMNELLLRLLPREDSHDALFAYYGDTLRTLSQSA 118 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG-LPYAEKML 184 + EL +L+ +G+ + L + + C LP A ++ Sbjct: 119 EHATSLRRFELRMLQEMGYAVPLLNDERDQPIEAERVYEYVAERGACTGATPLPAANRVQ 178 Query: 185 VLPSFLWK--EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 + L + D+ + + + Q L + L H + R+ + Sbjct: 179 LRGKTLLDMARDDYADSQTQQQSKQ-----LMRMLLAHYLGDKPLHTRQLLIDL 227 >gi|119774019|ref|YP_926759.1| DNA repair protein RecO [Shewanella amazonensis SB2B] gi|119766519|gb|ABL99089.1| DNA repair protein RecO [Shewanella amazonensis SB2B] Length = 224 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 68/233 (29%), Gaps = 15/233 (6%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWRSRLA 63 + +L R Y E + I+ ++ GR R + +LQ + + + Sbjct: 2 ERGYLLHSRPYRENSAIVNLLVDGAGRVDAIARLGSGKRSSRALLQPFQPLLFSLSGKGE 61 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 A L + L R L L+ + L Sbjct: 62 LRTLIQPEAYA---PAIPLQGDALYAAMYLNELLMRCLSHSHAGEGLFFSYHQTLMSMAK 118 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 ++ EL LL+ +G L+ + P G + EK Sbjct: 119 GFCQSQLR-YFELSLLEELGACPSLSDDTLGTAISAECAYRPCPEGGL----APSTLEKA 173 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHL-LRENFLGK 235 + + L E+ + +A Q L ++ L + + L R+ F + Sbjct: 174 ISGRAILALAEKNLSEADFAAARQ-----LLRFLLAPFVGNKPLVSRQLFANR 221 >gi|73541937|ref|YP_296457.1| DNA repair protein RecO [Ralstonia eutropha JMP134] gi|119361473|sp|Q46Z20|RECO_RALEJ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|72119350|gb|AAZ61613.1| DNA replication and repair protein RecO [Ralstonia eutropha JMP134] Length = 291 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 50/148 (33%), Gaps = 5/148 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L Y E ++IL+V TR +GR + + +P+LQ + + ++W R Sbjct: 61 PGFVLHAWPYRETSLILDVFTRDHGRLSMVAKGAKRPHSALRPVLQHFHPISLSWSGRGE 120 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + L L RF P + L+ L Sbjct: 121 VKTLTRAE-WVGGMPPLAGD--ALLSAFYLNELLMRFCPREDGHPALFRHYMATLTRLAH 177 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKC 151 G + E +LL+ GF + +C Sbjct: 178 GEAAGLVLRSFERVLLQETGFAVAFDQC 205 >gi|332975859|gb|EGK12737.1| recombination protein O [Desmospora sp. 8437] Length = 250 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 84/252 (33%), Gaps = 21/252 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-R 59 M + + +++ R YGE + ++ + T+ +G++ R + + + + Sbjct: 1 MLEKLEGVVIRTRDYGESHKVVILFTKAHGKYAVMARGAKKPKSRLAAVTQPFTSGEYLC 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + ++LES Y L + E+EP L +Y L LN Sbjct: 61 FTGSGMATLSQGDILESRHLLRSDLVRASYAAYWTELLDKLKEEKEPDLPVYIWLETVLN 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + EL +L++ G+ L CV G + S + GG +C Sbjct: 121 LLEEGVDPEILSRIFELKVLESAGYRPRLQGCVQCGGADTPVKFSIRQGGFLCSGC---- 176 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAF---QL--------TDYFLNKYA--LQHNIIHCH 226 P L+ + + +L T L + I Sbjct: 177 ---SHRDPEALFLSPAAARILGILAGISPQRLGQIRVKEETRRQLERILRSFIDEYIDLP 233 Query: 227 LLRENFLGKLLE 238 L +FL ++ + Sbjct: 234 LRSRDFLDRMKK 245 >gi|297516304|ref|ZP_06934690.1| DNA repair protein RecO [Escherichia coli OP50] Length = 161 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 60/163 (36%), Gaps = 8/163 (4%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN 57 M WQ A +L R + E +++L+V T + GR + +S R + LQ + + Sbjct: 1 MEGWQ-RAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLR 59 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R A LS GL L R L EL+ Sbjct: 60 FGGRGEVKTLR---SAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHC 116 Query: 118 LNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 + + + EL LL ++G+G++ T C +G D Sbjct: 117 IQSLAGVTGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVD 159 >gi|116872891|ref|YP_849672.1| DNA repair protein RecO [Listeria welshimeri serovar 6b str. SLCC5334] gi|123461072|sp|A0AIR1|RECO_LISW6 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|116741769|emb|CAK20893.1| recombination protein O [Listeria welshimeri serovar 6b str. SLCC5334] Length = 255 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 81/250 (32%), Gaps = 20/250 (8%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I++ SY E + I+ + TR++G+ R + + + + Sbjct: 5 EGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSRLAAVTQLFTNGYFTFFGGNG 64 Query: 66 LGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 LG + EV+E+ + + Y L + ER+P LY++ L Sbjct: 65 LGTLQQGEVIENFSSIQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQILRDIDEG 124 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 + E+ +L +G + KC + G T S +S G +C +M Sbjct: 125 YDPQILTQIYEMKMLPVLGLYPTMDKCAICGETTGHFDFSTRSNGIICHRCFEKDRYRMH 184 Query: 185 VLPS-------FLWKEEQTIDADSLKSAFQLTDYFLNKYA---LQHNIIHCHLLRENF-- 232 + + F + + +K T +L K N R+ Sbjct: 185 LPENVVKLLRLFFIFQLDRLGNIDVKQE---TKDWLQKAIDTYYDENSGLYLKSRKFLRD 241 Query: 233 ----LGKLLE 238 L + Sbjct: 242 MDKWENMLKK 251 >gi|89100472|ref|ZP_01173334.1| DNA repair protein RecO [Bacillus sp. NRRL B-14911] gi|89084815|gb|EAR63954.1| DNA repair protein RecO [Bacillus sp. NRRL B-14911] Length = 253 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 73/191 (38%), Gaps = 1/191 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-R 59 M+ + + I+L +YGE N I+ + TR++G+ R + + + Sbjct: 1 MFEKCEGIVLRTVNYGESNKIVTLYTREWGKVGVMARGAKKPNSRLSAVTQPFTYGYFLV 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + + E++ S + L Y + + + E++P +++L+ LN Sbjct: 61 QRSSGLGLMQQGEMVSSMRSIREDIFLTAYASYIVDLTDKTVEEKKPNPFHFELLHQTLN 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + E+ +L ++G L KC V G T S + GG +C Sbjct: 121 YMNEGYDPEIMVNIYEMKMLNSLGLYPVLDKCSVCGSTDGHFSFSIREGGLICHRCLEKD 180 Query: 180 AEKMLVLPSFL 190 + P+ L Sbjct: 181 PYHYKISPAAL 191 >gi|330815988|ref|YP_004359693.1| DNA repair protein RecO [Burkholderia gladioli BSR3] gi|327368381|gb|AEA59737.1| DNA repair protein RecO [Burkholderia gladioli BSR3] Length = 295 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 70/234 (29%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L Y E ++I++V+TR +GR + + + +LQ + ++W + Sbjct: 66 PGFVLHSYPYRETSLIIDVLTRDHGRVALVAKGAKRPHSALRGVLQTFQPLSLSWSGKSE 125 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L L G L +F +P L+ + L Sbjct: 126 ---MRTLTGAEWVGGMLPLGGDALLCGFYVNELLVKFCAREDPFPPLFQHYLVTLARLAH 182 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-- 181 ++ E +LL+ G+ L + Q V + A Sbjct: 183 DEPAVQVLRSFERVLLRETGYARALNRTTARRSVQPEGRYVFDPERGVREASDELPAHWP 242 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 + +E+ A ++ + L + LN Y R+ + Sbjct: 243 VVAGQTLLDMEEDDYHRAQTVAQSKTLMRFLLNTYL----GGTPLATRQILIDL 292 >gi|313633230|gb|EFS00100.1| DNA repair protein RecO [Listeria seeligeri FSL N1-067] Length = 255 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 68/186 (36%), Gaps = 1/186 (0%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I++ SY E + I+ + TR++G+ R + + + + Sbjct: 5 EGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSRLAAVTQLFTSGYFTFFGGNG 64 Query: 66 LGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 LG + EV+E+ + + Y L + ER+P LY++ L Sbjct: 65 LGTLQQGEVIENFPSIQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQILRDIDEG 124 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 + E+ +L +G + KC + G T S +S G +C +M Sbjct: 125 YDPQILTQIFEMKMLPVLGHYPTMDKCAICGETTGHFDFSTRSNGIICHRCFDKDRYRMH 184 Query: 185 VLPSFL 190 + + + Sbjct: 185 LPENVV 190 >gi|308174316|ref|YP_003921021.1| DNA double strand break repair and homologous recombination factor [Bacillus amyloliquefaciens DSM 7] gi|307607180|emb|CBI43551.1| DNA double strand break repair and homologous recombination factor [Bacillus amyloliquefaciens DSM 7] Length = 255 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 64/179 (35%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-R 59 M + + I+L YGE N I+ ++TR++G+ R + + + + ++ Sbjct: 1 MLTKCEGIVLRTNDYGEMNKIVTLLTREHGKIGVMARGARKSASRLSAVSQPFLYGSFLM 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + + E++ S L Y + E++P L++++ Sbjct: 61 QRTSGLGTLQQGEMILSMRTIREDLFLTAYAAFIAELTDKGTEEKKPNPYLFELILESFK 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + I +++ +L +G +L CV S + G +C Sbjct: 121 RLNEGTDPDVITFIVQMKMLGVMGLYPELNHCVHCKSRDGTFHFSVRDNGFICHRCFGK 179 >gi|209517220|ref|ZP_03266065.1| DNA repair protein RecO [Burkholderia sp. H160] gi|209502356|gb|EEA02367.1| DNA repair protein RecO [Burkholderia sp. H160] Length = 301 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 34/236 (14%), Positives = 75/236 (31%), Gaps = 15/236 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V++R +GR + + + +LQ + + W + Sbjct: 72 PAFVLHSYPYRETSLIIDVLSRDHGRLALVAKGAKRPHSALRGVLQTFQPLSLAWSGKSE 131 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L+ L G L RF +P +L+ + L Sbjct: 132 ---MRTLTGAEWVGGMLPLTGDALLCGFYVNELLVRFCAREDPHPQLFHHYVVTLTRLAH 188 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK- 182 ++ E +LL+ G+ + L + V V R + + Sbjct: 189 DEPPVQVLRSFERVLLRETGYAMALDRTVARKAVLADGRYVFDPERGV-REASDEWPAQW 247 Query: 183 --MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 + +++ A ++ + L ++ L + L R+ + Sbjct: 248 PVVSGQTLLDMEKDDYHRAQTVAQSKT-----LMRFLLNTYLGGAPLATRQILIDL 298 >gi|289434742|ref|YP_003464614.1| recombination protein O [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170986|emb|CBH27528.1| recombination protein O [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 255 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 68/186 (36%), Gaps = 1/186 (0%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I++ SY E + I+ + TR++G+ R + + + + Sbjct: 5 EGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSRLAAVTQLFTSGYFTFFGGNG 64 Query: 66 LGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 LG + EV+E+ + + Y L + ER+P LY++ L Sbjct: 65 LGTLQQGEVIENFSSIQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQILRDIDEG 124 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 + E+ +L +G + KC + G T S +S G +C +M Sbjct: 125 YDPQILTQIFEMKMLPVLGHYPTMDKCAICGETTGHFDFSTRSNGIICHRCFDKDRYRMH 184 Query: 185 VLPSFL 190 + + + Sbjct: 185 LPENVV 190 >gi|77164312|ref|YP_342837.1| recombination protein O, RecO [Nitrosococcus oceani ATCC 19707] gi|254434720|ref|ZP_05048228.1| DNA repair protein RecO [Nitrosococcus oceani AFC27] gi|92087029|sp|Q3JCY9|RECO_NITOC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|76882626|gb|ABA57307.1| DNA replication and repair protein RecO [Nitrosococcus oceani ATCC 19707] gi|207091053|gb|EDZ68324.1| DNA repair protein RecO [Nitrosococcus oceani AFC27] Length = 246 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 75/235 (31%), Gaps = 13/235 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLA 63 A +L R Y E + ++EV T +YGR + + R +LQ + ++W R Sbjct: 7 PAYVLHSRPYRETSALVEVFTPEYGRVGLVAKGVKRQRTHRFSLLQPFCPLLLSWTGRGD 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + +L+ + L R LP R+P L+ + L Sbjct: 67 LVT---LTGAEAAGPIPVLTGEGLICAFYLNELLLRLLPRRDPLEALFSVYAHSLPSLIH 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRSVGLPYAE- 181 +I E LL +G+GL L T + W S + R + Sbjct: 124 AQQRQQILRLFERDLLAYLGYGLILKYEAGTSRPIEAGQWYSYQLEKGPVRLLSEDLEGM 183 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 K+ D SL A + L ++ L ++ R Sbjct: 184 KVRGHTLQALARGALADPASLGEAKR-----LLRWLLAFHLGDKPLKSRGLLEEL 233 >gi|313637816|gb|EFS03157.1| DNA repair protein RecO [Listeria seeligeri FSL S4-171] Length = 255 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 68/186 (36%), Gaps = 1/186 (0%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I++ SY E + I+ + TR++G+ R + + + + Sbjct: 5 EGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSRLAAVTQLFTSGYFTFFGGNG 64 Query: 66 LGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 LG + EV+E+ + + Y L + ER+P LY++ L Sbjct: 65 LGTLQQGEVIENFSSIQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQILRDIDEG 124 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 + E+ +L +G + KC + G T S +S G +C +M Sbjct: 125 YDPQILTQIFEMKMLPVLGHYPTMDKCAICGETTGHFDFSTRSNGIICHRCFDKDRYRMH 184 Query: 185 VLPSFL 190 + + + Sbjct: 185 LPENVV 190 >gi|145588595|ref|YP_001155192.1| DNA repair protein RecO [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|254764653|sp|A4SVW4|RECO_POLSQ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|145047001|gb|ABP33628.1| DNA replication and repair protein RecO [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 244 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 45/219 (20%), Positives = 79/219 (36%), Gaps = 12/219 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSR 61 + A +L Y E ++IL+V TRQ+GR + + +P+LQ + V+W + Sbjct: 8 DEPAFVLHSIPYKETSLILDVFTRQHGRMALIAKGAKRPHSVLRPVLQRFQPLLVSWSGK 67 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + E + + + L G L +FL + LYD + +N Sbjct: 68 SELRT-LTKSEWVGGMPSLVGD--ALLCGFYLNELLVKFLAREDDYERLYDRYSETINAL 124 Query: 122 KIPSVI----GKIFVQIELMLLKNIGFGLDLTKCVVTGV---TQDLLWVSPKSGGAVCRS 174 +I EL LL+ G+ L +CV T + L P+ G + Sbjct: 125 SNLEFESKGLEEILRPFELSLLQETGYAAALDRCVETNDSPVFEALYVYQPERGVRPIQV 184 Query: 175 VGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFL 213 + + D ++L + QL + L Sbjct: 185 DDPGHWPVLRGKSLLAIAAGDFSDPETLSESKQLMRFLL 223 >gi|254252843|ref|ZP_04946161.1| Recombinational DNA repair protein (RecF pathway) [Burkholderia dolosa AUO158] gi|124895452|gb|EAY69332.1| Recombinational DNA repair protein (RecF pathway) [Burkholderia dolosa AUO158] Length = 278 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 71/216 (32%), Gaps = 7/216 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V+TR +GR + + + +LQ + ++W + Sbjct: 49 PAFVLHSYPYRETSLIIDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKSE 108 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L L G + L +F + L++ + L Sbjct: 109 VRT---LTGAEWVGGMLPLGGDALLCGFYANELLVKFCAREDSQPPLFNHYVLTLTRLAH 165 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-- 181 ++ E +LL+ G+ + L + V + V + + Sbjct: 166 GEPAVQVLRSFERVLLRETGYAMALNRTVARRAVEPDRRYVFDPERGVRNADDDVPSHWP 225 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYA 217 + +++ A ++ + L + LN Y Sbjct: 226 VVSGQTLLDMEQDDYHRAQTVAQSKTLMRFLLNTYL 261 >gi|330502447|ref|YP_004379316.1| DNA repair protein RecO [Pseudomonas mendocina NK-01] gi|328916733|gb|AEB57564.1| DNA repair protein RecO [Pseudomonas mendocina NK-01] Length = 229 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 76/233 (32%), Gaps = 13/233 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A +L R Y E + +++ T GR +R + ++ I + + + R R Sbjct: 5 AYVLHSRPYKESSALVDFFTA-QGRIRAVLRAARG-KVGSIARPFAPLELELRGRGELKT 62 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 + + LL+ GL L R LP +P + + + L Sbjct: 63 ---VGRLESAGIPLLLTGEALFSGLYLNELLIRLLPAEDPHPAMLEHYGLTLQALAAGRP 119 Query: 127 IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVL 186 + + E LL +G+G L + + + V L L Sbjct: 120 LEPLLRAFEWRLLDELGYGFALDRDQHDQAIDPAALYRWQQDIGLVPVVQLQ-PGVFLGR 178 Query: 187 PSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHL-LRENFLGKLLE 238 E +L +A + L + AL ++ L RE F+ L E Sbjct: 179 ELLAMAEADWQTPGALAAAKR-----LMRQALAPHLGGRPLVSRELFM-TLKE 225 >gi|16803500|ref|NP_464985.1| DNA repair protein RecO [Listeria monocytogenes EGD-e] gi|217964394|ref|YP_002350072.1| DNA repair protein RecO [Listeria monocytogenes HCC23] gi|224499690|ref|ZP_03668039.1| DNA repair protein RecO [Listeria monocytogenes Finland 1988] gi|254827748|ref|ZP_05232435.1| DNA repair protein recO [Listeria monocytogenes FSL N3-165] gi|254829781|ref|ZP_05234436.1| DNA repair protein RecO [Listeria monocytogenes 10403S] gi|255030078|ref|ZP_05302029.1| DNA repair protein RecO [Listeria monocytogenes LO28] gi|290894222|ref|ZP_06557191.1| DNA repair protein recO [Listeria monocytogenes FSL J2-071] gi|20139471|sp|Q8Y752|RECO_LISMO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254764641|sp|B8DE51|RECO_LISMH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|16410889|emb|CAC99538.1| lmo1460 [Listeria monocytogenes EGD-e] gi|217333664|gb|ACK39458.1| DNA repair protein RecO [Listeria monocytogenes HCC23] gi|258600127|gb|EEW13452.1| DNA repair protein recO [Listeria monocytogenes FSL N3-165] gi|290556219|gb|EFD89764.1| DNA repair protein recO [Listeria monocytogenes FSL J2-071] gi|307571041|emb|CAR84220.1| DNA repair protein O [Listeria monocytogenes L99] gi|313608757|gb|EFR84575.1| DNA repair protein RecO [Listeria monocytogenes FSL F2-208] Length = 255 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 67/186 (36%), Gaps = 1/186 (0%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I++ SY E + I+ + TR++G+ R + + + + Sbjct: 5 EGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSRLAAVTQLFTNGYFTFFGGNG 64 Query: 66 LGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 LG + EV+E+ + + Y L + ER+P LY++ L Sbjct: 65 LGTLQQGEVIETFSSIQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQILRDIDEG 124 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 + E+ +L +G + KC + G T S S G +C +M Sbjct: 125 YDPQILTQIYEMKMLPVLGLYPTMDKCAICGETTGHFDFSTSSNGIICHRCFEKDRYRMH 184 Query: 185 VLPSFL 190 + + + Sbjct: 185 LPENVV 190 >gi|295677174|ref|YP_003605698.1| DNA repair protein RecO [Burkholderia sp. CCGE1002] gi|295437017|gb|ADG16187.1| DNA repair protein RecO [Burkholderia sp. CCGE1002] Length = 301 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 34/236 (14%), Positives = 75/236 (31%), Gaps = 15/236 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V++R +GR + + + +LQ + + W + Sbjct: 72 PAFVLHSYPYRETSLIIDVLSRDHGRLALVAKGAKRPHSALRGVLQTFQPLSLAWSGKSE 131 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L+ L G L RF +P +L+ + L Sbjct: 132 ---MRTLTGAEWVGGMLPLTGDALLCGFYVNELLVRFCAREDPHPQLFHHYVVTLTRLAH 188 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK- 182 ++ E +LL+ G+ + L + V V R + + Sbjct: 189 DEPPVQVLRSFERVLLRETGYAMALDRTVARKAVLADGRYVFDPERGV-REASDEWPAQW 247 Query: 183 --MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 + +++ A ++ + L ++ L + L R+ + Sbjct: 248 PVVAGQTLLDMEKDDYHRAQTVAQSKT-----LMRFLLNTYLGGAPLATRQILIDL 298 >gi|329912352|ref|ZP_08275733.1| DNA recombination and repair protein RecO [Oxalobacteraceae bacterium IMCC9480] gi|327545639|gb|EGF30797.1| DNA recombination and repair protein RecO [Oxalobacteraceae bacterium IMCC9480] Length = 264 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 71/234 (30%), Gaps = 12/234 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L + E ++I++V TR++GR + + + +LQ + ++W + Sbjct: 36 PGFVLHSYPHKETSLIIDVFTREHGRIALVAKGAKRPHSALRGVLQTFQPLSLSWTGKSE 95 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L S L G L + + +P L+D LN Sbjct: 96 ---IRTLTAAEWVGGLLPLEKSALLCGFYLNELLVKLIARDDPHPGLFDHYVSALNQLAH 152 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCV-VTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + + EL L+K G DL+ C V + + Sbjct: 153 GEAATIVLRKFELSLMKQTGVAADLSLCSGTREPVVPTSSYVVDPERGVRLARPSDIWPR 212 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 + + E + FL ++ L H + L R+ + Sbjct: 213 VSGQTLLDMEREDYAGTTTQSQ-----SKFLMRFLLAHQLGGVPLNTRQILIDL 261 >gi|284801847|ref|YP_003413712.1| DNA repair protein RecO [Listeria monocytogenes 08-5578] gi|284994989|ref|YP_003416757.1| DNA repair protein RecO [Listeria monocytogenes 08-5923] gi|284057409|gb|ADB68350.1| DNA repair protein RecO [Listeria monocytogenes 08-5578] gi|284060456|gb|ADB71395.1| DNA repair protein RecO [Listeria monocytogenes 08-5923] Length = 255 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 68/186 (36%), Gaps = 1/186 (0%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I++ SY E + I+ + TR++G+ R + + + + + Sbjct: 5 EGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSRLAAVTQLFTNGYFTFFGSNG 64 Query: 66 LGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 LG + EV+E+ + + Y L + ER+P LY++ L Sbjct: 65 LGTLQQGEVIENFSSIQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQILRDIDEG 124 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 + E+ +L +G + KC + G T S S G +C +M Sbjct: 125 YDPQILTQIYEMKMLPVLGLYPTMDKCAICGETTGHFDFSTSSNGIICHRCFEKDRYRMH 184 Query: 185 VLPSFL 190 + + + Sbjct: 185 LPENVV 190 >gi|296158232|ref|ZP_06841064.1| DNA repair protein RecO [Burkholderia sp. Ch1-1] gi|295891568|gb|EFG71354.1| DNA repair protein RecO [Burkholderia sp. Ch1-1] Length = 306 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 33/234 (14%), Positives = 76/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V++R +GR + + + +LQ + ++W + Sbjct: 77 PAFVLHSYPYRETSLIIDVLSRDHGRLALVAKGAKRPHSALRGVLQTFQPLALSWSGKSE 136 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L+ L G L +F +P +L+ + + Sbjct: 137 VRT---LTAAEWVGGMLPLAGDALLCGFYVNELLVKFCAREDPHPQLFHHYVVTMTRLAH 193 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-K 182 ++ E +LL+ G+ + L + V V + A+ Sbjct: 194 DEPPVQVLRSFERVLLRETGYAMALDRTVARKAVLAEGRYVFDPERGVREASDDLPAQWP 253 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 ++ + L E+ + + L ++ L + L R+ + Sbjct: 254 VIAGQTLLDMEQDDYHRAQTVAQSKT----LMRFLLNTYLGGTPLATRQILIDL 303 >gi|329894311|ref|ZP_08270181.1| DNA recombination and repair protein RecO [gamma proteobacterium IMCC3088] gi|328923107|gb|EGG30430.1| DNA recombination and repair protein RecO [gamma proteobacterium IMCC3088] Length = 237 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 58/169 (34%), Gaps = 7/169 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP----ILQAGNLVRV 56 M Q A +L R + E + I+++ T + GR V+ + R+ LQ + V Sbjct: 3 MGIQQPAFLLRKRPFQESSEIVDLFTPERGRVSCVVKGAKRKRLGGSLSQRLQLFRPLVV 62 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 ++ R E+ E + L F + L R L + E EL+ Sbjct: 63 RFQGRGDLKTLLDAEELHEPYT---LFGEGFYAAHYANELLLRVLQQEESYAELFADYAS 119 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP 165 L + S + E +L+ +G DL+ W Sbjct: 120 LLEVLEADSSPRAPIRRFEWSILQTLGAEPDLSTDANGEPIDPDKWYHF 168 >gi|47095411|ref|ZP_00233021.1| recombination protein O [Listeria monocytogenes str. 1/2a F6854] gi|254898374|ref|ZP_05258298.1| DNA repair protein RecO [Listeria monocytogenes J0161] gi|254912134|ref|ZP_05262146.1| recombination protein O [Listeria monocytogenes J2818] gi|254936462|ref|ZP_05268159.1| recombination protein O [Listeria monocytogenes F6900] gi|47016232|gb|EAL07155.1| recombination protein O [Listeria monocytogenes str. 1/2a F6854] gi|258609055|gb|EEW21663.1| recombination protein O [Listeria monocytogenes F6900] gi|293590106|gb|EFF98440.1| recombination protein O [Listeria monocytogenes J2818] Length = 255 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 67/186 (36%), Gaps = 1/186 (0%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I++ SY E + I+ + TR++G+ R + + + + Sbjct: 5 EGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSRLAAVTQLFTNGYFTFFGGNG 64 Query: 66 LGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 LG + EV+E+ + + Y L + ER+P LY++ L Sbjct: 65 LGTLQQGEVIETFSSIQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQILRDIDEG 124 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 + E+ +L +G + KC + G T S S G +C +M Sbjct: 125 YDPQILTQIYEMKMLPMLGLYPTMDKCAICGETTGHFDFSTSSNGIICHRCFEKDRYRMH 184 Query: 185 VLPSFL 190 + + + Sbjct: 185 LPENVV 190 >gi|299822894|ref|ZP_07054780.1| recombination protein O [Listeria grayi DSM 20601] gi|299816423|gb|EFI83661.1| recombination protein O [Listeria grayi DSM 20601] Length = 255 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 63/175 (36%), Gaps = 3/175 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLA 63 + I++ Y E + I+ + TR++G+ R + + + + Q + + + Sbjct: 5 EGIVIRQTDYRESDKIVVLYTREFGKIGVVARGAKKTKSRLAAVTQPFVNGYFTFFA-SS 63 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + E++++ + L Y L + E+ LY+++ L Sbjct: 64 GLGTLQQGELIQNFSSIQQDIFLTAYAAYICELLDKATDEKRANPSLYELVFQILRDIDE 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + E+ +L +GF + KC + G T S S G +C Sbjct: 124 GYDPEILVQLFEMKMLPVMGFYPVMDKCAICGETTGHFDFSTHSDGIICHRCFEK 178 >gi|71907659|ref|YP_285246.1| DNA repair protein RecO [Dechloromonas aromatica RCB] gi|92087026|sp|Q47EF5|RECO_DECAR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|71847280|gb|AAZ46776.1| DNA replication and repair protein RecO [Dechloromonas aromatica RCB] Length = 242 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 67/209 (32%), Gaps = 13/209 (6%) Query: 1 MYWQDD-----AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNL 53 M + A +L + E ++I+EV +R +GR R + R + +L A Sbjct: 1 MNLRSKVDSQPAYVLHSYPFRETSLIVEVFSRDFGRMALLARGARRPRSAIRGLLMAFQP 60 Query: 54 VRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 + + W + + LL+ G L LP + +L+ Sbjct: 61 LEIAWAGKGEVLTLM---KAEWQGGLPLLAGEALFCGYYLNELLMHLLPREDAHEQLFAS 117 Query: 114 LNIFLNCHKIPS---VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L V E LL+ +G+GL L + + + + + Sbjct: 118 YAKMLALLAADPSGKVREADLRCFEKALLQELGYGLTLNHDSDANLIEPDTFYTYRIEQG 177 Query: 171 VCRSVGLPYAEKMLVLPSFLWKEEQTIDA 199 R A +++ + L + + Sbjct: 178 PVRIDHGEGATQVVRGKTLLDLDAEDFSD 206 >gi|16800565|ref|NP_470833.1| DNA repair protein RecO [Listeria innocua Clip11262] gi|20139533|sp|Q92BQ0|RECO_LISIN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|16413970|emb|CAC96728.1| lin1497 [Listeria innocua Clip11262] Length = 255 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 68/186 (36%), Gaps = 1/186 (0%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I++ SY E + I+ + TR++G+ R + + + + Sbjct: 5 EGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSRLAAVTQLFTNGYFTFFGGNG 64 Query: 66 LGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 LG + EV+E+ + + Y L + ER+P LY++ L Sbjct: 65 LGTLQQGEVIENFSSIQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQILRDIDEG 124 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 + E+ +L +G + KC + G T S +S G +C +M Sbjct: 125 YDPQILTQIYEMKMLPVLGLYPTMDKCAICGETTGHFDFSTRSNGIICHRCFDKDRYRMH 184 Query: 185 VLPSFL 190 + + + Sbjct: 185 LPENVV 190 >gi|313618902|gb|EFR90766.1| DNA repair protein RecO [Listeria innocua FSL S4-378] Length = 255 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 68/186 (36%), Gaps = 1/186 (0%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I++ SY E + I+ + TR++G+ R + + + + Sbjct: 5 EGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSRLAAVTQLFTNGYFTFFGGNG 64 Query: 66 LGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 LG + EV+E+ + + Y L + ER+P LY++ L Sbjct: 65 LGTLQQGEVIENFSSIQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQILRDIDEG 124 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 + E+ +L +G + KC + G T S +S G +C +M Sbjct: 125 YDPQILTQIYEMKMLPVLGLYPTMDKCAICGETTGHFDFSTRSNGIICHRCFDKDRYRMH 184 Query: 185 VLPSFL 190 + + + Sbjct: 185 LPENVV 190 >gi|119361452|sp|Q13VN0|RECO_BURXL RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 299 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 33/234 (14%), Positives = 76/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V++R +GR + + + +LQ + ++W + Sbjct: 70 PAFVLHSYPYRETSLIIDVLSRDHGRLALVAKGAKRPHSALRGVLQTFQPLALSWSGKSE 129 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L+ L G L +F +P +L+ + + Sbjct: 130 VRT---LTGAEWVGGMLPLTGGALLCGFYVNELLVKFCAREDPHPQLFHHYVVTMTRLAH 186 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-K 182 ++ E +LL+ G+ + L + V V + A+ Sbjct: 187 DEPPVQVLRSFERVLLRETGYAMALDRTVARKAVLAEGRYVFDPERGVREAADDLPAQWP 246 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 ++ + L E+ + + L ++ L + L R+ + Sbjct: 247 VIAGQTLLDMEQDDYHRAQTVAQSKT----LMRFLLNTYLGGTPLATRQILIDL 296 >gi|91784705|ref|YP_559911.1| DNA repair protein RecO [Burkholderia xenovorans LB400] gi|91688659|gb|ABE31859.1| DNA replication and repair protein RecO [Burkholderia xenovorans LB400] Length = 306 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 33/234 (14%), Positives = 76/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V++R +GR + + + +LQ + ++W + Sbjct: 77 PAFVLHSYPYRETSLIIDVLSRDHGRLALVAKGAKRPHSALRGVLQTFQPLALSWSGKSE 136 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L+ L G L +F +P +L+ + + Sbjct: 137 VRT---LTGAEWVGGMLPLTGGALLCGFYVNELLVKFCAREDPHPQLFHHYVVTMTRLAH 193 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-K 182 ++ E +LL+ G+ + L + V V + A+ Sbjct: 194 DEPPVQVLRSFERVLLRETGYAMALDRTVARKAVLAEGRYVFDPERGVREAADDLPAQWP 253 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 ++ + L E+ + + L ++ L + L R+ + Sbjct: 254 VIAGQTLLDMEQDDYHRAQTVAQSKT----LMRFLLNTYLGGTPLATRQILIDL 303 >gi|238026619|ref|YP_002910850.1| DNA repair protein RecO [Burkholderia glumae BGR1] gi|237875813|gb|ACR28146.1| DNA repair protein RecO [Burkholderia glumae BGR1] Length = 281 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 70/234 (29%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L Y E ++I++V+TR +GR + + + +LQ + ++W + Sbjct: 52 PGFVLHSHPYRETSLIIDVLTRDHGRVALVAKGAKRPHSALRGVLQTFQPLALSWSGKSE 111 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L L G L +F +P L+ + L Sbjct: 112 ---MRTLTGAEWVGGMLPLGGDALLCGFYVNELLVKFCAREDPFPALFQHYLVTLARLAH 168 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-- 181 ++ E +LL+ G+ L + V V + + Sbjct: 169 DEPAVQVLRSFERVLLRETGYARALNRTVARRAVTADGRYVFDPERGVREAGDDTPSHWP 228 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 + +E+ A ++ + L + LN Y R+ + Sbjct: 229 IVSGQTLLDMEEDDYHRAQTVAQSKTLMRFLLNTYL----GGTPLATRQILIDL 278 >gi|194290150|ref|YP_002006057.1| DNA repair protein reco [Cupriavidus taiwanensis LMG 19424] gi|193223985|emb|CAQ69994.1| DNA repair protein [Cupriavidus taiwanensis LMG 19424] Length = 295 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 49/148 (33%), Gaps = 5/148 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L Y E ++IL+V TR YGR + + + +LQ + V V+W R Sbjct: 65 PGFVLHAWPYRETSLILDVFTRDYGRLSMVAKGAKRPHSALRAVLQHFHPVSVSWSGRGE 124 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + L L RF P + L+ L Sbjct: 125 VKTLTKAE-WVGGMPPLAGD--ALLSAFYLNELLMRFCPREDAHPVLFRHYLSTLTRLAH 181 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKC 151 G + E +LL+ GF + +C Sbjct: 182 GEPAGLVLRSFERVLLQETGFAVAFDQC 209 >gi|39995684|ref|NP_951635.1| DNA repair protein RecO [Geobacter sulfurreducens PCA] gi|61215122|sp|Q74FM9|RECO_GEOSL RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|39982447|gb|AAR33908.1| DNA repair protein RecO [Geobacter sulfurreducens PCA] gi|298504695|gb|ADI83418.1| DNA repair protein RecO [Geobacter sulfurreducens KN400] Length = 243 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 56/156 (35%), Gaps = 3/156 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 + +A++L Y E + I+ + T +G+ G R + R L+ + V Sbjct: 4 IRCEAVVLATMDYRESDRIVTLFTLCHGKVRGLARGARKSMRRFGGALEPFARLSVELVV 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R +++ + + +G ++ + R LP+ L+ +L +L Sbjct: 64 R-EGLSSLRGVDIVTVYPRIRQDLAAIGHGGYAVELVDRLLPDGASVPRLFRLLVSYLEH 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 E LL +G+ L L C GV Sbjct: 123 LDQGGASPSDRRFFEANLLNILGYRLSLDACAACGV 158 >gi|46907688|ref|YP_014077.1| DNA repair protein RecO [Listeria monocytogenes serotype 4b str. F2365] gi|47093467|ref|ZP_00231230.1| recombination protein O [Listeria monocytogenes str. 4b H7858] gi|226224061|ref|YP_002758168.1| RecO protein [Listeria monocytogenes Clip81459] gi|254824481|ref|ZP_05229482.1| recombination protein O [Listeria monocytogenes FSL J1-194] gi|254852085|ref|ZP_05241433.1| recombination protein O [Listeria monocytogenes FSL R2-503] gi|254932645|ref|ZP_05266004.1| recombination protein O [Listeria monocytogenes HPB2262] gi|255521275|ref|ZP_05388512.1| DNA repair protein RecO [Listeria monocytogenes FSL J1-175] gi|300765603|ref|ZP_07075582.1| recombination protein O [Listeria monocytogenes FSL N1-017] gi|61215088|sp|Q71ZL0|RECO_LISMF RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|259563681|sp|C1KVA7|RECO_LISMC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|46880957|gb|AAT04254.1| recombination protein O [Listeria monocytogenes serotype 4b str. F2365] gi|47018143|gb|EAL08913.1| recombination protein O [Listeria monocytogenes str. 4b H7858] gi|225876523|emb|CAS05232.1| Putative RecO protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605384|gb|EEW17992.1| recombination protein O [Listeria monocytogenes FSL R2-503] gi|293584204|gb|EFF96236.1| recombination protein O [Listeria monocytogenes HPB2262] gi|293593719|gb|EFG01480.1| recombination protein O [Listeria monocytogenes FSL J1-194] gi|300513704|gb|EFK40772.1| recombination protein O [Listeria monocytogenes FSL N1-017] gi|328465503|gb|EGF36732.1| DNA repair protein RecO [Listeria monocytogenes 1816] gi|332311901|gb|EGJ24996.1| DNA repair protein RecO [Listeria monocytogenes str. Scott A] Length = 255 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 68/186 (36%), Gaps = 1/186 (0%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I++ SY E + I+ + TR++G+ R + + + + + Sbjct: 5 EGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSRLAAVTQLFTNGYFTFFGSNG 64 Query: 66 LGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 LG + EV+E+ + + Y L + ER+P LY++ L Sbjct: 65 LGTLQQGEVIENFSSIQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQILRDINEG 124 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 + E+ +L +G + KC + G T S S G +C +M Sbjct: 125 YDPQILTQIFEMKMLPVLGLYPTMDKCAICGETTGHFDFSTSSNGIICHRCFEKDRYRMH 184 Query: 185 VLPSFL 190 + + + Sbjct: 185 LPENVV 190 >gi|224825226|ref|ZP_03698332.1| DNA repair protein RecO [Lutiella nitroferrum 2002] gi|224602897|gb|EEG09074.1| DNA repair protein RecO [Lutiella nitroferrum 2002] Length = 242 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 73/215 (33%), Gaps = 8/215 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSR 61 + A +L + Y E +++L+V+TR++GR R + R + +L + + W + Sbjct: 8 RQPAYVLHAQPYRETSLLLDVLTREHGRIALVARGARRPRSDLRGVLLPFQPLLLAWFGK 67 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 LS + G L + +P E + + + Sbjct: 68 SEVRTLH---TADWQGGVPQLSGLPLVCGFYLNELLIKLTARDDPHPETFGVYAEAVRGL 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 ++ + + EL L++ +G+ + + A+ R G P Sbjct: 125 ASGGLLSSVLRRFELGLVRTLGYAPAFDVDSNGREVEPDVPYLCGPEQALQRWQGGPVPA 184 Query: 182 KMLVLPSFLWKEEQTIDADSL---KSAFQLTDYFL 213 + V+ + D L + A +L FL Sbjct: 185 QQQVIEGRILLAMAGGDFSELATRREARRLMRLFL 219 >gi|94311352|ref|YP_584562.1| DNA repair protein RecO [Cupriavidus metallidurans CH34] gi|119361474|sp|Q1LKN3|RECO_RALME RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|93355204|gb|ABF09293.1| DNA repair protein recO (Recombination protein O) [Cupriavidus metallidurans CH34] Length = 298 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 75/233 (32%), Gaps = 10/233 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQ 64 +L Y E +++L+V TR +GR + + + +LQ + + ++W R Sbjct: 69 GFVLHAHPYRETSLVLDVFTRDHGRVAMVAKGAKRPHSALRAVLQHFHPIALSWTGRGEV 128 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 LS L G L RF P + L+ L Sbjct: 129 KTLTKAEY---VGGMLPLSGDALLSGFYLNELLLRFCPREDAHPTLFRHYMATLTRLSHG 185 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E +LL+ GF + +C+ +G V L +V G P + Sbjct: 186 EPASFVLRSFERVLLQETGFAVAFDQCLRSGERVQPGLDYVYQPERGVRRTHASDPSSWP 245 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 ++ + L + S + FL Y LQ R+ + Sbjct: 246 VVSGQTLLDMAQDDYSRAQTVSQSRALMRFLLHYYLQ---GAPLKTRQILIDL 295 >gi|15613932|ref|NP_242235.1| DNA repair protein RecO [Bacillus halodurans C-125] gi|20139774|sp|Q9KD50|RECO_BACHD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|10173985|dbj|BAB05088.1| BH1369 [Bacillus halodurans C-125] Length = 254 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 66/186 (35%), Gaps = 3/186 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M+ + + I++ YGE N I+ V TR+YG+ R + + + + Q + + Sbjct: 1 MFHKAEGIVIRTVDYGESNKIVTVFTREYGKIALMARGAKRPKSRLTAVTQLFTYGMMMF 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + + A + E+++S Y + + + L+++L + Sbjct: 61 Q-KNAGLGTLTQGEIIQSFREVRNDLFRASYVSYVTDLTNKLTEDEKRNPYLFELLYQTI 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + E+ + G +L +CV T + S K G +C+ Sbjct: 120 HYMNEGMDPDVLTRIFEVKMFTVAGIKPELDQCVSCRSTDVPVGFSIKEAGFLCKRCIEK 179 Query: 179 YAEKML 184 Sbjct: 180 DPHAYK 185 >gi|304310581|ref|YP_003810179.1| Recombinational DNA repair protein (RecF pathway) [gamma proteobacterium HdN1] gi|301796314|emb|CBL44522.1| Recombinational DNA repair protein (RecF pathway) [gamma proteobacterium HdN1] Length = 241 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 72/235 (30%), Gaps = 12/235 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRLAQ 64 A +L + + E + + EV R+ GR R + H +LQ V V++ R Sbjct: 10 AYVLQAKPWQETSALAEVFCRESGRVSIAFRGVRRGGHSKSSLLQPFQPVWVSYGGRHEL 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 G + LS + + G L R L + L+D L Sbjct: 70 RSGRQLESRA---ASVWLSGNALISGFYLNELLVRLLQREDAHPRLFDAYEESLALL-YA 125 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I E LL IG+ + + + G V RS P AE Sbjct: 126 GAIEPCLRIFERKLLAEIGYEIRFDHDANGEALVEGGWYCYRHEEGFVRRSGNEPRAEPC 185 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHL-LRENFLGKLL 237 + + D + T L + AL ++ L R F L Sbjct: 186 FSGGLLMAVGREEYDLLDVLR----TAKQLFRTALAPHLGSKPLVSRSLFRPSLK 236 >gi|156975790|ref|YP_001446697.1| recombinational DNA repair protein [Vibrio harveyi ATCC BAA-1116] gi|156527384|gb|ABU72470.1| hypothetical protein VIBHAR_03534 [Vibrio harveyi ATCC BAA-1116] Length = 219 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 70/217 (32%), Gaps = 11/217 (5%) Query: 20 IILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQNLGEFRFEVLESH 77 +IL+V + +YGR + +S R + LQ + + W + + + + Sbjct: 1 MILDVFSEEYGRITLMAKGARSKRSNLKGALQPFTPLLLKWSGKGS---MKTLRQAEPIS 57 Query: 78 CAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELM 137 L + + R L P L+ L + EL Sbjct: 58 LGLPLFGINLYSAMYVNELVGRVLMAEVPMPALFHDYLHALTELAQSDNPEPGLRRFELA 117 Query: 138 LLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTI 197 LL ++G+G+D C TG D + L E + + Sbjct: 118 LLSSMGYGVDFLHCAGTGEPVDPEMTYRYREQKGFIASVRRDNLTFLGNELIAISERRFV 177 Query: 198 DADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFL 233 + LK+A + T + AL+ + RE F+ Sbjct: 178 TKEQLKAAKRFT-----RMALKPYLGGKPLKSRELFI 209 >gi|229086867|ref|ZP_04219027.1| DNA repair protein recO [Bacillus cereus Rock3-44] gi|228696442|gb|EEL49267.1| DNA repair protein recO [Bacillus cereus Rock3-44] Length = 252 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 66/179 (36%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + II+ YGE N I+ + +R++G+ R + + + + + ++ Sbjct: 5 MFQKVEGIIIRTTDYGETNKIVTIFSREFGKVSAMARGAKKPKSRLASISQLMTHGHFLI 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG + + S ++ I + +++ L++ML L+ Sbjct: 65 QMGSGLGTLQQGEIISSMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQTLH 124 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + +L +G C + D + S + GG +C Sbjct: 125 YMCEGVDPEVLSLIYQTKMLPVLGMHPYFDTCAICHHEADFVAFSVREGGFLCSHHAEQ 183 >gi|254481220|ref|ZP_05094465.1| DNA repair protein RecO [marine gamma proteobacterium HTCC2148] gi|214038383|gb|EEB79045.1| DNA repair protein RecO [marine gamma proteobacterium HTCC2148] Length = 243 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 74/232 (31%), Gaps = 15/232 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP----ILQAGNLVRVNWRSRLA 63 IL R Y + ++ILEV ++GR + + +LQ + +++ R Sbjct: 9 YILHSRPYRDSSLILEVFCAEHGRLSLVSKGARRRSKGGSSVALLQPFIPLLLSFSGRSE 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + V + A L G+ L R L +P +L+ L Sbjct: 69 ---MKTLTHVEPAGVAPQLRGERLFSGMYINELLMRLLHRHDPHPQLFANYGTALGELGD 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDL--TKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 + + EL LL +G+G L +++D + G V G A Sbjct: 126 AEEVEVCLRRFELGLLDELGYGFSLAEDGLSGEAISEDGWYHFSPDCGLVAGVKGANPAR 185 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 L + ++ A + L + L + R+ F Sbjct: 186 PAYSGAELLLLSQGKYGGEARSVARR-----LMREVLAQYLGSEPLKSRDLF 232 >gi|299535812|ref|ZP_07049133.1| DNA repair protein RecO [Lysinibacillus fusiformis ZC1] gi|298729012|gb|EFI69566.1| DNA repair protein RecO [Lysinibacillus fusiformis ZC1] Length = 261 Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 78/222 (35%), Gaps = 5/222 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + + I+L VR+YGE N I+ ++TR+ G+ R + + + Sbjct: 1 MLHKWEGIVLKVRAYGESNKIVILLTREAGKVATMARGAKKPSSRLASITQPFTYGMFMV 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +G + E L S Y + + R + E +P +D+L L Sbjct: 61 QHHTGMGTLQQGEHLNSMRHIREDIMATAYASYIMELVERVVEEGKPEPFAFDVLLHALQ 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL-- 177 + I + +E +L G L C G S GG +C Sbjct: 121 AIEDGYDPEAITLFVEWKMLPYTGVQPILHACAACGAVDGEFAFSFAQGGFLCHRCYQHD 180 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSA--FQLTDYFLNKYA 217 PY ++ L + TI D + + T YF+ K Sbjct: 181 PYIIRLTPTQLKLIRMFYTIPIDQIGKIELKKETKYFIKKII 222 >gi|327440929|dbj|BAK17294.1| recombinational DNA repair protein [Solibacillus silvestris StLB046] Length = 257 Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 83/247 (33%), Gaps = 11/247 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-R 59 M + + I+L R+YGE N I+ +MTR+ G+ R + + + ++ Sbjct: 1 MLHKWEGIVLKARAYGESNKIVTLMTREAGKVACMARGAKKPTSRLAGVTQTFMHGSFLV 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + + E S Y + + R + E P +D+L LN Sbjct: 61 QRTSGMGTLQQGEHFNSMRHIQTDIVATAYASYIVEIVDRLVEEGRPEPYAFDILIQALN 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG--L 177 + I + ++ +L G L C G S GG +C Sbjct: 121 AIEEGYDPEAITLFVDWKMLPFAGIQPILHACAGCGAVDGEFAFSFTQGGFICHRCFHLD 180 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQL---TDYFLNK---YALQHNIIHCHLLREN 231 PY ++ L + T+ + + +L T F+ K + R Sbjct: 181 PYIIRLSPTQLKLIRMFYTVPIEQVGK-LELKPQTKQFIKKIVTTIYEEQTGIRLKSRN- 238 Query: 232 FLGKLLE 238 F+ +L Sbjct: 239 FIEQLER 245 >gi|315282356|ref|ZP_07870784.1| DNA repair protein RecO [Listeria marthii FSL S4-120] gi|313613998|gb|EFR87714.1| DNA repair protein RecO [Listeria marthii FSL S4-120] Length = 255 Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 68/186 (36%), Gaps = 1/186 (0%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I++ SY E + I+ + TR++G+ R + + + + Sbjct: 5 EGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSRLAAVTQLFTNGYFTFFGGNG 64 Query: 66 LGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 LG + EV+E+ + + Y L + ER+P LY++ L Sbjct: 65 LGTLQQGEVIENFSSIQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQILRDIDEG 124 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 + E+ +L +G + KC + G T S +S G +C +M Sbjct: 125 YDPQILTQIYEMKMLPVLGLYPTMDKCAICGETTGHFDFSTRSNGIICHRCFDRDRYRMH 184 Query: 185 VLPSFL 190 + + + Sbjct: 185 LPENVV 190 >gi|229019522|ref|ZP_04176339.1| DNA repair protein recO [Bacillus cereus AH1273] gi|229025764|ref|ZP_04182163.1| DNA repair protein recO [Bacillus cereus AH1272] gi|228735472|gb|EEL86068.1| DNA repair protein recO [Bacillus cereus AH1272] gi|228741778|gb|EEL91961.1| DNA repair protein recO [Bacillus cereus AH1273] Length = 252 Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 67/179 (37%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + I++ YGE N I+ + +R++G+ R + + + + + ++ Sbjct: 5 MFQKVEGIVIRTTDYGETNKIVTIFSREFGKVSAMARGAKKPKSRLAAVSQLMTHGHFLI 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG + + S ++ Y I + +++ L++ML L+ Sbjct: 65 QIGSGLGTLQQGEIISSMKEIREDIFLTAYASFIIELTDKATEDKKNNPYLFEMLYQTLH 124 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + +L +G C + D + S + GG +C Sbjct: 125 YMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAEQ 183 >gi|228993040|ref|ZP_04152963.1| DNA repair protein recO [Bacillus pseudomycoides DSM 12442] gi|228999090|ref|ZP_04158672.1| DNA repair protein recO [Bacillus mycoides Rock3-17] gi|229006638|ref|ZP_04164272.1| DNA repair protein recO [Bacillus mycoides Rock1-4] gi|228754499|gb|EEM03910.1| DNA repair protein recO [Bacillus mycoides Rock1-4] gi|228760707|gb|EEM09671.1| DNA repair protein recO [Bacillus mycoides Rock3-17] gi|228766688|gb|EEM15328.1| DNA repair protein recO [Bacillus pseudomycoides DSM 12442] Length = 252 Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 67/179 (37%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + I++ YGE N I+ + +R+ G+ R + + + + ++ ++ Sbjct: 5 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASISQLMMHGHFLI 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG + + S ++ I + +++ L++ML+ L+ Sbjct: 65 QMGSGLGTLQQGEIISSMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLHQTLH 124 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + +L +G C + D + S + GG +C Sbjct: 125 YMCEGVDAEVLSLIYQTKMLPVLGMHPYFDTCAICHQEADFVAFSVREGGFLCSRHAQQ 183 >gi|149183347|ref|ZP_01861785.1| DNA repair protein RecO [Bacillus sp. SG-1] gi|148848944|gb|EDL63156.1| DNA repair protein RecO [Bacillus sp. SG-1] Length = 250 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 68/189 (35%), Gaps = 3/189 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + + I++ +YGE N I+ + +R+ G+ R + R+ + Q + Sbjct: 1 MLQKCEGIVIRTNNYGESNKIVTIYSRENGKLGVMARGAKKTNSRLSSVSQLFTYGYFLY 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + + + + + + S Y + + + ER+P L++ML L Sbjct: 61 Q-KSSGLGTLQQADTIASMRNIREDLFKTAYATYVVDLIDKGTEERKPNPFLFEMLFQTL 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + E+ +L +G L KC V G T+ S K G +C Sbjct: 120 TYINEEYDPDIVTHIFEMKMLPVLGLHPSLDKCAVCGETEGEFSFSFKENGIICHRCIGN 179 Query: 179 YAEKMLVLP 187 V P Sbjct: 180 DPYHYKVSP 188 >gi|187924873|ref|YP_001896515.1| DNA repair protein RecO [Burkholderia phytofirmans PsJN] gi|187716067|gb|ACD17291.1| DNA repair protein RecO [Burkholderia phytofirmans PsJN] Length = 309 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 33/234 (14%), Positives = 75/234 (32%), Gaps = 11/234 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V++R +GR + + + +LQ + ++W + Sbjct: 80 PAFVLHSYPYRETSLIIDVLSRDHGRLALVAKGAKRPHSALRGVLQTFQPLALSWSGKSE 139 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L+ L G L +F +P +L+ + + Sbjct: 140 VRT---LTGAEWVGGMLPLAGDALLCGFYVNELLVKFCAREDPHPQLFHHYVVTMTRLAH 196 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-K 182 ++ E +LL+ G+ + L + V V + A Sbjct: 197 DEPPVQVLRSFERVLLRETGYAMALDRTVARKAVLADGRYVFDPERGVREASDDLPALWP 256 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 ++ + L E+ + + L ++ L + L R+ + Sbjct: 257 VIAGQTLLDMEQDDYHRAQTVAQSKT----LMRFLLNTYLGGTPLATRQILIDL 306 >gi|198283251|ref|YP_002219572.1| DNA repair protein RecO [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665687|ref|YP_002425834.1| DNA repair protein RecO, putative [Acidithiobacillus ferrooxidans ATCC 23270] gi|254790501|sp|B7J9K3|RECO_ACIF2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254790502|sp|B5EQL5|RECO_ACIF5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|198247772|gb|ACH83365.1| DNA repair protein RecO [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517900|gb|ACK78486.1| DNA repair protein RecO, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 255 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 82/240 (34%), Gaps = 12/240 (5%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRN-GQSHRMQPILQAGNLVRVNWRSRLA 63 D A +L YG+ ++I+E+ TR GR + ++ ++AG + V W R Sbjct: 7 DRAWVLHHYPYGDTSLIVELFTRTQGRLGVLAKGARRARSALARIEAGRPLWVRWLGRGE 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + E L+ L L R R+P +L+ + ++ Sbjct: 67 LPV---LAQAEELGPFLPLNPLQNLSLFYVNELLLRLTQRRDPFPDLFQVYEETIDALCS 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD----LLWVSPKSGGAVCRSVGLPY 179 G + E LL+N+G+ DL C G + D W+ + G CR+ Sbjct: 124 EPGEGWYLRRFERRLLENLGWAPDLAHCAECGRSPDAASSEHWLYQAAHGVFCRAHAPDA 183 Query: 180 AEKMLVLPSF-LWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 A + L QT S+ + L + L H R L Sbjct: 184 AVAIEAAALVWLRGAMQTRSMPVWNSSLRRC---LEQELLVHLGGRPLESRRLLTAYLRR 240 >gi|317128321|ref|YP_004094603.1| DNA repair protein RecO [Bacillus cellulosilyticus DSM 2522] gi|315473269|gb|ADU29872.1| DNA repair protein RecO [Bacillus cellulosilyticus DSM 2522] Length = 249 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 66/185 (35%), Gaps = 1/185 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + + +++ YGE N I+ + TR+ G+ R + + + A V + Sbjct: 1 MLQKVEGLVIRTNDYGETNKIVTIFTRENGKIALMARGAKRPKSRFASSAQIFVYGIFIY 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + +G + +V++S L +G + + R +RE L+++L Sbjct: 61 QSSTGIGTLSQSDVIDSFRDVRSDLKLTAHGAYIVELIDRLTEDRERNPFLFELLYQTFQ 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + E +L G LT+C G + S K G +C Sbjct: 121 FLNEGLDPEILTRIFETKMLHVAGVTPVLTQCTSCGSESEFYVFSMKQAGLLCGRCQYED 180 Query: 180 AEKML 184 + Sbjct: 181 PNHIK 185 >gi|313623741|gb|EFR93883.1| DNA repair protein RecO [Listeria innocua FSL J1-023] Length = 255 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 67/186 (36%), Gaps = 1/186 (0%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I++ SY E + I+ + TR++G+ R + + + + Sbjct: 5 EGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSRLAAVTQLFTNGYFTFFGGNG 64 Query: 66 LGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 LG + EV+E+ + Y L + ER+P LY++ L Sbjct: 65 LGTLQQGEVIENFSFIQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQILRDIDEG 124 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 + E+ +L +G + KC + G T S +S G +C +M Sbjct: 125 YDPQILTQIYEMKMLPVLGLYPTMDKCAICGETTGHFDFSTRSNGIICHRCFDKDRYRMH 184 Query: 185 VLPSFL 190 + + + Sbjct: 185 LPENVV 190 >gi|229098769|ref|ZP_04229707.1| DNA repair protein recO [Bacillus cereus Rock3-29] gi|229104929|ref|ZP_04235586.1| DNA repair protein recO [Bacillus cereus Rock3-28] gi|229117794|ref|ZP_04247159.1| DNA repair protein recO [Bacillus cereus Rock1-3] gi|228665657|gb|EEL21134.1| DNA repair protein recO [Bacillus cereus Rock1-3] gi|228678503|gb|EEL32723.1| DNA repair protein recO [Bacillus cereus Rock3-28] gi|228684613|gb|EEL38553.1| DNA repair protein recO [Bacillus cereus Rock3-29] Length = 252 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 67/179 (37%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + I++ YGE N I+ + +R++G+ R + + + + + ++ Sbjct: 5 MFQKVEGIVIRTTDYGETNKIVTIFSREFGKISAMARGAKKPKSRLASVSQLMTHGHFLI 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG + + S ++ Y + + +++ L++ML L+ Sbjct: 65 QVGSGLGTLQQGEIISTMKEIREDIFLTAYASFVVELTDKATEDKKHNPYLFEMLYQTLH 124 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + +L +G C + D + S + GG +C Sbjct: 125 YMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAEQ 183 >gi|146306509|ref|YP_001186974.1| DNA repair protein RecO [Pseudomonas mendocina ymp] gi|145574710|gb|ABP84242.1| DNA replication and repair protein RecO [Pseudomonas mendocina ymp] Length = 229 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 75/233 (32%), Gaps = 13/233 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A +L R Y E + +++ T GR +R + ++ I + + + R R Sbjct: 5 AYVLHSRPYKESSALVDFFTV-QGRVRAVLRAARG-KVGSIARPFAPLELELRGRGELKT 62 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 + + LLS GL L R LP +P + + + L Sbjct: 63 ---VGRLESAGIPLLLSGEALFSGLYLNELLIRLLPAEDPHPVMLEHYGLTLQALAADRP 119 Query: 127 IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVL 186 + + E LL +G+G L + + + + L Sbjct: 120 LEPLLRAFEWRLLDELGYGFALDRDQHDQPIDPTALYRWQHDIGLVPVIQLQ-PGVFQGR 178 Query: 187 PSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHL-LRENFLGKLLE 238 E +L +A + L + AL ++ L RE F+ L E Sbjct: 179 ELLAMAEADWQTPGALAAAKR-----LMRQALAPHLGGRPLVSRELFM-TLKE 225 >gi|256821982|ref|YP_003145945.1| DNA repair protein RecO [Kangiella koreensis DSM 16069] gi|256795521|gb|ACV26177.1| DNA repair protein RecO [Kangiella koreensis DSM 16069] Length = 239 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 6/178 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM---QPILQAGNLVRVNWRSRLA 63 A +L R + E ++I+E+ T + GR + + +R + +LQ ++V+W R Sbjct: 9 AFVLHTRPFKETSLIVELFTEESGRVNVLAKGVRGNRKNSNRALLQPFQPIKVSWFGRSE 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + L+ L L L R + +P +++ L ++ Sbjct: 69 LKTLKQVEAD---GFSHRLNGIASLSALYLNELLLRLFIQWDPHPDIFHFYQTSLQHLQL 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I + EL LL +G+ +D + ++ + + + P Sbjct: 126 GDKPNLILREFELELLDVLGYAIDWQHDIYGDAIEENMTYGFIAEQGFIPQLQAPSET 183 >gi|291613751|ref|YP_003523908.1| DNA repair protein RecO [Sideroxydans lithotrophicus ES-1] gi|291583863|gb|ADE11521.1| DNA repair protein RecO [Sideroxydans lithotrophicus ES-1] Length = 243 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 70/221 (31%), Gaps = 8/221 (3%) Query: 2 YWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNW 58 QD+ A +L + E ++ILEV +R++GR R + R + +L ++++W Sbjct: 9 RIQDEPAFVLHSYPFRETSLILEVFSRRHGRVALVARGARRPRSALRGLLMGFQPLQMSW 68 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + L + L G L + +P L+D L Sbjct: 69 FGKHELRTLH---SAEWQGGQPQLQGTALLCGFYLNELLLNLMARDDPHESLFDYYLQTL 125 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRSVGL 177 E +L+ +G+ L L +G + Sbjct: 126 QRLAQEDDHAFTLRCFEKHMLQELGYALLLENEADSGSPIVPTRNYRYILERGAIAEMAD 185 Query: 178 PYAEKMLVLPSFLWKEEQTI-DADSLKSAFQLTDYFLNKYA 217 + + L DA+S + + QL L+ + Sbjct: 186 SSQGMPVSGKTLLDMAADDYRDANSARQSKQLMRMLLDHHL 226 >gi|152976729|ref|YP_001376246.1| DNA repair protein RecO [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189039649|sp|A7GSZ3|RECO_BACCN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|152025481|gb|ABS23251.1| DNA repair protein RecO [Bacillus cytotoxicus NVH 391-98] Length = 248 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 68/179 (37%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + I++ YGE N I+ + +R++G+ R + + + + + ++ Sbjct: 1 MFQKVEGIVIRTTDYGETNKIVTIFSREFGKISVMARGAKKPKSRLASISQLMTHGHFLI 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG + E++ S L Y + + +++ L++ML L+ Sbjct: 61 QMGSGLGTLQQGEMISSMKEIREDIFLTAYASFIVELTDKATEDKKNNPYLFEMLYQTLH 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + +L +G C + D + S + GG +C Sbjct: 121 YMCDGVDPEVLSLIYQTKMLPVLGMHPYFDTCAICHQETDFVAFSVREGGFLCFRHAEQ 179 >gi|251793348|ref|YP_003008076.1| DNA repair protein RecO [Aggregatibacter aphrophilus NJ8700] gi|247534743|gb|ACS97989.1| DNA repair protein RecO [Aggregatibacter aphrophilus NJ8700] Length = 214 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 68/217 (31%), Gaps = 11/217 (5%) Query: 22 LEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCA 79 +++ T +GR + ++ R + +LQ + + W R + + A Sbjct: 1 MDLFTEDFGRLSVLAKGVRAKRSMLKGVLQPFTPLLLRWSGRGDLKVLTKAEP---AAIA 57 Query: 80 KLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLL 139 L G + R L +L+ L + + E LL Sbjct: 58 LPLQHVALYSGFYLNELICRVLEPETAYPQLFQQYLHCLTRLAVNQDVEPALRTFEFQLL 117 Query: 140 KNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDA 199 + +G+G+D T C +G + + + +++ + + Sbjct: 118 RTLGYGIDFTHCAGSGKAVEADMTYRYREEKGFIASLIKDNLTFYGRELLAFEQTRFEEP 177 Query: 200 DSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 L +A + T + AL+ + RE F Sbjct: 178 TILLAAKRFT-----RIALKPYLGDKPLKSRELFTQY 209 >gi|297584642|ref|YP_003700422.1| DNA repair protein RecO [Bacillus selenitireducens MLS10] gi|297143099|gb|ADH99856.1| DNA repair protein RecO [Bacillus selenitireducens MLS10] Length = 256 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 71/191 (37%), Gaps = 1/191 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-R 59 M + + I++ YGE N ++ V +++ G+ R + + V+ + Sbjct: 1 MLHRVEGIVIRANDYGENNKVVTVYSKEQGKVALMARGAKKPGSRFAASTQLFVQAVFVY 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R +++ES + L YG I + R + + P +LY+ L L Sbjct: 61 HRQHGMGSLNAADLIESFISVRKDVLLTTYGACMIELIDRLVEDHIPDGQLYETLYQLLR 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + +E+ +L+ G L +C G + S GGA+C+ Sbjct: 121 RLDEGDDPAVLLAIMEVKMLRYAGVDPVLHQCASCGSVELPFQFSMTYGGALCKRCLHKD 180 Query: 180 AEKMLVLPSFL 190 + V P+ + Sbjct: 181 HHVVYVNPAVM 191 >gi|229013518|ref|ZP_04170652.1| DNA repair protein recO [Bacillus mycoides DSM 2048] gi|229061991|ref|ZP_04199317.1| DNA repair protein recO [Bacillus cereus AH603] gi|229135123|ref|ZP_04263925.1| DNA repair protein recO [Bacillus cereus BDRD-ST196] gi|229169046|ref|ZP_04296762.1| DNA repair protein recO [Bacillus cereus AH621] gi|228614455|gb|EEK71564.1| DNA repair protein recO [Bacillus cereus AH621] gi|228648352|gb|EEL04385.1| DNA repair protein recO [Bacillus cereus BDRD-ST196] gi|228717300|gb|EEL68973.1| DNA repair protein recO [Bacillus cereus AH603] gi|228747755|gb|EEL97624.1| DNA repair protein recO [Bacillus mycoides DSM 2048] Length = 252 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 67/179 (37%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + I++ YGE N I+ + +R++G+ R + + + + + ++ Sbjct: 5 MFQKVEGIVIRTTDYGETNKIVTIYSREFGKVSAMARGAKKPKSRLAAISQLMTHGHFLI 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG + + S ++ Y I + +++ L++ML L+ Sbjct: 65 QMGSGLGTLQQGEIISSMKEIREDIFLTAYASFIIELTDKATEDKKHNPYLFEMLYQTLH 124 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + +L +G C + D + S + GG +C Sbjct: 125 YMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAEQ 183 >gi|310822251|ref|YP_003954609.1| DNA repair protein RecO [Stigmatella aurantiaca DW4/3-1] gi|309395323|gb|ADO72782.1| DNA repair protein RecO [Stigmatella aurantiaca DW4/3-1] Length = 244 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 66/178 (37%), Gaps = 3/178 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR 59 + D+A++L YGE + ++ ++TRQ+G+ F + + + L+ +RV+ Sbjct: 3 RFVDEALVLSTVDYGEADRMVTLLTRQHGKLTAFAAGARKSKRRFAGALEPFMYLRVHLV 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + ++L + A L L ++ + EP EL+ +L +L Sbjct: 63 ETRGSTVRLDSTDILAGYYAARQELPLIARALYAVEMCRELTRDHEPHPELFALLEEYLV 122 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLL-WVSPKSGGAVCRSVG 176 + EL L + G C + G GGAVC G Sbjct: 123 RLNAKEAGPTSLLAFELSALAHAGLMPRFDACALCGGEPGERPRFDQAHGGAVCEPCG 180 >gi|228910132|ref|ZP_04073952.1| DNA repair protein recO [Bacillus thuringiensis IBL 200] gi|228954582|ref|ZP_04116607.1| DNA repair protein recO [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229071801|ref|ZP_04205016.1| DNA repair protein recO [Bacillus cereus F65185] gi|229081558|ref|ZP_04214056.1| DNA repair protein recO [Bacillus cereus Rock4-2] gi|229180575|ref|ZP_04307917.1| DNA repair protein recO [Bacillus cereus 172560W] gi|229192507|ref|ZP_04319470.1| DNA repair protein recO [Bacillus cereus ATCC 10876] gi|228591084|gb|EEK48940.1| DNA repair protein recO [Bacillus cereus ATCC 10876] gi|228602999|gb|EEK60478.1| DNA repair protein recO [Bacillus cereus 172560W] gi|228701763|gb|EEL54251.1| DNA repair protein recO [Bacillus cereus Rock4-2] gi|228711396|gb|EEL63356.1| DNA repair protein recO [Bacillus cereus F65185] gi|228805239|gb|EEM51833.1| DNA repair protein recO [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228849649|gb|EEM94483.1| DNA repair protein recO [Bacillus thuringiensis IBL 200] Length = 252 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 64/179 (35%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + I++ YGE N I+ + +R+ G+ R + + + + + + Sbjct: 5 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGQFLI 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG + + S ++ I + +++ L++ML L+ Sbjct: 65 QMGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQTLH 124 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + +L +G C + D + S + GG +C Sbjct: 125 YMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAEQ 183 >gi|163942054|ref|YP_001646938.1| DNA repair protein RecO [Bacillus weihenstephanensis KBAB4] gi|229470329|sp|A9VHS5|RECO_BACWK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|163864251|gb|ABY45310.1| DNA repair protein RecO [Bacillus weihenstephanensis KBAB4] Length = 248 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 67/179 (37%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + I++ YGE N I+ + +R++G+ R + + + + + ++ Sbjct: 1 MFQKVEGIVIRTTDYGETNKIVTIYSREFGKVSAMARGAKKPKSRLAAISQLMTHGHFLI 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG + + S ++ Y I + +++ L++ML L+ Sbjct: 61 QMGSGLGTLQQGEIISSMKEIREDIFLTAYASFIIELTDKATEDKKHNPYLFEMLYQTLH 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + +L +G C + D + S + GG +C Sbjct: 121 YMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAEQ 179 >gi|206971346|ref|ZP_03232297.1| DNA repair protein RecO [Bacillus cereus AH1134] gi|206734118|gb|EDZ51289.1| DNA repair protein RecO [Bacillus cereus AH1134] Length = 248 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 64/179 (35%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + I++ YGE N I+ + +R+ G+ R + + + + + + Sbjct: 1 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGQFLI 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG + + S ++ I + +++ L++ML L+ Sbjct: 61 QMGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQTLH 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + +L +G C + D + S + GG +C Sbjct: 121 YMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAEQ 179 >gi|228941463|ref|ZP_04104014.1| DNA repair protein recO [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228960563|ref|ZP_04122212.1| DNA repair protein recO [Bacillus thuringiensis serovar pakistani str. T13001] gi|228974394|ref|ZP_04134963.1| DNA repair protein recO [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980987|ref|ZP_04141290.1| DNA repair protein recO [Bacillus thuringiensis Bt407] gi|229048017|ref|ZP_04193593.1| DNA repair protein recO [Bacillus cereus AH676] gi|229111771|ref|ZP_04241319.1| DNA repair protein recO [Bacillus cereus Rock1-15] gi|229146883|ref|ZP_04275248.1| DNA repair protein recO [Bacillus cereus BDRD-ST24] gi|228636711|gb|EEK93176.1| DNA repair protein recO [Bacillus cereus BDRD-ST24] gi|228671765|gb|EEL27061.1| DNA repair protein recO [Bacillus cereus Rock1-15] gi|228723474|gb|EEL74843.1| DNA repair protein recO [Bacillus cereus AH676] gi|228778778|gb|EEM27042.1| DNA repair protein recO [Bacillus thuringiensis Bt407] gi|228785444|gb|EEM33454.1| DNA repair protein recO [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228799163|gb|EEM46131.1| DNA repair protein recO [Bacillus thuringiensis serovar pakistani str. T13001] gi|228818244|gb|EEM64318.1| DNA repair protein recO [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 252 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 65/179 (36%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + I++ YGE N I+ + +R+ G+ R + + + + + ++ Sbjct: 5 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGHFLI 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG + + S ++ I + +++ L++ML L+ Sbjct: 65 QMGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQTLH 124 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + +L +G C + D + S + GG +C Sbjct: 125 YMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAEQ 183 >gi|296504792|ref|YP_003666492.1| DNA repair protein RecO [Bacillus thuringiensis BMB171] gi|296325844|gb|ADH08772.1| DNA repair protein RecO [Bacillus thuringiensis BMB171] gi|326942080|gb|AEA17976.1| DNA repair protein RecO [Bacillus thuringiensis serovar chinensis CT-43] Length = 248 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 65/179 (36%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + I++ YGE N I+ + +R+ G+ R + + + + + ++ Sbjct: 1 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGHFLI 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG + + S ++ I + +++ L++ML L+ Sbjct: 61 QMGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQTLH 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + +L +G C + D + S + GG +C Sbjct: 121 YMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAEQ 179 >gi|328474972|gb|EGF45766.1| DNA repair protein RecO [Listeria monocytogenes 220] Length = 254 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 65/186 (34%), Gaps = 2/186 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ-SHRMQPILQAGNLVRVNWRSRLAQ 64 + I++ SY E + I+ + TR++G+ R + R+ + Q + Sbjct: 5 EGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKTKSRLAAVTQLFTNGYFTFFGSNGL 64 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + +E+ + + Y L + ER+P LY++ L Sbjct: 65 GTLQQGEV-IENFSSIQQDIFMTAYATYVCELLDKATEERQPNPYLYELTFQILRDINEG 123 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 + E+ +L +G + KC + G T S S G +C +M Sbjct: 124 YDPQILTQIFEMKMLPVLGLYPTMDKCAICGETTGHFDFSTSSNGIICHRCFEKDRYRMH 183 Query: 185 VLPSFL 190 + + + Sbjct: 184 LPENVV 189 >gi|65321671|ref|ZP_00394630.1| COG1381: Recombinational DNA repair protein (RecF pathway) [Bacillus anthracis str. A2012] gi|228916930|ref|ZP_04080492.1| DNA repair protein recO [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929341|ref|ZP_04092366.1| DNA repair protein recO [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935618|ref|ZP_04098433.1| DNA repair protein recO [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228948011|ref|ZP_04110297.1| DNA repair protein recO [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229093367|ref|ZP_04224474.1| DNA repair protein recO [Bacillus cereus Rock3-42] gi|229123836|ref|ZP_04253030.1| DNA repair protein recO [Bacillus cereus 95/8201] gi|229141035|ref|ZP_04269578.1| DNA repair protein recO [Bacillus cereus BDRD-ST26] gi|229157912|ref|ZP_04285986.1| DNA repair protein recO [Bacillus cereus ATCC 4342] gi|229163243|ref|ZP_04291198.1| DNA repair protein recO [Bacillus cereus R309803] gi|229186537|ref|ZP_04313699.1| DNA repair protein recO [Bacillus cereus BGSC 6E1] gi|229198424|ref|ZP_04325130.1| DNA repair protein recO [Bacillus cereus m1293] gi|228585124|gb|EEK43236.1| DNA repair protein recO [Bacillus cereus m1293] gi|228596968|gb|EEK54626.1| DNA repair protein recO [Bacillus cereus BGSC 6E1] gi|228620306|gb|EEK77177.1| DNA repair protein recO [Bacillus cereus R309803] gi|228625571|gb|EEK82324.1| DNA repair protein recO [Bacillus cereus ATCC 4342] gi|228642468|gb|EEK98756.1| DNA repair protein recO [Bacillus cereus BDRD-ST26] gi|228659657|gb|EEL15303.1| DNA repair protein recO [Bacillus cereus 95/8201] gi|228690023|gb|EEL43824.1| DNA repair protein recO [Bacillus cereus Rock3-42] gi|228811701|gb|EEM58036.1| DNA repair protein recO [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228824058|gb|EEM69875.1| DNA repair protein recO [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830355|gb|EEM75967.1| DNA repair protein recO [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842754|gb|EEM87840.1| DNA repair protein recO [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 252 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 65/179 (36%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + I++ YGE N I+ + +R+ G+ R + + + + + ++ Sbjct: 5 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGHFLI 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG + + S ++ I + +++ L++ML L+ Sbjct: 65 QMGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQTLH 124 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + +L +G C + D + S + GG +C Sbjct: 125 YMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAEQ 183 >gi|30264368|ref|NP_846745.1| DNA repair protein RecO [Bacillus anthracis str. Ames] gi|47778304|ref|YP_021168.2| DNA repair protein RecO [Bacillus anthracis str. 'Ames Ancestor'] gi|49187194|ref|YP_030446.1| DNA repair protein RecO [Bacillus anthracis str. Sterne] gi|49481310|ref|YP_038354.1| DNA repair protein RecO [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141205|ref|YP_085625.1| DNA repair protein RecO [Bacillus cereus E33L] gi|165872031|ref|ZP_02216671.1| recombination protein O [Bacillus anthracis str. A0488] gi|167634555|ref|ZP_02392875.1| recombination protein O [Bacillus anthracis str. A0442] gi|167638589|ref|ZP_02396865.1| recombination protein O [Bacillus anthracis str. A0193] gi|170687502|ref|ZP_02878719.1| recombination protein O [Bacillus anthracis str. A0465] gi|170707433|ref|ZP_02897887.1| recombination protein O [Bacillus anthracis str. A0389] gi|177653249|ref|ZP_02935501.1| recombination protein O [Bacillus anthracis str. A0174] gi|190566916|ref|ZP_03019832.1| recombination protein O [Bacillus anthracis Tsiankovskii-I] gi|196039289|ref|ZP_03106595.1| recombination protein O [Bacillus cereus NVH0597-99] gi|196046321|ref|ZP_03113547.1| recombination protein O [Bacillus cereus 03BB108] gi|217961788|ref|YP_002340358.1| DNA repair protein RecO [Bacillus cereus AH187] gi|218905435|ref|YP_002453269.1| recombination protein O [Bacillus cereus AH820] gi|225866279|ref|YP_002751657.1| DNA repair protein RecO [Bacillus cereus 03BB102] gi|227817074|ref|YP_002817083.1| DNA repair protein RecO [Bacillus anthracis str. CDC 684] gi|229603091|ref|YP_002868587.1| DNA repair protein RecO [Bacillus anthracis str. A0248] gi|254684055|ref|ZP_05147915.1| DNA repair protein RecO [Bacillus anthracis str. CNEVA-9066] gi|254721889|ref|ZP_05183678.1| DNA repair protein RecO [Bacillus anthracis str. A1055] gi|254736403|ref|ZP_05194109.1| DNA repair protein RecO [Bacillus anthracis str. Western North America USA6153] gi|254741441|ref|ZP_05199128.1| DNA repair protein RecO [Bacillus anthracis str. Kruger B] gi|254750879|ref|ZP_05202918.1| DNA repair protein RecO [Bacillus anthracis str. Vollum] gi|254757793|ref|ZP_05209820.1| DNA repair protein RecO [Bacillus anthracis str. Australia 94] gi|301055791|ref|YP_003794002.1| DNA repair protein RecO [Bacillus anthracis CI] gi|42559458|sp|Q81LT9|RECO_BACAN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|61214838|sp|Q634P2|RECO_BACCZ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|61215015|sp|Q6HDM2|RECO_BACHK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226737854|sp|B7JN23|RECO_BACC0 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226737857|sp|B7HPJ7|RECO_BACC7 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254790509|sp|C3P8K4|RECO_BACAA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254790510|sp|C3L5Q1|RECO_BACAC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254790511|sp|C1ESJ2|RECO_BACC3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|30259026|gb|AAP28231.1| DNA repair protein RecO [Bacillus anthracis str. Ames] gi|47552009|gb|AAT33643.2| recombination protein O [Bacillus anthracis str. 'Ames Ancestor'] gi|49181121|gb|AAT56497.1| recombination protein O [Bacillus anthracis str. Sterne] gi|49332866|gb|AAT63512.1| recombination protein O (DNA repair protein) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974674|gb|AAU16224.1| recombination protein O (DNA repair protein O) [Bacillus cereus E33L] gi|164712162|gb|EDR17699.1| recombination protein O [Bacillus anthracis str. A0488] gi|167513437|gb|EDR88807.1| recombination protein O [Bacillus anthracis str. A0193] gi|167530007|gb|EDR92742.1| recombination protein O [Bacillus anthracis str. A0442] gi|170127677|gb|EDS96550.1| recombination protein O [Bacillus anthracis str. A0389] gi|170668697|gb|EDT19443.1| recombination protein O [Bacillus anthracis str. A0465] gi|172081531|gb|EDT66603.1| recombination protein O [Bacillus anthracis str. A0174] gi|190561907|gb|EDV15876.1| recombination protein O [Bacillus anthracis Tsiankovskii-I] gi|196022791|gb|EDX61472.1| recombination protein O [Bacillus cereus 03BB108] gi|196029916|gb|EDX68517.1| recombination protein O [Bacillus cereus NVH0597-99] gi|217063057|gb|ACJ77307.1| recombination protein O [Bacillus cereus AH187] gi|218539840|gb|ACK92238.1| recombination protein O [Bacillus cereus AH820] gi|225789516|gb|ACO29733.1| DNA repair protein RecO [Bacillus cereus 03BB102] gi|227007270|gb|ACP17013.1| DNA repair protein RecO [Bacillus anthracis str. CDC 684] gi|229267499|gb|ACQ49136.1| DNA repair protein RecO [Bacillus anthracis str. A0248] gi|300377960|gb|ADK06864.1| DNA repair protein RecO [Bacillus cereus biovar anthracis str. CI] gi|324328202|gb|ADY23462.1| DNA repair protein RecO [Bacillus thuringiensis serovar finitimus YBT-020] Length = 248 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 65/179 (36%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + I++ YGE N I+ + +R+ G+ R + + + + + ++ Sbjct: 1 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGHFLI 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG + + S ++ I + +++ L++ML L+ Sbjct: 61 QMGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQTLH 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + +L +G C + D + S + GG +C Sbjct: 121 YMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAEQ 179 >gi|228987548|ref|ZP_04147667.1| DNA repair protein recO [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228772280|gb|EEM20727.1| DNA repair protein recO [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 252 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 65/179 (36%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + I++ YGE N I+ + +R+ G+ R + + + + + ++ Sbjct: 5 MFQKVEGIVIRTIDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGHFLI 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG + + S ++ I + +++ L++ML L+ Sbjct: 65 QMGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQTLH 124 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + +L +G C + D + S + GG +C Sbjct: 125 YMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAEQ 183 >gi|229031946|ref|ZP_04187933.1| DNA repair protein recO [Bacillus cereus AH1271] gi|229174972|ref|ZP_04302492.1| DNA repair protein recO [Bacillus cereus MM3] gi|228608640|gb|EEK65942.1| DNA repair protein recO [Bacillus cereus MM3] gi|228729410|gb|EEL80400.1| DNA repair protein recO [Bacillus cereus AH1271] Length = 252 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 65/179 (36%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + I++ YGE N I+ + +R+ G+ R + + + + + N+ Sbjct: 5 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGNFLI 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG + + S ++ I + +++ L++ML L+ Sbjct: 65 QMGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQTLH 124 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + +L +G C + D + S + GG +C Sbjct: 125 YMCEGVDSEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAEQ 183 >gi|228923050|ref|ZP_04086343.1| DNA repair protein recO [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836683|gb|EEM82031.1| DNA repair protein recO [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 252 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 65/179 (36%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + I++ YGE N I+ + +R+ G+ R + + + + + ++ Sbjct: 5 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGHFLI 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG + + S ++ I + +++ L++ML L+ Sbjct: 65 QMGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQTLH 124 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + +L +G C + D + S + GG +C Sbjct: 125 YMCEGVDSEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAEQ 183 >gi|47567862|ref|ZP_00238570.1| DNA repair protein RecO [Bacillus cereus G9241] gi|118479468|ref|YP_896619.1| DNA repair protein RecO [Bacillus thuringiensis str. Al Hakam] gi|222097743|ref|YP_002531800.1| DNA repair protein reco [Bacillus cereus Q1] gi|47555539|gb|EAL13882.1| DNA repair protein RecO [Bacillus cereus G9241] gi|118418693|gb|ABK87112.1| DNA replication and repair protein RecO [Bacillus thuringiensis str. Al Hakam] gi|221241801|gb|ACM14511.1| recombination protein O [Bacillus cereus Q1] Length = 257 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 65/179 (36%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + I++ YGE N I+ + +R+ G+ R + + + + + ++ Sbjct: 10 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGHFLI 69 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG + + S ++ I + +++ L++ML L+ Sbjct: 70 QMGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQTLH 129 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + +L +G C + D + S + GG +C Sbjct: 130 YMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAEQ 188 >gi|228902821|ref|ZP_04066966.1| DNA repair protein recO [Bacillus thuringiensis IBL 4222] gi|228967363|ref|ZP_04128398.1| DNA repair protein recO [Bacillus thuringiensis serovar sotto str. T04001] gi|228792398|gb|EEM39965.1| DNA repair protein recO [Bacillus thuringiensis serovar sotto str. T04001] gi|228856830|gb|EEN01345.1| DNA repair protein recO [Bacillus thuringiensis IBL 4222] Length = 252 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 65/179 (36%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + I++ YGE N I+ + +R+ G+ R + + + + + ++ Sbjct: 5 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKISAMARGAKKPKSRLASVSQLMTHGHFLI 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG + + S ++ I + +++ L++ML L+ Sbjct: 65 QMGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQTLH 124 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + +L +G C + D + S + GG +C Sbjct: 125 YMCEGVDSEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAEQ 183 >gi|218899464|ref|YP_002447875.1| recombination protein O [Bacillus cereus G9842] gi|226737855|sp|B7IYE9|RECO_BACC2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|218545290|gb|ACK97684.1| recombination protein O [Bacillus cereus G9842] Length = 248 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 65/179 (36%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + I++ YGE N I+ + +R+ G+ R + + + + + ++ Sbjct: 1 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKISAMARGAKKPKSRLASVSQLMTHGHFLI 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG + + S ++ I + +++ L++ML L+ Sbjct: 61 QMGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQTLH 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + +L +G C + D + S + GG +C Sbjct: 121 YMCEGVDSEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAEQ 179 >gi|75761899|ref|ZP_00741824.1| DNA repair protein recO [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74490607|gb|EAO53898.1| DNA repair protein recO [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 257 Score = 99.9 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 65/179 (36%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + I++ YGE N I+ + +R+ G+ R + + + + + ++ Sbjct: 10 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKISAMARGAKKPKSRLASVSQLMTHGHFLI 69 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG + + S ++ I + +++ L++ML L+ Sbjct: 70 QMGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQTLH 129 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + +L +G C + D + S + GG +C Sbjct: 130 YMCEGVDSEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAEQ 188 >gi|5114185|gb|AAD40231.1|AF123492_3 RecO [Pseudomonas aeruginosa] Length = 203 Score = 99.9 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 5/156 (3%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLG 67 +L R Y E + +++ T GR +R + + + + + WR R Sbjct: 10 YVLHSRPYKETSALVDFFTP-LGRLRAVLRGARG-KAGALARPFVPLEAEWRGRGELKT- 66 Query: 68 EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI 127 + + LL+ GL L R LP +P E++ L I Sbjct: 67 --VARLESAGVPNLLNGQALFSGLYLNELLIRLLPAEDPQPEIFAHYAATLPLLAAGRPI 124 Query: 128 GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV 163 + E LL+ +G+G L + + Sbjct: 125 EPLLRAFEWRLLEQLGYGFALDVDIDGRPIEPQALY 160 >gi|148981905|ref|ZP_01816563.1| DNA repair protein RecO [Vibrionales bacterium SWAT-3] gi|145960706|gb|EDK26048.1| DNA repair protein RecO [Vibrionales bacterium SWAT-3] Length = 222 Score = 99.9 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 69/217 (31%), Gaps = 11/217 (5%) Query: 20 IILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQNLGEFRFEVLESH 77 +IL++ + ++GR + +S R + LQ + + W + + + Sbjct: 1 MILDIFSEEFGRVTLMSKGARSKRSNLKGALQPFTPLLLKWSGNSS---MKTLRQAEPIS 57 Query: 78 CAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELM 137 L+ + + R L P L+ L + EL Sbjct: 58 LGLPLTGINLYSAMYVNELIGRVLMAEVPMPALFHDYLHALTELAHNENPEPALRRFELA 117 Query: 138 LLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTI 197 LL +G+G+D C TG D + + E + I Sbjct: 118 LLSAMGYGVDFLHCAGTGEPIDPTMTYRYREQKGFIASVRRDNLTFMGDELIAISERRFI 177 Query: 198 DADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFL 233 + LK+A + T + AL+ + RE FL Sbjct: 178 TKEQLKAAKRFT-----RIALKPYLGGKPLKSRELFL 209 >gi|319651592|ref|ZP_08005719.1| DNA repair protein RecO [Bacillus sp. 2_A_57_CT2] gi|317396659|gb|EFV77370.1| DNA repair protein RecO [Bacillus sp. 2_A_57_CT2] Length = 250 Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 66/179 (36%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-R 59 M + + I++ +Y E N I+ + TR++G+ R + + N+ Sbjct: 1 MLDKCEGIVIRTTNYSETNKIVTLYTREWGKVGVMARGAKKPNSRLAAVTQLFTYGNFLV 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + + +++ S + L Y + + + +++P L+++L LN Sbjct: 61 QRGSGLGTLQQGDMISSMRSIKEDIFLTAYASYIVDLTDKSIEDKKPNPFLFELLYQTLN 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + E+ +L +G L +C V G T S + G +C Sbjct: 121 LINEGYDPEILTNIYEMKMLNALGLYPVLDQCSVCGSTDGHFAFSIRENGLICHRCLDK 179 >gi|114564091|ref|YP_751605.1| DNA repair protein RecO [Shewanella frigidimarina NCIMB 400] gi|114335384|gb|ABI72766.1| DNA repair protein RecO [Shewanella frigidimarina NCIMB 400] Length = 240 Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 36/239 (15%), Positives = 71/239 (29%), Gaps = 15/239 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWRSRLA- 63 +L R + E ++I+ ++ GR R ++ ILQ + + + ++ Sbjct: 6 RGYVLHHRQFRESSVIVNLLVEGVGRVDAITRVGSGKRSIKSILQPFQPLIIQFSAKSEA 65 Query: 64 -QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + ++ + A LS + G L R L L+ + L Sbjct: 66 RNLGLKNITQIESAAPAMPLSGNSLYSGFYLNEILVRLLSVDHQAEGLFLDYHRALLALA 125 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG-----AVCRSVGL 177 + E+ LL +G L + + A + Sbjct: 126 KQFCSSHLR-YFEMALLLELGALPSLAYDTQGDSLDNRCHYRFIAESGFIPVATTQESPF 184 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 + + L L Q + + A L +Y L + + L R+ F K Sbjct: 185 SHGKGCLSGAMLLALASQNLQPEQFNQAKG-----LMRYLLTPLLGNKPLLSRQLFSNK 238 >gi|229543821|ref|ZP_04432880.1| DNA repair protein RecO [Bacillus coagulans 36D1] gi|229324960|gb|EEN90636.1| DNA repair protein RecO [Bacillus coagulans 36D1] Length = 255 Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 66/176 (37%), Gaps = 1/176 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + I++ YGE N IL + T+++G+ R + + + N+ Sbjct: 1 MFEKCEGIVIKNTDYGESNKILHIYTKEFGKLGFMARGAKKPNSRLAAVSQVFTYGNFLF 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + ++ L + E + Y + L R + +++ L+++L L Sbjct: 61 QPSRGLATLQQGETVSPMRHIREDIFKTAYAAYVVELLGRAVEDKKKNPSLFELLLRTLE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 I E+ +L +G + KC V G T+ S + G +C Sbjct: 121 YIDEGYDPEIIRDIFEMKMLNVLGMYPVMDKCAVCGNTEGPFAFSIRENGLLCPRC 176 >gi|91775219|ref|YP_544975.1| DNA repair protein RecO [Methylobacillus flagellatus KT] gi|91775363|ref|YP_545119.1| DNA repair protein RecO [Methylobacillus flagellatus KT] gi|91709206|gb|ABE49134.1| DNA repair protein RecO [Methylobacillus flagellatus KT] gi|91709350|gb|ABE49278.1| DNA replication and repair protein RecO [Methylobacillus flagellatus KT] Length = 244 Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 74/234 (31%), Gaps = 13/234 (5%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++++E+ +R++GR + + R + +LQA ++ W + Sbjct: 15 YVLHTYPFKETSLVVELFSREFGRVAAVAKGARRPRSAMRGMLQAFQPLQATWSGKAELK 74 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + LL + G L R LP + L+D + L Sbjct: 75 NLH---SMEWGAGLLLLRGEALMCGFYLNELLLRLLPREDGHDALFDYYSQTLRILAQDQ 131 Query: 126 -VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG--AVCRSVGLPYAEK 182 + + EL +L+ +G+ + L + S + A P Sbjct: 132 VPVATTLRRFELRMLQELGYAVPLEYDEAGNAIKPEHMYSYVAEQGAAPTSQHVAPPNGV 191 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 L + L + + + L + L H + R+ + Sbjct: 192 QLSGKTLLAMAQDDYSDALTQQQSK----QLMRALLAHYLGDKPLHTRQLLMDL 241 >gi|126173441|ref|YP_001049590.1| DNA repair protein RecO [Shewanella baltica OS155] gi|125996646|gb|ABN60721.1| DNA repair protein RecO [Shewanella baltica OS155] Length = 236 Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 78/232 (33%), Gaps = 12/232 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWRSRLAQ 64 +L R Y E ++++ ++ GR R ++ ILQ + + + Sbjct: 3 RGYVLHHRPYRESSVLVNLLVDGIGRVDVVARTGSGKRSIKSILQPFQPLIFEFSGKSEL 62 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 +V + A LS G+ L R L + EL+ + + L Sbjct: 63 KT---LTQVEAAAPAVPLSGQSLFAGMYINELLVRTLSVQHNAEELFLIYHQALVGLAAK 119 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 ++ IEL LL+ +GF L++ + + + +G + Sbjct: 120 FCQSQLR-YIELALLRELGFMPSLSRDTQGEP------LVAEDYYQLVPELGFQFVLNSR 172 Query: 185 VLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 ++ ++ + L L+ L + L+ + L R+ F+ Sbjct: 173 ARNAYQGAMLTALNDNQLIDVHFLSAKLLMRSLLKPLLGTKPLLSRQLFVSA 224 >gi|229129575|ref|ZP_04258545.1| DNA repair protein recO [Bacillus cereus BDRD-Cer4] gi|229152498|ref|ZP_04280690.1| DNA repair protein recO [Bacillus cereus m1550] gi|228631106|gb|EEK87743.1| DNA repair protein recO [Bacillus cereus m1550] gi|228653892|gb|EEL09760.1| DNA repair protein recO [Bacillus cereus BDRD-Cer4] Length = 252 Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 65/179 (36%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + I++ YGE N I+ + +R+ G+ R + + + + + ++ Sbjct: 5 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGSKKPKSRLASVSQLMTHGHFLI 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG + + S ++ I + +++ L++ML L+ Sbjct: 65 QMGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQTLH 124 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + +L +G C + D + S + GG +C Sbjct: 125 YMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAEQ 183 >gi|30022376|ref|NP_834007.1| DNA repair protein RecO [Bacillus cereus ATCC 14579] gi|218231111|ref|YP_002369105.1| DNA repair protein RecO [Bacillus cereus B4264] gi|42559457|sp|Q818G3|RECO_BACCR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226737856|sp|B7HCS2|RECO_BACC4 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|29897934|gb|AAP11208.1| DNA repair protein recO [Bacillus cereus ATCC 14579] gi|218159068|gb|ACK59060.1| recombination protein O [Bacillus cereus B4264] Length = 248 Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 65/179 (36%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + I++ YGE N I+ + +R+ G+ R + + + + + ++ Sbjct: 1 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGSKKPKSRLASVSQLMTHGHFLI 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG + + S ++ I + +++ L++ML L+ Sbjct: 61 QMGSGLGTLQQGEIISTMKEIREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQTLH 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + +L +G C + D + S + GG +C Sbjct: 121 YMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAEQ 179 >gi|171463194|ref|YP_001797307.1| DNA repair protein RecO [Polynucleobacter necessarius subsp. necessarius STIR1] gi|254764652|sp|B1XTL6|RECO_POLNS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|171192732|gb|ACB43693.1| DNA repair protein RecO [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 244 Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 46/219 (21%), Positives = 80/219 (36%), Gaps = 12/219 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSR 61 + A +L Y E ++IL+V TRQYGR + + ++P+LQ + V+W + Sbjct: 8 DEPAFVLHSIPYKETSLILDVFTRQYGRMALIAKGAKRQHSTLRPVLQRFQPLLVSWSGK 67 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + E + + + L G L +FL + +LYD +N Sbjct: 68 SELRT-LTKSEWVGGMPSLVGD--ALLCGFYLNELLVKFLAREDDYEKLYDRYAETINAL 124 Query: 122 KIPSVI----GKIFVQIELMLLKNIGFGLDLTKCVVTGV---TQDLLWVSPKSGGAVCRS 174 +I Q EL LL+ G+ L +CV Q+ P+ G + Sbjct: 125 SNLEFESKGLEEILRQFELSLLQETGYAAALDRCVENNEAPLAQEQYVYQPERGVRPVQV 184 Query: 175 VGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFL 213 + + D ++L + QL + L Sbjct: 185 DDPGHWPVLTGKSLLAIAISDFSDPETLSESKQLMRFLL 223 >gi|167463436|ref|ZP_02328525.1| DNA repair protein RecO [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383676|ref|ZP_08057427.1| RecO-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321151888|gb|EFX44831.1| RecO-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 250 Score = 98.7 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 72/189 (38%), Gaps = 2/189 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-R 59 M ++ + IIL YGE N I+ V+T+ G+ R + + + L+ + Sbjct: 1 MLYRIEGIILRTVDYGEGNKIITVLTQA-GKVGLMARGAKKVKSRLSAVTQLLIYGEFVF 59 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + +++E + L Y + + + LPE E + L++ L L Sbjct: 60 FKQSGMGTLNHADIIEPYHRLREDIYLSAYASYLVEMVDKMLPEGEANIYLFEQLKSALK 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + E+ +L + G+ + CV G + S GG +C Sbjct: 120 TMEEGKDPQIVVHIFEMAMLASAGYSPVMDVCVSCGSVDGDMMFSSLMGGILCPGCTHKD 179 Query: 180 AEKMLVLPS 188 +K+ + + Sbjct: 180 PQKIRISEN 188 >gi|298369997|ref|ZP_06981313.1| DNA repair protein RecO [Neisseria sp. oral taxon 014 str. F0314] gi|298281457|gb|EFI22946.1| DNA repair protein RecO [Neisseria sp. oral taxon 014 str. F0314] Length = 250 Score = 98.7 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 68/219 (31%), Gaps = 9/219 (4%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 + A +L + E ++ LEV +R YGR R+ + + + +L + +W Sbjct: 6 INHEPAFLLASVPWRESSLRLEVFSRSYGRVALLARSARKRQSELRGVLVPFVPMSASWY 65 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 GL + R +P ELYD L L Sbjct: 66 GSGELKTLH---RAEWLGGWPQPQGRALFSGLYVNELVLRLTAREDPQPELYDALQDVLQ 122 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + E LL ++G+ DL + + AV Sbjct: 123 TLCRQPNHAGALRRFEWKLLDSLGYAPDLQRDGNGDPVDAGRRYLVRPEEAVMPLEQDDV 182 Query: 180 ---AEKMLVLPSFLWKEEQTIDADS-LKSAFQLTDYFLN 214 AE + + L + D+ L+ A Q+T L+ Sbjct: 183 RTAAEVAVDGGTLLQLRQGKFDSGEGLQQALQITRLLLD 221 >gi|332975247|gb|EGK12147.1| recombination protein O [Kingella kingae ATCC 23330] Length = 242 Score = 98.7 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 76/231 (32%), Gaps = 15/231 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + + E ++ LEV ++ YGR R+ ++ + +L + V+W + + Sbjct: 11 FVLSSKPWRETSLWLEVFSQNYGRVALLARSARTRGSELRGVLVPFVPISVSWFGK-EEL 69 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 R E L + + + + + +P +Y L + + Sbjct: 70 KTIHRAEWLGGWAQ--PKNRALFSAMYANELVLKLTVREDPNPAIYQALQQLMQQIAQAT 127 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV---SPKSGGAVCRSVGLPYAEK 182 E LL +G+ D + + + A+ S + + Sbjct: 128 SHTAALRYFEWQLLNALGYAPDTQTDQHGNAIIADAYYLLRAEHAAQAIEPSQAVLSPDS 187 Query: 183 MLVLPSFL-WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENF 232 L+ + L ++ ++ + L SA L L + + R+ Sbjct: 188 CLIQGNVLHALQQSSLQPNQLNSALAL------NRVLIQHHVPHIASRQVL 232 >gi|85712958|ref|ZP_01043997.1| Recombinational DNA repair protein, RecO, RecF pathway [Idiomarina baltica OS145] gi|85693196|gb|EAQ31155.1| Recombinational DNA repair protein, RecO, RecF pathway [Idiomarina baltica OS145] Length = 228 Score = 98.7 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 67/238 (28%), Gaps = 18/238 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNW 58 M A +L Y E +++++ + + GR + + + +LQ + V W Sbjct: 1 MQ---PAFVLHRWDYQETSLLVDCFSLEDGRVRLLAKGAKRKTSSWKGVLQPFIPLNVQW 57 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R + ++ L S G L R LP+ L++ L Sbjct: 58 GGRGELKTLTHAEAMSHNY---ELRSDFLYSGFYINELLQRVLPQHVAVPSLFECYPQLL 114 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIG---FGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 I E LL +G L + T S S Sbjct: 115 QRLADKQPIETTLRWFEWQLLDELGSVFEWPQLEQRNELPETLYFRSYSGFSVDYHDSDC 174 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 ++ + L W + + ++ ++AL I R F Sbjct: 175 VTISRDEAIALGQSDWLN-DPLTESQRYNLKRI-----MRHALAPFIGDKPLRARALF 226 >gi|110834490|ref|YP_693349.1| DNA repair protein RecO [Alcanivorax borkumensis SK2] gi|110647601|emb|CAL17077.1| DNA repair protein RecO [Alcanivorax borkumensis SK2] Length = 225 Score = 98.7 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 70/227 (30%), Gaps = 16/227 (7%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A ++ R + ++ +++ GR VR G+ P+L + V + Sbjct: 11 AWLIHRRPFRNTSLTVDLFLPNLGRVGAVVRGGRK---DPLLAPFTPLWVELKPSGD--- 64 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 LLS G L R L +P ++ + L+ Sbjct: 65 MYSLRACEPRGNRLLLSGKALYCGFYLNELLTRLLHRDDPNPAIWPLYEQALSDLLTDIP 124 Query: 127 IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVL 186 + Q EL L+ IG+G+ L + V + + R+ P V Sbjct: 125 LDITLRQFELAALEEIGYGIALDQDVHGQELEADARYQLNPEQGLVRTEAAP----SYVG 180 Query: 187 PSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 L + K+A + + L ++ + RE F Sbjct: 181 ADLLAICGGNWHPTARKAALNVC-----RQMLAPHLGNRPLKSRELF 222 >gi|294669325|ref|ZP_06734404.1| DNA repair protein RecO [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308735|gb|EFE49978.1| DNA repair protein RecO [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 244 Score = 98.7 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 65/212 (30%), Gaps = 8/212 (3%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ LEV +R+YGR R+ + + + IL + +W Sbjct: 14 FLLNAVPWRESSLRLEVFSRRYGRVALLARSARKRQSELRGILVPFVPIDASWYGNTELK 73 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 GL +++ +P +LYD L + Sbjct: 74 TLH---RAEWLGGWSQPQGRALFSGLYLNELVWKLTAREDPHPKLYDALAEAHREICTRN 130 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + E LL +G+ DL Q ++ A P + Sbjct: 131 NHVAALRRFEWRLLTELGYAPDLLHDADGAAVQAEKQYLLQAEQAPLLLASAPNNANGIT 190 Query: 186 LP---SFLWKEEQTIDADSLKSAFQLTDYFLN 214 + + +SL+ A Q+T L+ Sbjct: 191 ANGSTLLQLHAGRFDNGESLQQALQITRMLLD 222 >gi|217974267|ref|YP_002359018.1| DNA repair protein RecO [Shewanella baltica OS223] gi|304409364|ref|ZP_07390984.1| DNA repair protein RecO [Shewanella baltica OS183] gi|307303722|ref|ZP_07583475.1| DNA repair protein RecO [Shewanella baltica BA175] gi|217499402|gb|ACK47595.1| DNA repair protein RecO [Shewanella baltica OS223] gi|304351882|gb|EFM16280.1| DNA repair protein RecO [Shewanella baltica OS183] gi|306912620|gb|EFN43043.1| DNA repair protein RecO [Shewanella baltica BA175] Length = 236 Score = 98.7 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 78/232 (33%), Gaps = 12/232 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWRSRLAQ 64 +L R Y E ++++ ++ GR R ++ ILQ + + + Sbjct: 3 RGYVLHHRPYRESSVLVNLLVDGIGRVDVVARTGSGKRSIKSILQPFQPLIFEFSGKSEL 62 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 +V + A LS G+ L R L + EL+ + + L Sbjct: 63 KT---LTQVEAAAPAVPLSGQSLFAGMYINELLVRTLSVQHNAEELFLIYHQALVGLAAK 119 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 ++ IEL LL+ +GF L++ + + + +G + Sbjct: 120 FCQSQLR-YIELALLRELGFMPSLSRDTQGEP------LVAEDYYQLVPELGFQFVLNSR 172 Query: 185 VLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 ++ ++ + L L+ L + L+ + L R+ F+ Sbjct: 173 ARNAYQGAMLTALNDNQLTDVHFLSAKLLMRSLLKPLLGTKPLLSRQLFVSA 224 >gi|302878422|ref|YP_003846986.1| DNA repair protein RecO [Gallionella capsiferriformans ES-2] gi|302581211|gb|ADL55222.1| DNA repair protein RecO [Gallionella capsiferriformans ES-2] Length = 241 Score = 98.3 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 58/156 (37%), Gaps = 6/156 (3%) Query: 4 QDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 QD+ A +L + E +++L+V +R+YGR R + R + +L + +R++W Sbjct: 9 QDELAFVLHCHPFRETSLLLDVYSREYGRMAIVARGARRPRSALRGVLMSFQPLRLSWFG 68 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + L + + G L L + +L+D L Sbjct: 69 KGEVRTLH---SAEWQGGQPYLQGTALMCGFYLNELLINLLARDDAHEQLFDYYRATLYR 125 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + E LL+ +G+ L+L +G Sbjct: 126 LAHETDHAATLRCFEKHLLQELGYALNLETEAASGS 161 >gi|260903905|ref|ZP_05912227.1| DNA repair protein RecO [Brevibacterium linens BL2] Length = 242 Score = 98.3 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 70/231 (30%), Gaps = 15/231 (6%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR 59 ++D+ I+L GE + I+ V+TR +G + + + + L+ LV + Sbjct: 3 NYRDEGIVLQGHKLGEADRIVTVLTRSHGLIRAVAKGIRRTKSRFGSRLEPFMLVDLQCH 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + ++ + + R + +L + Sbjct: 63 VGRSLDIVTQVELIEPFARGIGADYDAYSAASVMAETAARITEVEPQSRTHFLLLVSAIR 122 Query: 120 CHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV--- 175 ++ L + G+ L C G S GGAVC + Sbjct: 123 SLCNGEHPPRLALDAYLLRAMSVAGWAPSLLDCAQCGSPGPHRAFSASLGGAVCTTCRPS 182 Query: 176 --GLPYAEKMLVLPSFL---WKEEQTIDADSLKSAFQLTDYF----LNKYA 217 LP + + + + L W+ ++ D +L + L + Sbjct: 183 GAALPDTDALEHMAALLSGDWERAESSDLHDQIDGSKLVSDWVSWHLERNI 233 >gi|119944414|ref|YP_942094.1| DNA repair protein RecO [Psychromonas ingrahamii 37] gi|166221907|sp|A1SSN0|RECO_PSYIN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119863018|gb|ABM02495.1| DNA replication and repair protein RecO [Psychromonas ingrahamii 37] Length = 233 Score = 98.3 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 31/230 (13%), Positives = 75/230 (32%), Gaps = 11/230 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQ 64 A IL R Y E + ++++ + G+ + G+S + Q L++V++ R + Sbjct: 8 AFILHRRPYRETSQLIDLFCQDVGKVSLVYKGGRSSTRMRRGTAQPFTLLQVSYFGRGSL 67 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + + L + L+R L C L++ L Sbjct: 68 KTVKSFEAQTQVVP---LVGQRLFLAMYINELLYRLLQAETACDGLFECYQQTLLAIAGA 124 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRSVGLPYAEKM 183 EL L++ +G+G++ ++ + +G + + + + Sbjct: 125 VDPQIALRLFELTLIETLGYGVNFSEDIYSGELIESGYEYQYQHQAGFFAKQAIHKQHDV 184 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 L ++ ++ + + + AL + + R F Sbjct: 185 YSGQDILALAQRDFSNQNVLKSAKRFC----RQALANLLGGKPLHSRALF 230 >gi|108760610|ref|YP_631289.1| DNA repair protein RecO [Myxococcus xanthus DK 1622] gi|119361467|sp|Q1D7T4|RECO_MYXXD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|108464490|gb|ABF89675.1| DNA repair protein RecO [Myxococcus xanthus DK 1622] Length = 244 Score = 98.3 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 66/178 (37%), Gaps = 3/178 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR 59 + DDA++L YGE + ++ ++TR++G+ F + + + L+ +RV+ Sbjct: 3 RYDDDALVLSSVDYGESDRLVTLLTREHGKLTAFAAGARKSKRRFAGALEPFMRLRVHIV 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +++ A SL L ++ + EP EL+ +L +L Sbjct: 63 ETRGSTVRLDGTDIVAGFYAAREDLSLIARALYAVELCRELTRDHEPQPELFALLESYLT 122 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLL-WVSPKSGGAVCRSVG 176 + EL L + G C + G GGAVC G Sbjct: 123 RLDAKEAGPTSLLAFELSALAHAGLMPRFDSCSLCGGAPGERPRFDQAHGGAVCEPCG 180 >gi|161511021|ref|NP_980671.2| DNA repair protein RecO [Bacillus cereus ATCC 10987] gi|61215101|sp|Q730N8|RECO_BACC1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 248 Score = 98.3 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 63/179 (35%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + I++ YGE N I+ + +R+ G+ R + + + + + ++ Sbjct: 1 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKXPKSRLASVSQLMTHGHFLI 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG + + S + I + ++ L++ML L+ Sbjct: 61 QMGSGLGTLQQGEIISTMKEFREDIFLTAYASFIXELTDKQXXDKXHNPYLFEMLYQTLH 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + +L +G C + D + S + GG +C Sbjct: 121 YMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAEQ 179 >gi|160874399|ref|YP_001553715.1| DNA repair protein RecO [Shewanella baltica OS195] gi|160859921|gb|ABX48455.1| DNA repair protein RecO [Shewanella baltica OS195] gi|315266634|gb|ADT93487.1| DNA repair protein RecO [Shewanella baltica OS678] Length = 236 Score = 98.3 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 36/232 (15%), Positives = 78/232 (33%), Gaps = 12/232 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWRSRLAQ 64 +L R Y E ++++ ++ GR R ++ ILQ + + + Sbjct: 3 RGYVLHHRPYRESSVLVNLLVDGIGRVDVVARTGSGKRSIKSILQPFQPLIFEFSGKSEL 62 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 ++ + A LS G+ L R L + EL+ + + L Sbjct: 63 KT---LTQIEAAAPAVPLSGQSLFAGMYINELLVRTLSVQHNAEELFLIYHQALVGLAAK 119 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 ++ IEL LL+ +GF L++ + + + +G + Sbjct: 120 FCQSQLR-YIELALLRELGFMPSLSRDTQGEP------LVAEDYYQLVPELGFQFVLNSR 172 Query: 185 VLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 ++ ++ + L L+ L + L+ + L R+ F+ Sbjct: 173 ARNAYQGAMLTALNDNQLTDVHFLSAKLLMRSLLKPLLGTKPLLSRQLFVSA 224 >gi|294501285|ref|YP_003564985.1| DNA repair protein RecO [Bacillus megaterium QM B1551] gi|294351222|gb|ADE71551.1| DNA repair protein RecO [Bacillus megaterium QM B1551] Length = 254 Score = 98.3 bits (243), Expect = 9e-19, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 73/205 (35%), Gaps = 3/205 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + I++ YGE N I+ + +R+ G+ R + + + Sbjct: 1 MFKKCEGIVIRTNDYGESNKIVTIYSRELGKVGLMARGAKKPSSRLASVTQLFTYGYFFI 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +G + EV+ S + Y + + +P L+++L+ ++ Sbjct: 61 QAGSGMGTLHQGEVISSMRSIREDIFTTAYASYILELTDKATENNKPNPFLFELLHQTIH 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV--GL 177 + E+ +L +G L +C V + S + GG +C Sbjct: 121 YMNEEYDAEILTFIYEMKMLNVLGLHPTLNECAVCHQGEGTFHFSIREGGFICHRCLEKD 180 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSL 202 PY K+ + L + ID L Sbjct: 181 PYHLKISPMTVKLLRLFYYIDLKRL 205 >gi|42739353|gb|AAS43279.1| recombination protein O [Bacillus cereus ATCC 10987] Length = 257 Score = 98.3 bits (243), Expect = 9e-19, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 63/179 (35%), Gaps = 1/179 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + I++ YGE N I+ + +R+ G+ R + + + + + ++ Sbjct: 10 MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKXPKSRLASVSQLMTHGHFLI 69 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNIFLN 119 ++ LG + + S + I + ++ L++ML L+ Sbjct: 70 QMGSGLGTLQQGEIISTMKEFREDIFLTAYASFIXELTDKQXXDKXHNPYLFEMLYQTLH 129 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + +L +G C + D + S + GG +C Sbjct: 130 YMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETDFVAFSVREGGFLCSRHAEQ 188 >gi|40063416|gb|AAR38227.1| DNA repair protein RecO [uncultured marine bacterium 580] Length = 236 Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 74/231 (32%), Gaps = 13/231 (5%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++I+E+ ++ +GR + + + + +LQ+ + +W Sbjct: 14 YVLHTYPFKETSLIVEIFSKAFGRVSLVAKGARRPKSALRGMLQSFQALEASWSGIGELK 73 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + + + G L R LP+ + L+D + + Sbjct: 74 TLHGIDWCDQYLP---MEGNSLICGFYLNELLLRLLPKEDNYESLFDFYHTTMENLSQGV 130 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 IG + EL LL +G+ + L + ++ + K++ Sbjct: 131 NIGVTLRRFELKLLLELGYEVVLKVDANANEIKADKTYYYEAEQGALEKFRTEKSIKVIG 190 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYAL--QHNIIHCHLLRENFLG 234 A + + L FL Y L + ++ FL Sbjct: 191 QTLIDMGNNNFDSATTELQSKNLMR-FLINYYLGDKPLN-----SKQLFLN 235 >gi|161511220|ref|NP_826805.2| DNA repair protein RecO [Streptomyces avermitilis MA-4680] gi|119370512|sp|Q82BS6|RECO_STRAW RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 248 Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 83/211 (39%), Gaps = 14/211 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V V + S Sbjct: 4 FRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFS 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 R ++ +G + E + + +++ +++ + E + Y + Sbjct: 64 RGSELIGRGLPLCTQSETIAPYGGAIVTDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + ++ LL+++ G+ + C G+ + S +GG+ Sbjct: 124 LVGGLRTLARGEHEPHLV--LDAFLLRSLAVNGYAPSFSNCAKCGMPGPNRFFSVAAGGS 181 Query: 171 VCRSVGLPYAEKMLVLPSFLWKEEQTIDADS 201 VC +P + L T D ++ Sbjct: 182 VCVDCRVPGSVVPSAQALVLLGALLTGDWET 212 >gi|29609289|dbj|BAC73340.1| putative DNA recombination and repair protein [Streptomyces avermitilis MA-4680] Length = 251 Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 83/211 (39%), Gaps = 14/211 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V V + S Sbjct: 7 FRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFS 66 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 R ++ +G + E + + +++ +++ + E + Y + Sbjct: 67 RGSELIGRGLPLCTQSETIAPYGGAIVTDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 126 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + ++ LL+++ G+ + C G+ + S +GG+ Sbjct: 127 LVGGLRTLARGEHEPHLV--LDAFLLRSLAVNGYAPSFSNCAKCGMPGPNRFFSVAAGGS 184 Query: 171 VCRSVGLPYAEKMLVLPSFLWKEEQTIDADS 201 VC +P + L T D ++ Sbjct: 185 VCVDCRVPGSVVPSAQALVLLGALLTGDWET 215 >gi|261380742|ref|ZP_05985315.1| DNA repair protein RecO [Neisseria subflava NJ9703] gi|284796460|gb|EFC51807.1| DNA repair protein RecO [Neisseria subflava NJ9703] Length = 247 Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 68/233 (29%), Gaps = 16/233 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L V +W Sbjct: 13 FLLASAPWRESSLWVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASWYGSQELK 72 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 GL + + +P ELYD+L + + Sbjct: 73 TLH---RAEWIGGWPQPQGRALFSGLYVNELMLKLTVREDPLPELYDVLAKTMKTICCEA 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + E LL +GF DL AV + Sbjct: 130 NHIATLRRFEWSLLTRLGFAPDLFHDGNGNEINGEETYWLTPEEAVVPLAEADRFHALNK 189 Query: 186 LPSFL------WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENF 232 + L +E + +SL A ++T ++ L I R+ Sbjct: 190 GVAVLGATLIDLREGSFVHQESLGQALKVTRLLIDN--LLPEGI---KSRQVL 237 >gi|127511989|ref|YP_001093186.1| DNA repair protein RecO [Shewanella loihica PV-4] gi|126637284|gb|ABO22927.1| DNA repair protein RecO [Shewanella loihica PV-4] Length = 231 Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 66/231 (28%), Gaps = 13/231 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWRSRLAQ 64 +L R Y E ++++ ++ GR R ++ ILQ + R + Sbjct: 3 RGYVLHTRPYRESSVLVNLLVDGLGRVDAVARLGSGKTSIKSILQPFQPLLFQLSGRSSL 62 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + A LS + G L R L + + + L Sbjct: 63 KSLYQVEA---ASPAVPLSGNDSFAGFYLNELLVRCLSVEHGAEQFFFTYHKTLMAMAAA 119 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 ++ EL LLK +G L + + + S ++G Sbjct: 120 FSEAQLRQ-FELSLLKELGVMPSLNLDIEGSPIETDFYYRLLSEEGFSTALGPKPNHFSG 178 Query: 185 VLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLG 234 + L EE + K A L + L + R FL Sbjct: 179 EMLRAL--EEDRLTEADFKQAK-----LLMRQLLSPLLGDKPLKSRALFLK 222 >gi|302545505|ref|ZP_07297847.1| DNA repair protein RecO [Streptomyces hygroscopicus ATCC 53653] gi|302463123|gb|EFL26216.1| DNA repair protein RecO [Streptomyces himastatinicus ATCC 53653] Length = 248 Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 76/190 (40%), Gaps = 14/190 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V V + + Sbjct: 4 FRDDGIVLRTQKLGEADRIITLLTRNHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 R + +G + E + + +++ +++ + E + Y + Sbjct: 64 RGGELIGRGLPLCTQSETIAPYGGGIVTDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + ++ LL+++ G+ C G+ + S +GGA Sbjct: 124 LVGGLRTLASGEHEPHL--ILDAFLLRSLAVNGYAPSFDDCAKCGMPGPNRFFSVGAGGA 181 Query: 171 VCRSVGLPYA 180 +C +P + Sbjct: 182 ICGECRVPGS 191 >gi|295706632|ref|YP_003599707.1| DNA repair protein RecO [Bacillus megaterium DSM 319] gi|294804291|gb|ADF41357.1| DNA repair protein RecO [Bacillus megaterium DSM 319] Length = 254 Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 72/205 (35%), Gaps = 3/205 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + + I++ YGE N I+ + +R+ G+ R + + + Sbjct: 1 MFKKCEGIVIRTNDYGESNKIVTIYSRELGKVGLMARGAKKPSSRLASVTQLFTYGYFFI 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +G + EV+ S + Y + + +P L+++L ++ Sbjct: 61 QAGSGMGTLHQGEVISSMRSIREDIFTTAYASYILELTDKATENNKPNPFLFELLYQTIH 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV--GL 177 + E+ +L +G L +C V + S + GG +C Sbjct: 121 YMNEEYDAEILTFIYEMKMLNVLGLHPTLNECAVCHRGEGTFHFSIREGGFICHRCLEKD 180 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSL 202 PY K+ + L + ID L Sbjct: 181 PYHLKISPMTVKLLRLFYYIDLKRL 205 >gi|237746714|ref|ZP_04577194.1| RecO DNA repair protein [Oxalobacter formigenes HOxBLS] gi|229378065|gb|EEO28156.1| RecO DNA repair protein [Oxalobacter formigenes HOxBLS] Length = 277 Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 72/234 (30%), Gaps = 12/234 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRLA 63 +L Y E ++++EV TR YGR + + R++ +LQ + + W + Sbjct: 49 PGFVLHSYVYRESSLVVEVFTRDYGRVALVAKGAKRPTSRLRGVLQTFQPLSIGWSGKSE 108 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L +S LYG L + L +P L++ L Sbjct: 109 LRT---LTSAEWVGGMIPLENSALLYGFYLNELLLKLLAREDPHQGLFEHYVRALARLAT 165 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRSVGLPYAEK 182 + EL LLK G D + + + + A + Sbjct: 166 AESAQTVLRIFELALLKETGVASDFSVNIQDRSPVEPDGIYVVDPESGPRPATLGDTAPR 225 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 + E D + + L ++ L H++ L R+ + Sbjct: 226 VSGKTLLDMVREDYADPQTQLQSKH-----LMRFLLAHHLDGVPLQTRKILIDL 274 >gi|254429213|ref|ZP_05042920.1| DNA repair protein RecO [Alcanivorax sp. DG881] gi|196195382|gb|EDX90341.1| DNA repair protein RecO [Alcanivorax sp. DG881] Length = 225 Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 70/230 (30%), Gaps = 16/230 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A ++ R + ++ +++ GR VR G+ P+L + V + Sbjct: 11 AWLIHRRPFRNTSLTVDLFLPALGRIGAVVRGGRK---DPLLAPFTPLWVALKPSGE--- 64 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 +L+ G L R L +P ++ + L+ + + Sbjct: 65 MYSLRACEPRGNRLMLTGKALYCGFYLNELLTRLLHRDDPNPSVWPLYEQALSDLQTQTP 124 Query: 127 IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVL 186 Q EL +L+ IG+G+ L + V + Sbjct: 125 FDITLRQFELAVLEQIGYGIALDQDVHGHGLDPEALYQLNPEQGL----AKTETGGGYAG 180 Query: 187 PSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 L + S ++A L ++ L ++ + RE F K Sbjct: 181 ADLLAIAQGDWHPASRRAALSLC-----RHLLAPHLGNRPLKSRELFREK 225 >gi|170718281|ref|YP_001785298.1| DNA repair protein RecO [Haemophilus somnus 2336] gi|168826410|gb|ACA31781.1| DNA repair protein RecO [Haemophilus somnus 2336] Length = 217 Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 71/221 (32%), Gaps = 10/221 (4%) Query: 20 IILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQNLGEFRFEVLESH 77 +++E+ T ++GR + ++ R + +LQ + +NW R + Sbjct: 1 MLVELFTEEHGRLTVLAKGARAKRSAWKSLLQPFTPLLLNWSGRGELK---ILIKAEAIS 57 Query: 78 CAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK-IPSVIGKIFVQIEL 136 L ++ G + R L +L+ L P I K E Sbjct: 58 LTLPLQTTALYSGFYVNELIARLLAPETAYPDLFQYYLQCLTALASSPQEIEKSLRTFEF 117 Query: 137 MLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQT 196 LL+ +G+ +D C +G D + + ++ + Sbjct: 118 QLLEVLGYAVDFCHCAGSGKPVDEKMTYRYREEKGFIASLIKDNLTFYGRELLAFERREF 177 Query: 197 IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 +D L++A + + L Y RE F +L Sbjct: 178 VDKTVLQAAKRFSRIALKYYL---GNKPL-KSRELFTQNIL 214 >gi|315645985|ref|ZP_07899106.1| DNA repair protein RecO [Paenibacillus vortex V453] gi|315278746|gb|EFU42060.1| DNA repair protein RecO [Paenibacillus vortex V453] Length = 262 Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 58/159 (36%), Gaps = 2/159 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M ++ + I++ YGE N I+ + T++ G+ VR + + + + Q + Sbjct: 12 MLYRAEGIVIRSMDYGEGNKIITLCTKESGKVGVLVRGAKKVKSRHAALTQLFTYGEYVF 71 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 E++ESH Y + L R L + E + L + Sbjct: 72 FRNGTGLGNLNAGEIMESHHRLREDLVKAAYASYACELLDRVLQDEETGAFWFHQLKACM 131 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + I E+ +L+ G+G +L C+ T Sbjct: 132 EALQEDKDPQIIINLYEMKILQAAGYGPELDVCISCNQT 170 >gi|311031642|ref|ZP_07709732.1| DNA repair protein RecO [Bacillus sp. m3-13] Length = 258 Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 75/207 (36%), Gaps = 3/207 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + + I++ +YGE N I+ + +++ G+ R + + + Sbjct: 1 MLHKCEGIVIRTNAYGENNKIVTIYSKELGKVGVMARGANKPSSRFTAVSQLFSHATFVF 60 Query: 61 RLAQNLGEFRFEVL-ESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + LG + + +S + L Y + + R E + LYD+L L+ Sbjct: 61 QRSTGLGSLQQGEIMDSMRSIREDIFLTAYASFIVELMDRTTDEGKRNPALYDLLYQVLH 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV--GL 177 + E+ + IG +L +C G T+ S K GG +C Sbjct: 121 YINDGFDAEILTFIFEMKMCDVIGITPELNRCASCGATEGSFAFSIKEGGFLCNRCFHKD 180 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKS 204 PY K+ L + D + + + Sbjct: 181 PYLIKVSPATLRLLRTFYYYDLNRIGN 207 >gi|88608141|ref|YP_506346.1| putative DNA repair protein RecO [Neorickettsia sennetsu str. Miyayama] gi|88600310|gb|ABD45778.1| putative DNA repair protein RecO [Neorickettsia sennetsu str. Miyayama] Length = 237 Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 8/206 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+++ I+L + E + + T+ YG G + + GN+V W Sbjct: 1 MQWENEGIVLSNKGLVENKAVTTLFTKDYGLKRGLC------SRKTTIDVGNVVYCRWSG 54 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNIFLN 119 RL LG FR EV E L + L L ++ L + LPE EP E+Y L Sbjct: 55 RLEVQLGYFRVEVKEIISPFLFTDYKKLKLLNAVLSILLKVLPENEPQKEIYKTFIQLLQ 114 Query: 120 CHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 K ++ ++L +L+ +GF LDL++C VTG T+DL ++SPK+G AV ++VG Sbjct: 115 AFKSNTLCYYRQYIEMDLSILQYLGFQLDLSRCAVTGETKDLFYISPKTGRAVTKAVGEA 174 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKS 204 Y +K+L+LP L+K + + + Sbjct: 175 YKDKLLLLPPSLYKIANGLSIEEISQ 200 >gi|226311655|ref|YP_002771549.1| DNA repair protein [Brevibacillus brevis NBRC 100599] gi|254790514|sp|C0ZB86|RECO_BREBN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226094603|dbj|BAH43045.1| DNA repair protein [Brevibacillus brevis NBRC 100599] Length = 257 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 61/178 (34%), Gaps = 3/178 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + + I++ YGE + ++ + TR+ G+ R + + + + + Sbjct: 1 MLVKWEGIVIRSVDYGESSKVVTMFTRENGKLGVMARGAKKTKSRLAAVSQLFSHSYYLC 60 Query: 61 RLAQNLGEFRF---EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + G ++L+S S + Y L R EREP L+ +L Sbjct: 61 KAGPGTGMPDLSQGDMLDSFRDMRQSLTATAYAAYIAELLDRLTQEREPNPYLFQLLLHT 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + E +L G LT C G ++ +S GG +C Sbjct: 121 FRHLDEGRDAEILCRIFETKMLIVAGISPQLTACANCGEQREPYAISVGQGGLLCPVC 178 >gi|303257005|ref|ZP_07343019.1| DNA repair protein RecO [Burkholderiales bacterium 1_1_47] gi|302860496|gb|EFL83573.1| DNA repair protein RecO [Burkholderiales bacterium 1_1_47] Length = 235 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 6/145 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSR 61 Q A +L + E ++I+E TR YGR R + + + +L + V++ + Sbjct: 14 QQPAFVLHTYPWRETSLIVEFFTRDYGRIPLVARGAKRPMSQYRGLLNPFCPLAVSYSGK 73 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 E + ++ + + L R LP EP L+ + L Sbjct: 74 GEVKNLTRC----EWYGTIPMNEKVLMSAFYINELLVRLLPRGEPEPSLFTIYYDTLKKL 129 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGL 146 + E LK +G+ L Sbjct: 130 ALEKDYLVPLRYFERDFLKVLGYAL 154 >gi|329924075|ref|ZP_08279338.1| DNA repair protein RecO [Paenibacillus sp. HGF5] gi|328940914|gb|EGG37222.1| DNA repair protein RecO [Paenibacillus sp. HGF5] Length = 251 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 57/157 (36%), Gaps = 2/157 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M ++ + I++ YGE N I+ + T++ G+ VR + + + + Q + Sbjct: 1 MLYRAEGIVIRSMDYGEGNKIITLCTKESGKVGVLVRGAKKVKSRHAALTQLFTYGEYVF 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 E++ESH Y + L R L + E + L L Sbjct: 61 FRNGTGLGNLNAGEIMESHHGLREDLVKAAYASYACELLDRVLQDEETGAFWFHQLKACL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + I E+ +L+ G+G +L C+ Sbjct: 121 EALQEDKDPQIIINLYEMKILQAAGYGPELDVCISCN 157 >gi|311693677|gb|ADP96550.1| DNA repair protein RecO [marine bacterium HP15] Length = 242 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 25/151 (16%), Positives = 51/151 (33%), Gaps = 5/151 (3%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 Q+ A +L R + E ++++++ + +GR R S + + LQ + V+W Sbjct: 5 ELQEPAYVLHRRPWRETSLMVDLFSLNHGRMTVIARGANSAKSPLKAQLQPFQPLIVDWA 64 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + + GL L R LP +P L+ + Sbjct: 65 GRGDLKTLTQVDVRA---GPTITRTVSLYSGLYLNELLQRILPAADPHPTLFAAYIDAIG 121 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTK 150 + + + EL +G+ + Sbjct: 122 QLSDTRDVEPVLRRFELAFASALGYDFAWDR 152 >gi|222054844|ref|YP_002537206.1| DNA repair protein RecO [Geobacter sp. FRC-32] gi|221564133|gb|ACM20105.1| DNA repair protein RecO [Geobacter sp. FRC-32] Length = 244 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 55/150 (36%), Gaps = 3/150 (2%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLAQN 65 ++LGV Y + + I+ + T + G+ G RN + R + L+ +R+ + Sbjct: 9 VVLGVLDYADADKIVTLFTLENGKVKGLARNAKKSRKRFGGALEPFARLRLQLTLK-EGL 67 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 +V+ S + + + + E E L+ +L +L + Sbjct: 68 STLNGADVINVFPHIRADLSKIANAAYACELVEQLVGEGEQNPRLFRLLTAYLEHLNLTD 127 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 E LLK +G+ +L +C Sbjct: 128 HAPSDRRFFEANLLKVLGYQPELARCASCD 157 >gi|261405618|ref|YP_003241859.1| DNA repair protein RecO [Paenibacillus sp. Y412MC10] gi|261282081|gb|ACX64052.1| DNA repair protein RecO [Paenibacillus sp. Y412MC10] Length = 251 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 57/157 (36%), Gaps = 2/157 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M ++ + I++ YGE N I+ + T++ G+ VR + + + + Q + Sbjct: 1 MLYRAEGIVIRSMDYGEGNKIITLCTKESGKVGVLVRGAKKVKSRHAALTQLFTYGEYVF 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 E++ESH Y + L R L + E + L L Sbjct: 61 FRNGTGLGNLNAGEIMESHHGLREDLVKAAYASYACELLDRVLQDEETGAFWFHQLKACL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + I E+ +L+ G+G +L C+ Sbjct: 121 EALQEDKDPQIIINLYEMKILQAAGYGPELDVCISCN 157 >gi|118594603|ref|ZP_01551950.1| DNA repair protein RecO [Methylophilales bacterium HTCC2181] gi|118440381|gb|EAV47008.1| DNA repair protein RecO [Methylophilales bacterium HTCC2181] Length = 237 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 74/211 (35%), Gaps = 5/211 (2%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 IL + E ++I+E++++++GR + + R + +L ++ W Sbjct: 13 YILHTYPFKETSLIVEMLSKEFGRIAVAAKGARRPRSSLRGMLLPLQPLQATWSGLNELK 72 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + S + + G + R LP+ +P LYD + + Sbjct: 73 TLH---SIEWSDQFLSIEGDALICGFYLNELMMRLLPKDDPHPALYDHYHQAVLALSKNK 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + + EL LL+ +G+ + L + + + GL + ++ Sbjct: 130 GLSVTLRRFELRLLQELGYQVPLNNDIHGRIIDFDKTYIYHADSGPLEGKGLEGSVEISG 189 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 + D + K + QL Y +N Y Sbjct: 190 KTLIDMAADNYQDPLTEKQSKQLMRYLINHY 220 >gi|114320505|ref|YP_742188.1| DNA repair protein RecO [Alkalilimnicola ehrlichii MLHE-1] gi|119361445|sp|Q0A8Y9|RECO_ALHEH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|114226899|gb|ABI56698.1| DNA replication and repair protein RecO [Alkalilimnicola ehrlichii MLHE-1] Length = 247 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 62/180 (34%), Gaps = 8/180 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ-SHRMQPILQAGNLVRVNWRSRLAQ 64 A +L R + E ++I+E+ +R +GR R G+ S R + +L+ + V +W+ R Sbjct: 10 PAWVLHRRPWSESSLIVELFSRDFGRIGAVARGGRNSRRWRGLLEPFSPVLASWQGRGEL 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 G L R L +P EL+ + LN Sbjct: 70 RSLVAAEPDGARPALAGA---ALASGFYLNELLLRLLRRDDPHPELHPLYGDTLNRL--- 123 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 E LL+ +G+GL L + + R +P A + L Sbjct: 124 -PDEAALRGFECRLLEALGYGLLLLEDMGGEPVHGEAHYRYHLEHGPERLAAVPEAGEGL 182 >gi|330999957|ref|ZP_08323655.1| DNA repair protein RecO [Parasutterella excrementihominis YIT 11859] gi|329573364|gb|EGG54976.1| DNA repair protein RecO [Parasutterella excrementihominis YIT 11859] Length = 234 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 6/145 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSR 61 Q A +L + E ++I+E TR YGR R + + + +L + V++ + Sbjct: 13 QQPAFVLHTYPWRETSLIVEFFTRDYGRIPLVARGAKRPMSQYRGLLNPFCPLAVSYSGK 72 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 E + ++ + + L R LP EP L+ + L Sbjct: 73 GEVKNLTRC----EWYGTIPMNEKVLMSAFYINELLVRLLPRGEPEPSLFTIYYDTLKKL 128 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGL 146 + E LK +G+ L Sbjct: 129 ALEKDYLVPLRYFERDFLKVLGYAL 153 >gi|297160638|gb|ADI10350.1| DNA repair protein RecO [Streptomyces bingchenggensis BCW-1] Length = 249 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 78/212 (36%), Gaps = 15/212 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V V + S Sbjct: 4 FRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFS 63 Query: 61 RLAQN------LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YD 112 R + E + + + +++ +++ + E + Y Sbjct: 64 RGGGELVGRGLPLCTQSETIAPYGSAIVTDYARYTAGTAMLETAERFTDHEGEPAMQQYL 123 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGG 169 +L L + ++ LL+++ G+ C G+ + S +GG Sbjct: 124 LLVGALRTLASGEHEPHL--ILDAFLLRSLAVNGYAPSFDNCAKCGMPGPNRFFSVGAGG 181 Query: 170 AVCRSVGLPYAEKMLVLPSFLWKEEQTIDADS 201 +C +P + L T D ++ Sbjct: 182 VICGECRVPGSVVPSAEALMLLGALLTGDWET 213 >gi|197119173|ref|YP_002139600.1| DNA repair protein RecO [Geobacter bemidjiensis Bem] gi|197088533|gb|ACH39804.1| DNA repair protein RecO [Geobacter bemidjiensis Bem] Length = 217 Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 52/146 (35%), Gaps = 1/146 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + +AI+L +GE + I+ T + G+ G R + + + + + + Sbjct: 10 EAEAIVLRFTDFGEADRIVTFFTLEQGKLQGVARGAKRSKKRFAGALEQFAHLKLQLQQG 69 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLNCHK 122 +L + S + + + L L P+ EP L+ +L +L Sbjct: 70 NSLATLSSADIVSIFPGIRGDLVKIGCAAYACELVERLTPDEEPAPRLFRLLYCYLERLN 129 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDL 148 + LLK +G+ DL Sbjct: 130 EAPPSPSDRRFFAVNLLKILGYQPDL 155 >gi|268315979|ref|YP_003289698.1| DNA repair protein RecO [Rhodothermus marinus DSM 4252] gi|262333513|gb|ACY47310.1| DNA repair protein RecO [Rhodothermus marinus DSM 4252] Length = 254 Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 54/154 (35%), Gaps = 4/154 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M + +AI+L YGE ++I + TR GR + + R LQ + ++V + Sbjct: 1 MIVRTEAIVLRTLPYGETSLIASLFTRAKGRLSMMAKGARLPGSRFGGTLQPPSCLQVVF 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKL-LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 R + L + +L L+ + LP EP E ++ Sbjct: 61 YYRPTRELQTLSESSFAQYLPELGRDLEKLTLSLRMVELAHALLPPEEPMPEFFETFWQV 120 Query: 118 LNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTK 150 L + +L L +GF + + Sbjct: 121 LARLDATPTRAWNLLPWFQLRLAAALGFAPRIER 154 >gi|120599800|ref|YP_964374.1| DNA repair protein RecO [Shewanella sp. W3-18-1] gi|120559893|gb|ABM25820.1| DNA repair protein RecO [Shewanella sp. W3-18-1] gi|319425563|gb|ADV53637.1| DNA repair protein RecO [Shewanella putrefaciens 200] Length = 236 Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 35/232 (15%), Positives = 71/232 (30%), Gaps = 12/232 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWRSRLAQ 64 +L R Y E ++++ ++ GR R ++ ILQ + + + Sbjct: 3 RGYVLHHRPYRESSVLVNLLVDGIGRVDVVARTGSGKRSIKSILQPFQPLIFEFSGKSEL 62 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 ++ + A LS G+ L R L + L+ + + L Sbjct: 63 KT---LTQIEAAAPAVPLSGQSLFAGMYINELLVRTLSVQHHAEALFLIYHRALVGLAAK 119 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 ++ IEL LL+ +G L++ + + A Sbjct: 120 FCQSQLR-YIELALLQELGAMPSLSRDTQGEPLVPEDYYQLVPELGFQFVLN-SRARNAY 177 Query: 185 VLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 + + + SA +L L + L + L R+ F+ Sbjct: 178 QGAMLMALNDNQLTEAQFLSA-KL----LMRSLLTPLLGTKPLLSRQLFVSS 224 >gi|257093155|ref|YP_003166796.1| DNA repair protein RecO [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045679|gb|ACV34867.1| DNA repair protein RecO [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 238 Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 70/231 (30%), Gaps = 13/231 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L Y E ++I++V +R +GR R + R + +L A + + W R Sbjct: 11 PAFVLHAYPYSETSLIIDVFSRDFGRVALLARGARRPRSVLRGVLLAFQPLELAWAGRGE 70 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + LL+ G L LP + L+ + L Sbjct: 71 VQTLM---KAEWQGGQPLLAGKSLFCGYYLNELLMNLLPREDAHARLFAVYAETLRRFAD 127 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA-VCRSVGLPYAEK 182 + + E LL+ +G+GL L + + + V A Sbjct: 128 GAQEADLRC-FERALLQELGYGLLLETDAEGVAVEADGDYAYEIERGPVRLQRPGGSALS 186 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN-IIHCHLLRENF 232 + E D SL A Q L + + H R F Sbjct: 187 VSGRTLIDLAREDFSDPRSLSEAKQ-----LMRTLIGHYTGGRSLASRRIF 232 >gi|167037773|ref|YP_001665351.1| DNA repair protein RecO [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256751967|ref|ZP_05492837.1| DNA repair protein RecO [Thermoanaerobacter ethanolicus CCSD1] gi|320116188|ref|YP_004186347.1| DNA repair protein RecO [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|238687665|sp|B0KA52|RECO_THEP3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166856607|gb|ABY95015.1| DNA repair protein RecO [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256749172|gb|EEU62206.1| DNA repair protein RecO [Thermoanaerobacter ethanolicus CCSD1] gi|319929279|gb|ADV79964.1| DNA repair protein RecO [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 248 Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 68/177 (38%), Gaps = 2/177 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RSRL 62 + +AI+L GE + I + T+ YG+ + + + + + + N+ Sbjct: 5 KTEAIVLKNNLIGETDKIATLFTKSYGKLQAVAKGARRSKSRFVNAIRPFIVANYVIFEG 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 ++E++E+H F + + L E + LY L L Sbjct: 65 KNYYYIDQWELIEAHRNIEKDLVKFSVASYIAETINKILEENQKSERLYLFLKHSLKAVD 124 Query: 123 IPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + IF+ L L+ +G+ L CVV G ++L + S GGAVC + Sbjct: 125 ELQIDPLIFISSYNLKLVSLLGYMPQLDNCVVCGKRENLKYFSNSCGGAVCINCKNK 181 >gi|325266693|ref|ZP_08133370.1| recombination protein O [Kingella denitrificans ATCC 33394] gi|324982136|gb|EGC17771.1| recombination protein O [Kingella denitrificans ATCC 33394] Length = 252 Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 33/220 (15%), Positives = 64/220 (29%), Gaps = 11/220 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L + E ++ LEV +R YGR R+ ++ + IL + ++W + Sbjct: 10 PAFLLASSPWRENSLRLEVFSRDYGRVALLARSARARGSELRGILMPFVPLSISWFGKEE 69 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + L L + L + +P LY L + Sbjct: 70 LKTLH---RAEWVGGWQQPKNLLLFSALYANEILLKLTAREDPHPNLYHALAQLMQHFGT 126 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 E LL +G+ + + A R + Sbjct: 127 GQHHLAPLRHFEWQLLHELGYAPSAQHDRQQQPIETHANYLMRPETAAERMAEAESSLHS 186 Query: 184 LVLPSFLWK------EEQTIDADSLKSAFQLTDYFLNKYA 217 + + E ++ L++A L F+ Y Sbjct: 187 VPNSCIISGDVLQALETSSLQPHQLQAALALNRLFIQHYL 226 >gi|225024982|ref|ZP_03714174.1| hypothetical protein EIKCOROL_01871 [Eikenella corrodens ATCC 23834] gi|224942212|gb|EEG23421.1| hypothetical protein EIKCOROL_01871 [Eikenella corrodens ATCC 23834] Length = 246 Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 67/219 (30%), Gaps = 13/219 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L + E +++ E+ +R YGR R+ + + + +L V+V W + Sbjct: 11 PAFLLSATPWRETSLLAELFSRDYGRVAVVARSARKRQSELRGVLVPFVPVQVAWYGKEE 70 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L GL + + +P LY+ L + Sbjct: 71 LKTLH---RAEWLGGWPQPQGRALLSGLYVNELVQKLTAREDPQPALYEALRQVMRTLCT 127 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + + E LL G+ DL K + + AV Sbjct: 128 EPNHAAVLRRFEWTLLTLAGYAPDLQKDSAGCPVEADRQYWLQPEHAVLPLEQRHSLTPA 187 Query: 184 LVLP--------SFLWKEEQTIDADSLKSAFQLTDYFLN 214 V P + + D +L+ A ++T L+ Sbjct: 188 EVQPGVAVDGDVLIQLQNGEFTDTSALQQARRITRLLLD 226 >gi|213420940|ref|ZP_03354006.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 222 Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 70/216 (32%), Gaps = 12/216 (5%) Query: 21 ILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHC 78 +L+V T + GR + +S R + LQ + + + R Sbjct: 1 MLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLRYSGRGEVKTLR---SAEAVSL 57 Query: 79 AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS-VIGKIFVQIELM 137 A LS GL L R L EL+ + + + EL Sbjct: 58 ALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLNCIQALAGTTGSPEPALRRFELA 117 Query: 138 LLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTI 197 LL ++G+G++ T C +G D + + + + Sbjct: 118 LLGHLGYGVNFTHCAGSGERVDDTMTYRYREEKGFFASVVIDNNTFTGRHLKALEAREFP 177 Query: 198 DADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 D D+L++A + T + AL+ + RE F Sbjct: 178 DVDTLRAAKRFT-----RMALKPYLGGKPLKSRELF 208 >gi|319943507|ref|ZP_08017789.1| recombination protein O [Lautropia mirabilis ATCC 51599] gi|319743322|gb|EFV95727.1| recombination protein O [Lautropia mirabilis ATCC 51599] Length = 234 Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 53/177 (29%), Gaps = 5/177 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSR 61 + +L +Y E ++I+++ R+ GR + + +P+L + R Sbjct: 7 DEPGFVLHSHAYRETSLIVDLFLRERGRVSAVAKGARRPTSALRPVLLQFQPIEFRLSGR 66 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + L+ + R L +P +L+D L Sbjct: 67 NELRT---LTRAEWQGGMAVPAGRALLFAFYLNELVMRLLAREDPHPQLFDAYADALYQL 123 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 +I + E +LL IG+ DL + G P Sbjct: 124 GEQGADERILRRFEWLLLTEIGYAPDLACDHRGLPLEPQRNYRMDGGQWFATQGEDP 180 >gi|161502269|ref|YP_001569381.1| hypothetical protein SARI_00299 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863616|gb|ABX20239.1| hypothetical protein SARI_00299 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 222 Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 71/216 (32%), Gaps = 12/216 (5%) Query: 21 ILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHC 78 +L+V T + GR + +S R + LQ + + + R Sbjct: 1 MLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLRYSGRGEVKTLR---SAEAVSL 57 Query: 79 AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS-VIGKIFVQIELM 137 A L+ GL L R L EL+ + + + + EL Sbjct: 58 ALPLNGITLYSGLYINELLSRVLEYETRFSELFFDYLNCIQALAGTTGSPEPVLRRFELA 117 Query: 138 LLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTI 197 LL ++G+G++ T C +G D + + + + Sbjct: 118 LLGHLGYGVNFTHCAGSGEQVDDTMTYRYREEKGFIASVVIDNNTFTGRHLKALEAREFP 177 Query: 198 DADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 D D+L++A + T + AL+ + RE F Sbjct: 178 DVDTLRAAKRFT-----RMALKPYLGGKPLKSRELF 208 >gi|302551286|ref|ZP_07303628.1| DNA repair protein RecO [Streptomyces viridochromogenes DSM 40736] gi|302468904|gb|EFL31997.1| DNA repair protein RecO [Streptomyces viridochromogenes DSM 40736] Length = 248 Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 82/211 (38%), Gaps = 14/211 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V V + + Sbjct: 4 FRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 + ++ +G + E + + ++S ++ + E + Y + Sbjct: 64 KGSELVGRGLPLCTQSETIAPYGGGIVSDYARYTAGTVMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + ++ LL+++ G+ T C G+ + S SGG+ Sbjct: 124 LVGGLRTLARGEHAPHLV--LDAFLLRSLAVNGYAPSFTDCAKCGMPGPNRFFSVASGGS 181 Query: 171 VCRSVGLPYAEKMLVLPSFLWKEEQTIDADS 201 VC +P + L T D ++ Sbjct: 182 VCVDCRVPGSVVPSPQALELLGALLTGDWET 212 >gi|322420171|ref|YP_004199394.1| DNA repair protein RecO [Geobacter sp. M18] gi|320126558|gb|ADW14118.1| DNA repair protein RecO [Geobacter sp. M18] Length = 212 Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 71/207 (34%), Gaps = 7/207 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR 61 + + I+L + +GE + I+ + T + G+ G R + R + L+ +++ Sbjct: 5 EAEGIVLRLTDFGEADRIVTMFTLEQGKLQGVARGAKRSRKRFAGALEPFAHLKLQLHL- 63 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 +++ + + + R PE EP L+ +L +L Sbjct: 64 GTGLATLSSADIVGIFPGIRADLTKIGCAAYACELVERLTPEDEPSPRLFRLLYCYLERL 123 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 + LLK +G+ DL ++ T LL + ++G + + E Sbjct: 124 NEAPASPSDRRFFAVNLLKILGYQPDLQLRAISEETATLLARAMRTGRF----GAIVFPE 179 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQL 208 +L L + D + Sbjct: 180 PLLSEADLLLNPAIDLHLDRELKSLAF 206 >gi|152999780|ref|YP_001365461.1| DNA repair protein RecO [Shewanella baltica OS185] gi|151364398|gb|ABS07398.1| DNA repair protein RecO [Shewanella baltica OS185] Length = 236 Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 78/232 (33%), Gaps = 12/232 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWRSRLAQ 64 +L R Y E ++++ ++ GR R ++ ILQ + + + Sbjct: 3 RGYVLHHRPYRESSVLVNLLVDGIGRVDVVSRTGSGKRSIKSILQPFQPLIFEFSGKSEL 62 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 +V + A LS G+ L R L + EL+ + + L Sbjct: 63 KT---LTQVEAAAPAVPLSGQSLFAGMYINELLVRTLSVQHNAEELFLIYHQALVGLAAK 119 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 ++ IEL LL+ +GF L++ + + + +G + Sbjct: 120 FCQSQLR-YIELALLRELGFMPSLSRDTQGEP------LVAEDYYQLVPELGFQFVLNSR 172 Query: 185 VLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 ++ ++ + L L+ L + L+ + L R+ F+ Sbjct: 173 ARNAYQGAMLTALNDNQLTDVHFLSAKLLMRSLLKPLLGTKPLLSRQLFVSA 224 >gi|157144499|ref|YP_001451818.1| hypothetical protein CKO_00217 [Citrobacter koseri ATCC BAA-895] gi|157081704|gb|ABV11382.1| hypothetical protein CKO_00217 [Citrobacter koseri ATCC BAA-895] Length = 225 Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 69/216 (31%), Gaps = 12/216 (5%) Query: 21 ILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHC 78 +L+V T + GR + +S R + LQ + + + R Sbjct: 1 MLDVFTEESGRVRLVAKGARSKRSSLKGALQPFTPLLLRFGGRGEVKTLR---SAEAVSL 57 Query: 79 AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS-VIGKIFVQIELM 137 A LS GL L R L EL+ + + + EL Sbjct: 58 ALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLNCIQSLAGATGSPEPALRRFELA 117 Query: 138 LLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTI 197 LL ++G+G+D C +G T D + + + Sbjct: 118 LLGHLGYGVDFLHCAGSGETVDDTMTYRYREEKGFMASVVIDNSTFTGRHLKALDAREFP 177 Query: 198 DADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 D D+L++A + T + AL+ + RE F Sbjct: 178 DVDTLRAAKRFT-----RMALKPYLGGKPLKSRELF 208 >gi|319638209|ref|ZP_07992972.1| DNA repair protein [Neisseria mucosa C102] gi|317400482|gb|EFV81140.1| DNA repair protein [Neisseria mucosa C102] Length = 247 Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 66/233 (28%), Gaps = 16/233 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L V +W Sbjct: 13 FLLASAPWRESSLWVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASWYGSQELK 72 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 GL + + +P ELYD+L + + Sbjct: 73 TLH---RAEWIGGWPQPQGRALFSGLYVNELMLKLTVREDPLPELYDVLAETMKTICCEA 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + E LL +GF DL AV + Sbjct: 130 NHIAALRRFEWTLLTRLGFAPDLFHDGNGNEINGEETYWLTPEEAVVPLAEADRFHALNK 189 Query: 186 ------LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENF 232 +E + +SL A ++T ++ L I R+ Sbjct: 190 GVAVSGATLIDLREGSFVHQESLGQALKVTRLLIDN--LLPEGI---KSRQVL 237 >gi|253700038|ref|YP_003021227.1| DNA repair protein RecO [Geobacter sp. M21] gi|251774888|gb|ACT17469.1| DNA repair protein RecO [Geobacter sp. M21] Length = 217 Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 53/146 (36%), Gaps = 3/146 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLA 63 +AI+L + +GE + I+ T + G+ G R + + + L+A +++ + Sbjct: 12 EAIVLRLTDFGEADRIVTFFTLEQGKLQGVARGAKRSKKRFAGALEAFAHLKLQLHLGNS 71 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 +++ + + R P+ EP L+ +L +L Sbjct: 72 LPT-LSSADIVSIFPGIRSDLVKIGSAAYACELVERLTPDEEPAPRLFRLLYCYLERLDQ 130 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLT 149 + LLK +G+ DL Sbjct: 131 DPPSASDRRFFAVNLLKILGYQPDLK 156 >gi|119713603|gb|ABL97654.1| DNA repair protein RecO [uncultured marine bacterium EB0_39H12] Length = 241 Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 28/211 (13%), Positives = 74/211 (35%), Gaps = 9/211 (4%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRL 62 + A +L R Y E ++I+E T+ +GR + + + + +L + + V+ + Sbjct: 10 EPAFVLHTRPYQETSLIVEFFTQSFGRINAVAKGAKRPKSPLRSVLTPVSRLSVSLSGKS 69 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + L + + + + + +P ++ FL Sbjct: 70 ELKNLSSAEILDHYP---LSDGASLNSIIYINELITKATEKEDPHKIIFLKYQNFLENIS 126 Query: 123 IPSVIGKIFVQ---IELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVCRSVGLP 178 + + + + E+ LL+ +G+G+DLT+ T ++ Sbjct: 127 KNNNLDNLELLLRDFEMTLLQEMGYGIDLTRDAETNNKLKEDTNYRFDPNIGFTFITAGN 186 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLT 209 + + + E + S+++A ++ Sbjct: 187 RPKISFLGKDIIDFSEGKFEKKSVRAASKII 217 >gi|146292264|ref|YP_001182688.1| DNA repair protein RecO [Shewanella putrefaciens CN-32] gi|145563954|gb|ABP74889.1| DNA repair protein RecO [Shewanella putrefaciens CN-32] Length = 236 Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 35/232 (15%), Positives = 77/232 (33%), Gaps = 12/232 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWRSRLAQ 64 +L R Y E ++++ ++ GR R ++ ILQ + + + Sbjct: 3 RGYVLHHRPYRESSVLVNLLVDGIGRVDVVARTGSGKRSIKSILQPFQPLIFEFSGKSEL 62 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 ++ + A L G+ L R L + L+ + + L Sbjct: 63 KT---LTQIEAAAPAVPLFGQSLFAGMYINELLVRTLSVQHHAEALFLIYHRALVGLAAK 119 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 ++ IEL LL+ +G L++ + + P + +G + Sbjct: 120 FCQSQLR-YIELALLQELGAMPSLSRDTLGEP------LVPDDYYQLVPELGFQFVLNSR 172 Query: 185 VLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 ++ ++ + L A L+ L + L+ + L R+ F+ Sbjct: 173 ARNAYQGAMLMALNDNQLTEAQFLSAKLLMRSLLKPLLGTKPLLSRQLFVNS 224 >gi|326389847|ref|ZP_08211411.1| DNA repair protein RecO [Thermoanaerobacter ethanolicus JW 200] gi|325994115|gb|EGD52543.1| DNA repair protein RecO [Thermoanaerobacter ethanolicus JW 200] Length = 248 Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 69/177 (38%), Gaps = 2/177 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RSRL 62 + +AI+L GE + I + T+ YG+ + + + + + V N+ Sbjct: 5 KTEAIVLKNNLIGETDKIATLFTKSYGKLQAVAKGARRSKSRFVNAIRPFVVANYVIFEG 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 ++E++E+H + F + + L E + LY L L Sbjct: 65 QNYYYIDQWELIEAHKNIEKDLAKFSVASYIAETINKILEENQKSERLYLFLKHSLKAVD 124 Query: 123 IPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + IF+ L L+ +G+ L CVV G ++L + S GGAVC + Sbjct: 125 ELQIDPLIFISSYNLKLVSLLGYMPQLDNCVVCGKRENLKYFSNSCGGAVCINCKNK 181 >gi|225075848|ref|ZP_03719047.1| hypothetical protein NEIFLAOT_00864 [Neisseria flavescens NRL30031/H210] gi|224952794|gb|EEG34003.1| hypothetical protein NEIFLAOT_00864 [Neisseria flavescens NRL30031/H210] Length = 247 Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 68/233 (29%), Gaps = 16/233 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + + ++ +E +R+YGR R+ + + + +L V +W Sbjct: 13 FLLASAPWRDSSLWVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASWYGSQELK 72 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 GL + + +P ELYD+L + + Sbjct: 73 TLH---RAEWIGGWPQPQGRALFSGLYVNELMLKLTVREDPLPELYDVLAETMKTICCEA 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + E LL +GF DL AV + Sbjct: 130 NHIAALRRFEWSLLTRLGFAPDLFHDGNGNEINGEETYWLTPEEAVVPLAEADRFHALNK 189 Query: 186 LPSFL------WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENF 232 + L +E + +SL A ++T ++ L I R+ Sbjct: 190 GVAVLGATLIDLREGSFVHQESLGQALKVTRLLIDN--LLPEGI---KSRQVL 237 >gi|269836984|ref|YP_003319212.1| DNA repair protein RecO [Sphaerobacter thermophilus DSM 20745] gi|269786247|gb|ACZ38390.1| DNA repair protein RecO [Sphaerobacter thermophilus DSM 20745] Length = 276 Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 57/157 (36%), Gaps = 3/157 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++ +A++L R GE + IL + T ++G+ + + ++ L+ + + Sbjct: 33 YRTEAVVLRRRDLGEADRILTLFTARHGKLRVVAKGVRRPQSKLAGHLEPCARTSLLL-A 91 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + ++++ + A + Y L E +P YD L Sbjct: 92 QGRNLDIITQAQLVKPYRALRENEISIAYAGYFADLLDALTVEAQPNPAAYDALVSAFEM 151 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 I EL LL GF +L +C G T Sbjct: 152 LDRGLDPFVIARIFELHLLTVTGFRPELYRCAGCGET 188 >gi|325142930|gb|EGC65289.1| DNA repair protein RecO [Neisseria meningitidis 961-5945] Length = 263 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 72/234 (30%), Gaps = 16/234 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L V +W Sbjct: 12 FLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASWYGSQELK 71 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 GL + + +P ELYD L + + Sbjct: 72 TLH---RAEWIGGWPQPQGRALFSGLYVNELMLKLTVREDPLPELYDALAEVMEAVCCKA 128 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL----PYAE 181 + E LL +G DL + G + AV P+A Sbjct: 129 AYIDDLRRFEWRLLNLLGVAPDLNRDGDGGTIAAGGTYLVRPETAVFPVGKGFAVPPHAA 188 Query: 182 KMLVLPSFLWK--EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 ++ L E A+SL+ A ++T F+ L + R+ Sbjct: 189 GVVAPGQSLIDLREGSFRTAESLQQALKITRLFI--RHLLPEGL---KSRQVLE 237 >gi|56963448|ref|YP_175179.1| DNA repair protein RecO [Bacillus clausii KSM-K16] gi|61214764|sp|Q5WHD7|RECO_BACSK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|56909691|dbj|BAD64218.1| DNA repair protein RecO [Bacillus clausii KSM-K16] Length = 256 Score = 96.0 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 63/191 (32%), Gaps = 2/191 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-R 59 M + DAI+L YGE N I+ + T++ G+ + + + V ++ Sbjct: 1 MLKKQDAIVLKSIDYGETNKIVTLFTKEDGKLAVLAKGAKKPNSRFAAVTQPFVYGSYLY 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + E ++S Y + + ER+P L+D L + L Sbjct: 61 FQGNGLPSLSQGEAVDSFKELQFDIVKSAYAAYITELVDKLTEERKPTFFLFDWLLLALR 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVSPKSGGAVCRSVGLP 178 I +++ +L G +L C D + S G +C + Sbjct: 121 QINTGQDAEIIARIMDMKMLPLAGAKPELDCCACCRSETRDPVAFSVAYAGFLCSNCIHK 180 Query: 179 YAEKMLVLPSF 189 + F Sbjct: 181 DERAFPITLPF 191 >gi|262040301|ref|ZP_06013552.1| DNA repair protein RecO [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330007688|ref|ZP_08306027.1| DNA repair protein RecO [Klebsiella sp. MS 92-3] gi|259042410|gb|EEW43430.1| DNA repair protein RecO [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328535369|gb|EGF61851.1| DNA repair protein RecO [Klebsiella sp. MS 92-3] Length = 225 Score = 96.0 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 68/216 (31%), Gaps = 12/216 (5%) Query: 21 ILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHC 78 +L+V T + GR + +S R + LQ + V + R Sbjct: 1 MLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLVRFGGRGEVKTLR---SAEAVSL 57 Query: 79 AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS-VIGKIFVQIELM 137 A LS GL + R L EL+ + S + EL Sbjct: 58 ALPLSGITLYSGLYVNELISRVLEHETRFSELFFDYLHCIQALAGASGSPEPALRRFELA 117 Query: 138 LLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTI 197 LL ++G+G+D C +G D + + + Sbjct: 118 LLGHLGYGVDFLHCAGSGEPVDDTMTYRYREEKGFIASLVIDNNTFTGHHLKALASREFP 177 Query: 198 DADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 D D+L++A + T + AL+ + RE F Sbjct: 178 DVDTLRAAKRFT-----RIALKPYLGGKPLKSRELF 208 >gi|167039987|ref|YP_001662972.1| DNA repair protein RecO [Thermoanaerobacter sp. X514] gi|300914077|ref|ZP_07131393.1| DNA repair protein RecO [Thermoanaerobacter sp. X561] gi|307724690|ref|YP_003904441.1| DNA repair protein RecO [Thermoanaerobacter sp. X513] gi|238687639|sp|B0K710|RECO_THEPX RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166854227|gb|ABY92636.1| DNA repair protein RecO [Thermoanaerobacter sp. X514] gi|300889012|gb|EFK84158.1| DNA repair protein RecO [Thermoanaerobacter sp. X561] gi|307581751|gb|ADN55150.1| DNA repair protein RecO [Thermoanaerobacter sp. X513] Length = 248 Score = 96.0 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 69/177 (38%), Gaps = 2/177 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RSRL 62 + +AI+L GE + I + T+ YG+ + + + + + V N+ Sbjct: 5 KTEAIVLKNNLIGETDKIATLFTKSYGKLQAVAKGARRSKSRFVNAIRPFVVANYVIFEG 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 ++E++E+H + F + + L E + LY L L Sbjct: 65 QNYYYIDQWELIEAHKNIEKDLAKFSVASYIAETINKILEENQKSERLYLFLKHSLKAVD 124 Query: 123 IPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + IF+ L L+ +G+ L CVV G ++L + S GGAVC + Sbjct: 125 ELQIDPLIFISSYNLKLVSLLGYMPQLDNCVVCGKRENLKYFSNSCGGAVCINCKNK 181 >gi|149374707|ref|ZP_01892481.1| DNA repair protein RecO [Marinobacter algicola DG893] gi|149361410|gb|EDM49860.1| DNA repair protein RecO [Marinobacter algicola DG893] Length = 238 Score = 96.0 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 72/235 (30%), Gaps = 10/235 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNW 58 M Q+ A +L R + E +++++V + GR R G S + + LQ + ++W Sbjct: 1 MQ-QEPAYVLHRRPWRETSLMVDVFSLNAGRVTVVARGGNSAKSPLKAQLQPFQPLLLDW 59 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R L + GL L R LP +P +L+ + Sbjct: 60 TGRSDLKTLTQADVR---SGPSLKRTLSLYSGLYVNELLQRLLPMADPHHQLFAAYIDVI 116 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRSVGL 177 + I + E L +G+ + +G + + Sbjct: 117 AELSEARDVEPILRRFEQSLAAELGYDFVWDQATDSGQPVEAGRLYCYDPEQGILAEPSP 176 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENF 232 + L + L +++ + + L Y LQ R F Sbjct: 177 GARLRNLPGGTLLALANGDLESVECRRIAKRVTRVLVDYLLQ---GKVLHSRSLF 228 >gi|241760492|ref|ZP_04758585.1| DNA repair protein RecO [Neisseria flavescens SK114] gi|241318996|gb|EER55498.1| DNA repair protein RecO [Neisseria flavescens SK114] Length = 247 Score = 96.0 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 68/233 (29%), Gaps = 16/233 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L V +W Sbjct: 13 FLLASAPWRESSLWVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASWYGSQELK 72 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 GL + + +P ELYD+L + + Sbjct: 73 TLH---RAEWIGGWPQPQGRALFSGLYVNELMLKLTVREDPLPELYDVLAETMKTICCEA 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + E LL +GF DL AV + Sbjct: 130 NHIAALRRFEWTLLTRLGFAPDLFHDGNGNEINSDETYWLTPEEAVVHLAEADRFHALNK 189 Query: 186 LPSFL------WKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENF 232 + L +E + +SL A ++T ++ L I R+ Sbjct: 190 GVAVLGATLIDLREGSFVHQESLGQALKVTRLLIDN--LLPEGI---KSRQVL 237 >gi|218768788|ref|YP_002343300.1| DNA repair protein (recombination protein o) [Neisseria meningitidis Z2491] gi|121052796|emb|CAM09142.1| DNA repair protein (recombination protein o) [Neisseria meningitidis Z2491] Length = 264 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 73/234 (31%), Gaps = 16/234 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L LV +W Sbjct: 13 FLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVLVSASWYGSQELK 72 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 GL + + +P ELYD L + + Sbjct: 73 TLH---RAEWIGGWPQPQGRALFSGLYVNELMLKLTVREDPLPELYDALAEVMEAVCCKA 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL----PYAE 181 + E LL +G DL + G + AV P+A Sbjct: 130 AYIDDLRRFEWRLLNLLGVAPDLNRDGDGGTIAAGGTYLVRPETAVFPVGKGFAVPPHAA 189 Query: 182 KMLVLPSFLWK--EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 ++ L E A+SL+ A ++T F+ L + R+ Sbjct: 190 GVVAPGQSLIDLREGSFRTAESLQQALKITRLFI--RHLLPEGL---KSRQVLE 238 >gi|17865561|sp|Q9JT15|RECO_NEIMA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|6274541|gb|AAF06689.1|AF163663_14 putative DNA repair protein homolog RecO [Neisseria meningitidis] Length = 263 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 73/234 (31%), Gaps = 16/234 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L LV +W Sbjct: 12 FLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVLVSASWYGSQELK 71 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 GL + + +P ELYD L + + Sbjct: 72 TLH---RAEWIGGWPQPQGRALFSGLYVNELMLKLTVREDPLPELYDALAEVMEAVCCKA 128 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL----PYAE 181 + E LL +G DL + G + AV P+A Sbjct: 129 AYIDDLRRFEWRLLNLLGVAPDLNRDGDGGTIAAGGTYLVRPETAVFPVGKGFAVPPHAA 188 Query: 182 KMLVLPSFLWK--EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 ++ L E A+SL+ A ++T F+ L + R+ Sbjct: 189 GVVAPGQSLIDLREGSFRTAESLQQALKITRLFI--RHLLPEGL---KSRQVLE 237 >gi|289578135|ref|YP_003476762.1| DNA repair protein RecO [Thermoanaerobacter italicus Ab9] gi|289527848|gb|ADD02200.1| DNA repair protein RecO [Thermoanaerobacter italicus Ab9] Length = 248 Score = 95.6 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 67/177 (37%), Gaps = 2/177 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RSRL 62 + +AI+L S GE + + + T+ YG+ + + + + + + N+ Sbjct: 5 KTEAIVLKNNSIGETDKMATLFTKNYGKLRAVAKGARRSKSRFVNAIRPFMVANYVIFEG 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 ++E++ESH F + + L E + +LY L Sbjct: 65 QNYYYIDQWELIESHKNIEKDLVKFSVASYISETVNKILEENQKSEKLYQFLKHSFKAVD 124 Query: 123 IPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + IF+ L L+ +G+ L C+V G +DL + S GG VC Sbjct: 125 ELQIDPLIFIASYNLKLVSLLGYMPQLDNCIVCGKREDLKYFSNSCGGVVCTICKNK 181 >gi|83589465|ref|YP_429474.1| DNA replication and repair protein RecO [Moorella thermoacetica ATCC 39073] gi|119361465|sp|Q2RKV8|RECO_MOOTA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|83572379|gb|ABC18931.1| DNA replication and repair protein RecO [Moorella thermoacetica ATCC 39073] Length = 267 Score = 95.6 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 68/218 (31%), Gaps = 16/218 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 +Q + I+L R Y E + +L ++TR +G+ V+ + R + Q R + + Sbjct: 5 FQAEGIVLKSRDYQETDQLLTILTRTHGKLEAIVKGVRKPRSSLRSGTQQLCRSRFLFYA 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + E + Y + + + +Y +L L Sbjct: 65 GKSLATVTQCEVQ-EIYGPLRQDLKRLAYAYYLVEIADGVVMPGQVNQAMYLLLQQGLEA 123 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT---QDLLWVSPKSGGAVCRSVGL 177 + E LK +G L C + + ++P +GGA+C Sbjct: 124 L-GELEPALVARAFEARTLKLLGLAPRLEACALCQRELKGNGRVAIAPAAGGALCPEC-- 180 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNK 215 + +L L +L +L + Sbjct: 181 ----RGHQGREYLVSRGGVKTWQQLN---RLNWSYLKR 211 >gi|300087574|ref|YP_003758096.1| DNA repair protein RecO [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527307|gb|ADJ25775.1| DNA repair protein RecO [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 264 Score = 95.6 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 76/233 (32%), Gaps = 17/233 (7%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWR 59 + AI++ E + I+ TR+ GR R + S R+ L+ N + Sbjct: 6 ELKTPAIVIRRARLKEADRIITFFTRELGRVSALARGVRKPSSRLAGHLEPLNHTDLTLA 65 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + L H S Y L + RF PE E ++D+L L+ Sbjct: 66 M-GKALPTIIGSQTLNPHLCLRSSLERTSYALYFAELVARFTPEEEANRRVFDLLAEALD 124 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAV------C 172 + + E+ LL +G+ L C+ G + S G V Sbjct: 125 AACDADNLELLARYFEVNLLAALGYQPRLGACLDCGKALKTETNYFANSLGGVLCPQCAS 184 Query: 173 RSVGLPYAEKMLVLPSFLWKEEQTIDADSLK-SAFQ-----LTDYFLNKYALQ 219 R+ P + L + FL A + L +L ++ L+ Sbjct: 185 RAPVAPVSVNALKVLRFLDDHSLEQSARLILDDGLNREIRQLLGAYL-RFLLE 236 >gi|297544410|ref|YP_003676712.1| DNA repair protein RecO [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842185|gb|ADH60701.1| DNA repair protein RecO [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 248 Score = 95.6 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 67/177 (37%), Gaps = 2/177 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RSRL 62 + +AI+L S GE + + + T+ YG+ + + + + + + N+ Sbjct: 5 KTEAIVLKNNSIGETDKMATLFTKNYGKLRAVAKGARRSKSRFVNAIRPFMVANYVIFEG 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 ++E++ESH F + + L E + +LY L Sbjct: 65 QNYYYIDQWELIESHKNIEKDLVKFSVASYISETVNKILEENQKSEKLYQFLKHSFKAVN 124 Query: 123 IPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + IF+ L L+ +G+ L C+V G +DL + S GG VC Sbjct: 125 ELQIDPLIFIVSYNLKLVSLLGYMPQLDNCIVCGKREDLKYFSNSCGGVVCTICKNK 181 >gi|119897935|ref|YP_933148.1| DNA repair protein RecO [Azoarcus sp. BH72] gi|166221882|sp|A1K606|RECO_AZOSB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119670348|emb|CAL94261.1| DNA repair protein RecO (recombination protein O) [Azoarcus sp. BH72] Length = 243 Score = 95.6 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 57/151 (37%), Gaps = 5/151 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQ 64 A +L + E ++I+EV +R +GR + + + +L A + ++W Sbjct: 12 AWVLHTLPWRETSLIVEVFSRDHGRLALVAKGARRPHSAFRGVLMAFQPLLMDWSGGGEV 71 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 LL+ L G L + P +P L+ + + Sbjct: 72 RT---LVRAEWQGGQPLLTGQALLCGYYLNELLVKLTPRDDPHPNLFVAYADAVRELGLG 128 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + Q EL LL+ +G+G++L V +G Sbjct: 129 RPPPPVLRQFELALLQELGYGIELVHDVQSG 159 >gi|221135231|ref|ZP_03561534.1| DNA repair protein RecO [Glaciecola sp. HTCC2999] Length = 242 Score = 95.6 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 40/242 (16%), Positives = 82/242 (33%), Gaps = 21/242 (8%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L R+Y E + ++++++ + G+ R +S + + +LQ + + Sbjct: 10 TGFVLHRRAYQESSFLVDILSLEAGKIRCVARGMRSAKSDRKSVLQPFQPIACELTGKSE 69 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + +S L + G+ + R LP PC ++ + L Sbjct: 70 LKSVKNAENTDKSIP---LQHTSLFCGMYLNELINRVLPSNIPCPDIVNDYYETLKQLHT 126 Query: 124 --------PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRS 174 EL LL +G+ DL+ V T +D + S + Sbjct: 127 SQKFNSTLQPHQEAQLRCFELNLLAELGYLPDLSCEVRTQTAIEDDMDYVFISDQGLFLK 186 Query: 175 VGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFL 233 P+ + ++ +SL++A +T + A Q + RE F+ Sbjct: 187 QWYPHLTSVKGQWINDALAQR-WHPESLRTAKWIT-----RQAFQPLLGDKPLKSRELFV 240 Query: 234 GK 235 K Sbjct: 241 SK 242 >gi|188585832|ref|YP_001917377.1| DNA repair protein RecO [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350519|gb|ACB84789.1| DNA repair protein RecO [Natranaerobius thermophilus JW/NM-WN-LF] Length = 257 Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 77/194 (39%), Gaps = 2/194 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 + DA+++ R Y + + I+ + T YGR V+ + + + + N++ Sbjct: 5 YNSDAVVIRSRDYRDYDKIINLFTPYYGRVSAVVKGVKKPKSKLAGIVQSFTYGNYQLYS 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNIFLNCH 121 ++LG + +L + + + I + + +PE E L+ + + Sbjct: 65 GKSLGRLVQGKVLHGFQELRTDLVLMSAGMCILELIDKAIPEGEEYPALFGVTLSCFHLL 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVCRSVGLPYA 180 + + E L+ N+G +L+ C+ G Q L+ P++GG +C + Sbjct: 125 EKSYPPSLVLRIFEAKLIHNLGVSPELSGCINHGSITQGNLYFDPETGGLICETCFEQLT 184 Query: 181 EKMLVLPSFLWKEE 194 E +F ++ Sbjct: 185 ENRGPGRAFPVEKG 198 >gi|212636521|ref|YP_002313046.1| Recombination protein O, RecO [Shewanella piezotolerans WP3] gi|212558005|gb|ACJ30459.1| Recombination protein O, RecO [Shewanella piezotolerans WP3] Length = 237 Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 73/235 (31%), Gaps = 12/235 (5%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM-QPILQAGNLVRVNWRSRLA 63 + +L R + E ++++ ++ GR R G S + I+Q + + + Sbjct: 2 ERGYVLHTRPFRESSVLVNLLVDGKGRVDAVARLGSSKNSIRSIVQPFQPLIFQLQGKSD 61 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 +V + A L+ + GL L R L + L+ + L Sbjct: 62 LKN---LKQVEAASPAVPLTGNCLYSGLYLNELLIRCLTVQHSAENLFFNYHQTLIAMAK 118 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA-EK 182 ++ EL LL+ +G L + + + Y K Sbjct: 119 EFNQSQLR-YFELALLQELGTMPSLEYDPSGAAMTASGFYRLEIEHGFMPVIATQYNQHK 177 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKL 236 ++Q++ A A + L + L + R FL K+ Sbjct: 178 FFTGEMLFALKKQSLSATHFAEAKK-----LMRQLLAPTLGDKPLHSRNLFLKKM 227 >gi|225182108|ref|ZP_03735536.1| DNA repair protein RecO [Dethiobacter alkaliphilus AHT 1] gi|225167195|gb|EEG76018.1| DNA repair protein RecO [Dethiobacter alkaliphilus AHT 1] Length = 247 Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 66/173 (38%), Gaps = 1/173 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRL 62 + AI+L R Y E + ++ ++TR G+ R + + + L + R Sbjct: 5 RSPAIVLRGRDYREADRLVTLLTRDAGKVTVVARGTKKTKSKFSALVEPLTLGHFLLRRG 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + E+++ + + LF Y R LPE EP + ++ +L L + Sbjct: 65 KSLDTLIQGEIIKPYNSLRKDLLLFTYAQYFCEVCERSLPENEPAVPVFTLLLTALETLE 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + ++ EL LL +GF L C G +P GG +C Sbjct: 125 TEADSARVARCFELNLLDELGFRPVLDACCTCGTATGPFLFTPGHGGLLCGHC 177 >gi|331004917|ref|ZP_08328331.1| DNA recombination and repair protein RecO [gamma proteobacterium IMCC1989] gi|330421267|gb|EGG95519.1| DNA recombination and repair protein RecO [gamma proteobacterium IMCC1989] Length = 229 Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats. Identities = 36/235 (15%), Positives = 81/235 (34%), Gaps = 18/235 (7%) Query: 10 LGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ-----SHRMQPILQAGNLVRVNWRSRLAQ 64 L R Y + +++++++++ +G+ R + S + +LQ + ++W + Sbjct: 2 LHTRPYRDTSLLVDILSQSHGKLTLIARGARKTSKSSQNPRHLLQPFMPLSLSWTGKGTL 61 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH-KI 123 + + A L + + L L E +P ++Y L+ Sbjct: 62 KT---LTTMEAAAPAIPLIGHHLYSAMYANELLVYLLQEGDPNEDIYVHYEKLLSMLSNT 118 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCRSVGLPYAE 181 I Q E LL +G+ + + T + + G V + Sbjct: 119 QYSIEAALRQFEFALLAVLGYEIGFSHDAETQLPLKASEYYYYVHEQGFVAANAHPEIRG 178 Query: 182 KMLVLPSFLWKEEQTID-ADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLG 234 S L + ++L++A Q+ + AL+ + + +E FL Sbjct: 179 MSFDGESLLGISVSNYERPNTLQAAKQI-----ARMALKPYLRNRPLHSKELFLS 228 >gi|307266974|ref|ZP_07548491.1| DNA repair protein RecO [Thermoanaerobacter wiegelii Rt8.B1] gi|306918023|gb|EFN48280.1| DNA repair protein RecO [Thermoanaerobacter wiegelii Rt8.B1] Length = 248 Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 69/177 (38%), Gaps = 2/177 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RSRL 62 + +AI+L GE + I + T+ YG+ + + + + + V N+ Sbjct: 5 KTEAIVLKNNLIGETDKIATLFTKSYGKLQAVAKGARRSKSRFVNAIRLFVVANYVIFEG 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 ++E++E+H + F + + L E + LY L L Sbjct: 65 QNYYYIDQWELIEAHKNIEKDLAKFSVASYIAETINKILEENQKSERLYLFLKHSLKAVD 124 Query: 123 IPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + IF+ L L+ +G+ L CVV G ++L + S GGAVC + Sbjct: 125 ELQIDPLIFISSYNLKLVSLLGYMPQLDNCVVCGKRENLKYFSNSCGGAVCINCKNK 181 >gi|302391465|ref|YP_003827285.1| DNA repair protein RecO [Acetohalobium arabaticum DSM 5501] gi|302203542|gb|ADL12220.1| DNA repair protein RecO [Acetohalobium arabaticum DSM 5501] Length = 251 Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 61/180 (33%), Gaps = 4/180 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RSR 61 ++ +AI+L E + I+ + TRQ+G+ + + + ++ + Sbjct: 4 YKTEAIVLKYYELKEADKIIVLYTRQHGKVQAVANGARKTKSRLAGSVELFTYSDFLLYQ 63 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + E++ S + Y + + F + E L+ +L L Sbjct: 64 GKSLSTISQTEIINSFASLRDDLFKMAYASYVVEVVNEFTVDEEKNEPLFALLLATLYML 123 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG---VTQDLLWVSPKSGGAVCRSVGLP 178 + EL LL +G+ L CV D + S K GG VC L Sbjct: 124 DRGEELELATRFFELRLLNLLGYRPQLDACVDCDLDLAKIDKVKFSSKLGGVVCADCALE 183 >gi|302038212|ref|YP_003798534.1| putative DNA repair protein RecO [Candidatus Nitrospira defluvii] gi|300606276|emb|CBK42609.1| putative DNA repair protein RecO [Candidatus Nitrospira defluvii] Length = 252 Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 66/178 (37%), Gaps = 5/178 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR 61 + AI+L R +G+ + I+ T + G+ G R + + + +++ L +++ + Sbjct: 5 KTAAIVLHSRKWGDADRIVTFYTMRLGKLRGVARGARRLKSRLGGMIEPFTLCQLDLFEK 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER-EPCLELYDMLNIFLNC 120 +L L+ AK + +V L + +P +++ML L Sbjct: 65 PGDSLYRISQVALDEPFAKFRDDLTLMTAAGRMVNLVSAVMAEGDPEPRVFEMLESGLRT 124 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGGAVCRSVG 176 + ++ LL GF +C G L SP +GG VC Sbjct: 125 LLESRDAAWTTLLFQIRLLGMTGFRPQTEQCATCGQVHRSPLPQFSPMAGGIVCERCA 182 >gi|255065035|ref|ZP_05316890.1| DNA repair protein RecO [Neisseria sicca ATCC 29256] gi|255050456|gb|EET45920.1| DNA repair protein RecO [Neisseria sicca ATCC 29256] Length = 262 Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 65/233 (27%), Gaps = 16/233 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +EV +R+YGR R+ + + + +L V +W Sbjct: 28 FLLASAPWRESSLWVEVFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASWYGSQELK 87 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 GL + + +P ELYD L + S Sbjct: 88 TLH---RAEWIGGWPQPQGRALFSGLYINELMLKLTTREDPIPELYDALEAVMRAVCGES 144 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + E LL +GF DL + AV Sbjct: 145 GHTAALRRFEWTLLNRLGFAPDLFHDGNGEAIRAEETYWLTPENAVVPIEEAERFNPRNH 204 Query: 186 LP------SFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENF 232 +E +SL + ++T ++ L I R+ Sbjct: 205 GVAIGGDILIQLREGDFTHPESLGQSLKITRLLIDN--LLPEGI---KSRQVL 252 >gi|254796817|ref|YP_003081654.1| DNA repair protein RecO [Neorickettsia risticii str. Illinois] gi|254590066|gb|ACT69428.1| DNA repair protein RecO [Neorickettsia risticii str. Illinois] Length = 238 Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 8/203 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W+++ I+L + E + + T+ YG G + + GN+V W + Sbjct: 1 MQWENEGIVLSNKGLVENKAVTTLFTKDYGLKRGLC------SRKATIDVGNVVYCKWSA 54 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNIFLN 119 RL LG FR EV E L + L L ++ L + LPE EP E+Y + L Sbjct: 55 RLESQLGYFRVEVKEIISPFLFTDYKKLKLLNAVLSILLKVLPENEPQKEIYKIFIQLLQ 114 Query: 120 CHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 K + ++L +L+++GF LDL++C VTG T++L ++SPK+G AV ++VG Sbjct: 115 AFKSETSCYYRQYIEMDLSILRHLGFQLDLSRCTVTGETKNLFYISPKTGRAVTKAVGEA 174 Query: 179 YAEKMLVLPSFLWKEEQTIDADS 201 Y +K+L+LP L+K + + Sbjct: 175 YKDKLLLLPPSLYKIANGLSLED 197 >gi|226943501|ref|YP_002798574.1| DNA repair protein RecO [Azotobacter vinelandii DJ] gi|226718428|gb|ACO77599.1| DNA repair protein RecO [Azotobacter vinelandii DJ] Length = 230 Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 76/231 (32%), Gaps = 12/231 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A IL R Y E +++ + T GR +R+ + + + + + + R R Sbjct: 5 PAFILHSRPYRESSVLADFFTP-QGRLRAAMRSARG-KSGSLARPFVPLELVLRGRSELK 62 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + + L+ + GL L R LP +P L++ ++ L+ + Sbjct: 63 S---VARLESNGSPRWLTGASLFSGLYLNELLIRLLPPEDPFPSLFEHYSLTLDALAVGR 119 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + + E LL +G+G L + + Q V + Sbjct: 120 PLEPLLRAFEWRLLVELGYGFSLDRDLNGQSVQVRRLYRLLPD--VGLEPVDQLQPGLFS 177 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHL-LRENFLGK 235 L E +A + L + AL ++ L RE F Sbjct: 178 GGELLAMAEADWRFPGALAAAKR----LMRQALAPHLGGRPLVSRELFTNL 224 >gi|15676358|ref|NP_273494.1| DNA repair protein (recombination protein o) [Neisseria meningitidis MC58] gi|17865562|sp|Q9K0W0|RECO_NEIMB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|7225672|gb|AAF40884.1| DNA repair protein RecO [Neisseria meningitidis MC58] gi|316985790|gb|EFV64733.1| DNA repair protein RecO [Neisseria meningitidis H44/76] gi|325140961|gb|EGC63468.1| DNA repair protein RecO [Neisseria meningitidis CU385] gi|325199634|gb|ADY95089.1| DNA repair protein RecO [Neisseria meningitidis H44/76] Length = 263 Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 74/234 (31%), Gaps = 16/234 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L V V+W Sbjct: 12 FMLASSPWRESSLWVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSVSWYGSQELK 71 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 V GL + + +P ELYD L + + Sbjct: 72 TLHRAEWVGGWRQP---QGRALFGGLYVNELVLKLTAREDPVPELYDALAEVMEAVCCKA 128 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL----PYAE 181 + E LL +G DL + G + AV P+A Sbjct: 129 AYIDDLRRFEWRLLNLLGVAPDLNRDGDGGTIAAGGTYLVRPETAVFPVGKGFAVPPHAA 188 Query: 182 KMLVLPSFLWK--EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 ++ L E A+SL+ A ++T F+ L + R+ Sbjct: 189 GVVAPGQSLIDLREGSFRTAESLQQALKITRLFI--RHLLPEGL---KSRQVLE 237 >gi|308234875|ref|ZP_07665612.1| DNA repair protein RecO [Gardnerella vaginalis ATCC 14018] Length = 244 Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats. Identities = 37/241 (15%), Positives = 78/241 (32%), Gaps = 23/241 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 + D+A++L GE + I+ ++T+++G+ + + + + L+ V + + Sbjct: 4 YNDEAVVLKTFPLGEADRIVVMLTKKHGKIRAVAKGVRKIKSRFGARLEPFMRVNALFAT 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 ++ V + L+ + + N+ + Sbjct: 64 GRTFDVVSQAVLVSAYAESICADYDLYSRASMIAEIADDLVSSSAQYQDSCMQYNLLVAA 123 Query: 121 HK----IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 I L LK G+ L +CVV DL + S SGG +C Sbjct: 124 LSALSRGLHSADSIGFSYVLRALKLAGWSPMLNECVVCATKDDLSYFSSCSGGVMCSKDH 183 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQL-----------TDYFLNK-----YALQH 220 + K L F D ++ + +Y+L + + L++ Sbjct: 184 DLQSIKCNGLARFQMISLINGDWKNI-DGTDIDYLTYRCVEQWCEYYLERPIKSMHLLEN 242 Query: 221 N 221 N Sbjct: 243 N 243 >gi|329934670|ref|ZP_08284711.1| DNA recombination and repair protein RecO [Streptomyces griseoaurantiacus M045] gi|329305492|gb|EGG49348.1| DNA recombination and repair protein RecO [Streptomyces griseoaurantiacus M045] Length = 248 Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 80/211 (37%), Gaps = 14/211 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V V + S Sbjct: 4 FRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFS 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 + ++ +G + E + + +++ +++ + E + Y + Sbjct: 64 KGSELIGRGLPLCTQSETIAPYGGGIVTDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + ++ LL+++ G+ C G+ + S SGG Sbjct: 124 LVGGLRTLSRDEHAPHLV--LDAFLLRSLAVNGYAPSFGDCAKCGMPGPNRFFSVASGGV 181 Query: 171 VCRSVGLPYAEKMLVLPSFLWKEEQTIDADS 201 VC +P + L T D + Sbjct: 182 VCADCRVPGSVVPSPQALELLGALLTGDWAT 212 >gi|330811508|ref|YP_004355970.1| DNA repair protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379616|gb|AEA70966.1| DNA repair protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 229 Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 53/151 (35%), Gaps = 5/151 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A +L R+Y E + +++ +T GR +R + + + + + V +R R Sbjct: 11 AYVLHSRAYRESSALVDFLTP-QGRLRAVLRGARG-KAGTLARPFVPLEVEFRGRGELKN 68 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 A L+ GL L R LP +P ++D L Sbjct: 69 VGRMESN---GVAAWLNGEALFSGLYLNELLIRLLPAEDPHPAVFDHYAATLLALAEGRP 125 Query: 127 IGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + + E LL ++G+G L + Sbjct: 126 LEPLLRSFEWRLLDDLGYGFALNTDLHGEPI 156 >gi|261365754|ref|ZP_05978637.1| DNA repair protein RecO [Neisseria mucosa ATCC 25996] gi|288565714|gb|EFC87274.1| DNA repair protein RecO [Neisseria mucosa ATCC 25996] Length = 246 Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 65/233 (27%), Gaps = 16/233 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +EV +R+YGR R+ + + + +L V +W Sbjct: 12 FLLASAPWRESSLWVEVFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASWYGSQELK 71 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 GL + + +P ELYD L + + Sbjct: 72 TLH---RAEWIGGWPQPQGRALFSGLYINELMLKLTAREDPIPELYDALEAVMRAVCGEN 128 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + E LL +GF DL + AV Sbjct: 129 SHTAALRRFEWALLTRLGFAPDLFHDGNGEAIRAEETYWLTPENAVVPIEEAERFNPRNH 188 Query: 186 LP------SFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENF 232 +E +SL + ++T ++ L I R+ Sbjct: 189 GVAVSGDILIQLREGDFTHPESLGQSLKITRLLIDN--LLPEGI---KSRQVL 236 >gi|328882348|emb|CCA55587.1| DNA recombination and repair protein RecO [Streptomyces venezuelae ATCC 10712] Length = 249 Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 80/211 (37%), Gaps = 14/211 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V V + + Sbjct: 4 FRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 R ++ +G + E + + +++ +++ + E + Y + Sbjct: 64 RGSELVGRGLPLCTQSETIAPYGGGIVTDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + ++ LL+++ G+ C G+ + S +GG Sbjct: 124 LVGGLRTLARGEHAPHL--ILDAFLLRSLAVNGYAPSFEDCAKCGIHGPNRFFSVAAGGV 181 Query: 171 VCRSVGLPYAEKMLVLPSFLWKEEQTIDADS 201 +C +P + L T D + Sbjct: 182 ICGDCRVPGSVVPSPEAIGLLSALLTGDWAT 212 >gi|309378286|emb|CBX23074.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 263 Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 74/234 (31%), Gaps = 16/234 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L V V+W Sbjct: 12 FMLASSPWRESSLWVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSVSWYGSQELK 71 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 V GL + + +P ELYD L + + Sbjct: 72 TLHRAEWVGGWRQP---QGRALFGGLYVNELVLKLTAREDPVPELYDALAKVMEAVCCKA 128 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL----PYAE 181 + E LL +G DL + G + AV P+A Sbjct: 129 AYIDDLRRFEWRLLNLLGVAPDLNRDGDGGTIAAGGTYLVRPETAVFPVGKGFAVPPHAA 188 Query: 182 KMLVLPSFLWK--EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 ++ L E A+SL+ A ++T F+ L + R+ Sbjct: 189 GVVAPGQSLIDLREGSFRTAESLQQALKITRLFI--RHLLPEGL---KSRQVLE 237 >gi|262277164|ref|ZP_06054957.1| DNA repair protein RecO [alpha proteobacterium HIMB114] gi|262224267|gb|EEY74726.1| DNA repair protein RecO [alpha proteobacterium HIMB114] Length = 208 Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 94/239 (39%), Gaps = 32/239 (13%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W D +L V + E + +++V +R++G G V S + +P LQ GN +++N+ S Sbjct: 1 MRWSDIGYLLSVSATKENSSLVKVFSREHGCVTGVVYGSSSKKKKPDLQIGNKIKLNFNS 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSS-SLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + LG F E++E+ K + + SI + + +PE++ E +D + + Sbjct: 61 KNEDALGYFSIELMENISIKFFNDLKKLNLLIISIEVISKIMPEQQKYTECFDEYDQLIK 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + S+ + E LKNIG+G+DL + Sbjct: 121 SLEGDSLKSYL--IWEFNFLKNIGYGVDLNE----------------------------- 149 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 V+ S L + LK+ F L ++ + I R L L E Sbjct: 150 EGFNPVIKSILNGSSIDFTIEDLKAIFNLNSETISNRLVDVINITNFKNRPKILNYLNE 208 >gi|239931393|ref|ZP_04688346.1| DNA repair protein RecO [Streptomyces ghanaensis ATCC 14672] gi|291439766|ref|ZP_06579156.1| DNA repair protein RecO [Streptomyces ghanaensis ATCC 14672] gi|291342661|gb|EFE69617.1| DNA repair protein RecO [Streptomyces ghanaensis ATCC 14672] Length = 248 Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 82/211 (38%), Gaps = 14/211 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V V + + Sbjct: 4 FRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 + ++ +G + E + + +++ +++ + E + Y + Sbjct: 64 KGSELVGRGLPLCTQSETIAPYGGGIVTDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + ++ LL+++ G+ C G+ + S SGG+ Sbjct: 124 LVGALRTLARGEHAPHLV--LDAFLLRSLAVNGYAPSFGDCAKCGMPGPNRFFSVASGGS 181 Query: 171 VCRSVGLPYAEKMLVLPSFLWKEEQTIDADS 201 +C +P + L T D ++ Sbjct: 182 LCVDCRVPGSVVPSPQALELLGALLTGDWET 212 >gi|282861797|ref|ZP_06270861.1| DNA repair protein RecO [Streptomyces sp. ACTE] gi|282563613|gb|EFB69151.1| DNA repair protein RecO [Streptomyces sp. ACTE] Length = 248 Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 81/211 (38%), Gaps = 14/211 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD ++L + GE + I+ ++TR +GR R + + + L+ + V V + + Sbjct: 4 FRDDGVVLRTQKLGEADRIITILTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 R ++ +G + E + + +++ +++ + E + Y + Sbjct: 64 RGSELIGRGLPLCTQSETIAPYGGGIVADYGRYTAGTAMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + ++ LL+++ G+ C G+ + S SGG Sbjct: 124 LVGGLRTLARAEHAPNL--ILDAFLLRSLAVNGYAPSFDDCARCGMPGPNRFFSVASGGV 181 Query: 171 VCRSVGLPYAEKMLVLPSFLWKEEQTIDADS 201 VC +P + L T D ++ Sbjct: 182 VCGDCRVPGSVVPSAEAVELLSALLTGDWET 212 >gi|251796249|ref|YP_003010980.1| DNA repair protein RecO [Paenibacillus sp. JDR-2] gi|247543875|gb|ACT00894.1| DNA repair protein RecO [Paenibacillus sp. JDR-2] Length = 249 Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 67/178 (37%), Gaps = 3/178 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M ++ + I++ YGE N I+ ++T+ G+ VR + + + + Q + Sbjct: 1 MLYRVEGIVIRSMDYGEGNKIITLLTKTNGKLGVMVRGAKKVKSRHASLAQPFTYGEFVF 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R E+LESH L Y + L E E L++ L L Sbjct: 61 F-RNKGLGTLNAGEILESHHLLREQLDLAAYASYLAELTDKMLQEDESGAMLFEQLKAGL 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + E+ +L+ G+ +L CV Q ++P +GG +C Sbjct: 120 AAMEEGKDPQIVSHLFEMRILEAAGYAPELEICVNCSSEQGPFRLNPHAGGVLCTRCA 177 >gi|70728455|ref|YP_258204.1| DNA repair protein RecO [Pseudomonas fluorescens Pf-5] gi|92087031|sp|Q4KHS9|RECO_PSEF5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|68342754|gb|AAY90360.1| DNA repair protein RecO [Pseudomonas fluorescens Pf-5] Length = 229 Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 56/147 (38%), Gaps = 5/147 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A +L R+Y E + +++ +T GR +RN + + + + + V +R R Sbjct: 11 AYVLHSRAYRESSALVDFLTP-QGRLRAVLRNARG-KAGTLARPFVPLEVEFRGRGELKN 68 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 + + A L+ GL L R LP +P ++D L Sbjct: 69 ---VGRMESAGIAAWLNGEALFSGLYLNELLIRLLPAEDPHPAVFDHYAATLLALAEGRP 125 Query: 127 IGKIFVQIELMLLKNIGFGLDLTKCVV 153 + + E LL ++G+G L + Sbjct: 126 LEPLLRAFEWRLLDDLGYGFALDSDIH 152 >gi|254521728|ref|ZP_05133783.1| DNA repair protein RecO [Stenotrophomonas sp. SKA14] gi|219719319|gb|EED37844.1| DNA repair protein RecO [Stenotrophomonas sp. SKA14] Length = 239 Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 72/230 (31%), Gaps = 14/230 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRN---GQSHRMQPILQAGNLVRVN 57 M D +L R+Y E ++++EV++ Q+GR R + ++ LQ +R + Sbjct: 2 MIEDDTGFVLHARAYRETSLLVEVLSAQHGRIGLLARGVSTAKGQVLRAALQPLQWIRFS 61 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R + A L L G R P ++P ELY Sbjct: 62 AQQRGELAQLRAAEALD---AAPRLVGQAMLAGFYLSELTLRLAPRQDPLPELYLAYGEA 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSG---GAVCRS 174 + + + + E LL +G G +L + Sbjct: 119 RARLAVGAGLAWTLRRFERELLSALGLGFELDSASDGQPIDPAARYELDPQEGAQRLLSE 178 Query: 175 VGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIH 224 G ++ DA L ++ +L + L H++ Sbjct: 179 RGGERRAAATGSALLALAADEEPDATDL-ASLRLP----MRRVLAHHLGP 223 >gi|25028739|ref|NP_738793.1| DNA repair protein RecO [Corynebacterium efficiens YS-314] gi|259507800|ref|ZP_05750700.1| DNA repair protein RecO [Corynebacterium efficiens YS-314] gi|23494025|dbj|BAC18993.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259164593|gb|EEW49147.1| DNA repair protein RecO [Corynebacterium efficiens YS-314] Length = 242 Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 65/183 (35%), Gaps = 3/183 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D A+++ +GE + I+ ++TR +G G + + + + LQ + V Sbjct: 6 YRDRALVVRTHDFGEADRIVVLLTRDHGIVRGVAKGVRRSKSRFGSRLQLFVELDVQLYP 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + + + ++ +I+ + + E L+D L Sbjct: 66 -GRNLSTISGADTVGYYASGIIDDFKRYSAASAILEIASSIAPMEQGPYLFDATTAALQR 124 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + + L + + G+ L C G P +GGAVC + Sbjct: 125 MQNAEHPVLLLDEYMLRAMDHAGWAPSLFDCAQCGRPGPHTAFHPGAGGAVCLYCRPQGS 184 Query: 181 EKM 183 K+ Sbjct: 185 AKI 187 >gi|254382925|ref|ZP_04998281.1| DNA repair protein recO [Streptomyces sp. Mg1] gi|194341826|gb|EDX22792.1| DNA repair protein recO [Streptomyces sp. Mg1] Length = 248 Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 75/190 (39%), Gaps = 14/190 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V + + Sbjct: 4 FRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGAGLEPFSHADVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 R ++ +G + +++ + +++ +++ E E + Y + Sbjct: 64 RGSELIGRSLPLCTQTQIIAPYGNGIVTDYARYTAGTAMLETAERFTENEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + ++ LL+++ G+ C G+ S +GG Sbjct: 124 LVGALRTLSRGEHEPHL--ILDAFLLRSLAVNGYAPSFDDCAKCGIHGPNRHFSVAAGGV 181 Query: 171 VCRSVGLPYA 180 +C +P + Sbjct: 182 ICGDCRVPGS 191 >gi|42559491|sp|Q8RB48|RECO_THETN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 247 Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 74/193 (38%), Gaps = 3/193 (1%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW- 58 M + + +AI+L EK+ I + TR YG+ + + + + + + N+ Sbjct: 1 MRFLKTEAIVLKSNLISEKDKIATLFTRDYGKLQAVAKGARRSKSRFVNAVRPFIVANYV 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 ++E++++ F + R L E++ +LY L Sbjct: 61 IFEGQNYYYIDQWELVKNFENIEKDLKKFALASYISETISRVLEEKQKNTKLYFFTKHSL 120 Query: 119 NCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + +V IF+ L L+ +G+ L C V G ++L + S GGAVC+ Sbjct: 121 EAVESLNVETSIFLFSYTLKLISLLGYMPVLDSCAVCGKKENLSYFSSSCGGAVCKDCNE 180 Query: 178 PYAEKMLVLPSFL 190 + + L Sbjct: 181 TCKDAKFLNKKVL 193 >gi|161831256|ref|YP_001597343.1| DNA repair protein RecO [Coxiella burnetii RSA 331] gi|189039654|sp|A9N940|RECO_COXBR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|161763123|gb|ABX78765.1| DNA repair protein RecO [Coxiella burnetii RSA 331] Length = 234 Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 81/234 (34%), Gaps = 14/234 (5%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRL 62 + A IL R Y ++ILE++T +GR R+ + R + L+ + + ++W R Sbjct: 8 EPAFILHRRPYSNTSLILELLTPNHGRVCALARSARGLKSRYKGKLELFSPLLISWSGRS 67 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 F +V + LL L G L R L +P L L+ L Sbjct: 68 DLK---FLGDVEANGMPYLLEGEALLCGFYLNELLIRLLHHDDPYLRLFHHYQNTLEKL- 123 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG---VTQDLLWVSPKSGGAVCRSVGLPY 179 + + E LL +G+GL L+ V P G +C Sbjct: 124 VNGRLEATLRCFEKQLLDELGYGLPLSCDVEMKLPFKPDQFYQYLPDRGFLLCEKSEESE 183 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + S L +E++ +S + +L + L + RE Sbjct: 184 ERDVFSGKSLLALQEESFSDESSLKEIK----YLMRLTLNRLLGKKPLKTRELL 233 >gi|302534318|ref|ZP_07286660.1| DNA repair protein RecO [Streptomyces sp. C] gi|302443213|gb|EFL15029.1| DNA repair protein RecO [Streptomyces sp. C] Length = 248 Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 76/210 (36%), Gaps = 14/210 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V + + Sbjct: 4 FRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHADVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 R + +G + E++ + + + +++ E E + Y + Sbjct: 64 RGSDLVGRSLPLCTQTEIIAPYGNGIATDYARYTAGTAMLETAERFTENEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + ++ LL+++ G+ C G+ S +GG Sbjct: 124 LVGALRTLSRGEHEPHL--ILDAFLLRSLAVNGYAPSFEDCAKCGIHGPNRHFSVAAGGV 181 Query: 171 VCRSVGLPYAEKMLVLPSFLWKEEQTIDAD 200 +C +P + L T D Sbjct: 182 ICGDCRVPGSVVPSSEAIGLLSALLTGDWK 211 >gi|89895849|ref|YP_519336.1| hypothetical protein DSY3103 [Desulfitobacterium hafniense Y51] gi|119361456|sp|Q24SV0|RECO_DESHY RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|89335297|dbj|BAE84892.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 273 Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 61/176 (34%), Gaps = 4/176 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RSR 61 + DA+++ R YGE + +L + +R+YG+ + + + + A + + Sbjct: 4 YHADALVIRSREYGESDRLLTLFSREYGKIQAVAKGVRKPKSRQRAGAQLFTYAEYLLHK 63 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + ES + + L +P EL+ + L Sbjct: 64 GKSLDTVNQVSPRESFPHLWTDLDMSMAATAMAELLDLATLPGQPHPELFTLTFSSLFLV 123 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCRSV 175 + L+ +G+ L +C G V + L SP +GG VCR Sbjct: 124 ESCDPALVQCTYALK-LMNYLGYRPRLVECAECGQRVQGERLLFSPDAGGVVCRQC 178 >gi|219670279|ref|YP_002460714.1| DNA repair protein RecO [Desulfitobacterium hafniense DCB-2] gi|254790519|sp|B8FUK8|RECO_DESHD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|219540539|gb|ACL22278.1| DNA repair protein RecO [Desulfitobacterium hafniense DCB-2] Length = 273 Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 61/176 (34%), Gaps = 4/176 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RSR 61 + DA+++ R YGE + +L + +R+YG+ + + + + A + + Sbjct: 4 YHADALVIRSREYGESDRLLTLFSREYGKIQAVAKGVRKPKSRQRAGAQLFTYAEYLLHK 63 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + ES + + L +P EL+ + L Sbjct: 64 GKSLDTVNQVSPRESFPHLWTDLDMSMAATAMAELLDLATLPGQPHPELFTLTFSSLFLV 123 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCRSV 175 + L+ +G+ L +C G V + L SP +GG VCR Sbjct: 124 ESCDPALVQCTYALK-LMNYLGYRPRLVECAECGQRVQGERLLFSPDAGGVVCRQC 178 >gi|311895950|dbj|BAJ28358.1| putative DNA repair protein RecO [Kitasatospora setae KM-6054] Length = 248 Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 84/211 (39%), Gaps = 14/211 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ +TRQ+G+ R + + + L+ + V V + S Sbjct: 4 FRDDGIVLRTQKLGEADRIITFLTRQHGQVRAVARGVRRTKSKFGARLEPFSHVDVQFFS 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 R + +G + E + + A+++ +++ E E + Y + Sbjct: 64 RGSDLVGRTLPLCTQVETIAPYGARIVDDYTRYTAGTAMLETAERFAENEGQPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + + ++ LL+++ G+G T C G+ + S ++GG Sbjct: 124 LVGALRTLAAGTHQAHLV--LDAFLLRSLAVNGYGASFTDCARCGLPGPNRFFSLQAGGV 181 Query: 171 VCRSVGLPYAEKMLVLPSFLWKEEQTIDADS 201 +C +P + L + D + Sbjct: 182 LCGDCRVPGSAVPSPETLVLLGALLSGDWQT 212 >gi|146317683|ref|YP_001197395.1| DNA repair protein RecO [Streptococcus suis 05ZYH33] gi|146319875|ref|YP_001199586.1| DNA repair protein RecO [Streptococcus suis 98HAH33] gi|223932387|ref|ZP_03624390.1| DNA repair protein RecO [Streptococcus suis 89/1591] gi|253750945|ref|YP_003024086.1| DNA repair protein RecO [Streptococcus suis SC84] gi|253752844|ref|YP_003025984.1| DNA repair protein RecO [Streptococcus suis P1/7] gi|302023128|ref|ZP_07248339.1| DNA repair protein RecO [Streptococcus suis 05HAS68] gi|330831873|ref|YP_004400698.1| DNA repair protein RecO [Streptococcus suis ST3] gi|166221913|sp|A4VYJ7|RECO_STRS2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166221915|sp|A4VSA6|RECO_STRSY RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|145688489|gb|ABP88995.1| Recombinational DNA repair protein (RecF pathway) [Streptococcus suis 05ZYH33] gi|145690681|gb|ABP91186.1| Recombinational DNA repair protein (RecF pathway) [Streptococcus suis 98HAH33] gi|223899068|gb|EEF65426.1| DNA repair protein RecO [Streptococcus suis 89/1591] gi|251815234|emb|CAZ50798.1| DNA repair protein RecO [Streptococcus suis SC84] gi|251819089|emb|CAR44123.1| DNA repair protein RecO [Streptococcus suis P1/7] gi|292557486|gb|ADE30487.1| Recombination protein O [Streptococcus suis GZ1] gi|319757194|gb|ADV69136.1| DNA repair protein RecO [Streptococcus suis JS14] gi|329306096|gb|AEB80512.1| DNA repair protein RecO [Streptococcus suis ST3] Length = 260 Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 66/203 (32%), Gaps = 2/203 (0%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 + ++L R++ E + ++++ T + G+ + FV++ ++ +Q + Sbjct: 3 RIETRGLVLYNRNFREDDKLVKIFTEKAGKRMFFVKHASKSKLVASIQPLTYADFIVKIN 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 F ++ Y + L ++ L+ L L+ Sbjct: 63 DDGLSYIEDFHQVQPFKNINGDIFKLSYATYILALADAALQDKVYDPALFAFLVKTLDLM 122 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 + + E+ LL G L+ +C S K G +C Sbjct: 123 ESGLDYEVLTNIFEIQLLGRFGISLNFHECAFCHRVGLPFDYSYKYSGVLCPQHYQQDER 182 Query: 182 KMLVLP--SFLWKEEQTIDADSL 202 + + P +L + Q I D L Sbjct: 183 RAYLDPNVPYLLDQFQAISFDEL 205 >gi|253754669|ref|YP_003027809.1| DNA repair protein RecO [Streptococcus suis BM407] gi|251817133|emb|CAZ54854.1| DNA repair protein RecO [Streptococcus suis BM407] Length = 260 Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 66/203 (32%), Gaps = 2/203 (0%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 + ++L R++ E + ++++ T + G+ + FV++ ++ +Q + Sbjct: 3 RIETRGLVLYNRNFREDDKLVKIFTEKAGKRMFFVKHASKSKLVASIQPLTYADFIVKIN 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 F ++ Y + L ++ L+ L L+ Sbjct: 63 DDGLSYIEDFHQVQPFKNINGDIFKLSYATYILALADAALQDKVYDPALFAFLVKTLDLM 122 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 + + E+ LL G L+ +C S K G +C Sbjct: 123 ESGLDYEVLTNIFEIQLLGRFGISLNFHECAFCHRVGLPFAYSYKYSGVLCPQHYQQDER 182 Query: 182 KMLVLP--SFLWKEEQTIDADSL 202 + + P +L + Q I D L Sbjct: 183 RAYLDPNVPYLLDQFQAISFDEL 205 >gi|192360449|ref|YP_001983039.1| DNA repair protein RecO [Cellvibrio japonicus Ueda107] gi|238692465|sp|B3PL65|RECO_CELJU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|190686614|gb|ACE84292.1| DNA repair protein RecO [Cellvibrio japonicus Ueda107] Length = 236 Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 76/231 (32%), Gaps = 11/231 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLA 63 A IL R Y + +++L+++T YGR R + + + +L + + VNW+ + Sbjct: 7 PAYILHARPYRDTSLLLDLLTPVYGRITAVARGVRQSKGHKRQLLNPFHRLLVNWQGKSE 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L V H L + G L R LPE++ L++ L+ Sbjct: 67 LKL---ITGVETDHHYLQLQGNALYSGFYLNELLVRLLPEQDVITGLFERYEWTLDALHR 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLD-LTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + + + E MLL+ +G+ LD L C Q + Sbjct: 124 GEPLEPLLREFEFMLLQGLGYALDFLHDCHSQQPIQSGYFYLCDIHQGFYSVPADSDPRF 183 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + L A + L + + + RE F Sbjct: 184 WIAGAHLLAIAAGDYSAAD----TRRVAKQLARLLFKPLLGKRPLKSRELF 230 >gi|29654792|ref|NP_820484.1| DNA repair protein [Coxiella burnetii RSA 493] gi|153208695|ref|ZP_01946942.1| DNA repair protein RecO [Coxiella burnetii 'MSU Goat Q177'] gi|154706512|ref|YP_001423901.1| DNA repair protein [Coxiella burnetii Dugway 5J108-111] gi|165919322|ref|ZP_02219408.1| DNA repair protein RecO [Coxiella burnetii RSA 334] gi|212212138|ref|YP_002303074.1| DNA repair protein [Coxiella burnetii CbuG_Q212] gi|212219220|ref|YP_002306007.1| DNA repair protein [Coxiella burnetii CbuK_Q154] gi|1710073|sp|P51838|RECO_COXBU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|189039653|sp|A9KFA2|RECO_COXBN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238058642|sp|B6J4J7|RECO_COXB1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238058643|sp|B6IZ01|RECO_COXB2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|439873|gb|AAA69692.1| putative [Coxiella burnetii] gi|29542060|gb|AAO90998.1| DNA repair protein [Coxiella burnetii RSA 493] gi|120575806|gb|EAX32430.1| DNA repair protein RecO [Coxiella burnetii 'MSU Goat Q177'] gi|154355798|gb|ABS77260.1| DNA repair protein [Coxiella burnetii Dugway 5J108-111] gi|165916982|gb|EDR35586.1| DNA repair protein RecO [Coxiella burnetii RSA 334] gi|212010548|gb|ACJ17929.1| DNA repair protein [Coxiella burnetii CbuG_Q212] gi|212013482|gb|ACJ20862.1| DNA repair protein [Coxiella burnetii CbuK_Q154] Length = 231 Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 45/231 (19%), Positives = 78/231 (33%), Gaps = 11/231 (4%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRL 62 + A IL R Y ++ILE++T +GR R+ + R + L+ + + ++W R Sbjct: 8 EPAFILHRRPYSNTSLILELLTPNHGRVCALARSARGLKSRYKGKLELFSPLLISWSGRS 67 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 F +V + LL L G L R L +P L L+ L Sbjct: 68 DLK---FLGDVEANGMPYLLEGEALLCGFYLNELLIRLLHHDDPYLRLFHHYQNTLEKL- 123 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + + E LL +G+GL L+ V + Sbjct: 124 VNGRLEATLRCFEKQLLDELGYGLPLSCDVEMKLPFKPDQFYQYLPDRGFLLCEKSEERD 183 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + S L +E++ +S + +L + L + RE Sbjct: 184 VFSGKSLLALQEESFSDESSLKEIK----YLMRLTLNRLLGKKPLKTRELL 230 >gi|295839012|ref|ZP_06825945.1| DNA repair protein RecO [Streptomyces sp. SPB74] gi|295827284|gb|EFG65328.1| DNA repair protein RecO [Streptomyces sp. SPB74] Length = 249 Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 80/211 (37%), Gaps = 14/211 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR GR R + + + L+ + V V + + Sbjct: 4 FRDDGIVLRTQKLGEADRIITLLTRGQGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 R ++ +G + E + + +++ +++ E + Y + Sbjct: 64 RGSELIGRGLPLCTQSETIAPYGRHIVTDYSRYTAGTAMLETAERFTANEGEPAIQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L S + ++ LL+++ G+ C G+ + S SGGA Sbjct: 124 LVGGLRTLAEGSHAPALV--MDAFLLRSLAVNGYAPSFGDCARCGLPGPNRFFSVSSGGA 181 Query: 171 VCRSVGLPYAEKMLVLPSFLWKEEQTIDADS 201 VC +P + L T D + Sbjct: 182 VCGDCRVPGSVVPSSETLILLGALLTGDWAT 212 >gi|311114387|ref|YP_003985608.1| recombination protein O [Gardnerella vaginalis ATCC 14019] gi|310945881|gb|ADP38585.1| recombination protein O [Gardnerella vaginalis ATCC 14019] Length = 247 Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 37/241 (15%), Positives = 78/241 (32%), Gaps = 23/241 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 + D+A++L GE + I+ ++T+++G+ + + + + L+ V + + Sbjct: 7 YNDEAVVLKTFPLGEADRIVVMLTKKHGKIRAVAKGVRKIKSRFGARLEPFMRVNALFAT 66 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 ++ V + L+ + + N+ + Sbjct: 67 GRTFDVVSQAVLVSAYAESICADYDLYSRASMIAEIADDLVSSSAQYQDSCMQYNLLVAA 126 Query: 121 HK----IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 I L LK G+ L +CVV DL + S SGG +C Sbjct: 127 LSALSRGLHSADSIGFSYVLRALKLAGWSPMLNECVVCATKDDLSYFSSCSGGVMCSKDH 186 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQL-----------TDYFLNK-----YALQH 220 + K L F D ++ + +Y+L + + L++ Sbjct: 187 DLQSIKCNGLARFQMISLINGDWKNI-DGTDIDYLTYRCVEQWCEYYLERPIKSMHLLEN 245 Query: 221 N 221 N Sbjct: 246 N 246 >gi|329120278|ref|ZP_08248946.1| recombination protein O [Neisseria bacilliformis ATCC BAA-1200] gi|327462619|gb|EGF08942.1| recombination protein O [Neisseria bacilliformis ATCC BAA-1200] Length = 256 Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 68/218 (31%), Gaps = 8/218 (3%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 + A +L + E ++ LE+ +R+YGR R+ + + + +L V V+W Sbjct: 8 INHEPAFLLAAAPWRESSLRLEMYSRRYGRVSLLARSARKRQSELRGVLVPFVPVSVSWY 67 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 L GL + + P + +YD L L Sbjct: 68 GGAETKTLH---RAEWLGGWPQPQGRALLSGLYLNELVLKLTPREDAQPAVYDALAQALK 124 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + E LL +G+ DL + + G Sbjct: 125 SVCTETAHAAALRRFEWRLLTELGYAPDLQSDADGNPVRAGTRYLIAAEQPPQPYAGGSV 184 Query: 180 AEKMLVLPSFLWK---EEQTIDADSLKSAFQLTDYFLN 214 + L + + E + +SL A ++T L+ Sbjct: 185 PQDALTADGGILRQLHEGRFEGGESLHEALKITRLLLD 222 >gi|239941031|ref|ZP_04692968.1| DNA repair protein RecO [Streptomyces roseosporus NRRL 15998] gi|239987510|ref|ZP_04708174.1| DNA repair protein RecO [Streptomyces roseosporus NRRL 11379] gi|291444471|ref|ZP_06583861.1| DNA repair protein recO [Streptomyces roseosporus NRRL 15998] gi|291347418|gb|EFE74322.1| DNA repair protein recO [Streptomyces roseosporus NRRL 15998] Length = 248 Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 76/190 (40%), Gaps = 14/190 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V V + + Sbjct: 4 FRDDGIVLRTQKLGEADRIITILTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 R ++ +G + E + + +++ +++ + E + Y + Sbjct: 64 RGSELVGRGLPLCTQSETIAPYGGGIVADYARYTAGTAMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + ++ LL+++ G+ C G+ + S +GG Sbjct: 124 LVGGLRTLARGEHAPHL--ILDAFLLRSLAVNGYAPSFEDCAKCGMPGPNRFFSVAAGGV 181 Query: 171 VCRSVGLPYA 180 +C +P + Sbjct: 182 ICGDCRVPGS 191 >gi|226940391|ref|YP_002795465.1| DNA repair protein RecO [Laribacter hongkongensis HLHK9] gi|254764636|sp|C1D7L6|RECO_LARHH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226715318|gb|ACO74456.1| RecO [Laribacter hongkongensis HLHK9] Length = 242 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 72/218 (33%), Gaps = 11/218 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLA 63 A +L + Y E ++++E+ TR++GR R + R ++ +L + + V W + Sbjct: 11 QAFVLHAQPYKETSLLVEMFTREHGRVGLVARGARRPRAGIRALLLPFSPLEVGWFGKSD 70 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ L+ + + G + + + +P L+D + Sbjct: 71 ---IRTLSDIDWQGGLPQLAGTPLVTGFYVNELIMKLVARDDPHEGLFDDYRTLIAHLAR 127 Query: 124 -PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 I + + EL LL G+ L + + + G Sbjct: 128 GSVAIAPVLRRFELQLLAATGYAPTLDRDLAGEPVRADAVYGFVPGEGARPGAERGCEVS 187 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQH 220 L + A L+ A FLN+ L H Sbjct: 188 GQTLLALDHGALDQASAAVLREA-----RFLNRALLTH 220 >gi|261401395|ref|ZP_05987520.1| DNA repair protein RecO [Neisseria lactamica ATCC 23970] gi|269208616|gb|EEZ75071.1| DNA repair protein RecO [Neisseria lactamica ATCC 23970] Length = 263 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 70/234 (29%), Gaps = 16/234 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L V V+W Sbjct: 12 FLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSVSWYGSQELK 71 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 V GL + + +P ELYD L + + Sbjct: 72 TLHRAEWVGGWRQP---QGRALFGGLYVNELVLKLTAREDPVPELYDALAEVMEAVCCKA 128 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL----PYAE 181 + E LL +G DL + G + AV P+A Sbjct: 129 AYIGDLRRFEWRLLNLLGVAPDLNRDGDGGTIAAGGTYLVRPETAVFPVGKGFAVPPHAA 188 Query: 182 KMLVLPSFLWK--EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 + L SL+ A ++T F+ L + R+ Sbjct: 189 GVTAPGQSLIDLRAGSFGSGQSLQDALKITRLFI--RHLLPEGL---KSRQVLE 237 >gi|297199546|ref|ZP_06916943.1| DNA repair protein RecO [Streptomyces sviceus ATCC 29083] gi|197713528|gb|EDY57562.1| DNA repair protein RecO [Streptomyces sviceus ATCC 29083] Length = 250 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 79/190 (41%), Gaps = 14/190 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD ++L + GE + I+ ++TR +GR R + + + L+ + V V + + Sbjct: 4 FRDDGVVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 R ++ +G + E + + ++S +++ + E + Y + Sbjct: 64 RGSELVGRGLPLCTQSETIAPYGGGIVSDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + ++ LL+++ G+ + C G+T + S +GG+ Sbjct: 124 LVGALRTLARGEHAPHLV--LDAFLLRSLAVNGYAPSFSDCARCGMTGPNRFFSVAAGGS 181 Query: 171 VCRSVGLPYA 180 VC +P + Sbjct: 182 VCVDCRVPGS 191 >gi|83311360|ref|YP_421624.1| recombinational DNA repair protein [Magnetospirillum magneticum AMB-1] gi|82946201|dbj|BAE51065.1| Recombinational DNA repair protein [Magnetospirillum magneticum AMB-1] Length = 206 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 42/95 (44%), Positives = 54/95 (56%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M W DD ++L VR +GE + ++TR +GRH G V GQ +PILQ GNLVR W Sbjct: 1 MEWDDDGVVLAVRRHGETGAVASLLTRSHGRHAGLVHGGQGRANRPILQPGNLVRARWTG 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIV 95 RL + LG FR E+L +H A L + L L S Sbjct: 61 RLPEQLGNFRLEMLHAHAAAFLDDAARLAALGSAC 95 >gi|34497524|ref|NP_901739.1| DNA repair protein RecO [Chromobacterium violaceum ATCC 12472] gi|42559446|sp|Q7NWC1|RECO_CHRVO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|34103379|gb|AAQ59741.1| DNA repair protein [Chromobacterium violaceum ATCC 12472] Length = 245 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 5/160 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 IL + Y E +++LEV++R +GR R+ + R + +L + ++W + Sbjct: 11 PGYILHTQPYRETSLLLEVLSRDHGRFSLVARSARRPRSDLRGVLLPFQPLTLSWFGKGE 70 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L+ + G + + +P + + + + Sbjct: 71 LRTLHAADWDGGVRA---LTGLPLVCGFYLNELMMKLTARDDPEPRAFSVYDRAVRELAG 127 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV 163 + + + EL L + +G+ L++ Sbjct: 128 GAPLSTALRRYELRLAQVLGYAPALSRDSRGEAIAADRHY 167 >gi|182438807|ref|YP_001826526.1| DNA repair protein RecO [Streptomyces griseus subsp. griseus NBRC 13350] gi|326779462|ref|ZP_08238727.1| DNA repair protein recO [Streptomyces cf. griseus XylebKG-1] gi|238689003|sp|B1VY58|RECO_STRGG RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|178467323|dbj|BAG21843.1| putative DNA recombination and repair protein RecO [Streptomyces griseus subsp. griseus NBRC 13350] gi|326659795|gb|EGE44641.1| DNA repair protein recO [Streptomyces cf. griseus XylebKG-1] Length = 248 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 75/190 (39%), Gaps = 14/190 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V V + + Sbjct: 4 FRDDGIVLRTQKLGEADRIITILTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 R + +G + E + + +++ +++ + E + Y + Sbjct: 64 RGGELVGRGLPLCTQSETIAPYGGGIVADYARYTAGTAMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + ++ LL+++ G+ C G+ + S +GG Sbjct: 124 LVGGLRTLARGEHAPHL--ILDAFLLRSLAVNGYAPSFEDCAKCGMPGPNRFFSVAAGGV 181 Query: 171 VCRSVGLPYA 180 +C +P + Sbjct: 182 ICGDCRVPGS 191 >gi|256787868|ref|ZP_05526299.1| DNA repair protein RecO [Streptomyces lividans TK24] gi|289771752|ref|ZP_06531130.1| DNA repair protein RecO [Streptomyces lividans TK24] gi|289701951|gb|EFD69380.1| DNA repair protein RecO [Streptomyces lividans TK24] Length = 251 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 81/211 (38%), Gaps = 14/211 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V V + S Sbjct: 7 FRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFS 66 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 + ++ +G + E + + +++ +++ + E + Y + Sbjct: 67 KGSELVGRGLPLCTQSETIAPYGGGIVTDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 126 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + ++ LL+++ G+ C G+ + S SGG+ Sbjct: 127 LVGALRTLARGEHAPNLV--LDAFLLRSLAVNGYAPTFGDCAKCGMPGPNRFFSVGSGGS 184 Query: 171 VCRSVGLPYAEKMLVLPSFLWKEEQTIDADS 201 VC +P + L T D + Sbjct: 185 VCVDCRVPGSVVPSPQALELLGALLTGDWGT 215 >gi|302518924|ref|ZP_07271266.1| DNA repair protein RecO [Streptomyces sp. SPB78] gi|318059906|ref|ZP_07978629.1| DNA repair protein RecO [Streptomyces sp. SA3_actG] gi|318076741|ref|ZP_07984073.1| DNA repair protein RecO [Streptomyces sp. SA3_actF] gi|333027247|ref|ZP_08455311.1| putative DNA repair protein RecO [Streptomyces sp. Tu6071] gi|302427819|gb|EFK99634.1| DNA repair protein RecO [Streptomyces sp. SPB78] gi|332747099|gb|EGJ77540.1| putative DNA repair protein RecO [Streptomyces sp. Tu6071] Length = 249 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 76/190 (40%), Gaps = 14/190 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR GR R + + + L+ + V V + + Sbjct: 4 FRDDGIVLRTQKLGEADRIITLLTRGQGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 R ++ +G + E + + +++ +++ E + Y + Sbjct: 64 RGSELIGRGLPLCTQSETIAPYGRHIVTDYSRYTAGTAMLETAERFTANEGEPAIQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L S + ++ LL+++ G+ C G+ + S SGGA Sbjct: 124 LVGGLRTLAEGSHAPALV--MDAFLLRSLAVNGYAPSFDACARCGLPGPNRFFSVSSGGA 181 Query: 171 VCRSVGLPYA 180 VC +P + Sbjct: 182 VCGDCRVPGS 191 >gi|261855984|ref|YP_003263267.1| DNA repair protein RecO [Halothiobacillus neapolitanus c2] gi|261836453|gb|ACX96220.1| DNA repair protein RecO [Halothiobacillus neapolitanus c2] Length = 241 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 74/229 (32%), Gaps = 8/229 (3%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQ 64 A +L R + + ++++E T +GR + R ++ + L+ ++ + + Sbjct: 2 TRAYVLHTRPWRDTSLLVEWFTEDFGRLTTYQRGARNRGKKSPLRPMAFQCLHMML-VGR 60 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + ++ + A LL G L R L +EP L+D+ L P Sbjct: 61 GDMKTATQIESAGRAHLLQGQSLAVGFYLNELLMRALHRQEPAPVLFDIYARHLAELAGP 120 Query: 125 SVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 SV V+ E LL +G G+D T D + Sbjct: 121 SVDFGTVVRGFERDLLAELGVGIDWQSTADTQEPIDQQAQYWLAPEEGILQHRGRGYPVA 180 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLREN 231 + + + DA + A L + L ++ R Sbjct: 181 GNILKAIADNQTLADAGDRRQARN-----LLQSLLAPHVGSAPFNSRAL 224 >gi|121635410|ref|YP_975655.1| DNA repair protein (recombination protein o) [Neisseria meningitidis FAM18] gi|120867116|emb|CAM10883.1| DNA repair protein (recombination protein o) [Neisseria meningitidis FAM18] gi|254671054|emb|CBA07920.1| DNA repair protein RecO [Neisseria meningitidis alpha153] gi|319411027|emb|CBY91426.1| DNA repair protein RecO (recombination protein O) [Neisseria meningitidis WUE 2594] gi|325132871|gb|EGC55549.1| DNA repair protein RecO [Neisseria meningitidis M6190] gi|325138816|gb|EGC61367.1| DNA repair protein RecO [Neisseria meningitidis ES14902] Length = 264 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 70/234 (29%), Gaps = 16/234 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L V +W Sbjct: 13 FLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASWYGSQELK 72 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 GL + + +P ELYD L + + Sbjct: 73 TLH---RAEWIGGWPQPQGRALFSGLYVNELMLKLTVREDPLPELYDALAEVMEAVCCKA 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV----CRSVGLPYAE 181 + E LL +G DL G AV + L + Sbjct: 130 AYIDDLRRFEWRLLNLLGVAPDLHADGTGGDILADKTYRLMPEEAVMPVCEDADALSHEA 189 Query: 182 KMLVLPSFLWK--EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +V L E A+SL+ A ++T F+ L + R+ Sbjct: 190 GAIVEGQSLIDLREGSFRTAESLQQALKITRLFI--RHLLPEGL---KSRQVLE 238 >gi|171704547|sp|A1KVH9|RECO_NEIMF RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|6449094|gb|AAF08823.1|AF194079_10 recO [Neisseria meningitidis] Length = 263 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 70/234 (29%), Gaps = 16/234 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L V +W Sbjct: 12 FLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASWYGSQELK 71 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 GL + + +P ELYD L + + Sbjct: 72 TLH---RAEWIGGWPQPQGRALFSGLYVNELMLKLTVREDPLPELYDALAEVMEAVCCKA 128 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV----CRSVGLPYAE 181 + E LL +G DL G AV + L + Sbjct: 129 AYIDDLRRFEWRLLNLLGVAPDLHADGTGGDILADKTYRLMPEEAVMPVCEDADALSHEA 188 Query: 182 KMLVLPSFLWK--EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +V L E A+SL+ A ++T F+ L + R+ Sbjct: 189 GAIVEGQSLIDLREGSFRTAESLQQALKITRLFI--RHLLPEGL---KSRQVLE 237 >gi|189425855|ref|YP_001953032.1| DNA repair protein RecO [Geobacter lovleyi SZ] gi|189422114|gb|ACD96512.1| DNA repair protein RecO [Geobacter lovleyi SZ] Length = 209 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 57/160 (35%), Gaps = 2/160 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSR 61 Q AIIL +YGE + I+ + T ++GR GF ++ + R L+ N + V R Sbjct: 5 QCQAIILSTLNYGESDRIVSLFTLEHGRLRGFAKSARASRKRFGGQLEPANRLAVTLSLR 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 R E + L + + PE P L+ +L+ Sbjct: 65 EDGLSRIERVEQSNCYPELRERLESLALALYACELVEALTPEGHPLPRLFRLLSTLFEHL 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLL 161 S E+ LL +G+ L + ++ L Sbjct: 125 AGQSGSPTDRRFFEMNLLNILGYRPALDTAALQPLSDCLK 164 >gi|20807456|ref|NP_622627.1| recombinational DNA repair protein [Thermoanaerobacter tengcongensis MB4] gi|20515981|gb|AAM24231.1| Recombinational DNA repair protein [Thermoanaerobacter tengcongensis MB4] Length = 257 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 74/193 (38%), Gaps = 3/193 (1%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW- 58 M + + +AI+L EK+ I + TR YG+ + + + + + + N+ Sbjct: 11 MRFLKTEAIVLKSNLISEKDKIATLFTRDYGKLQAVAKGARRSKSRFVNAVRPFIVANYV 70 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 ++E++++ F + R L E++ +LY L Sbjct: 71 IFEGQNYYYIDQWELVKNFENIEKDLKKFALASYISETISRVLEEKQKNTKLYFFTKHSL 130 Query: 119 NCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + +V IF+ L L+ +G+ L C V G ++L + S GGAVC+ Sbjct: 131 EAVESLNVETSIFLFSYTLKLISLLGYMPVLDSCAVCGKKENLSYFSSSCGGAVCKDCNE 190 Query: 178 PYAEKMLVLPSFL 190 + + L Sbjct: 191 TCKDAKFLNKKVL 203 >gi|114048419|ref|YP_738969.1| DNA repair protein RecO [Shewanella sp. MR-7] gi|113889861|gb|ABI43912.1| DNA repair protein RecO [Shewanella sp. MR-7] Length = 233 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 33/232 (14%), Positives = 67/232 (28%), Gaps = 12/232 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWRSRLAQ 64 +L R Y E + ++ ++ GR R ++ ILQ + + + Sbjct: 3 RGYVLHHRPYRESSALVNLLVDGIGRVDAVARVGSGKRSIKSILQPFQPLIFEFSGKSEL 62 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 ++ + A LS G+ L R L L+ + + L Sbjct: 63 KN---ISQIEAAAPAVPLSGYSLYAGMYINELLMRTLSVHHNAEALFLIYHQALVGLA-A 118 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 +EL LL+ +G L + + + A+ Sbjct: 119 QFCESKLRYLELALLRELGAMPSLIRDTQGEPLIPEHYYQLVPELGFQFVLN-SRAKHTY 177 Query: 185 VLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHL-LRENFLGK 235 + + + A + L + LQ + + L R+ F+ Sbjct: 178 QGAMLTALNDNQLLQEQFLEAKR-----LMRSMLQPLLGNKPLVSRQLFIQA 224 >gi|119370513|sp|Q9L2H3|RECO_STRCO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 248 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 81/211 (38%), Gaps = 14/211 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V V + S Sbjct: 4 FRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFS 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 + ++ +G + E + + +++ +++ + E + Y + Sbjct: 64 KGSELVGRGLPLCTQSETIAPYGGGIVTDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + ++ LL+++ G+ C G+ + S SGG+ Sbjct: 124 LVGALRTLARGEHAPTLV--LDAFLLRSLAVNGYAPTFGDCAKCGMPGPNRFFSVGSGGS 181 Query: 171 VCRSVGLPYAEKMLVLPSFLWKEEQTIDADS 201 VC +P + L T D + Sbjct: 182 VCVDCRVPGSVVPSPQALELLGALLTGDWGT 212 >gi|21220971|ref|NP_626750.1| DNA repair protein RecO [Streptomyces coelicolor A3(2)] gi|6752353|emb|CAB69731.1| conserved hypothetical protein SCC121.13c [Streptomyces coelicolor A3(2)] Length = 251 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 81/211 (38%), Gaps = 14/211 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR +GR R + + + L+ + V V + S Sbjct: 7 FRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFS 66 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 + ++ +G + E + + +++ +++ + E + Y + Sbjct: 67 KGSELVGRGLPLCTQSETIAPYGGGIVTDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 126 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + ++ LL+++ G+ C G+ + S SGG+ Sbjct: 127 LVGALRTLARGEHAPTLV--LDAFLLRSLAVNGYAPTFGDCAKCGMPGPNRFFSVGSGGS 184 Query: 171 VCRSVGLPYAEKMLVLPSFLWKEEQTIDADS 201 VC +P + L T D + Sbjct: 185 VCVDCRVPGSVVPSPQALELLGALLTGDWGT 215 >gi|313667834|ref|YP_004048118.1| DNA repair protein (recombination protein o) [Neisseria lactamica ST-640] gi|313005296|emb|CBN86729.1| DNA repair protein (recombination protein o) [Neisseria lactamica 020-06] Length = 263 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 70/234 (29%), Gaps = 16/234 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L V +W Sbjct: 12 FMLASSPWRESSLWVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASWYGSQELK 71 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 V GL + + +P ELYD L + + Sbjct: 72 TLHRAEWVGGWRQP---QGRALFGGLYVNELVLKLTAREDPVPELYDALAEVMEAVCCKA 128 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL----PYAE 181 + E LL +G DL + G + AV P+A Sbjct: 129 AYIDDLRRFEWRLLNLLGVAPDLNRDGDGGTIAAGGTYLVRPETAVFPVGKGFAVPPHAA 188 Query: 182 KMLVLPSFLWK--EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 ++ L SL+ A ++T F+ L + R+ Sbjct: 189 GVVAPGQSLIDLRAGSFGSGQSLQDALKITRLFI--RHLLPEGL---KSRQVLE 237 >gi|113971181|ref|YP_734974.1| DNA repair protein RecO [Shewanella sp. MR-4] gi|113885865|gb|ABI39917.1| DNA repair protein RecO [Shewanella sp. MR-4] Length = 233 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 33/232 (14%), Positives = 67/232 (28%), Gaps = 12/232 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWRSRLAQ 64 +L R Y E + ++ ++ GR R ++ ILQ + + + Sbjct: 3 RGYVLHHRPYRESSALVNLLVDGIGRVDAIARVGSGKRSIKSILQPFQPLIFEFSGKSEL 62 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 ++ + A LS G+ L R L L+ + + L Sbjct: 63 KN---ISQIEAAAPAVPLSGYSLYAGMYINELLMRTLSVHHNAEALFLIYHQALVGLA-A 118 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 +EL LL+ +G L + + + A+ Sbjct: 119 QFCESKLRYLELALLRELGAMPSLIRDTQGEPLIPEHYYQLVPELGFQFVLN-SRAKHTY 177 Query: 185 VLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHL-LRENFLGK 235 + + + A + L + LQ + + L R+ F+ Sbjct: 178 QGAMLTALNDNQLLQEQFLEAKR-----LMRSMLQPLLGNKPLVSRQLFIQA 224 >gi|83644634|ref|YP_433069.1| DNA repair protein RecO [Hahella chejuensis KCTC 2396] gi|123534040|sp|Q2SL30|RECO_HAHCH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|83632677|gb|ABC28644.1| DNA repair protein RecO [Hahella chejuensis KCTC 2396] Length = 238 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 79/236 (33%), Gaps = 15/236 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM-QPILQAGNLVRVNWRSRLAQN 65 A +L R Y E + I++++T G+ ++ G + LQ + V R Sbjct: 9 AYVLHSRPYRESSYIVDLITEADGKASAVLKGGGRRKGVPGTLQPFTELEVELGGRGELK 68 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + L+ + GL L + L E C +++D L +P Sbjct: 69 SLIRYETTNIRYP---LAGAALYAGLYLNELLVKLLQPLEGCRKVFDAYKSSLTFLSLPQ 125 Query: 126 VI-GKIFVQIELMLLKNIGFGLDLTKCVVT---GVTQDLLWVSPKSGGAVCRSVGLPYAE 181 ++E LL +GFG+D CV + + ++ + V R+ P + Sbjct: 126 PNLEPGIRELEFALLNELGFGVDF--CVESATGDIVKNNIAYYFSLTEGVSRTP-EPCSV 182 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 + SL +A +LT L+ + RE L Sbjct: 183 VIEGHHLIAIAGRDWSVPGSLSAAKRLTRRCLD----ELLGGRPLHSRELMRSYLK 234 >gi|24372928|ref|NP_716970.1| DNA repair protein RecO [Shewanella oneidensis MR-1] gi|24347064|gb|AAN54415.1|AE015579_4 DNA repair protein RecO [Shewanella oneidensis MR-1] Length = 233 Score = 93.3 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 33/232 (14%), Positives = 67/232 (28%), Gaps = 12/232 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWRSRLAQ 64 +L R Y E + ++ ++ GR R ++ ILQ + + + Sbjct: 3 RGYVLHHRPYRESSALVNLLVDGIGRVDAVARVGSGKRSIKSILQPFQPLIFEFSGKSEL 62 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 ++ + A LS G+ L R L + L+ + + L Sbjct: 63 KN---ISQIEAAAPAVPLSGYSLYAGMYINELLMRTLSVQHNAEALFFIYHQALVGLA-A 118 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 +EL LL+ +G L + + A+ Sbjct: 119 QFCESKLRYLELALLRELGAMPSLIRDTQGEPLIPEHCYQLVPELGFQFVLN-SRAKHTY 177 Query: 185 VLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHL-LRENFLGK 235 + + + A + L + LQ + + L R+ F+ Sbjct: 178 QGAMLTALNDNQLLQEQFLEAKR-----LMRSMLQPLLGNKPLVSRQLFIQA 224 >gi|270283981|ref|ZP_05965342.2| DNA repair protein RecO [Bifidobacterium gallicum DSM 20093] gi|270277851|gb|EFA23705.1| DNA repair protein RecO [Bifidobacterium gallicum DSM 20093] Length = 258 Score = 93.3 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 71/205 (34%), Gaps = 6/205 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D+ I+L GE + ++ ++TR +G+ + + + + L+ V + Sbjct: 22 YRDEGIVLRTMKLGEADRVITLLTRDHGKVRAVAKGVRRTKSRFGARLEPFMRVDLLLNE 81 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + E + + + + IV + L E + Sbjct: 82 -GRTFDAIRQAESVSVYAGAITADYDRYRAATIIVEVINDLASTEHEPVGAQYPLLAGAL 140 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + + + + +L+ I G+ L CVV G L S +SGG +C + Sbjct: 141 NALATARHEPELISNSYVLRAIAMAGWTPRLDSCVVCGRVDQLTHFSARSGGVMCATDRT 200 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSL 202 P A ++ D +L Sbjct: 201 PDAIRIQPAERLQLIALLAGDWAAL 225 >gi|257869128|ref|ZP_05648781.1| DNA repair protein recO [Enterococcus gallinarum EG2] gi|257803292|gb|EEV32114.1| DNA repair protein recO [Enterococcus gallinarum EG2] Length = 260 Score = 93.3 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 60/193 (31%), Gaps = 3/193 (1%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M + I+L R + EK+ ++++ T G+ + +V+ + + Sbjct: 3 MNLVETKGILLFTRDHKEKDKLVKIFTESAGKQMFYVKGAHRKNNPLTPALLSYTEATYI 62 Query: 60 S--RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 R + + S L Y + + +R LY L+ Sbjct: 63 GNIRSEGLSFLNNAKDIHSFRKIQGDIFLAGYATYLLNLADSAIDDRVYDPNLYHFLHEA 122 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + I E+ LL+ G T C V G T+ S K G +C Sbjct: 123 LQLMDTDNDAEIITNIFEIQLLQRFGVSPIWTHCAVCGQTEGRFDYSSKYNGVICEKHWA 182 Query: 178 PYAEKMLVLPSFL 190 + P + Sbjct: 183 LDDHRYHGDPRAI 195 >gi|90416442|ref|ZP_01224373.1| DNA repair protein recO (Recombination protein O) [marine gamma proteobacterium HTCC2207] gi|90331641|gb|EAS46869.1| DNA repair protein recO (Recombination protein O) [marine gamma proteobacterium HTCC2207] Length = 242 Score = 93.3 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 53/153 (34%), Gaps = 7/153 (4%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI---LQAGNLVRV 56 M + + +L Y + ++++++ T +GR + + Q I + Sbjct: 1 MRIEAEPGFLLHSTPYRDTSLLVDLYTANHGRVRCVAKGFRKPNKQGINRSIFPYTEHHF 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 +W+ R + L GL +R L E++ LY Sbjct: 61 SWQGRGELKT---LTKADVVQAPVFLKQECLFTGLYINELFYRLLQEQDIHQYLYQQYQQ 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLT 149 F+ Q+E+ LL+ +G+GL L Sbjct: 118 FMAILCGAQPDEVHLRQLEMTLLEELGYGLVLD 150 >gi|117921463|ref|YP_870655.1| DNA repair protein RecO [Shewanella sp. ANA-3] gi|117613795|gb|ABK49249.1| DNA repair protein RecO [Shewanella sp. ANA-3] Length = 233 Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 33/232 (14%), Positives = 67/232 (28%), Gaps = 12/232 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWRSRLAQ 64 +L R Y E + ++ ++ GR R ++ ILQ + + + Sbjct: 3 RGYVLHHRPYRESSALVNLLVDGIGRVDAVARVGSGKRSIKSILQPFQPLIFEFSGKSEL 62 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 ++ + A LS G+ L R L L+ + + L Sbjct: 63 KN---ISQIEAAAPAVPLSGYSLYAGMYINELLMRILSVHHNAEALFLIYHQALVGLA-A 118 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 +EL LL+ +G L + + + A+ Sbjct: 119 QFCESKLRYLELALLRELGAMPSLIRDTQGEPLIPEHYYQLVPELGFQFVLN-SRAKHTY 177 Query: 185 VLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHL-LRENFLGK 235 + + + A + L + LQ + + L R+ F+ Sbjct: 178 QGAMLTALNDNQLLQEQFLEAKR-----LMRSMLQPLLGNKPLVSRQLFIQA 224 >gi|253996998|ref|YP_003049062.1| DNA repair protein RecO [Methylotenera mobilis JLW8] gi|253983677|gb|ACT48535.1| DNA repair protein RecO [Methylotenera mobilis JLW8] Length = 248 Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 77/239 (32%), Gaps = 19/239 (7%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++++E+ +R++GR + + R + +LQA + W +L Sbjct: 15 YVLHTYPFKETSLVVELFSREFGRVATTAKGARRPRSAMRGMLQAFQPMLATWSGKLELK 74 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + C LL + G L R LP +P L+ L Sbjct: 75 TLH---GLEWNGCLLLLQGEALMCGFYLNELLLRLLPREDPHEALFAYYAETLKALASEQ 131 Query: 126 VIGKIFVQIELMLLKNIGFG--LDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + + EL L+ +G+ L L V Q + G R Y + Sbjct: 132 HLATTLRRFELKFLQELGYAIPLQLDVNNTPIVMQQAYRYEAEHGAYPIRCASARYETRY 191 Query: 184 LVL------PSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 + D + + + Q L +Y L H + R+ + Sbjct: 192 ENGVQLSGKTLIDMLHDDYSDEQTQQQSKQ-----LMRYLLAHYLGDKPLHTRQLLIEL 245 >gi|85860059|ref|YP_462261.1| DNA repair protein [Syntrophus aciditrophicus SB] gi|85723150|gb|ABC78093.1| DNA repair protein [Syntrophus aciditrophicus SB] Length = 277 Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 61/159 (38%), Gaps = 3/159 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR 61 + + +L SY + ++I+ TR +G+ R + R + +L+ + + + Sbjct: 26 KTEGFVLKTLSYSDSDLIVTFYTRNFGKLTAIARGARKSRKRFVNVLEPFCCSSLLFSRK 85 Query: 62 LAQNLGEFRFEVLESHCAKLL-SSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + + ++ S L I + F E +P EL+++L FL Sbjct: 86 QRDQLAWLESCQVINEFPEIRKSLDRTLLASYLIDLVDHFSIEEKPGRELFELLRSFLLL 145 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 + ++ E+ LK G+ L C++ + Sbjct: 146 IEEGDTSERLLRFFEIRHLKLTGYAPALDCCMICKAPLN 184 >gi|257886867|ref|ZP_05666520.1| recombination protein O [Enterococcus faecium 1,141,733] gi|293568653|ref|ZP_06679968.1| DNA repair protein RecO [Enterococcus faecium E1071] gi|293571623|ref|ZP_06682644.1| DNA repair protein RecO [Enterococcus faecium E980] gi|257822921|gb|EEV49853.1| recombination protein O [Enterococcus faecium 1,141,733] gi|291588613|gb|EFF20446.1| DNA repair protein RecO [Enterococcus faecium E1071] gi|291608293|gb|EFF37594.1| DNA repair protein RecO [Enterococcus faecium E980] Length = 272 Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 61/186 (32%), Gaps = 2/186 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +IL R+Y EK+ ++++ T G+ + +++ + P L R Sbjct: 6 ESKGLILSSRNYKEKDKLVKIFTESSGKMMFYIKGIHRQNQPLAPALLPFTEAVYIGNFR 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + + L YG + + + + + L+ L Sbjct: 66 SEGLSFLSSVKDVHAFRHIQEDIFLSGYGTYLLNLVDAAIEDHQYDPHLFQFTQQALQRM 125 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I E+ +L+ G T CVV G T+ S K GG +C Sbjct: 126 DQGDDAEIITNIFEVQILQRFGIAPIWTHCVVCGETKGKFDYSSKYGGVICERHWSMDDH 185 Query: 182 KMLVLP 187 + P Sbjct: 186 RYHADP 191 >gi|56478592|ref|YP_160181.1| DNA repair protein RecO [Aromatoleum aromaticum EbN1] gi|62287380|sp|Q5P084|RECO_AZOSE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|56314635|emb|CAI09280.1| DNA repair protein recO (Recombination protein O) [Aromatoleum aromaticum EbN1] Length = 239 Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 55/148 (37%), Gaps = 6/148 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSR 61 Q A +L + E ++++E+ +R +GR + + ++ ++ A + ++W Sbjct: 9 QQPAFVLHTYPWRETSLVVEIFSRDHGRVALVAKGARRPMSALRGVIMAFQPLLMDWSGG 68 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 LL+ + G L R + L++ L+ Sbjct: 69 GEVKT---LVRAEWRGGQPLLTGRALMCGYYLNELLVRLTAREDAHPALFEAYADALSQL 125 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLT 149 V I + EL LL+ +G+G+ L Sbjct: 126 GRGDVAP-ILRRFELTLLRELGYGIGLD 152 >gi|269218573|ref|ZP_06162427.1| DNA repair protein RecO [Actinomyces sp. oral taxon 848 str. F0332] gi|269211684|gb|EEZ78024.1| DNA repair protein RecO [Actinomyces sp. oral taxon 848 str. F0332] Length = 243 Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 36/228 (15%), Positives = 79/228 (34%), Gaps = 14/228 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D+AI+L GE + I+ +R++G+ G + + + + L+ ++V + Sbjct: 4 YRDEAIVLRTHDLGEADRIITFFSRRHGKMRGVAKGVRRTKSRFGARLEPFSMVDLQLYE 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 ++ L + + I + L E + L + Sbjct: 64 GRTLDV-VTEAATLNPYGRSIGRDYDAYTCACVIAEVADKLAAIEEEPDQAHYLLLHGAI 122 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 H + + + + ++ +L+ + G+GL L +C V G + L +SGG VC Sbjct: 123 HALATGAHRPALVVDSYILRAMALHGWGLSLYECAVCGRGEGLAAFHLQSGGVVCSDCAP 182 Query: 178 PYAEKMLVLPSFLWKE--------EQTIDADSLKSAFQLTDYFLNKYA 217 A L ++A + +L + Sbjct: 183 RAAAYPAPETIELLGSLVSGRWDVADAAAEHDRRAASAIVGAYLQWHV 230 >gi|257898047|ref|ZP_05677700.1| recombination protein O [Enterococcus faecium Com15] gi|257835959|gb|EEV61033.1| recombination protein O [Enterococcus faecium Com15] Length = 270 Score = 93.0 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 61/186 (32%), Gaps = 2/186 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +IL R+Y EK+ ++++ T G+ + +++ + P L R Sbjct: 6 ESKGLILSSRNYKEKDKLVKIFTESSGKMMFYIKGIHRQNQPLAPALLPFTEAVYIGNFR 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + + L YG + + + + + L+ L Sbjct: 66 SEGLSFLSSVKDVHAFRHIQEDIFLSGYGTYLLNLVDAAIEDHQYDPHLFQFTQQALQRM 125 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I E+ +L+ G T CVV G T+ S K GG +C Sbjct: 126 DQGDDAEIITNIFEVQILQRFGIAPIWTHCVVCGETKGKFDYSSKYGGVICERHWSMDDH 185 Query: 182 KMLVLP 187 + P Sbjct: 186 RYHADP 191 >gi|308069927|ref|YP_003871532.1| DNA repair protein RecO [Paenibacillus polymyxa E681] gi|305859206|gb|ADM70994.1| DNA repair protein recO (Recombination protein O) [Paenibacillus polymyxa E681] Length = 250 Score = 93.0 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 62/191 (32%), Gaps = 4/191 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M ++ + I++ YGE N I+ + T G+ VR + + + + Q + Sbjct: 1 MLYRVEGIVIRSMDYGEGNKIITLCTESGGKAGVLVRGAKKSKSRHAALTQPFTYGEFVF 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R E+++SH + Y + L R L + E + L L Sbjct: 61 F-RNTGLGTLNAGEIIQSHHTLREDITKAAYASYACELLDRVLQDEETGAFWFKQLKACL 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVCRSVGL 177 + + E +L+ G+ L C+ +G D G V Sbjct: 120 EALESGKDPLIVMSIYEFKILQAAGYAPQLDACISSGQQCADEDMFVSPRLGGVLCRSYK 179 Query: 178 PYAEKMLVLPS 188 + L + Sbjct: 180 HFDPAALSVTP 190 >gi|294787447|ref|ZP_06752700.1| DNA repair protein RecO [Parascardovia denticolens F0305] gi|315226983|ref|ZP_07868770.1| recombinational DNA repair protein (RecF pathway) [Parascardovia denticolens DSM 10105] gi|294484803|gb|EFG32438.1| DNA repair protein RecO [Parascardovia denticolens F0305] gi|315119433|gb|EFT82566.1| recombinational DNA repair protein (RecF pathway) [Parascardovia denticolens DSM 10105] Length = 248 Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 76/210 (36%), Gaps = 8/210 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D ++L GE + I+ ++T ++G+ R + R + L+ + Sbjct: 4 YRDQGLVLRAIKLGETDRIITILTSRHGKIRAVARGVRRTRSRFGSRLEPFMRDDLLIAQ 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC--LELYDMLNIFL 118 + + V+ ++ K+++ IV + + + + Sbjct: 64 GRKELDTVSQAVVISAYAPKIVADYEAYLSASVIVEAVDKVVSDLREGSESAHRQYLLAV 123 Query: 119 NCHKIPSVIGKIFVQIELMLL----KNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + + +E L G+ L C+V G DL + S +SGG +C+ Sbjct: 124 GALAALAAGKRPPALVENSFLLRSVSLAGWTPRLDSCLVCGRQTDLTYFSVESGGVMCKD 183 Query: 175 VGLPYAEKMLVLPSFLWKEEQTIDADSLKS 204 +P + ++ F + D +L++ Sbjct: 184 DHVPGSRRLSPQALFQLRALLMGDWKALEA 213 >gi|325136835|gb|EGC59433.1| DNA repair protein RecO [Neisseria meningitidis M0579] Length = 248 Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 71/234 (30%), Gaps = 16/234 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L V V+W Sbjct: 13 FLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSVSWYGSQELK 72 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 GL + + +P ELYD L + + Sbjct: 73 TLH---RAEWIGGWPQPQGRALFSGLYVNELVLKLTAREDPMPELYDALAKVMEAVCREA 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV----CRSVGLPYAE 181 + E LL +G DL G AV + L + Sbjct: 130 NHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVCEDADALSHEA 189 Query: 182 KMLVLPSFLWK--EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +V L E A+SL+ A ++T F+ L + R+ Sbjct: 190 GAIVEGQSLIDLREGSFRTAESLQQALKITRLFI--RHLLPEGL---KSRQVLE 238 >gi|126667177|ref|ZP_01738151.1| DNA repair protein RecO [Marinobacter sp. ELB17] gi|126628333|gb|EAZ98956.1| DNA repair protein RecO [Marinobacter sp. ELB17] Length = 239 Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 72/239 (30%), Gaps = 15/239 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 Q+ ++ R + E ++ ++V T YGR R + + + LQ+ + ++W Sbjct: 6 IQEPGYVIHRRPWRETSLQVDVFTLNYGRVDLIARGASTSKSPLKAQLQSFQPLLLDWVG 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R H L S G L R LP +P L+ + Sbjct: 66 RGGLKTLTQVDVR---HAPVLAQSQALFSGFYLNELLQRILPAADPYPLLFAAYLDAMAE 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDL----TKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + + E L +G+ C Q + + G Sbjct: 123 LAAAAELEPVLRRFERSLALALGYDFAWDLATDSCA---PVQSGWFYGYHPQQGIVERPG 179 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 K L + L + + + L Y LQ +H R+ F+ Sbjct: 180 ADVRVKKLRGDALLALAANDYSEIEARRSAKRVMRALVDYLLQGRPLH---SRQLFIQS 235 >gi|23099405|ref|NP_692871.1| DNA repair protein RecO [Oceanobacillus iheyensis HTE831] gi|42559473|sp|Q8CXD4|RECO_OCEIH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|22777634|dbj|BAC13906.1| DNA repair protein (recombination protein O) [Oceanobacillus iheyensis HTE831] Length = 258 Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 61/177 (34%), Gaps = 1/177 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + D II+ + YGE + ++ + + + G+ + + + + + + Sbjct: 1 MLEKIDGIIIKTKDYGETHKLVTIFSNKIGKFNALAKGAKKPKSRMAAVTQPFINARFFV 60 Query: 61 R-LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + EVL+S Y + L +E LY+ L Sbjct: 61 YIGSGLSTIQQGEVLDSFRIIREDIFKTAYVSYMAELTDKLLDAKENDPFLYEQFYQTLL 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + EL L K GF L +C G + L S + GG +C+ Sbjct: 121 WINNQDEVDIPVIMYELKLYKKAGFAPVLHQCSRCGNQEGLSKFSIREGGMLCQQCA 177 >gi|148549492|ref|YP_001269594.1| DNA repair protein RecO [Pseudomonas putida F1] gi|166221906|sp|A5W8F0|RECO_PSEP1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|148513550|gb|ABQ80410.1| DNA replication and repair protein RecO [Pseudomonas putida F1] Length = 227 Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 76/231 (32%), Gaps = 12/231 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R+Y E + +++ T GR +R + + +++ L+ + R R Sbjct: 8 PAYVLHSRAYKETSALVDFFTP-QGRMRAVLRRARG-KGGSLVRPFVLLELELRGRGELK 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + S A L GL L R LP P +++ + L Sbjct: 66 N---VGRMDSSGIAAWLHGDALFSGLYLNELLMRLLPAEAPFPAIFEHYTLTLQALAEGR 122 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + + E LL +G+ L++ V + A V L Sbjct: 123 PLEPLLRSFEWRLLDELGYAFSLSQDVNDQPIAADGLYRLR-VDAGLERVELLQPGLFRG 181 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHL-LRENFLGK 235 + E +L +A + L + AL ++ L RE F + Sbjct: 182 IELLALAEADWDAPGALLAAKR-----LMRQALAVHLGAKPLVSRELFRKR 227 >gi|119361493|sp|Q2LVI1|RECO_SYNAS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 259 Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 61/159 (38%), Gaps = 3/159 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR 61 + + +L SY + ++I+ TR +G+ R + R + +L+ + + + Sbjct: 8 KTEGFVLKTLSYSDSDLIVTFYTRNFGKLTAIARGARKSRKRFVNVLEPFCCSSLLFSRK 67 Query: 62 LAQNLGEFRFEVLESHCAKLL-SSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L + + ++ S L I + F E +P EL+++L FL Sbjct: 68 QRDQLAWLESCQVINEFPEIRKSLDRTLLASYLIDLVDHFSIEEKPGRELFELLRSFLLL 127 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 + ++ E+ LK G+ L C++ + Sbjct: 128 IEEGDTSERLLRFFEIRHLKLTGYAPALDCCMICKAPLN 166 >gi|26988168|ref|NP_743593.1| DNA repair protein RecO [Pseudomonas putida KT2440] gi|38258497|sp|Q88MY3|RECO_PSEPK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|24982902|gb|AAN67057.1|AE016334_6 DNA repair protein RecO [Pseudomonas putida KT2440] Length = 227 Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 75/231 (32%), Gaps = 12/231 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R+Y E + +++ T GR +R +S + +++ + V R R Sbjct: 8 PAYVLHSRAYKETSALVDFFTP-QGRMRAVLRRARS-KGGSLVRPFVSLEVELRGRGELK 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + A L GL L R LP P +++ + L Sbjct: 66 N---VSRMDSTGIAAWLHGDALFSGLYLNELLMRLLPAEAPFPTIFEHYTLTLQALAEGR 122 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + + E LL +G+ L + V + A V L Sbjct: 123 PLEPLLRSFEWRLLDELGYAFSLNQDVNDQPIAADGLYRLR-VDAGLERVELLQPGLFRG 181 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHL-LRENFLGK 235 + E +L +A + L + AL ++ L RE F + Sbjct: 182 IELLALAEADWDAPGALLAAKR-----LMRQALAVHLGAKPLVSRELFRKR 227 >gi|254805524|ref|YP_003083745.1| DNA repair protein RecO [Neisseria meningitidis alpha14] gi|254669066|emb|CBA07573.1| DNA repair protein RecO [Neisseria meningitidis alpha14] Length = 248 Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 71/234 (30%), Gaps = 16/234 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L V +W Sbjct: 13 FLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASWYGSQELK 72 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + GL + + +P ELYD L + + Sbjct: 73 TLHRAEWIGGWRQP---QGRALFSGLYVNELVLKLTAREDPMPELYDALAKVMEAVCREA 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV----CRSVGLPYAE 181 + E LL +G DL G AV + L + Sbjct: 130 NHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVCEDADALSHEA 189 Query: 182 KMLVLPSFLWK--EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +V L E A+SL+ A ++T F+ L + R+ Sbjct: 190 GAIVEGQSLIDLREGSFRTAESLQQALKITRLFI--RHLLPEGL---KSRQVLE 238 >gi|254392569|ref|ZP_05007746.1| DNA repair protein recO [Streptomyces clavuligerus ATCC 27064] gi|294812537|ref|ZP_06771180.1| DNA repair protein recO [Streptomyces clavuligerus ATCC 27064] gi|326441010|ref|ZP_08215744.1| DNA repair protein RecO [Streptomyces clavuligerus ATCC 27064] gi|197706233|gb|EDY52045.1| DNA repair protein recO [Streptomyces clavuligerus ATCC 27064] gi|294325136|gb|EFG06779.1| DNA repair protein recO [Streptomyces clavuligerus ATCC 27064] Length = 248 Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 76/190 (40%), Gaps = 14/190 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD ++L + GE + I+ ++TR +GR R + + + L+ + V V + + Sbjct: 4 FRDDGVVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSRFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 R ++ +G + E + + +++ +++ + E + Y + Sbjct: 64 RGSELVGRGLPLCTQSETIAPYGGGIVTDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + ++ LL+++ G+ C G+ + S +GG Sbjct: 124 LVGGLRALSRGEHAPHLV--LDAFLLRSLAVNGYAPSFDACARCGLPGPNRFFSVAAGGV 181 Query: 171 VCRSVGLPYA 180 +C +P + Sbjct: 182 ICGDCRVPGS 191 >gi|284990196|ref|YP_003408750.1| DNA repair protein RecO [Geodermatophilus obscurus DSM 43160] gi|284063441|gb|ADB74379.1| DNA repair protein RecO [Geodermatophilus obscurus DSM 43160] Length = 263 Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 72/203 (35%), Gaps = 6/203 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D+ I+L + GE + I+ V+TR++G+ + + + + L+ + V + + + Sbjct: 9 YRDEGIVLRTQKLGEADRIVTVLTRRHGKVRAVAKGVRRTKSKFGARLEPFSHVDLQFYT 68 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 ++ + ++ +++ +++ L E L L + Sbjct: 69 GRTLDIVSQAES-IRAYGQSIVTDYPAYTAGTAVLETADRLTAEEKEPSLRLFLLVIGAL 127 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + ++ LL+ + G+ L C G S +GG VC Sbjct: 128 RALSERTHPAGLVLDAFLLRAMSVAGWEPALGGCARCGEEGPHRHFSVPAGGMVCPPCRP 187 Query: 178 PYAEKMLVLPSFLWKEEQTIDAD 200 + L T D D Sbjct: 188 TGSAMPNPATVELLDALLTGDWD 210 >gi|227551967|ref|ZP_03982016.1| recombination protein RecO [Enterococcus faecium TX1330] gi|257895441|ref|ZP_05675094.1| recombination protein O [Enterococcus faecium Com12] gi|293378308|ref|ZP_06624477.1| DNA repair protein RecO [Enterococcus faecium PC4.1] gi|227178872|gb|EEI59844.1| recombination protein RecO [Enterococcus faecium TX1330] gi|257832006|gb|EEV58427.1| recombination protein O [Enterococcus faecium Com12] gi|292643172|gb|EFF61313.1| DNA repair protein RecO [Enterococcus faecium PC4.1] Length = 272 Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 61/186 (32%), Gaps = 2/186 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +IL R+Y EK+ ++++ T G+ + +++ + P L R Sbjct: 6 ESKGLILSSRNYKEKDKLVKIFTESSGKMMFYIKGIHRQNQPLAPALLPFTEAVYIGNFR 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + + L YG + + + + + L+ L Sbjct: 66 SEGLSFLSSVKDVHAFRHIQEDIFLSGYGTYLLNLVDAAIEDHQYDPHLFQFTQQALQRM 125 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I E+ +L+ G T CVV G T+ S K GG +C Sbjct: 126 DQGDDAEIITNIFEVQILQRFGITPIWTHCVVCGETKGKFDYSSKYGGVICERHWSMDDH 185 Query: 182 KMLVLP 187 + P Sbjct: 186 RYHADP 191 >gi|90407381|ref|ZP_01215566.1| DNA repair protein RecO [Psychromonas sp. CNPT3] gi|90311532|gb|EAS39632.1| DNA repair protein RecO [Psychromonas sp. CNPT3] Length = 240 Score = 92.6 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 36/234 (15%), Positives = 73/234 (31%), Gaps = 16/234 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQ 64 A IL R Y E +++L++ + G+ + G+S + Q L++ + R + Sbjct: 8 AFILHRRPYRETSLLLDLFCQDIGKVSLIYKGGRSSTRLRRGCAQPFTLLQATYFGRSSL 67 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH--- 121 + + L + L+R L C L+ L Sbjct: 68 KTVKSIEAKTQVVP---LVGERLYMAMYVNELLYRLLQAETACDGLFSCYQDTLLALAGA 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVV-TGVTQDLLWVSPKSGGAVCRSVGLPYA 180 K EL LL+++G+G++ T+ + + + + Sbjct: 125 KDNQHAQIALRNFELTLLESLGYGVNFTQDIYSDELIEPGFDYQYLQQQGFFAKQAIHQK 184 Query: 181 EKMLVLPSFLWKEEQTIDADSLKS-AFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + E+ S A + + AL H + + R F Sbjct: 185 QHVYSGLQIQALAERNFSNAEFLSPAKRFC-----RQALAHLLGNKPLHSRRLF 233 >gi|257882781|ref|ZP_05662434.1| recombination protein O [Enterococcus faecium 1,231,502] gi|257884089|ref|ZP_05663742.1| recombination protein O [Enterococcus faecium 1,231,501] gi|294622999|ref|ZP_06701888.1| DNA repair protein RecO [Enterococcus faecium U0317] gi|257818439|gb|EEV45767.1| recombination protein O [Enterococcus faecium 1,231,502] gi|257819927|gb|EEV47075.1| recombination protein O [Enterococcus faecium 1,231,501] gi|291597555|gb|EFF28717.1| DNA repair protein RecO [Enterococcus faecium U0317] Length = 270 Score = 92.6 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 61/186 (32%), Gaps = 2/186 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +IL R+Y EK+ ++++ T G+ + +++ + P L R Sbjct: 6 ESKGLILSSRNYKEKDKLVKIFTESSGKMMFYIKGIHRQNQPLAPALLPFTEAVYIGNFR 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + + L YG + + + + + L+ L Sbjct: 66 SEGLSFLSSVKDVHAFRNIQEDIFLSGYGTYLLNLVDAAIEDHQYDPHLFQFTQQALQRM 125 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I E+ +L+ G T CVV G T+ S K GG +C Sbjct: 126 DQGDDAEIITNIFEVQILQRFGIAPIWTHCVVCGETKGKFDYSSKYGGVICERHWSMDDH 185 Query: 182 KMLVLP 187 + P Sbjct: 186 RYHADP 191 >gi|74318102|ref|YP_315842.1| DNA repair protein RecO [Thiobacillus denitrificans ATCC 25259] gi|90103526|sp|Q3SH52|RECO_THIDA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|74057597|gb|AAZ98037.1| Recombination protein O, RecO [Thiobacillus denitrificans ATCC 25259] Length = 256 Score = 92.6 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 56/186 (30%), Gaps = 14/186 (7%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSR 61 + IL + E +++ EV TR +GR R + + ++Q + + ++W + Sbjct: 17 NESGFILHTYPFKETSVVAEVFTRAHGRVALIARGARRPASALRGLMQPFSPLLLSWFGK 76 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + G L R L + LYD L+ Sbjct: 77 ADLKTLHAAEWQGGLVAP---QGRALMCGFYLNELLLRLLARGDAHERLYDRYVETLDQL 133 Query: 122 ---------KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + + +I + E LL IG+G + + Sbjct: 134 ARSAAASDAERATAFERILRRFEKNLLSEIGYGATFDVEAGGAAIEPGAAYVFQPERGAL 193 Query: 173 RSVGLP 178 R+ G P Sbjct: 194 RAAGQP 199 >gi|297194472|ref|ZP_06911870.1| DNA repair protein recO [Streptomyces pristinaespiralis ATCC 25486] gi|197718717|gb|EDY62625.1| DNA repair protein recO [Streptomyces pristinaespiralis ATCC 25486] Length = 248 Score = 92.6 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 76/190 (40%), Gaps = 14/190 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD ++L + GE + I+ ++TR +GR R + + + L+ + V V + + Sbjct: 4 FRDDGVVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 R ++ +G + E + + +++ +++ + E + Y + Sbjct: 64 RGSELVGRGLPLCTQSETIAPYGGGIVTDYARYTAGTAMLETAERFADHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + ++ LL+++ G+ C G+ + S +GG Sbjct: 124 LVGGLRSLSRGEHAPHLV--LDAFLLRSLAVNGYAPSFDDCARCGLPGPNRFFSVAAGGV 181 Query: 171 VCRSVGLPYA 180 +C +P + Sbjct: 182 ICGDCRVPGS 191 >gi|325128807|gb|EGC51667.1| DNA repair protein RecO [Neisseria meningitidis N1568] Length = 264 Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 70/234 (29%), Gaps = 16/234 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L V +W Sbjct: 13 FLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASWYGSQELK 72 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 GL + + +P ELYD L + + Sbjct: 73 TLHRAEWGGGWRQP---QGRALFSGLYVNELVLKLTAREDPMPELYDALAKVMEAVCREA 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV----CRSVGLPYAE 181 + E LL +G DL G AV + L + Sbjct: 130 NHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVCEDADALSHEA 189 Query: 182 KMLVLPSFLWK--EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +V L E A+SL+ A ++T F+ L + R+ Sbjct: 190 GAIVEGQSLIDLREGSFRTAESLQQALKITRLFI--RHLLPEGL---KSRQVLE 238 >gi|325134814|gb|EGC57450.1| DNA repair protein RecO [Neisseria meningitidis M13399] gi|325144985|gb|EGC67268.1| DNA repair protein RecO [Neisseria meningitidis M01-240013] gi|325205513|gb|ADZ00966.1| DNA repair protein RecO [Neisseria meningitidis M04-240196] Length = 264 Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 70/234 (29%), Gaps = 16/234 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L V +W Sbjct: 13 FLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASWYGSQELK 72 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 GL + + +P ELYD L + + Sbjct: 73 TLH---RAEWIGGWPQPQGRALFSGLYVNELMLKLTVREDPLPELYDALAEVMEAVCREA 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV----CRSVGLPYAE 181 + E LL +G DL G AV + L + Sbjct: 130 NHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVCEDADALSHEA 189 Query: 182 KMLVLPSFLWK--EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +V L E A+SL+ A ++T F+ L + R+ Sbjct: 190 GAIVEGQSLIDLREGSFRTAESLQQALKITRLFI--RHLLPEGL---KSRQVLE 238 >gi|239979354|ref|ZP_04701878.1| DNA repair protein RecO [Streptomyces albus J1074] gi|291451229|ref|ZP_06590619.1| DNA repair protein RecO [Streptomyces albus J1074] gi|291354178|gb|EFE81080.1| DNA repair protein RecO [Streptomyces albus J1074] Length = 248 Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 81/190 (42%), Gaps = 14/190 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ +TR+YGR R + + + L+ + V V + + Sbjct: 4 FRDDGIVLRTQKLGEADRIITFLTRRYGRVRAVARGVRRTKSKFGARLEPFSHVDVQYFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 R ++ +G + E + ++ + +++ +++ + E + Y + Sbjct: 64 RGSELIGRGLPLCTQTETIAAYGSGIVTDYDRYTAGTAMLETAERFTDHEGQPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L ++ ++ LL+++ G+ L C G+ + S +GG+ Sbjct: 124 LVGGLRTLARGEHAPRLV--LDAFLLRSLAVNGYAPSLGDCARCGMPGPNRFFSVAAGGS 181 Query: 171 VCRSVGLPYA 180 VC +P + Sbjct: 182 VCGECRVPGS 191 >gi|262281673|ref|ZP_06059442.1| DNA repair protein recO [Streptococcus sp. 2_1_36FAA] gi|262262127|gb|EEY80824.1| DNA repair protein recO [Streptococcus sp. 2_1_36FAA] Length = 259 Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 77/205 (37%), Gaps = 3/205 (1%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M A++L R++ E + ++++ T Q G+ + FV++ + ++ P++Q L + + Sbjct: 1 MQSITSKALVLYNRNFREDDKLVKIFTEQAGKRMFFVKHATNSKLSPVIQPLTLANLLMK 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 ++ ++ + Y +P+ +P L+ L L Sbjct: 61 VNDDGLSYIQDYQDVQPFTRINSDLFIMAYATYVAALADASIPDSQPDAALFAFLTKTLE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + E+ +L G L+ +CV T S K G +C Sbjct: 121 LMEEGLDHEILTNIFEVQILSRFGVSLNFHECVFCHRTGLPFDFSFKFSGVLCPDHYRED 180 Query: 180 AEKMLVLP--SFLWKEEQTIDADSL 202 + + P FL + Q ++ +L Sbjct: 181 DRRCHLHPNIPFLLDQFQAVEYSTL 205 >gi|294626961|ref|ZP_06705552.1| DNA repair protein RecO [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598821|gb|EFF42967.1| DNA repair protein RecO [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 240 Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 59/167 (35%), Gaps = 7/167 (4%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM---QPILQAGNLVRV 56 M + + +L VR++ E ++++EV+T Q+GR R Q R + LQ L++ Sbjct: 1 MLIEHERGFVLHVRAWRETSLLVEVLTEQHGRVGLLARGVQGPRKQALRAALQPLQLIQF 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R + A L+ L G L R P +P ELY Sbjct: 61 SAVQRGELAQLRQAEALD---TAPRLAGDTMLAGFYISELLLRLAPRNDPVPELYACYAQ 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV 163 + + + E +LK +GF DL Sbjct: 118 VRSHLASDLPLAWGLRRFERDVLKGLGFAFDLQHDSDGQPIDPAARY 164 >gi|312959175|ref|ZP_07773694.1| DNA repair protein [Pseudomonas fluorescens WH6] gi|311286945|gb|EFQ65507.1| DNA repair protein [Pseudomonas fluorescens WH6] Length = 228 Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 77/228 (33%), Gaps = 12/228 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R+Y E + +++ +T GR +R+ + + + + + V +R + Sbjct: 9 PAYVLHSRAYRETSALVDFLTP-QGRLRAVLRSARG-KAGTLARPFVALDVEFRGKGELK 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + L+ GL L R LP +P ++D L Sbjct: 67 N---VGRLESVGTSAWLNGDALFSGLYLNELLIRLLPAEDPHPAVFDHYAATLLALAEGR 123 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + + E LL ++G+G +L + + + R L + Sbjct: 124 PLEPLLRAFEWRLLDDLGYGFELANDLHGEPIAADGMYRLQVDAGLERVHLLQ--PGLFQ 181 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHL-LRENF 232 L E A SA + L + AL ++ L RE F Sbjct: 182 GTELLAMSEADWSAPGALSAAKR----LMRQALAVHLGGRPLVSRELF 225 >gi|229588603|ref|YP_002870722.1| DNA repair protein RecO [Pseudomonas fluorescens SBW25] gi|229360469|emb|CAY47326.1| DNA repair protein [Pseudomonas fluorescens SBW25] Length = 229 Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 77/227 (33%), Gaps = 12/227 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A +L R+Y E + +++ +T GR +R+ + + + + + V +R + Sbjct: 11 AYVLHSRAYRETSALVDFLTP-QGRLRAVLRSARG-KAGTLARPFVALDVEFRGKGELKN 68 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 + + L+ GL L R LP +P ++D L Sbjct: 69 ---VGRLESVGTSAWLNGEALFSGLYLNELLIRLLPAEDPHPAVFDHYAATLIALAEGRP 125 Query: 127 IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVL 186 + + E LL ++G+G +L + + + R L + Sbjct: 126 LEPLLRAFEWRLLDDLGYGFELNNDLHGDPIAADGMYRLQVDAGLERVYLLQ--PGLFQG 183 Query: 187 PSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHL-LRENF 232 L E A SA + L + AL ++ L RE F Sbjct: 184 TELLAMSEADWTAPGALSAAKR----LMRQALAVHLGGRPLVSRELF 226 >gi|157150562|ref|YP_001449353.1| DNA repair protein RecO [Streptococcus gordonii str. Challis substr. CH1] gi|189039774|sp|A8AU93|RECO_STRGC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|157075356|gb|ABV10039.1| DNA repair protein RecO [Streptococcus gordonii str. Challis substr. CH1] Length = 260 Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 77/205 (37%), Gaps = 3/205 (1%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M A++L R++ E + ++++ T Q G+ + FV++ + ++ P++Q L + + Sbjct: 2 MQSITSKALVLYNRNFREDDKLVKIFTEQAGKRMFFVKHATNSKLSPVIQPLTLANLLMK 61 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 ++ ++ + Y +P+ +P L+ L L Sbjct: 62 VNDDGLSYIQDYQDVQPFTRINSDLFIMAYATYVAALADASIPDSQPDAALFAFLTKTLE 121 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + E+ +L G L+ +CV T S K G +C Sbjct: 122 LMEEGLDHEILTNIFEVQILSRFGVSLNFHECVFCHRTGLPFDFSFKFSGVLCPDHYRED 181 Query: 180 AEKMLVLP--SFLWKEEQTIDADSL 202 + + P FL + Q ++ +L Sbjct: 182 DRRCHLHPNIPFLLDQFQAVEYSTL 206 >gi|78485081|ref|YP_391006.1| DNA repair protein RecO [Thiomicrospira crunogena XCL-2] gi|78363367|gb|ABB41332.1| DNA replication and repair protein RecO [Thiomicrospira crunogena XCL-2] Length = 246 Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 73/245 (29%), Gaps = 20/245 (8%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR-----MQPILQAGNLVRVN 57 + A +L R Y E ++++ T ++G+ ++ +S Q LQ + ++ Sbjct: 5 IEQQAFVLHRRPYRETSLLVTFFTPEFGKQNAVIKGVRSSSKTAQAKQAWLQPFQGLNIS 64 Query: 58 WRSRLAQNLGEFRFEVLESHCAKL-LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 WR + ++ LE + + L + GL L+R L L+ Sbjct: 65 WRDKANRSSDLVSLRQLEPNHVRFPLGGEGSICGLYLNELLYRLLYPSLEVSGLFGEYQQ 124 Query: 117 FLNCH---KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 L + + Q E LL +G+ Q + Sbjct: 125 ALYDLALAEDRYQQAWVLRQFEFALLSELGYAFQTEVDYYQQPIQADKKYLFHLELGLFP 184 Query: 174 SVGLPYA-----EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL 228 + ++ L ++ L +L +Y L + + Sbjct: 185 EPFSQISLDQNQGIVISGQCLLLFAQKAYCESCLTEWKRLF-----RYVLTPYLGQKPIQ 239 Query: 229 -RENF 232 R F Sbjct: 240 TRSLF 244 >gi|121996842|ref|YP_001001629.1| DNA repair protein RecO [Halorhodospira halophila SL1] gi|171769496|sp|A1WT15|RECO_HALHL RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|121588247|gb|ABM60827.1| DNA replication and repair protein RecO [Halorhodospira halophila SL1] Length = 234 Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 57/173 (32%), Gaps = 4/173 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R++ E + ++E+ +++YGR + L+ ++V+WR R Sbjct: 8 PAWVLHRRAFRESSTLVELFSQEYGRIGAVANGVRRRGWSGQLEPFIPLQVSWRGRGDLK 67 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + L G L +P ++ + ++C Sbjct: 68 TLTTVDQAGRGYA---LRGGALACGFYMAEVLLALTRREDPHPRTWERYAVAVDCLA-TD 123 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + EL LL+ G+GL+L + V R+ Sbjct: 124 DAEPALRRFELALLEESGYGLELEQDVHGEPVVAQARYRYSPERGADRAGTGE 176 >gi|294629249|ref|ZP_06707809.1| DNA repair protein RecO [Streptomyces sp. e14] gi|292832582|gb|EFF90931.1| DNA repair protein RecO [Streptomyces sp. e14] Length = 248 Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 76/190 (40%), Gaps = 14/190 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD ++L + GE + I+ ++TR +GR R + + + L+ + V V + + Sbjct: 4 FRDDGVVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 R ++ +G + E + + +++ +++ + E + Y + Sbjct: 64 RGSELIGRGLPLCTQSETIAPYGGGIVTDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + ++ LL+++ G+ C G+ + S SGG+ Sbjct: 124 LVGALRTLARGEHAPHLV--LDAFLLRSLAVNGYAPSFGDCARCGMPGPNRFFSVASGGS 181 Query: 171 VCRSVGLPYA 180 VC P + Sbjct: 182 VCVDCRAPGS 191 >gi|257893052|ref|ZP_05672705.1| recombination protein O [Enterococcus faecium 1,231,408] gi|260559559|ref|ZP_05831739.1| recombination protein O [Enterococcus faecium C68] gi|293559429|ref|ZP_06675968.1| DNA repair protein RecO [Enterococcus faecium E1162] gi|314939539|ref|ZP_07846767.1| DNA repair protein RecO [Enterococcus faecium TX0133a04] gi|314942706|ref|ZP_07849532.1| DNA repair protein RecO [Enterococcus faecium TX0133C] gi|314948956|ref|ZP_07852322.1| DNA repair protein RecO [Enterococcus faecium TX0082] gi|314953303|ref|ZP_07856231.1| DNA repair protein RecO [Enterococcus faecium TX0133A] gi|314993383|ref|ZP_07858748.1| DNA repair protein RecO [Enterococcus faecium TX0133B] gi|314995733|ref|ZP_07860822.1| DNA repair protein RecO [Enterococcus faecium TX0133a01] gi|257829431|gb|EEV56038.1| recombination protein O [Enterococcus faecium 1,231,408] gi|260074227|gb|EEW62549.1| recombination protein O [Enterococcus faecium C68] gi|291606643|gb|EFF36038.1| DNA repair protein RecO [Enterococcus faecium E1162] gi|313590005|gb|EFR68850.1| DNA repair protein RecO [Enterococcus faecium TX0133a01] gi|313592048|gb|EFR70893.1| DNA repair protein RecO [Enterococcus faecium TX0133B] gi|313594646|gb|EFR73491.1| DNA repair protein RecO [Enterococcus faecium TX0133A] gi|313598571|gb|EFR77416.1| DNA repair protein RecO [Enterococcus faecium TX0133C] gi|313641175|gb|EFS05755.1| DNA repair protein RecO [Enterococcus faecium TX0133a04] gi|313644615|gb|EFS09195.1| DNA repair protein RecO [Enterococcus faecium TX0082] Length = 270 Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 62/186 (33%), Gaps = 2/186 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +IL R+Y EK+ ++++ T G+ + +++ + P L R Sbjct: 6 ESKGLILSSRNYKEKDKLVKIFTESSGKMMFYIKGIHRQNQPLAPALLPFTEAVYIGNFR 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + + L YG + + + + + L+ L Sbjct: 66 SEGLSFLSSVKDVHAFRNIQEDIFLSGYGTYLLNLVDAAIEDHQYDPHLFQFTQQALQRM 125 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I E+ +L+ G T CVV G T+ S KSGG +C Sbjct: 126 DQGDDAEIITNIFEVQILQRFGIAPIWTHCVVCGETKGKFDYSSKSGGVICEKHWPMDEH 185 Query: 182 KMLVLP 187 + P Sbjct: 186 RYHADP 191 >gi|256961297|ref|ZP_05565468.1| recombination protein O [Enterococcus faecalis Merz96] gi|293383581|ref|ZP_06629491.1| DNA repair protein RecO [Enterococcus faecalis R712] gi|293387306|ref|ZP_06631862.1| DNA repair protein RecO [Enterococcus faecalis S613] gi|312906131|ref|ZP_07765143.1| DNA repair protein RecO [Enterococcus faecalis DAPTO 512] gi|312909477|ref|ZP_07768332.1| DNA repair protein RecO [Enterococcus faecalis DAPTO 516] gi|256951793|gb|EEU68425.1| recombination protein O [Enterococcus faecalis Merz96] gi|291079093|gb|EFE16457.1| DNA repair protein RecO [Enterococcus faecalis R712] gi|291083204|gb|EFE20167.1| DNA repair protein RecO [Enterococcus faecalis S613] gi|310627777|gb|EFQ11060.1| DNA repair protein RecO [Enterococcus faecalis DAPTO 512] gi|311290150|gb|EFQ68706.1| DNA repair protein RecO [Enterococcus faecalis DAPTO 516] Length = 264 Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 2/189 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR 61 + IIL + + EK+ ++++ T YG+ + FV+ P + R Sbjct: 5 ETKGIILFTKDFKEKDKLVKIFTESYGKLMFFVKGAHRKNNPLLPAILPFTEAVYIGNFR 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + ++ + YG + + + ++ L+ ++ L+ Sbjct: 65 EEGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAIEDQHYDPNLFQFTHMALSAL 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I E+ LL+ G + CV G TQ S K G +C + Sbjct: 125 NEQKDPEIITNIFEIQLLERFGVRPEWHHCVACGETQGKFDYSSKYSGVLCEKHWYLDEQ 184 Query: 182 KMLVLPSFL 190 + P + Sbjct: 185 RYHADPRAI 193 >gi|315150152|gb|EFT94168.1| DNA repair protein RecO [Enterococcus faecalis TX0012] Length = 264 Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 2/189 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSR 61 + IIL + + EK+ ++++ T YG+ + FV+ P + R Sbjct: 5 ETKGIILFTKDFKEKDKLVKIFTESYGKLMFFVKGAHRKNNPLMPAILPFTEAVYIGNFR 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + ++ + YG + + + ++ L+ ++ L+ Sbjct: 65 EEGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAIEDQHYDPNLFQFTHMALSAL 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I E+ LL+ G + CV G TQ S K G +C + Sbjct: 125 NEQKDPEIITNIFEIQLLERFGVRPEWHHCVACGETQGKFDYSSKYSGVLCEKHWHLDEQ 184 Query: 182 KMLVLPSFL 190 + P + Sbjct: 185 RYHADPRAI 193 >gi|315032902|gb|EFT44834.1| DNA repair protein RecO [Enterococcus faecalis TX0017] Length = 264 Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 62/189 (32%), Gaps = 2/189 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR 61 + IIL + + EK+ ++++ T YG+ + FV+ P + R Sbjct: 5 ETKGIILFTKDFKEKDKLVKIFTESYGKLMFFVKGAHRKNNPLLPAILPFTEAVYIGNFR 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + ++ + YG + + + ++ L+ ++ L+ Sbjct: 65 EEGLSFLNSSKGVQPFRNIQQDIFINAYGTYILNLVDAAIEDQHYDPNLFQFTHMALSAL 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I E LL+ G + CV G TQ S K G +C + Sbjct: 125 NEQKDPEIITNIFESQLLERFGVRPEWHHCVACGETQGKFDYSSKYSGVLCEKHWHLDEQ 184 Query: 182 KMLVLPSFL 190 + P + Sbjct: 185 RYHADPRAI 193 >gi|294791413|ref|ZP_06756570.1| DNA repair protein RecO [Scardovia inopinata F0304] gi|294457884|gb|EFG26238.1| DNA repair protein RecO [Scardovia inopinata F0304] Length = 244 Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 67/210 (31%), Gaps = 8/210 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D ++L GE + I+ ++T +G+ + + + L+ + Sbjct: 4 YRDQGVVLRTIKLGEADRIITILTAHHGKIRAVAHGVRRAKSRFGSRLEPFMWDDLLIAQ 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDMLNIFL 118 + V+ + + ++ + IV + + + + Sbjct: 64 GRHDLDTISQAVVISPYASLIVGTYEAYLSASVIVETVDKMITDLRQTGISQRQQYTLVI 123 Query: 119 NCHKIPSVIGKIFVQIELML----LKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + IE L G+ L CVV G + + S ++GGA+C + Sbjct: 124 GALAALAEGKHSPQMIENSYVLRALSLAGWTPRLDSCVVCGRRDQVEYFSTEAGGAMCLT 183 Query: 175 VGLPYAEKMLVLPSFLWKEEQTIDADSLKS 204 LP + K D +SL Sbjct: 184 HRLPRSHKASGQTFSQLGLLLAGDWESLDQ 213 >gi|310643036|ref|YP_003947794.1| DNA repair protein reco [Paenibacillus polymyxa SC2] gi|309247986|gb|ADO57553.1| DNA repair protein RecO [Paenibacillus polymyxa SC2] Length = 246 Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 59/186 (31%), Gaps = 4/186 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLA 63 + I++ YGE N I+ + T G+ VR + + + + Q + R Sbjct: 2 EGIVIRSMDYGEGNKIITLCTESGGKVGVLVRGAKKSKSRHAALTQPFTYGEFVFF-RNT 60 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 E+++SH + Y + L R L + E + L L + Sbjct: 61 GLGTLNAGEIIQSHHTLREDITKAAYASYACELLDRVLQDEETGAFWFKQLKACLEALES 120 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVCRSVGLPYAEK 182 + E +L+ G+ L C+ +G D G V + Sbjct: 121 GKDPLIVMSIYEFKILQAAGYAPQLDACISSGQQCADEDMFISPRLGGVLCRGYKHFDPA 180 Query: 183 MLVLPS 188 L + Sbjct: 181 ALSVAP 186 >gi|257082013|ref|ZP_05576374.1| recombination protein O [Enterococcus faecalis E1Sol] gi|257084564|ref|ZP_05578925.1| recombination protein O [Enterococcus faecalis Fly1] gi|257087440|ref|ZP_05581801.1| recombination protein O [Enterococcus faecalis D6] gi|256990043|gb|EEU77345.1| recombination protein O [Enterococcus faecalis E1Sol] gi|256992594|gb|EEU79896.1| recombination protein O [Enterococcus faecalis Fly1] gi|256995470|gb|EEU82772.1| recombination protein O [Enterococcus faecalis D6] gi|315025404|gb|EFT37336.1| DNA repair protein RecO [Enterococcus faecalis TX2137] gi|315161674|gb|EFU05691.1| DNA repair protein RecO [Enterococcus faecalis TX0645] gi|315173672|gb|EFU17689.1| DNA repair protein RecO [Enterococcus faecalis TX1346] Length = 264 Score = 91.8 bits (226), Expect = 8e-17, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 2/189 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR 61 + IIL + + EK+ ++++ T YG+ + FV+ P + R Sbjct: 5 ETKGIILFTKDFKEKDKLVKIFTESYGKLMFFVKGAHRKNNPLLPAILPFTEAVYIGNFR 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + ++ + YG + + + ++ L+ ++ L+ Sbjct: 65 EEGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAIEDQHYDPNLFQFTHMALSAL 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I E+ LL+ G + CV G TQ S K G +C + Sbjct: 125 NEQKDPEIITNIFEIQLLERFGVRPEWHHCVACGETQGKFDYSSKYSGVLCEKHWHLDEQ 184 Query: 182 KMLVLPSFL 190 + P + Sbjct: 185 RYHADPRAI 193 >gi|189499187|ref|YP_001958657.1| DNA repair protein RecO [Chlorobium phaeobacteroides BS1] gi|238692226|sp|B3EKJ8|RECO_CHLPB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|189494628|gb|ACE03176.1| DNA repair protein RecO [Chlorobium phaeobacteroides BS1] Length = 261 Score = 91.8 bits (226), Expect = 8e-17, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 86/259 (33%), Gaps = 22/259 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M + A++L + E++ I + TR +GR ++ G++ + + + G+L+ V Sbjct: 1 MLTKTRAVVLKEVKFREQSKICSLYTRDFGRISVILKGGRNLKSRLSGLFCTGSLLEVVL 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQ-SIVPLFRFLPEREPCLELYDMLNIF 117 +R ++L + S + I L E + L++ L Sbjct: 61 YNRSNRDLQLVSEARIIRSPMTAEPSMERFSAIYRLIEILKISTGNEEKNIRLFNALERT 120 Query: 118 LNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCV----------VTGVTQDLLWVSPK 166 L P V L L+ GF + +CV G DL Sbjct: 121 LEKLCAPCRNADAAVAWFMLKLISESGFEPSIEQCVTTGKSILPMLQEGSADDLCLTYDP 180 Query: 167 SGGAVCRSVG--LPYAEKMLVLPSFLWKEEQTIDADSL------KSAFQLTDYFLNKYAL 218 G ++ P +++ V L + +D S+ +L L Y Sbjct: 181 GGVSLPVPAAQKGPPGQRLPVQVYLLMRTLNRLDIRSIDEIDIPADNSRLLCDILQNYCS 240 Query: 219 QHNIIHCHLLRENFLGKLL 237 HN + + ++L Sbjct: 241 LHNNYNPSSKNRRIISRIL 259 >gi|307287712|ref|ZP_07567755.1| DNA repair protein RecO [Enterococcus faecalis TX0109] gi|306501450|gb|EFM70753.1| DNA repair protein RecO [Enterococcus faecalis TX0109] gi|315164811|gb|EFU08828.1| DNA repair protein RecO [Enterococcus faecalis TX1302] Length = 262 Score = 91.8 bits (226), Expect = 8e-17, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 2/189 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSR 61 + IIL + + EK+ ++++ T YG+ + FV+ P + R Sbjct: 5 ETKGIILFTKDFKEKDKLVKIFTESYGKLMFFVKGAHRKNNPLMPAILPFTEAVYIGNFR 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + ++ + YG + + + ++ L+ ++ L+ Sbjct: 65 EEGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAIEDQHYDPNLFQFTHMALSAL 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I E+ LL+ G + CV G TQ S K G +C + Sbjct: 125 NEQKDPEIITNIFEIQLLERFGVRPEWHHCVACGETQGKFDYSSKYSGVLCEKHWHLDEQ 184 Query: 182 KMLVLPSFL 190 + P + Sbjct: 185 RYHADPRAI 193 >gi|145296238|ref|YP_001139059.1| DNA repair protein RecO [Corynebacterium glutamicum R] gi|140846158|dbj|BAF55157.1| hypothetical protein [Corynebacterium glutamicum R] Length = 242 Score = 91.4 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 64/182 (35%), Gaps = 3/182 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D A+++ +GE + I+ ++TR +G G + + + + LQ + V Sbjct: 6 FRDRALVVKTHDFGEADRIIVLLTRDHGIVRGVAKGVRRSKSRFGSRLQLFVELDVQLYP 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + + + + ++ +I+ + L E L++ L Sbjct: 66 GRKLST-ISGADTVGYYASGIIEDFTRYSCASAILEIATHLAGLENDPHLFEETTRALKN 124 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + L + + G+ L C G P GGAVC P + Sbjct: 125 IQDSPEPILNLDEFMLRAMNHAGWAPSLFDCAACGRPGPHNAFHPGIGGAVCLYCRPPGS 184 Query: 181 EK 182 + Sbjct: 185 AE 186 >gi|21230732|ref|NP_636649.1| DNA repair protein RecO [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769272|ref|YP_244034.1| DNA repair protein RecO [Xanthomonas campestris pv. campestris str. 8004] gi|188992423|ref|YP_001904433.1| DNA repair protein RecO [Xanthomonas campestris pv. campestris str. B100] gi|42559486|sp|Q8PB50|RECO_XANCP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|81304769|sp|Q4USF9|RECO_XANC8 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|229485575|sp|B0RX25|RECO_XANCB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|21112326|gb|AAM40573.1| DNA repair protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574604|gb|AAY50014.1| DNA repair protein [Xanthomonas campestris pv. campestris str. 8004] gi|167734183|emb|CAP52391.1| Putative DNA repair protein [Xanthomonas campestris pv. campestris] Length = 241 Score = 91.4 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 55/167 (32%), Gaps = 7/167 (4%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM---QPILQAGNLVRV 56 M + + +L R++ E ++++EV+T Q+GR R R + LQ L++ Sbjct: 1 MLIEHERGFVLHARAWRETSLLVEVLTEQHGRVGLLARGVHGPRKQALRAALQPLQLIQF 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R + A L L G L R P P EL+D Sbjct: 61 TAVQRGELAQLRQAEAID---TAPRLLGEAMLAGFYISELLLRLAPRHAPVPELFDCYAQ 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV 163 + + Q E +L +GFG DL Sbjct: 118 ARAHLASGAALAWGLRQFERDVLDGLGFGFDLQHDSDGQPIDPAARY 164 >gi|256617034|ref|ZP_05473880.1| recombination protein O [Enterococcus faecalis ATCC 4200] gi|256853770|ref|ZP_05559135.1| DNA repair protein recO [Enterococcus faecalis T8] gi|307277157|ref|ZP_07558261.1| DNA repair protein RecO [Enterococcus faecalis TX2134] gi|307290539|ref|ZP_07570451.1| DNA repair protein RecO [Enterococcus faecalis TX0411] gi|256596561|gb|EEU15737.1| recombination protein O [Enterococcus faecalis ATCC 4200] gi|256710713|gb|EEU25756.1| DNA repair protein recO [Enterococcus faecalis T8] gi|295113463|emb|CBL32100.1| DNA repair protein RecO [Enterococcus sp. 7L76] gi|306498394|gb|EFM67899.1| DNA repair protein RecO [Enterococcus faecalis TX0411] gi|306506087|gb|EFM75253.1| DNA repair protein RecO [Enterococcus faecalis TX2134] gi|315030212|gb|EFT42144.1| DNA repair protein RecO [Enterococcus faecalis TX4000] Length = 261 Score = 91.4 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 2/189 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR 61 + IIL + + EK+ ++++ T YG+ + FV+ P + R Sbjct: 5 ETKGIILFTKDFKEKDKLVKIFTESYGKLMFFVKGAHRKNNPLLPAILPFTEAVYIGNFR 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + ++ + YG + + + ++ L+ ++ L+ Sbjct: 65 EEGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAIEDQHYDPNLFQFTHMALSAL 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I E+ LL+ G + CV G TQ S K G +C + Sbjct: 125 NEQKDPEIITNIFEIQLLERFGVRPEWHHCVACGETQGKFDYSSKYSGVLCEKHWHLDEQ 184 Query: 182 KMLVLPSFL 190 + P + Sbjct: 185 RYHADPRAI 193 >gi|229545170|ref|ZP_04433895.1| recombination protein O [Enterococcus faecalis TX1322] gi|229549419|ref|ZP_04438144.1| recombination protein O [Enterococcus faecalis ATCC 29200] gi|255972123|ref|ZP_05422709.1| recombination protein O [Enterococcus faecalis T1] gi|256963576|ref|ZP_05567747.1| recombination protein O [Enterococcus faecalis HIP11704] gi|257079641|ref|ZP_05574002.1| recombination protein O [Enterococcus faecalis JH1] gi|257090599|ref|ZP_05584960.1| recombination protein recO [Enterococcus faecalis CH188] gi|257416647|ref|ZP_05593641.1| recombination protein O [Enterococcus faecalis AR01/DG] gi|257421949|ref|ZP_05598939.1| DNA repair protein recO [Enterococcus faecalis X98] gi|294780921|ref|ZP_06746275.1| DNA repair protein RecO [Enterococcus faecalis PC1.1] gi|307270834|ref|ZP_07552122.1| DNA repair protein RecO [Enterococcus faecalis TX4248] gi|307271515|ref|ZP_07552787.1| DNA repair protein RecO [Enterococcus faecalis TX0855] gi|312899838|ref|ZP_07759157.1| DNA repair protein RecO [Enterococcus faecalis TX0470] gi|312905131|ref|ZP_07764252.1| DNA repair protein RecO [Enterococcus faecalis TX0635] gi|312953488|ref|ZP_07772328.1| DNA repair protein RecO [Enterococcus faecalis TX0102] gi|229305656|gb|EEN71652.1| recombination protein O [Enterococcus faecalis ATCC 29200] gi|229309715|gb|EEN75702.1| recombination protein O [Enterococcus faecalis TX1322] gi|255963141|gb|EET95617.1| recombination protein O [Enterococcus faecalis T1] gi|256954072|gb|EEU70704.1| recombination protein O [Enterococcus faecalis HIP11704] gi|256987671|gb|EEU74973.1| recombination protein O [Enterococcus faecalis JH1] gi|256999411|gb|EEU85931.1| recombination protein recO [Enterococcus faecalis CH188] gi|257158475|gb|EEU88435.1| recombination protein O [Enterococcus faecalis ARO1/DG] gi|257163773|gb|EEU93733.1| DNA repair protein recO [Enterococcus faecalis X98] gi|294452047|gb|EFG20495.1| DNA repair protein RecO [Enterococcus faecalis PC1.1] gi|306511787|gb|EFM80785.1| DNA repair protein RecO [Enterococcus faecalis TX0855] gi|306512835|gb|EFM81479.1| DNA repair protein RecO [Enterococcus faecalis TX4248] gi|310628697|gb|EFQ11980.1| DNA repair protein RecO [Enterococcus faecalis TX0102] gi|310631521|gb|EFQ14804.1| DNA repair protein RecO [Enterococcus faecalis TX0635] gi|311293088|gb|EFQ71644.1| DNA repair protein RecO [Enterococcus faecalis TX0470] gi|315152155|gb|EFT96171.1| DNA repair protein RecO [Enterococcus faecalis TX0031] gi|315155342|gb|EFT99358.1| DNA repair protein RecO [Enterococcus faecalis TX0043] gi|315159082|gb|EFU03099.1| DNA repair protein RecO [Enterococcus faecalis TX0312] gi|315579041|gb|EFU91232.1| DNA repair protein RecO [Enterococcus faecalis TX0630] gi|323481398|gb|ADX80837.1| DNA repair protein RecO [Enterococcus faecalis 62] gi|329572236|gb|EGG53896.1| DNA repair protein RecO [Enterococcus faecalis TX1467] Length = 262 Score = 91.4 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 2/189 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR 61 + IIL + + EK+ ++++ T YG+ + FV+ P + R Sbjct: 5 ETKGIILFTKDFKEKDKLVKIFTESYGKLMFFVKGAHRKNNPLLPAILPFTEAVYIGNFR 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + ++ + YG + + + ++ L+ ++ L+ Sbjct: 65 EEGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAIEDQHYDPNLFQFTHMALSAL 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I E+ LL+ G + CV G TQ S K G +C + Sbjct: 125 NEQKDPEIITNIFEIQLLERFGVRPEWHHCVACGETQGKFDYSSKYSGVLCEKHWHLDEQ 184 Query: 182 KMLVLPSFL 190 + P + Sbjct: 185 RYHADPRAI 193 >gi|29376904|ref|NP_816058.1| DNA repair protein RecO, putative [Enterococcus faecalis V583] gi|227553940|ref|ZP_03983987.1| recombination protein O [Enterococcus faecalis HH22] gi|255975190|ref|ZP_05425776.1| recombination protein O [Enterococcus faecalis T2] gi|256763102|ref|ZP_05503682.1| recombination protein O [Enterococcus faecalis T3] gi|256956686|ref|ZP_05560857.1| recombination protein O [Enterococcus faecalis DS5] gi|300861009|ref|ZP_07107096.1| DNA repair protein RecO [Enterococcus faecalis TUSoD Ef11] gi|307285809|ref|ZP_07565943.1| DNA repair protein RecO [Enterococcus faecalis TX0860] gi|42559464|sp|Q831U0|RECO_ENTFA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|29344369|gb|AAO82128.1| DNA repair protein RecO, putative [Enterococcus faecalis V583] gi|227176926|gb|EEI57898.1| recombination protein O [Enterococcus faecalis HH22] gi|255968062|gb|EET98684.1| recombination protein O [Enterococcus faecalis T2] gi|256684353|gb|EEU24048.1| recombination protein O [Enterococcus faecalis T3] gi|256947182|gb|EEU63814.1| recombination protein O [Enterococcus faecalis DS5] gi|300850048|gb|EFK77798.1| DNA repair protein RecO [Enterococcus faecalis TUSoD Ef11] gi|306502570|gb|EFM71837.1| DNA repair protein RecO [Enterococcus faecalis TX0860] gi|315035614|gb|EFT47546.1| DNA repair protein RecO [Enterococcus faecalis TX0027] gi|315146684|gb|EFT90700.1| DNA repair protein RecO [Enterococcus faecalis TX4244] gi|315166397|gb|EFU10414.1| DNA repair protein RecO [Enterococcus faecalis TX1341] gi|315170293|gb|EFU14310.1| DNA repair protein RecO [Enterococcus faecalis TX1342] gi|315574359|gb|EFU86550.1| DNA repair protein RecO [Enterococcus faecalis TX0309B] gi|315580166|gb|EFU92357.1| DNA repair protein RecO [Enterococcus faecalis TX0309A] gi|327535694|gb|AEA94528.1| recombination protein O [Enterococcus faecalis OG1RF] Length = 262 Score = 91.4 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 2/189 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR 61 + IIL + + EK+ ++++ T YG+ + FV+ P + R Sbjct: 5 ETKGIILFTKDFKEKDKLVKIFTESYGKLMFFVKGAHRKNNPLLPAILPFTEAVYIGNFR 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + ++ + YG + + + ++ L+ ++ L+ Sbjct: 65 EEGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAIEDQHYDPNLFQFTHMALSAL 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I E+ LL+ G + CV G TQ S K G +C + Sbjct: 125 NEQKDPEIITNIFEIQLLERFGVRPEWHHCVACGETQGKFDYSSKYSGVLCEKHWHLDEQ 184 Query: 182 KMLVLPSFL 190 + P + Sbjct: 185 RYHADPRAI 193 >gi|312863966|ref|ZP_07724203.1| DNA repair protein RecO [Streptococcus vestibularis F0396] gi|311100532|gb|EFQ58738.1| DNA repair protein RecO [Streptococcus vestibularis F0396] Length = 257 Score = 91.4 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 70/203 (34%), Gaps = 2/203 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + ++L R+Y E + ++++ T Q G+ + FVR G S ++ ++Q N+ Sbjct: 5 ESRGLVLFNRNYRENDKLVKIFTEQAGKRMFFVRGGGSGKLSAVIQPLNIAEFMMTVNDE 64 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + ES Y + + +L+ L L + Sbjct: 65 GLSFIEDYSQAESFKEITSDIFKLSYATYLAALTDAAIADGVVDAQLFAFLERTLELMEE 124 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ +CV S K G +C + + Sbjct: 125 GLDYEILTNIFEIQVLDRFGVRLNFHECVFCHRVGLPFDFSYKFSGLLCPNHYEEDERRS 184 Query: 184 LVLP--SFLWKEEQTIDADSLKS 204 + P +L Q + + L+S Sbjct: 185 HLDPNVPYLLDRFQGLSFEELRS 207 >gi|255019673|ref|ZP_05291752.1| DNA repair protein RecO [Acidithiobacillus caldus ATCC 51756] gi|254970896|gb|EET28379.1| DNA repair protein RecO [Acidithiobacillus caldus ATCC 51756] Length = 248 Score = 91.4 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 4/153 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRL 62 +D A +L + + +++LEV+T +GR R + R L+AG + WR R Sbjct: 6 EDHAFVLHRYPFSDSSLVLEVITAGHGRLGLLARGARRPRSALGGLEAGRPFVLRWRGRG 65 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 E A+L L + R +P EL+ L Sbjct: 66 ELPT---LVSADEVAPARLPGPWQGLCLFYVNELVLRLTVRNDPVPELFAAYAEVLEDLW 122 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + E LL+ +G+ DL C V G Sbjct: 123 AGARATWHLRRFEQRLLRALGWAADLPYCTVCG 155 >gi|290960571|ref|YP_003491753.1| recombination protein O [Streptomyces scabiei 87.22] gi|260650097|emb|CBG73213.1| Recombination protein O [Streptomyces scabiei 87.22] Length = 250 Score = 91.4 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 77/190 (40%), Gaps = 14/190 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD ++L + GE + I+ ++TR +GR R + + + L+ + V V + + Sbjct: 5 FRDDGVVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 64 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 R ++ LG + E + + ++S +++ + E + Y + Sbjct: 65 RGSELLGRGLPLCTQSETIAPYGGGIVSDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 124 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + ++ LL+++ G+ C G+ + S +GG+ Sbjct: 125 LVGALRTLARGEHAPHLV--LDAFLLRSLAVNGYAPSFGDCAKCGMPGPNRFFSVAAGGS 182 Query: 171 VCRSVGLPYA 180 VC +P + Sbjct: 183 VCVDCRVPGS 192 >gi|94968222|ref|YP_590270.1| DNA repair protein RecO [Candidatus Koribacter versatilis Ellin345] gi|119361444|sp|Q1ISF4|RECO_ACIBL RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|94550272|gb|ABF40196.1| DNA replication and repair protein RecO [Candidatus Koribacter versatilis Ellin345] Length = 244 Score = 91.4 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 59/167 (35%), Gaps = 2/167 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M Q +AI+L E ++++ + TR G+ G + + R + L+ VRV + Sbjct: 1 MLKQSEAIVLRTYPMREADLLVTLFTRAEGKIKGVAKAAKKSRRRFGGALEPLTHVRVYY 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R Q L + + L + + L + L++ + Sbjct: 61 EDRERQELTRLDSCDVLASPMSAEVDYPRALALGHVAEVIDDLLPDREPNDAVFRLSLAV 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP 165 +P + +L +++ GF DL CVV G D Sbjct: 121 LGQLVPGAVWMPLTYFDLWMVRLAGFLPDLMHCVVCGEELDDRAFFH 167 >gi|217970711|ref|YP_002355945.1| DNA repair protein RecO [Thauera sp. MZ1T] gi|217508038|gb|ACK55049.1| DNA repair protein RecO [Thauera sp. MZ1T] Length = 252 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 52/149 (34%), Gaps = 5/149 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSR 61 Q A +L + E ++I+E+ R++GR + + +++ +L A + ++W Sbjct: 10 QQPAWVLHTYPWRETSLIVEIFAREHGRVALVAKGARRPHSQLRGVLLAFQPLWMDWSGG 69 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 LL + G L R +P L+D + Sbjct: 70 GEVKT---LVRAEWQGGQPLLIGRALICGYYLNELLVRLTAREDPHPRLFDAYAEAVRAL 126 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTK 150 I + EL LL+ +G+ L Sbjct: 127 GRGEAESPILRRFELALLQELGYEAGLAN 155 >gi|257419863|ref|ZP_05596857.1| recombination protein recO [Enterococcus faecalis T11] gi|257161691|gb|EEU91651.1| recombination protein recO [Enterococcus faecalis T11] Length = 262 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 2/189 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR 61 + IIL + + EK+ ++++ T YG+ + FV+ P + R Sbjct: 5 ETKGIILFTKDFKEKDKLVKIFTEAYGKLMFFVKGAHRKNNPLLPAILPFTEAVYIGNFR 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + ++ + YG + + + ++ L+ ++ L+ Sbjct: 65 EEGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAIEDQHYDPNLFQFTHMALSAL 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I E+ LL+ G + CV G TQ S K G +C + Sbjct: 125 NEQKDPEIITNIFEIQLLERFGVRPEWHHCVACGETQGKFDYSSKYSGVLCEKHWHLDEQ 184 Query: 182 KMLVLPSFL 190 + P + Sbjct: 185 RYHADPRAI 193 >gi|269794674|ref|YP_003314129.1| DNA replication and repair protein RecO [Sanguibacter keddieii DSM 10542] gi|269096859|gb|ACZ21295.1| DNA replication and repair protein RecO [Sanguibacter keddieii DSM 10542] Length = 281 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 57/183 (31%), Gaps = 4/183 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+A++L GE + I+ +TR++G+ + + S R L+ V V Sbjct: 8 YRDEALVLRTHKLGEADRIITFLTREHGKVRAVAKGVRRTSSRFGARLEPFMFVDVQLHV 67 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC--LELYDMLNIFL 118 ++ V A +L+ G + R + + + + Sbjct: 68 GRNLDIVTQAEMVQPYARAIFSDYTLYTAGAVMLETADRLVEAEREPSVQQFWLLAGALR 127 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 G + L L G+ C G S GG VC P Sbjct: 128 ALADHAHAPGLVLDSYLLRALAVAGWAPTFADCARCGEPGPHRAFSVAQGGTVCPRCRPP 187 Query: 179 YAE 181 + Sbjct: 188 GST 190 >gi|320010909|gb|ADW05759.1| DNA repair protein RecO [Streptomyces flavogriseus ATCC 33331] Length = 248 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 81/211 (38%), Gaps = 14/211 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD ++L + GE + I+ ++TR +GR R + + + L+ + V V + + Sbjct: 4 FRDDGVVLRTQKLGEADRIITILTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFA 63 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDM 113 R ++ +G + E + + ++S +++ + E + Y + Sbjct: 64 RGSELIGRGLPLCTQSETIAPYGGGIVSDYARYTAGTAMLETAERFTDHEGEPAVQQYLL 123 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L L + ++ LL+++ G+ C G+ + S +GG Sbjct: 124 LVGGLRTLARAEHAPNL--ILDAFLLRSLAVNGYAPSFVDCAKCGMPGPNRFFSVAAGGV 181 Query: 171 VCRSVGLPYAEKMLVLPSFLWKEEQTIDADS 201 +C +P + L T D ++ Sbjct: 182 ICGDCRVPGSVVPSAEAVELLSALLTGDWET 212 >gi|238020903|ref|ZP_04601329.1| hypothetical protein GCWU000324_00798 [Kingella oralis ATCC 51147] gi|237867883|gb|EEP68889.1| hypothetical protein GCWU000324_00798 [Kingella oralis ATCC 51147] Length = 300 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 48/166 (28%), Gaps = 5/166 (3%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R +GR R+ ++ + +L + +W + Sbjct: 64 FLLTALPWRENSLRVEAFSRDFGRVSLLARSARTRGSELRGVLLPFVPISASWFGKEELK 123 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + L + + + EL+ L+ L Sbjct: 124 TVHRAEWRGGWAQPV---GQRLMSALYVNELVLKLTAREDGQPELFTALHDVLRAICTAP 180 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV 171 E LL +GF D + W + + AV Sbjct: 181 HFASALRCFEWRLLTLLGFAPDWARDADGRRVAAEGWYAVQPETAV 226 >gi|77457223|ref|YP_346728.1| DNA repair protein RecO [Pseudomonas fluorescens Pf0-1] gi|92087032|sp|Q3KHL7|RECO_PSEPF RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|77381226|gb|ABA72739.1| DNA repair protein [Pseudomonas fluorescens Pf0-1] Length = 229 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 54/152 (35%), Gaps = 5/152 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R+Y E + +++ +T GR +R+ + + + + + V +R + Sbjct: 10 PAYVLHSRAYRETSALVDFLTP-QGRLRAVLRSARG-KAGTLARPFVPLEVEFRGKGELK 67 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + A + GL L R LP +P ++D L Sbjct: 68 N---VGRMESVGNATWMVGEALFSGLYLNELLIRLLPAEDPHPAVFDHYAATLLALAEGR 124 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + + E LL ++G+G L + Sbjct: 125 PLEPLLRSFEWRLLDDLGYGFSLNTDINDEPV 156 >gi|312277442|gb|ADQ62099.1| DNA repair protein recO [Streptococcus thermophilus ND03] Length = 257 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 70/203 (34%), Gaps = 2/203 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + IL R+Y E + ++++ T+Q G+ + FVR G S ++ ++Q N+ Sbjct: 5 ESRGFILFNRNYRENDKLVKIFTKQAGKRMFFVRGGGSGKLSAVIQPLNIAEFMMTVNDE 64 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + ES Y + + +L+ L L + Sbjct: 65 GLSFIEDYSQAESFKEITSDIFKLSYATYLAALTDAAIADGVVDAQLFAFLEKTLVLMEE 124 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ +CV S K G +C + + Sbjct: 125 GLDYEILTNIFEIQVLDRFGVRLNFHECVFCHRVGLPFDFSYKFSGLLCPNHYEEDERRS 184 Query: 184 LVLP--SFLWKEEQTIDADSLKS 204 + P +L Q + + L+S Sbjct: 185 HLDPNVPYLLDRFQGLSFEELRS 207 >gi|313500337|gb|ADR61703.1| RecO [Pseudomonas putida BIRD-1] Length = 227 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 74/232 (31%), Gaps = 14/232 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R+Y E + +++ T GR +R + + +++ + V R R Sbjct: 8 PAYVLHSRAYKETSALVDFFTP-QGRMRAVLRRARG-KGGSLVRPFVSLEVELRGRGELK 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + A L GL L R LP P L++ + L Sbjct: 66 N---VSRMDSTGIAAWLHGDALFSGLYLNELLMRLLPAEAPFPALFEHYTLTLQALSAGR 122 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + + E LL +G+ L V + + R + Sbjct: 123 PLEPLLRSFEWRLLDELGYAFSLHHDVNEQPIAADGLYRLRVDAGLERVELAQ--PGLFR 180 Query: 186 LPSFLWKEEQTID-ADSLKSAFQLTDYFLNKYALQHNIIHCHL-LRENFLGK 235 L + D +L +A + L + AL ++ L RE F + Sbjct: 181 GTELLALAQTDWDAPGALLAAKR-----LMRQALAVHLGAKPLVSRELFRKR 227 >gi|257890446|ref|ZP_05670099.1| recombination protein O [Enterococcus faecium 1,231,410] gi|294618703|ref|ZP_06698236.1| DNA repair protein RecO [Enterococcus faecium E1679] gi|257826806|gb|EEV53432.1| recombination protein O [Enterococcus faecium 1,231,410] gi|291595046|gb|EFF26390.1| DNA repair protein RecO [Enterococcus faecium E1679] Length = 270 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 61/186 (32%), Gaps = 2/186 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +IL R+Y EK+ ++++ T G+ + +++ + P L R Sbjct: 6 ESKGLILSSRNYKEKDKLVKIFTESSGKMMFYIKGIHRQNQPLAPALLPFTEAVYIGNFR 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + + L YG + + + + + L+ L Sbjct: 66 SEGLSFLSSVKDVHAFRNIQEDIFLSGYGTYLLNLVDAAIEDHQYDPHLFQFTQQALQRM 125 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I E+ +L+ G T CVV G T+ S K GG +C Sbjct: 126 DQGDDAEIITNIFEVQILQRFGIAPIWTHCVVCGETKGKFDYSSKYGGVICEKHWPMDEH 185 Query: 182 KMLVLP 187 + P Sbjct: 186 RYHADP 191 >gi|227519873|ref|ZP_03949922.1| recombination protein O [Enterococcus faecalis TX0104] gi|227072667|gb|EEI10630.1| recombination protein O [Enterococcus faecalis TX0104] gi|315144806|gb|EFT88822.1| DNA repair protein RecO [Enterococcus faecalis TX2141] Length = 264 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 63/189 (33%), Gaps = 2/189 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR 61 + IIL + + EK+ ++++ T YG+ + FV+ P + R Sbjct: 5 ETKGIILFTKDFKEKDKLVKIFTESYGKLMFFVKGAHRKNNPLLPAILPFTEAVYIGNFR 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + ++ + YG + + + ++ L+ ++ L+ Sbjct: 65 EEGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAIEDQHYDPNLFQFTHMALSAL 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I E+ LL+ G + CV G TQ S + G +C + Sbjct: 125 NEQKDPEIITNIFEIQLLERFGVRPEWHHCVACGETQGKFDYSSRYSGVLCEKHWHLDEQ 184 Query: 182 KMLVLPSFL 190 + P + Sbjct: 185 RYHADPRAI 193 >gi|19553482|ref|NP_601484.1| DNA repair protein RecO [Corynebacterium glutamicum ATCC 13032] gi|62391125|ref|YP_226527.1| DNA repair protein RecO [Corynebacterium glutamicum ATCC 13032] gi|21325055|dbj|BAB99677.1| Recombinational DNA repair protein [Corynebacterium glutamicum ATCC 13032] gi|41326464|emb|CAF20626.1| Recombinational DNA repair protein (RecF pathway) [Corynebacterium glutamicum ATCC 13032] Length = 242 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 64/182 (35%), Gaps = 3/182 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D A+++ +GE + I+ ++TR +G G + + + + LQ + V Sbjct: 6 FRDRALVVKTYDFGEADRIIVLLTRDHGIVRGVAKGVRRSKSRFGSRLQLFVELDVQLYP 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + + + + ++ +I+ + + E L++ L Sbjct: 66 GRKLST-ISGADTVGYYASGIIEDFTRYSCASAILEIATHIAGLENDPHLFEETTRALKN 124 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + L + + G+ L C G P GGAVC P + Sbjct: 125 IQDSPEPILNLDEFMLRAMNHAGWAPSLFDCAACGRPGPHNAFHPGVGGAVCLYCRPPGS 184 Query: 181 EK 182 + Sbjct: 185 AE 186 >gi|322390548|ref|ZP_08064065.1| recombination protein O [Streptococcus parasanguinis ATCC 903] gi|321142744|gb|EFX38205.1| recombination protein O [Streptococcus parasanguinis ATCC 903] Length = 259 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 65/188 (34%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 + I+L R + E + ++++ T + G+ + FV++ R+ P+LQ + + Sbjct: 5 IETRGIVLYNRDFREDDKLVKIFTEKSGKRMFFVKHAGKSRLNPMLQPLVTADMLLKIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 F+ ++ + Y + + + + L+ L L+ + Sbjct: 65 DGLSYIDDFQDVQVYKKINADLFALSYATYVLALADASIQDNQVDPALFAFLEKTLSLME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ LL G L+L +C S + G +C + Sbjct: 125 EGLDYEVLTNIFEIQLLSRFGVVLNLHECCFCHRVGLPFDYSFRYSGVLCPDHYDRDERR 184 Query: 183 MLVLPSFL 190 P+ L Sbjct: 185 AHWHPNVL 192 >gi|322517630|ref|ZP_08070495.1| recombination protein O [Streptococcus vestibularis ATCC 49124] gi|322123707|gb|EFX95292.1| recombination protein O [Streptococcus vestibularis ATCC 49124] Length = 257 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 70/203 (34%), Gaps = 2/203 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + ++L R+Y E + ++++ T Q G+ + FVR G S ++ ++Q N+ Sbjct: 5 ESRGLVLFNRNYRENDKLVKIFTEQAGKRMFFVRGGGSGKLSAVIQPLNIAEFMMTVNDE 64 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + ES Y + + +L+ L L + Sbjct: 65 GLSFIEDYSQAESFKEITSDIFKLSYATYLAALTDAAIADGVVDAQLFAFLKKTLELMEE 124 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ +CV S K G +C + + Sbjct: 125 GLDYEILTNIFEIQVLDRFGVRLNFHECVFCHRVGLPFDFSYKFSGLLCPNHYEEDERRS 184 Query: 184 LVLP--SFLWKEEQTIDADSLKS 204 + P +L Q + + L+S Sbjct: 185 HLDPNVPYLLDRFQGLSFEELRS 207 >gi|330950054|gb|EGH50314.1| DNA repair protein RecO [Pseudomonas syringae Cit 7] Length = 227 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 57/150 (38%), Gaps = 5/150 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R+Y E + +++ +T GR +R+ + + + + + V +R R Sbjct: 8 PAYVLHSRAYRENSALVDFLTP-QGRLRAVLRSAKG-KAGSLARPFVPLEVEFRGRGELK 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + A ++ G+ L R LP +P +++ L + Sbjct: 66 N---VGRMESAGVATWMTGEALFSGMYLNELLIRLLPAEDPHPAVFEHYAATLLALSLGR 122 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + E LL ++G+G + + Sbjct: 123 PLEPLLRSFEWRLLDDLGYGFAMDADINGE 152 >gi|325275442|ref|ZP_08141373.1| DNA repair protein RecO [Pseudomonas sp. TJI-51] gi|324099418|gb|EGB97333.1| DNA repair protein RecO [Pseudomonas sp. TJI-51] Length = 227 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 78/232 (33%), Gaps = 14/232 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R+Y E + +++ T GR +R + + +++ + + R R Sbjct: 8 PAYVLHSRAYKETSALVDFFTP-QGRMRAVLRRARG-KGGSLVRPFVPLELELRGRGELK 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + A L GL L R LP P + L++ + L Sbjct: 66 N---VGRMDSAGIAAWLHGDALFSGLYLNELLMRLLPAEAPFVALFEHYALTLQALAEGR 122 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + + E LL +G+ L++ V + + R + Sbjct: 123 PLEPLLRSFEWRLLDELGYAFSLSQDVNDYPIAADGLYRLRVDAGLERV--ELVQPGLFR 180 Query: 186 LPSFLWKEEQTIDAD-SLKSAFQLTDYFLNKYALQHNIIHCHL-LRENFLGK 235 L + AD +L +A + L + AL ++ L RE F + Sbjct: 181 GTELLALAQADWSADGALLAAKR-----LMRQALAVHLGGKPLVSRELFRKR 227 >gi|289676658|ref|ZP_06497548.1| DNA repair protein RecO [Pseudomonas syringae pv. syringae FF5] gi|302186919|ref|ZP_07263592.1| DNA repair protein RecO [Pseudomonas syringae pv. syringae 642] Length = 227 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 57/150 (38%), Gaps = 5/150 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R+Y E + +++ +T GR +R+ + + + + + V +R R Sbjct: 8 PAYVLHSRAYRENSALVDFLTP-QGRLRAVLRSAKG-KAGSLARPFVPLEVEFRGRGELK 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + A ++ G+ L R LP +P +++ L + Sbjct: 66 N---VGRMESAGVATWMTGEALFSGMYLNELLIRLLPAEDPHPAVFEHYAATLLALSLGR 122 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + E LL ++G+G + + Sbjct: 123 PLEPLLRSFEWRLLDDLGYGFAMDADINGE 152 >gi|322374257|ref|ZP_08048789.1| DNA repair protein RecO [Streptococcus sp. C150] gi|321276861|gb|EFX53934.1| DNA repair protein RecO [Streptococcus sp. C150] Length = 257 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 69/207 (33%), Gaps = 3/207 (1%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M + ++L R+Y E + ++++ T Q G+ + FVR G + ++ ++Q + Sbjct: 1 MQKLESRGLVLFNRNYRENDKLVKIFTEQAGKRMFFVRGGGAGKLSAVIQPLTIAEFMMT 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + ES Y + + +L+ L L Sbjct: 61 VNDEGLSFIEDYSQAESFKEITSDIFKLSYATYLAALTDAAIADGMVDEQLFAFLEKTLE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + E+ +L G L+ +CV S K G +C + Sbjct: 121 LMEEGLDYEILTNIFEVQVLDRFGVKLNFHECVFCHRVGLPFDFSYKYSGLLCPNHYAED 180 Query: 180 AEKMLVLP--SFLWKEEQTIDADSLKS 204 + + P +L Q + L+S Sbjct: 181 ERRSHLDPNVPYLLDRFQGLSFKELRS 207 >gi|319940341|ref|ZP_08014691.1| DNA repair protein recO [Streptococcus anginosus 1_2_62CV] gi|319810397|gb|EFW06739.1| DNA repair protein recO [Streptococcus anginosus 1_2_62CV] Length = 257 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 27/202 (13%), Positives = 68/202 (33%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ ++ P++Q + + Sbjct: 5 ITSKGLVLYNRNFRENDKLVKIFTEQAGKRMFFVKHARNSKLNPVIQPLVVADFLMKIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 ++ + + Y + + + E L+ L L + Sbjct: 65 DGLSYIDDYQEVTTFQHINHDLFAMAYATYVVALADTSIQDNEIDSALFAFLQKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L+ +C S G +C + Sbjct: 125 QGLDYEVLTNIFEIQILSRFGISLNFHECCFCHRIGLPFDFSFTYNGVLCPEHYGKDERR 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q + L Sbjct: 185 SHLDPNIPYLLDQFQAVQYSEL 206 >gi|55820130|ref|YP_138572.1| DNA repair protein RecO [Streptococcus thermophilus LMG 18311] gi|55822019|ref|YP_140460.1| DNA repair protein RecO [Streptococcus thermophilus CNRZ1066] gi|67461284|sp|Q5M209|RECO_STRT1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|67461290|sp|Q5M6K1|RECO_STRT2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|55736115|gb|AAV59757.1| DNA repair protein [Streptococcus thermophilus LMG 18311] gi|55738004|gb|AAV61645.1| DNA repair protein [Streptococcus thermophilus CNRZ1066] Length = 257 Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 70/203 (34%), Gaps = 2/203 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + IL R+Y E + ++++ T+Q G+ + FVR G S ++ ++Q N+ Sbjct: 5 ESRGFILFNRNYRENDKLVKIFTKQAGKRMFFVRGGGSGKLSAVIQPLNIAEFMMTVNDE 64 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + ES Y + + +L+ L L + Sbjct: 65 GLSFIEDYSQAESFKEITSDIFKLSYATYLAALTDAAIADGVVDAQLFAFLEKTLVLMEE 124 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ +CV S K G +C + + Sbjct: 125 GLDYEILTNIFEIQVLDRFGVRLNFHECVFCHRVGLPFDFSYKFSGLLCPNHYEEDERRS 184 Query: 184 LVLP--SFLWKEEQTIDADSLKS 204 + P +L Q + + L+S Sbjct: 185 HLDPNVPYLLDRFQGLSFEELRS 207 >gi|116626995|ref|YP_819614.1| DNA repair protein RecO [Streptococcus thermophilus LMD-9] gi|122268400|sp|Q03N04|RECO_STRTD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|116100272|gb|ABJ65418.1| DNA replication and repair protein RecO [Streptococcus thermophilus LMD-9] Length = 257 Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 71/203 (34%), Gaps = 2/203 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + +IL R+Y E + ++++ T+Q G+ + FVR G S ++ ++Q N+ Sbjct: 5 ESRGVILFNRNYRENDKLVKIFTKQAGKRMFFVRGGGSGKLSAVIQPLNIAEFMMTVNDE 64 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + ES Y + + EL+ L L + Sbjct: 65 GLSFIEDYSQAESFKEITSDIFKLSYATYLAALTDAAIADGVVDAELFAFLEKTLVLMEE 124 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ +CV S K G +C + + Sbjct: 125 GLDYEILTNIFEIQVLDRFGVRLNFHECVFCHRVGLPFDFSYKFSGLLCPNHYEEDERRS 184 Query: 184 LVLP--SFLWKEEQTIDADSLKS 204 + P +L Q + + L+S Sbjct: 185 HLDPNVPYLLDRFQGLSFEELRS 207 >gi|294788250|ref|ZP_06753493.1| DNA repair protein RecO [Simonsiella muelleri ATCC 29453] gi|294483681|gb|EFG31365.1| DNA repair protein RecO [Simonsiella muelleri ATCC 29453] Length = 251 Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 52/168 (30%), Gaps = 5/168 (2%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + + E ++ +E +R YGR R+ ++ + +L + +W + Sbjct: 13 FLLSTKPWRENSLWVEAFSRDYGRVALLARSARTRGSELRGVLIPFVPLSASWYGKEELK 72 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 S + L + +P ++Y L + Sbjct: 73 TLH---RAEWLGGWAQPHSRALFSAMYVNELLMKLTAREDPHDDIYAALYRVMQSICTQE 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 Q E LL +G D + + + + ++ AVC Sbjct: 130 NHVAALRQFEYALLNTLGVAPDFSLDSNNQLIESEKYYWIRAEEAVCH 177 >gi|307329119|ref|ZP_07608286.1| DNA repair protein RecO [Streptomyces violaceusniger Tu 4113] gi|306885314|gb|EFN16333.1| DNA repair protein RecO [Streptomyces violaceusniger Tu 4113] Length = 252 Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 71/191 (37%), Gaps = 15/191 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++DD I+L + GE + I+ ++TR GR R + + + L+ + V V + S Sbjct: 7 FRDDGIVLRTQKLGEADRIISLLTRNNGRVRAVARGVRRTKSKFGARLEPFSHVDVQFFS 66 Query: 61 RLAQN------LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YD 112 R + E + + +++ +++ + E + Y Sbjct: 67 RGGGELIGRGLPLCTQSETIAPYGGSIVTDYARYTAGTAMLETAERFTDHEGEPAVQQYL 126 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGG 169 +L L + ++ LL+++ G+ C G+ + S +GG Sbjct: 127 LLVGALRTLAAGEHQPHLV--LDAFLLRSLAVNGYAPSFNDCAKCGMPGPNRFFSVGAGG 184 Query: 170 AVCRSVGLPYA 180 +C +P + Sbjct: 185 VICGECRVPGS 195 >gi|330898517|gb|EGH29936.1| DNA repair protein RecO [Pseudomonas syringae pv. japonica str. M301072PT] Length = 209 Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 57/150 (38%), Gaps = 5/150 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R+Y E + +++ +T GR +R+ + + + + + V +R R Sbjct: 8 PAYVLHSRAYRENSALVDFLTP-QGRLRAVLRSAKG-KAGSLARPFVPLEVEFRGRGELK 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + A ++ G+ L R LP +P +++ L + Sbjct: 66 N---VGRMESAGVATWMTGEALFSGMYLNELLIRLLPAEDPHPAVFEHYAATLLALSLGG 122 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + E LL ++G+G + + Sbjct: 123 PLEPLLRSFEWRLLDDLGYGFAMDADINGE 152 >gi|120555158|ref|YP_959509.1| DNA repair protein RecO [Marinobacter aquaeolei VT8] gi|171769204|sp|A1U2V3|RECO_MARAV RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|120325007|gb|ABM19322.1| DNA replication and repair protein RecO [Marinobacter aquaeolei VT8] Length = 246 Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 48/152 (31%), Gaps = 8/152 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSR 61 Q+ A ++ R + E +++++ T +GR R S + + LQ + V+W + Sbjct: 7 QEPAYVVHRRPWRETALLVDLFTLNHGRMSVVARGANSTKSPLKAQLQPFQPLLVDWTGK 66 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + G + R LP +P L+ L Sbjct: 67 SELKTLVQLEVR---SAPAVSQPRALYSGFYINELVQRVLPVADPSPALFASYIETLQAL 123 Query: 122 KI---PSVIGKIFVQIELMLLKNIGFGLDLTK 150 + + + E ++G+ + Sbjct: 124 ADLSSQDDVEPLLRRFERAFAASLGYDFAWDE 155 >gi|237798715|ref|ZP_04587176.1| DNA repair protein RecO [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806148|ref|ZP_04592852.1| DNA repair protein RecO [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021568|gb|EGI01625.1| DNA repair protein RecO [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027261|gb|EGI07316.1| DNA repair protein RecO [Pseudomonas syringae pv. oryzae str. 1_6] Length = 227 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 57/150 (38%), Gaps = 5/150 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R+Y E + +++ +T GR +R+ + + + + + V +R R Sbjct: 8 PAYVLHSRAYRENSALVDFLTP-QGRLRAVLRSAKG-KAGSLARPFVPLEVEFRGRGELK 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + A ++ G+ L R LP +P ++D L + Sbjct: 66 N---VGRMESAGVATWMTGEALFSGMYLNELLIRLLPAEDPHPAVFDHYAATLIALALGR 122 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + E LL ++G+G + + Sbjct: 123 PLEPLLRSFEWRLLDDLGYGFAMDADINGD 152 >gi|254284014|ref|ZP_04958982.1| DNA repair protein RecO [gamma proteobacterium NOR51-B] gi|219680217|gb|EED36566.1| DNA repair protein RecO [gamma proteobacterium NOR51-B] Length = 246 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 33/227 (14%), Positives = 67/227 (29%), Gaps = 9/227 (3%) Query: 10 LGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR----MQPILQAGNLVRVNWRSRLAQN 65 L RSYG+ ++LEV T + GR + +LQ + + Sbjct: 2 LHRRSYGDNGLLLEVFTHETGRLSAVAKGVHRRSRGGAKSGLLQPFTPLLITLAGNSDLK 61 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + L + L L R LP+ +P +L+ L K Sbjct: 62 QLRQIES---AGANLRLDREAMISALYVNELLVRLLPKFDPQPQLFADYGSSLQDMK-AG 117 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + + E LL+ +G+ +L+ V+ + + Sbjct: 118 GNEPVLRRFEWRLLEALGYQPNLSCDVLGESLLGHRRYALDPTRGLVGVDDTETDNSGFT 177 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLREN 231 + + + + ++++ AL+ + RE Sbjct: 178 GNTLIRVIDALENHSEFDREALACAKYISRRALKVQLGDKPLRSREL 224 >gi|294664537|ref|ZP_06729882.1| DNA repair protein RecO [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605699|gb|EFF49005.1| DNA repair protein RecO [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 240 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 59/167 (35%), Gaps = 7/167 (4%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM---QPILQAGNLVRV 56 M + + +L VR++ E ++++EV+T Q+GR R Q R + LQ L++ Sbjct: 1 MLIEHERGFVLHVRAWRETSLLVEVLTEQHGRVGLLARGVQGPRKQALRAALQPLQLIQF 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R + A L+ L G L R P +P ELY Sbjct: 61 SAVQRGELAQLRQADALD---TAPRLAGDTMLAGFYISELLLRLAPRNDPVPELYACYAQ 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV 163 + + + E +L+ +GF DL Sbjct: 118 VRSHLASDLPLAWGLRRFERDVLEGLGFAFDLQHDSDGQPIDPAARY 164 >gi|190575412|ref|YP_001973257.1| DNA repair protein RecO [Stenotrophomonas maltophilia K279a] gi|229485574|sp|B2FPX7|RECO_STRMK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|190013334|emb|CAQ46968.1| putative DNA repair protein RecO [Stenotrophomonas maltophilia K279a] Length = 239 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 56/166 (33%), Gaps = 6/166 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRN---GQSHRMQPILQAGNLVRVN 57 M D +L R+Y E ++++EV++ Q+GR R + ++ LQ +R + Sbjct: 2 MIEDDTGFVLHARAYRETSLLVEVLSAQHGRVGLLARGVSTAKGQVLRAALQPLQWIRFS 61 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + R + A L L G R P ++P ELY Sbjct: 62 AQQRGELAQLRGAEALD---AAPRLVGQAMLAGFYLSELTLRLAPRQDPLPELYLAYGEA 118 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV 163 + + + + E LL +G G +L Sbjct: 119 RARLAVGAGLAWTLRRFERELLTALGLGFELDSASDGQPIDPAARY 164 >gi|315127395|ref|YP_004069398.1| DNA repair protein recO (recombination protein O) [Pseudoalteromonas sp. SM9913] gi|315015909|gb|ADT69247.1| DNA repair protein recO (recombination protein O) [Pseudoalteromonas sp. SM9913] Length = 230 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 33/230 (14%), Positives = 72/230 (31%), Gaps = 13/230 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVR--NGQSHRMQPILQAGNLVRVNWRSRLA 63 A +L R Y + ++L+++ G+ R Q+ + + LQ + V++ + Sbjct: 7 KAYLLHRRPYSDSQVMLDMLVEGVGQLRMLARVSGRQATKYKAQLQPFQALLVHYNGKYD 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + L+ G R +P EP +++ + L Sbjct: 67 LK---YINKFELHGNPLFLTGDKLYCGFYLNELTNRIVPINEPIDQVFQLYKTHLENLNS 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + + + E LL+ +G+G+D + D S A + Sbjct: 124 GTDMQAVLRSYEFQLLELLGYGVDFSFDADGEPIDDTQTY---SYFAEVGFAVQHDSRSG 180 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + L++Y L+ + + RE F Sbjct: 181 FTGSQLNAIANHDFSQADVLYMAK----QLSRYLLKPLLGNKPLKSRELF 226 >gi|21242080|ref|NP_641662.1| DNA repair protein RecO [Xanthomonas axonopodis pv. citri str. 306] gi|42559487|sp|Q8PMU8|RECO_XANAC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|21107487|gb|AAM36198.1| DNA repair protein [Xanthomonas axonopodis pv. citri str. 306] Length = 240 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 58/167 (34%), Gaps = 7/167 (4%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM---QPILQAGNLVRV 56 M + + +L VR++ E ++++EV+T Q+GR R Q R + LQ L++ Sbjct: 1 MLIEHERGFVLHVRAWRETSLLVEVLTEQHGRVGLLARGVQGPRKQALRAALQPLQLIQF 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R + A L+ L G L R P +P ELY Sbjct: 61 SAVQRGELAQLRQAEALD---TAPRLAGDTMLAGFYIGELLLRLAPRHDPVPELYACYAQ 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV 163 + + E +L+ +GF DL Sbjct: 118 ARRHLASDLPLAWGLRRFERDVLEGLGFAFDLQHDSEGQPIDPAARY 164 >gi|325920675|ref|ZP_08182585.1| DNA replication and repair protein RecO [Xanthomonas gardneri ATCC 19865] gi|325548865|gb|EGD19809.1| DNA replication and repair protein RecO [Xanthomonas gardneri ATCC 19865] Length = 240 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 55/167 (32%), Gaps = 7/167 (4%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG---QSHRMQPILQAGNLVRV 56 M ++ +L VR + E ++++EV+T Q GR R + ++ LQ L++ Sbjct: 1 MLIDNERGFVLHVRPWRETSLLVEVLTEQQGRVGLLARGVHAPRKQALRAALQPLQLIQF 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R + A L+ L G L R P +P EL+D Sbjct: 61 TAMQRGELAQLRQAEALD---TAPRLAGETMLAGFYISELLLRLAPRNDPVPELFDCYAR 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV 163 + Q E +L +GF DL Sbjct: 118 ARAHLASNLPLAWGLRQFERDVLDGLGFAFDLQHDNDGQPIDPAARY 164 >gi|332289406|ref|YP_004420258.1| DNA repair protein RecO [Gallibacterium anatis UMN179] gi|330432302|gb|AEC17361.1| DNA repair protein RecO [Gallibacterium anatis UMN179] Length = 220 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 69/222 (31%), Gaps = 12/222 (5%) Query: 20 IILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQNLGEFRFEVLESH 77 +++++ T YG + ++ R + +LQ + + W R + Sbjct: 1 MLVDLFTEHYGCITLLAKGARAKRSPLKSLLQPFTPLLLRWSGRGTLK---ILTKAEAIS 57 Query: 78 CAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK-IPSVIGKIFVQIEL 136 + + G L R L + EL+ L + + E Sbjct: 58 VTLPMQTVALYSGFYVNELLVRTLEQETAYPELFHEYLRCLTGLAANGDQVEATLRRFEF 117 Query: 137 MLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQT 196 MLLK +G+G+D C +G + L + Sbjct: 118 MLLKALGYGIDFEHCAGSGEPVAAEMTYQYREEKGFIASLLKNNLTFYGRDLQAFANLSF 177 Query: 197 IDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 + ++L++A + T + AL+ + RE F L Sbjct: 178 NEKETLQAAKRFT-----RIALKPFLGGKPLKSRELFQQHLN 214 >gi|168493730|ref|ZP_02717873.1| DNA repair protein RecO [Streptococcus pneumoniae CDC3059-06] gi|183576233|gb|EDT96761.1| DNA repair protein RecO [Streptococcus pneumoniae CDC3059-06] Length = 256 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 71/202 (35%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q L R R Sbjct: 5 ITSQGLVLYNRNFREDDKLVKIFTEQVGKRMFFVKHAGQSKLAPVIQPLVLARFLLRIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + Y L + + L+ L L + Sbjct: 65 DGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L+ +CV S K G +C + Sbjct: 125 AGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDDRR 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q ID ++L Sbjct: 185 CHLNPNIPYLLNQFQAIDFETL 206 >gi|167041436|gb|ABZ06188.1| putative Recombination protein O [uncultured marine microorganism HF4000_006O13] gi|167041993|gb|ABZ06730.1| putative Recombination protein O [uncultured marine microorganism HF4000_141E02] Length = 245 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 73/214 (34%), Gaps = 6/214 (2%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 ++ Y E + I+ + ++ YGR + + + + LQ ++++W + Sbjct: 13 YLMHQMPYSETSQIVRIFSQNYGRVDLIAKGSKRPKSKFRSFLQPFLPLQLSWSGKSQLK 72 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 R + + L + FL +P L+ + L+ + Sbjct: 73 T--LREAEIHGQYLTRIQGKHLLSAYYLNELILSFLRMEDPYQNLFALYASALHGFSESN 130 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCV--VTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I I Q E+++L IG+ ++ + DL +V G V + + Sbjct: 131 PIEPILRQFEILMLSEIGYAINFETEALSQKPIEADLDYVFIAEQGFVSKRNHNSSPFVV 190 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYA 217 + D ++L A ++ + + + Sbjct: 191 QGQVIQAINQGNFSDQETLVFAKKILRWSIEYHL 224 >gi|323350852|ref|ZP_08086510.1| recombination protein O [Streptococcus sanguinis VMC66] gi|322122834|gb|EFX94540.1| recombination protein O [Streptococcus sanguinis VMC66] gi|327488721|gb|EGF20521.1| recombination protein O [Streptococcus sanguinis SK1058] Length = 257 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 2/201 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q + + Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLAPVIQPLTAANLLMKINDD 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ + ++ + Y L + +P L+ L L Sbjct: 66 GLSYIEDYQDVVTYHRINEDLFIMAYASYVAALADASLQDNQPDPALFAFLQKTLELMNN 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ C T S K G +C + Sbjct: 126 GLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPDHYHQDERRC 185 Query: 184 LVLP--SFLWKEEQTIDADSL 202 + P FL + Q + L Sbjct: 186 YLNPNLPFLLDQFQAVRFSEL 206 >gi|164686275|ref|ZP_02210305.1| hypothetical protein CLOBAR_02713 [Clostridium bartlettii DSM 16795] gi|164601877|gb|EDQ95342.1| hypothetical protein CLOBAR_02713 [Clostridium bartlettii DSM 16795] Length = 254 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 68/222 (30%), Gaps = 17/222 (7%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 I+L Y E ++IL + TR+ G+ + + + + + + Sbjct: 3 IVNTQGIVLRAVKYKENDLILTIFTRKLGKISAIAKGARRTKSALLSSCQVFAYSTFTLK 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNC 120 N+ + ++ I+ L + + + L+ +L L Sbjct: 63 KQGNMYRVTQTEIIKSFYEISYDLDIFSYATYIIQLIDYNVEDEVTNNRLFILLAQTLYL 122 Query: 121 HKIPSVIG-KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + I EL L+ IGF + +C G V G V Sbjct: 123 LAKEEIDIVFIKDVFELKFLEYIGFKPIVNRCSNCGSKNLNNSVFNIYEGGVICENCRE- 181 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN 221 L++ ID ++ +L +Y LN L N Sbjct: 182 ----------LFEYNMKIDLTTI----RLMEYILNNDILTCN 209 >gi|319945960|ref|ZP_08020210.1| recombination protein O [Streptococcus australis ATCC 700641] gi|319748025|gb|EFW00269.1| recombination protein O [Streptococcus australis ATCC 700641] Length = 259 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 65/188 (34%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 + I+L R Y E + ++++ T Q G+ + FV++ R+ ++Q L + + Sbjct: 5 IESRGIVLYHRDYREDDKLVKIFTEQAGKLMFFVKHANRSRLNSMIQPLTLADMYLKITD 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 ++S Y + + +R+P L+ L L Sbjct: 65 DGLSYIEDIHEVQSFQGINQDLFRLSYATYILALADASIQDRQPDPALFAFLEQTLQLMD 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L++ +C V S + GG +C + Sbjct: 125 RGLDYEILTNIFEMQILSRFGVALNVHECCVCHRVGLPFDFSFRLGGVLCPDHYDRDERR 184 Query: 183 MLVLPSFL 190 P+ L Sbjct: 185 AHWDPNAL 192 >gi|228476695|ref|ZP_04061364.1| DNA repair protein RecO [Streptococcus salivarius SK126] gi|228251644|gb|EEK10741.1| DNA repair protein RecO [Streptococcus salivarius SK126] Length = 257 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 69/203 (33%), Gaps = 2/203 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + ++L R+Y E + ++++ T Q G+ + FVR G S ++ ++Q + Sbjct: 5 ESRGLVLFNRNYRENDKLVKIFTEQAGKRMFFVRGGGSGKLSAVIQPLTIAEFMMTVNDE 64 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + ES Y + + +L+ L L + Sbjct: 65 GLSFIEDYSQAESFKEITSDIFKLSYATYLASLTDAAIADGVADAQLFAFLEKTLELMEE 124 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ +CV S K G +C + + Sbjct: 125 GLDYEILTNIFEIQVLDRFGVRLNFHECVFCHRVGLPFDFSYKFSGLLCPNHYAEDERRS 184 Query: 184 LVLP--SFLWKEEQTIDADSLKS 204 + P +L Q + + L+S Sbjct: 185 HLNPNVPYLLDRFQGLSFEELRS 207 >gi|148987756|ref|ZP_01819219.1| DNA repair protein RecO [Streptococcus pneumoniae SP6-BS73] gi|147926220|gb|EDK77293.1| DNA repair protein RecO [Streptococcus pneumoniae SP6-BS73] Length = 256 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 71/202 (35%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q L R R Sbjct: 5 ITSQGLVLYNRNFREDDKLVKIFTEQVGKCMFFVKHAGQSKLAPVIQPLVLARFLLRIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + Y L + + L+ L L + Sbjct: 65 DGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L+ +CV S K G +C + Sbjct: 125 TGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDKRR 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q ID ++L Sbjct: 185 CHLNPNIPYLLNQFQAIDFETL 206 >gi|150390774|ref|YP_001320823.1| DNA repair protein RecO [Alkaliphilus metalliredigens QYMF] gi|172052484|sp|A6TSJ6|RECO_ALKMQ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|149950636|gb|ABR49164.1| DNA repair protein RecO [Alkaliphilus metalliredigens QYMF] Length = 246 Score = 89.9 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 73/209 (34%), Gaps = 5/209 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR- 59 M + + +L R YGE + +L + T++ G+ + + + + ++ Sbjct: 1 MLIKTEGFVLRNRKYGETDSMLVIFTKKVGKINAIAKGARRTKSALLAGVQPFSYSDFVL 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + E E Y + + E + L+++L L+ Sbjct: 61 FKGRSLYTVNQTEPKEIFYNLREDVKRLSYAAYLLELVESVTEEGQTNNRLFNLLGRTLH 120 Query: 120 CHKIPSVI-GKIFVQIELMLLKNIGFGLDLTKCVVTGVT-QDLLWVSPKSGGAVCRSVGL 177 K + I EL L++ G LT CV G T + S K GG +C Sbjct: 121 LMKKEEIELETILRAFELKLMEYSGLKPHLTSCVSCGQTSSNSWRFSSKEGGLICHQCHG 180 Query: 178 --PYAEKMLVLPSFLWKEEQTIDADSLKS 204 ++ K+ VL L D + ++ Sbjct: 181 IDSFSIKINVLTVKLANYLLAKDMEEIQK 209 >gi|90021886|ref|YP_527713.1| DNA replication and repair protein RecO [Saccharophagus degradans 2-40] gi|89951486|gb|ABD81501.1| DNA replication and repair protein RecO [Saccharophagus degradans 2-40] Length = 235 Score = 89.9 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 73/234 (31%), Gaps = 12/234 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 D+A IL R+Y + II+E T +GR G R R Q L ++WR Sbjct: 10 TDNAYILHSRAYTDSRIIIEFFTENHGRVAGIFRLPSKKRH-FKPQPFTLYTIHWRWGAE 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 F + + L GL + R L + +P E++ N L Sbjct: 69 LKTILFLDPIANAEA---LVGKASYCGLYLNELVLRLLSKEDPSPEIFAAYNAALKGLVG 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT---QDLLWVSPKSGGAVCRSVGLPYA 180 + EL +L +G+ +D + ++ G SVG Sbjct: 126 GQELEAPLRHFELGILAELGYAVDFDFDSSGNPIAASNSVAYLFKVGEGFSLYSVGQKQV 185 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFL 233 + + +K A + + L + RE FL Sbjct: 186 GHVYSGAVLRDISARNFSNTPVKKAAKQIC----RACLAPLLGAKPLKSRELFL 235 >gi|257865834|ref|ZP_05645487.1| recombination protein O [Enterococcus casseliflavus EC30] gi|257872169|ref|ZP_05651822.1| recombination protein O [Enterococcus casseliflavus EC10] gi|257875462|ref|ZP_05655115.1| recombination protein O [Enterococcus casseliflavus EC20] gi|257799768|gb|EEV28820.1| recombination protein O [Enterococcus casseliflavus EC30] gi|257806333|gb|EEV35155.1| recombination protein O [Enterococcus casseliflavus EC10] gi|257809628|gb|EEV38448.1| recombination protein O [Enterococcus casseliflavus EC20] Length = 257 Score = 89.9 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 26/187 (13%), Positives = 56/187 (29%), Gaps = 3/187 (1%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M + I+L + + EK+ ++++ T G+ + +V+ + + Sbjct: 1 MNLVETKGILLFSKDHKEKDKLVKIFTESAGKQMFYVKGAHRKNNPLAPALLSYTEATYM 60 Query: 60 S--RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + + + Y + + +R LY L+ Sbjct: 61 GTIKTEGLSFLNNAKDIHPFRTIQSDIFIAGYATYLLNLADSAIDDRVYDPHLYQFLHEA 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + I E+ +L G + T C + G T S K G +C Sbjct: 121 LQLMDQENDAEIITNIFEIQILHRFGITPNWTHCAICGKTDGRFDYSSKYSGILCEQHWG 180 Query: 178 PYAEKML 184 + Sbjct: 181 MDERRYH 187 >gi|297626096|ref|YP_003687859.1| DNA repair protein recO (Recombination protein O) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921861|emb|CBL56421.1| DNA repair protein recO (Recombination protein O) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 247 Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 73/205 (35%), Gaps = 8/205 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+A++L GE + I+ +++R +G+ R + S + L+ N V V + Sbjct: 4 YRDEAVVLRTHKLGEADRIITLLSRTHGKVRAVARGVRRTSSKFGGRLEPCNHVDVQFAV 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLNIFLN 119 + ++ + L+ G + R + P L+ Y +L L Sbjct: 64 GRSLDIVTQVECLHPYGDPLTRDYVLYTTGETMLEVADRLVAVENEPSLQQYRLLVGALR 123 Query: 120 CHKI--PSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + ++ LL+++ G+ L C GV W SP GG VC Sbjct: 124 VLGQGTSDGPRPATMVLDSYLLRSLAVAGYAPVLDSCAKCGVMGQQEWFSPSIGGMVCSG 183 Query: 175 VGLPYAEKMLVLPSFLWKEEQTIDA 199 P + + + D Sbjct: 184 CRPPGSARPEPESWQFLGALMSGDW 208 >gi|148996442|ref|ZP_01824160.1| DNA repair protein RecO [Streptococcus pneumoniae SP11-BS70] gi|168576928|ref|ZP_02722770.1| DNA repair protein RecO [Streptococcus pneumoniae MLV-016] gi|194397697|ref|YP_002036757.1| DNA repair protein RecO [Streptococcus pneumoniae G54] gi|307066717|ref|YP_003875683.1| recombinational DNA repair ATPase [Streptococcus pneumoniae AP200] gi|238690829|sp|B5E5I5|RECO_STRP4 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|147757017|gb|EDK64056.1| DNA repair protein RecO [Streptococcus pneumoniae SP11-BS70] gi|183577428|gb|EDT97956.1| DNA repair protein RecO [Streptococcus pneumoniae MLV-016] gi|194357364|gb|ACF55812.1| DNA repair protein RecO [Streptococcus pneumoniae G54] gi|306408254|gb|ADM83681.1| Recombinational DNA repair protein (RecF pathway) [Streptococcus pneumoniae AP200] gi|332201965|gb|EGJ16034.1| DNA repair protein RecO [Streptococcus pneumoniae GA41317] Length = 256 Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 71/202 (35%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q L R R Sbjct: 5 ITSQGLVLYNRNFREDDKLVKIFTEQVGKCMFFVKHAGQSKLAPVIQPLVLARFLLRIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + Y L + + L+ L L + Sbjct: 65 DGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L+ +CV S K G +C + Sbjct: 125 AGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDERR 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q ID ++L Sbjct: 185 CHLNPNIPYLLNQFQAIDFETL 206 >gi|325569849|ref|ZP_08145843.1| recombination protein O [Enterococcus casseliflavus ATCC 12755] gi|325156972|gb|EGC69140.1| recombination protein O [Enterococcus casseliflavus ATCC 12755] Length = 257 Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 26/187 (13%), Positives = 57/187 (30%), Gaps = 3/187 (1%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M + I+L + + EK+ ++++ T G+ + +V+ + + Sbjct: 1 MNLVETKGILLFSKDHKEKDKLVKIFTESAGKQMFYVKGAHRKNNPLAPALLSYTEATYM 60 Query: 60 S--RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + + + Y + + +R LY L+ Sbjct: 61 GTIKTEGLSFLNNAKDIHPFRTIQSDIFIAGYATYLLNLADSAIDDRVYDPHLYQFLHEA 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L+ + I E+ +L G + T C + G T S K G +C Sbjct: 121 LHLMDQGNDAEIITNIFEIQILHRFGITPNWTHCAICGKTDGRFDYSSKYSGILCEQHWG 180 Query: 178 PYAEKML 184 + Sbjct: 181 MDERRYH 187 >gi|325203553|gb|ADY99006.1| DNA repair protein RecO [Neisseria meningitidis M01-240355] Length = 263 Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 72/234 (30%), Gaps = 16/234 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L + V +W Sbjct: 12 FLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVSFVPVSASWYGSQELK 71 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 V GL + + +P ELYD L + + Sbjct: 72 TLHRAEWVGGWRQP---QGRALFSGLYVNELVLKLTAREDPMPELYDALAKVMEAVCREA 128 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV----CRSVGLPYAE 181 + E LL +G DL G AV + L + Sbjct: 129 NHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVCEDADALSHEA 188 Query: 182 KMLVLPSFLWK--EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +V L E A+SL+ A ++T F+ L + R+ Sbjct: 189 GAIVEGQSLIDLREGSFRTAESLQQALKITRLFI--RHLLPEGL---KSRQVLE 237 >gi|166712831|ref|ZP_02244038.1| DNA repair protein RecO [Xanthomonas oryzae pv. oryzicola BLS256] Length = 240 Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 56/167 (33%), Gaps = 7/167 (4%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM---QPILQAGNLVRV 56 M + + +L VR++ E ++++EV+T Q+GR R R + LQ L++ Sbjct: 1 MLIKHERGFVLHVRAWRETSLLVEVLTEQHGRVGLLARGVHGPRKQALRAALQPLQLIQF 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R + A L L G L R P +P ELY Sbjct: 61 SAVQRGELAQLRQAEALD---TAPRLVGDTMLAGFYISELLLRLAPRNDPVPELYACYAQ 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV 163 + + E +L+ +GF DL Sbjct: 118 ARTHLAADLPLAWGLRRFERDVLEGLGFAFDLQHDSDGQPIDPAARY 164 >gi|58581480|ref|YP_200496.1| DNA repair protein RecO [Xanthomonas oryzae pv. oryzae KACC10331] gi|84623410|ref|YP_450782.1| DNA repair protein RecO [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188577280|ref|YP_001914209.1| DNA repair protein RecO [Xanthomonas oryzae pv. oryzae PXO99A] gi|67461245|sp|Q5H1R0|RECO_XANOR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361498|sp|Q2P4L9|RECO_XANOM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238689547|sp|B2SRX5|RECO_XANOP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|58426074|gb|AAW75111.1| DNA repair protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84367350|dbj|BAE68508.1| DNA repair protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188521732|gb|ACD59677.1| DNA repair protein RecO [Xanthomonas oryzae pv. oryzae PXO99A] Length = 240 Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 56/167 (33%), Gaps = 7/167 (4%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM---QPILQAGNLVRV 56 M + + +L VR++ E ++++EV+T Q+GR R R + LQ L++ Sbjct: 1 MLIEHERGFVLHVRAWRETSLLVEVLTEQHGRVGLLARGVHGPRKQALRAALQPLQLIQF 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R + A L L G L R P +P ELY Sbjct: 61 SAVQRGELAQLRQAEALD---TAPRLVGDTMLAGFYISELLLRLAPRNDPVPELYACYTQ 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV 163 + + E +L+ +GF DL Sbjct: 118 ARTHLAADLPLAWGLRRFERDVLEGLGFAFDLQHDSDGQPIDPAARY 164 >gi|306828474|ref|ZP_07461669.1| recombination protein O [Streptococcus mitis ATCC 6249] gi|304429273|gb|EFM32358.1| recombination protein O [Streptococcus mitis ATCC 6249] Length = 256 Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 73/202 (36%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q L R R Sbjct: 5 ITSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLAPVIQPLVLARFLLRIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + Y L + + L+ L L + Sbjct: 65 DGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLRKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G GL+ +CV S K G +C ++ Sbjct: 125 EGLDYQVLTNIFEIQILNRFGIGLNFNECVFCHRVGQAFDFSFKYGACLCPDHYHEDEKR 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q ID ++L Sbjct: 185 CHLNPNIPYLLNQFQAIDFETL 206 >gi|325208739|gb|ADZ04191.1| DNA repair protein RecO [Neisseria meningitidis NZ-05/33] Length = 264 Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 71/234 (30%), Gaps = 16/234 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L + V +W Sbjct: 13 FLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVSFVPVSASWYGSQELK 72 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 V GL + + +P ELYD L + + Sbjct: 73 TLHRAEWVGGWRQP---QGRALFSGLYVNELVLKLTAREDPMPELYDALAKVMEAVCREA 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV----GLPYAE 181 + E LL +G DL G AV L + Sbjct: 130 NHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVCRDTDALSHEA 189 Query: 182 KMLVLPSFLWK--EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +V L E A+SL+ A ++T F+ L + R+ Sbjct: 190 GAIVEGQSLIDLREGSFRTAESLQQALKITRLFI--RHLLPEGL---KSRQVLE 238 >gi|325202743|gb|ADY98197.1| DNA repair protein RecO [Neisseria meningitidis M01-240149] Length = 263 Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 71/234 (30%), Gaps = 16/234 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L + V +W Sbjct: 12 FLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVSFVPVSASWYGSQELK 71 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 V GL + + +P ELYD L + + Sbjct: 72 TLHRAEWVGGWRQP---QGRALFSGLYVNELVLKLTAREDPMPELYDALAKVMEAVCREA 128 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV----GLPYAE 181 + E LL +G DL G AV L + Sbjct: 129 NHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVCRDTDALSHEA 188 Query: 182 KMLVLPSFLWK--EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +V L E A+SL+ A ++T F+ L + R+ Sbjct: 189 GAIVEGQSLIDLREGSFRTAESLQQALKITRLFI--RHLLPEGL---KSRQVLE 237 >gi|325198870|gb|ADY94326.1| DNA repair protein RecO [Neisseria meningitidis G2136] Length = 248 Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 71/234 (30%), Gaps = 16/234 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L + V +W Sbjct: 13 FLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVSFVPVSASWYGSQELK 72 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 V GL + + +P ELYD L + + Sbjct: 73 TLHRAEWVGGWRQP---QGRALFSGLYVNELVLKLTAREDPMPELYDALAKVMEAVCREA 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV----GLPYAE 181 + E LL +G DL G AV L + Sbjct: 130 NHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVCRDTDALSHEA 189 Query: 182 KMLVLPSFLWK--EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +V L E A+SL+ A ++T F+ L + R+ Sbjct: 190 GAIVEGQSLIDLREGSFRTAESLQQALKITRLFI--RHLLPEGL---KSRQVLE 238 >gi|320106411|ref|YP_004182001.1| DNA repair protein RecO [Terriglobus saanensis SP1PR4] gi|319924932|gb|ADV82007.1| DNA repair protein RecO [Terriglobus saanensis SP1PR4] Length = 245 Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 54/154 (35%), Gaps = 2/154 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR 61 QD+AI+L + E ++++ + TR GR G R+ R + L+ VR NW + Sbjct: 5 QDEAIVLRTWPFQEADLLVSLFTRHQGRVKGVARHAMRSRRRFGGALEPMTYVRANWAEK 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 Q L + + L + + + + L + Sbjct: 65 PRQELVRLNSFEILWSPLREPVDYARSAALSVVAEVLESALPEQAPEDDVFRLALTTIER 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + L + + +G+ DL+ C V G Sbjct: 125 MQVGEVWLPVTYFLLWVTRLLGWMPDLSSCAVCG 158 >gi|182418477|ref|ZP_02949771.1| DNA repair protein RecO [Clostridium butyricum 5521] gi|237666513|ref|ZP_04526498.1| DNA repair protein RecO [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377859|gb|EDT75403.1| DNA repair protein RecO [Clostridium butyricum 5521] gi|237657712|gb|EEP55267.1| DNA repair protein RecO [Clostridium butyricum E4 str. BoNT E BL5262] Length = 249 Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 78/249 (31%), Gaps = 19/249 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SR 61 ++ A+I+ + Y E + ++ T + G+ VR + + + + L + + Sbjct: 7 FETKAVIIKTQDYRENDKLVWFYTEKLGKITAIVRGAKKSKSKFLSLTLPLCYGEYMVYK 66 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 +++ S L + Y + E E +L+ L L Sbjct: 67 GKNLYTLQEGKIINSFQGLLNNLDKLTYSSYLCELIDIACEENEVNEKLFKDLVTILYLL 126 Query: 122 KIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV-SPKSGGAVCRSVGLPY 179 + E+ LLK G+ L L C + + S S G VC + Sbjct: 127 NTDVLDYEILIRAFEIKLLKATGYSLTLDTCSICRKRLGVSNYISLSSFGGVCEECPKEH 186 Query: 180 ----------AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLR 229 A + L+ + ++ + ++T +F+ +N Sbjct: 187 GVYISKGAYNALRYLMTVNVDKLYRLNLNNEIKHEIEKVTTFFI-----ANNYTKKPKS- 240 Query: 230 ENFLGKLLE 238 L + E Sbjct: 241 LEMLKFIKE 249 >gi|312867000|ref|ZP_07727211.1| DNA repair protein RecO [Streptococcus parasanguinis F0405] gi|311097482|gb|EFQ55715.1| DNA repair protein RecO [Streptococcus parasanguinis F0405] Length = 259 Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 65/188 (34%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 + I+L R + E + ++++ T + G+ + FV++ R+ P+LQ + + Sbjct: 5 IETRGIVLYNREFREDDKLVKIFTEKSGKRMFFVKHAGKSRLSPMLQPLVTADMLLKIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 F+ ++ + Y + + + + L+ L L+ + Sbjct: 65 DGLSYIDDFQDVQVYKKINADLFALSYATYVLALADASIQDNQVDPALFAFLEKTLSLME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ LL G L+L +C S + G +C + Sbjct: 125 EGLDYEVLTNIFEIQLLSRFGVVLNLHECCFCHRVGLPFDYSFRYSGVLCPDHYDRDERR 184 Query: 183 MLVLPSFL 190 P+ L Sbjct: 185 AHWHPNVL 192 >gi|319787578|ref|YP_004147053.1| DNA repair protein RecO [Pseudoxanthomonas suwonensis 11-1] gi|317466090|gb|ADV27822.1| DNA repair protein RecO [Pseudoxanthomonas suwonensis 11-1] Length = 244 Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 35/236 (14%), Positives = 72/236 (30%), Gaps = 16/236 (6%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRV 56 M + + A +L R + E ++++EV++ +GR R S + ++ LQ +R Sbjct: 1 MRIEGETAFVLHARPWRETSLLVEVLSEGHGRLGLVARGVGSPKRQVLRAALQPLQHIRF 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + + A L + L + R P ++P +L+D Sbjct: 61 DAVLAGELAQLRGAEALD---SAPRLCGQVQLAAFYLNELVLRLAPRQDPLPDLFDAYAR 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV----SPKSGGAVC 172 + + E LL +G G +L + + Sbjct: 118 TRAALVEGGSLAWTLRRFERDLLGALGVGFELDVDGDGEPVDPAARYRLDPEHGARRLLS 177 Query: 173 RSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL 228 + DA+ L ++ +L + L H++ L Sbjct: 178 DRGHGERNAAATGRALLALAADVQPDAEDL-ASLRLP----LRAVLAHHLGPRPLA 228 >gi|322388507|ref|ZP_08062109.1| recombination protein O [Streptococcus infantis ATCC 700779] gi|321140625|gb|EFX36128.1| recombination protein O [Streptococcus infantis ATCC 700779] Length = 256 Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 72/202 (35%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q L + Sbjct: 5 ITSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLAPVIQPLVLAHFLLKVND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + +++ + Y L + + L+ L L + Sbjct: 65 DGLSYIEDYHEVKTFPKINSDLFVMAYATYVAALADASLQDNQEDAPLFTFLQKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L+ +C S K GG +C ++ Sbjct: 125 EGLDYQVLTNIFEIQILTRFGISLNFNECTFCHRVGQAFDFSFKYGGCLCPDHYHEDEKR 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q ID ++L Sbjct: 185 CHLNPNIPYLLNQFQAIDFETL 206 >gi|307704643|ref|ZP_07641544.1| DNA repair protein RecO [Streptococcus mitis SK597] gi|307621796|gb|EFO00832.1| DNA repair protein RecO [Streptococcus mitis SK597] Length = 256 Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 71/202 (35%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q L R R Sbjct: 5 ITSQGLVLYNRNFRENDKLVKIFTEQAGKRMFFVKHTGQSKLAPVIQPLVLARFLLRIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + Y L + + L+ L L + Sbjct: 65 DGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L+ +CV S K G +C + Sbjct: 125 AGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRIGQAFDFSFKYGACLCPEHYHEDERR 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q ID ++L Sbjct: 185 CHLNPNIPYLLNQFQAIDFETL 206 >gi|289670318|ref|ZP_06491393.1| DNA repair protein RecO [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 240 Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 55/167 (32%), Gaps = 7/167 (4%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM---QPILQAGNLVRV 56 M + + +L VR++ E ++++EV+T Q+GR R R + LQ L++ Sbjct: 1 MLIEHERGFVLHVRAWRETSLLVEVLTEQHGRVGLLARGVHGPRKHALRAALQPLQLIQF 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R + A L L G L R P + ELY Sbjct: 61 SAVQRGELAQLRQAEALD---TAPRLVGETMLAGFYISELLLRLAPRNDSVPELYACYAQ 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV 163 + + E +L+ +GF DL Sbjct: 118 ARTHLASNLPLAWGLRRFERDVLEGLGFAFDLQHDSDGQPIDPAARY 164 >gi|289423883|ref|ZP_06425676.1| DNA repair protein RecO [Peptostreptococcus anaerobius 653-L] gi|289155660|gb|EFD04332.1| DNA repair protein RecO [Peptostreptococcus anaerobius 653-L] Length = 248 Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 72/229 (31%), Gaps = 10/229 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS-R 61 A++L + E +IIL + TR YG+ R Q + + I + N+ + Sbjct: 4 INTQAVVLKALKFKENDIILTLFTRNYGKVSAIARGAQKPKSKLIATSQVFSYNNYVLRK 63 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 ++ E ++S F Y + + L E + L+ +L L + Sbjct: 64 QNDMYVVYQSESIKSFYNIATDFDAFSYASFIMKLVEGVLVEGQTNNRLFVLLVRTLFLY 123 Query: 122 KIPSVIG-KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 I + L GF ++ C T V S G + + Sbjct: 124 SEGVDNPKFILDAFIVKFLDYTGFKPNVDACTSCSSTNYRKAVFSISDGGIVCDKCIKKQ 183 Query: 181 EKMLV--------LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN 221 E L + L + I+ + +FL K L + Sbjct: 184 ENYLKIDQTTIRLMQYILKNDIIDINKAEVAKVLVDELFFLLKKYLINY 232 >gi|183602375|ref|ZP_02963741.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis HN019] gi|219683310|ref|YP_002469693.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis AD011] gi|241191271|ref|YP_002968665.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196677|ref|YP_002970232.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis DSM 10140] gi|254790512|sp|B8DSY8|RECO_BIFA0 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|183218294|gb|EDT88939.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis HN019] gi|219620960|gb|ACL29117.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis AD011] gi|240249663|gb|ACS46603.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251231|gb|ACS48170.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289177386|gb|ADC84632.1| RecO [Bifidobacterium animalis subsp. lactis BB-12] gi|295794264|gb|ADG33799.1| DNA repair protein RecO [Bifidobacterium animalis subsp. lactis V9] Length = 239 Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 74/205 (36%), Gaps = 7/205 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D+A++L GE + I+ ++TR +G+ + + + + L+ V + Sbjct: 4 YRDEAVVLRTAKLGEADRIITLLTRDHGKVRAVAKGVRRTKSRFGARLEPFMRVDLLL-G 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCL--ELYDMLNIFL 118 + E + ++ + ++ L E Y +L L Sbjct: 63 EGRTFDSVRQAESISAYAGGITGDYATYTAASAMCETAADLLPAEHEPAAAQYRLLIAAL 122 Query: 119 NCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + L + G+ + L CVV G QD+ + S +GGA+C + Sbjct: 123 GALSRHLHDPQAIALSYILRAMSLAGWTIRLDSCVVCGS-QDVEFFSASAGGAMCPNDHT 181 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSL 202 P A ++ V + + D L Sbjct: 182 PDAVRVPVHVFDQLRALEQGDWPQL 206 >gi|119471907|ref|ZP_01614215.1| DNA repair protein recO (Recombination protein O) [Alteromonadales bacterium TW-7] gi|119445280|gb|EAW26570.1| DNA repair protein recO (Recombination protein O) [Alteromonadales bacterium TW-7] Length = 230 Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 71/230 (30%), Gaps = 13/230 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVR--NGQSHRMQPILQAGNLVRVNWRSRLA 63 A +L R Y + ++L+++ G+ R Q+ + + LQ + V++ + Sbjct: 7 TAYLLHRRPYSDSQVMLDMLVEGVGQLRMIARISGRQATKHKAQLQPFQPLLVHYSGKYD 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + LS G R +P EP + Y++ L Sbjct: 67 LK---YINKFELHGAPLFLSGDELYCGFYLNELTNRIVPVNEPIEQAYELYKSHLENLNR 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + + E LL+ +G+G+D + + L S S Sbjct: 124 GVNLQSVLRSYEFQLLELLGYGVDFSFDTNGEPIDEALTYSYFSELGFVIQ---EDTRSG 180 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + L++Y L+ + + RE F Sbjct: 181 FSGEQLQAIANHDFSRKDVLYMAK----QLSRYLLKPLLGNKPLKSRELF 226 >gi|322378207|ref|ZP_08052691.1| DNA repair protein RecO [Streptococcus sp. M334] gi|321280837|gb|EFX57853.1| DNA repair protein RecO [Streptococcus sp. M334] Length = 256 Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 72/202 (35%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q L R R Sbjct: 5 ITSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLAPVIQPLVLARFLLRIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + Y L + + L+ L L + Sbjct: 65 DGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + + E+ +L G L+ +CV S K G +C + Sbjct: 125 VGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDERR 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q ID ++L Sbjct: 185 CHLNPNIPYLLNQFQAIDFETL 206 >gi|289662801|ref|ZP_06484382.1| DNA repair protein RecO [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 240 Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 54/167 (32%), Gaps = 7/167 (4%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM---QPILQAGNLVRV 56 M + + +L R++ E ++++EV+T Q+GR R R + LQ L++ Sbjct: 1 MLIEHERGFVLHARAWRETSLLVEVLTEQHGRVGLLARGVHGPRKHALRAALQPLQLIQF 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R + A L L G L R P + ELY Sbjct: 61 SAVQRGELAQLRQAEALD---TAPRLVGETMLAGFYISELLLRLAPRNDSVPELYACYAQ 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV 163 + + E +L+ +GF DL Sbjct: 118 ARTHLASNLPLAWGLRRFERDVLEGLGFAFDLQHDSDGQPIDPAARY 164 >gi|78046935|ref|YP_363110.1| DNA repair protein RecO [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325926992|ref|ZP_08188267.1| DNA replication and repair protein RecO [Xanthomonas perforans 91-118] gi|90103527|sp|Q3BVV3|RECO_XANC5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|78035365|emb|CAJ23010.1| putative DNA repair protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325542651|gb|EGD14118.1| DNA replication and repair protein RecO [Xanthomonas perforans 91-118] Length = 240 Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 56/167 (33%), Gaps = 7/167 (4%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM---QPILQAGNLVRV 56 M + + +L VR++ E ++++EV+T Q+GR R Q R + LQ L++ Sbjct: 1 MLIEHERGFVLHVRAWRETSLLVEVLTEQHGRVGLLARGVQGPRKQALRAALQPLQLIQF 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R + A L L G L R P +P ELY Sbjct: 61 SAVQRGELAQLRQAEALD---TAPRLVGDTMLAGFYISELLLRLAPRNDPVPELYACYAQ 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV 163 + + E +L +GF DL Sbjct: 118 ARTYLASDLPLAWGLRRFERDVLDGLGFAFDLQHDSDGQPIDPAARY 164 >gi|306826213|ref|ZP_07459547.1| recombination protein O [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431489|gb|EFM34471.1| recombination protein O [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 256 Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 72/203 (35%), Gaps = 2/203 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q L R R Sbjct: 5 ITSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLAPVIQPLVLARFLLRIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + Y L + + L+ L L + Sbjct: 65 DGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L+ +CV S K G +C + Sbjct: 125 AGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDERR 184 Query: 183 MLVLP--SFLWKEEQTIDADSLK 203 + P +L + Q ID D+LK Sbjct: 185 CHLNPNIPYLLNQFQAIDFDTLK 207 >gi|270291675|ref|ZP_06197891.1| DNA repair protein RecO [Streptococcus sp. M143] gi|270279760|gb|EFA25601.1| DNA repair protein RecO [Streptococcus sp. M143] Length = 256 Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 71/202 (35%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q L R R Sbjct: 5 ITSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLAPVIQPLVLARFLLRIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + Y L + + L+ L L + Sbjct: 65 DGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L+ +CV S K G +C + Sbjct: 125 EGLDYQVLTNIFEIQILTRFGLSLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDERR 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q ID ++L Sbjct: 185 CHLNPNIPYLLNQFQAIDFETL 206 >gi|303254138|ref|ZP_07340252.1| DNA repair protein RecO [Streptococcus pneumoniae BS455] gi|302598892|gb|EFL65924.1| DNA repair protein RecO [Streptococcus pneumoniae BS455] Length = 256 Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 71/202 (35%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q L R R Sbjct: 5 ITSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLAPVIQPLVLARFLLRIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + Y L + + L+ L L + Sbjct: 65 DGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L+ +CV S K G +C + Sbjct: 125 AGLDYQILTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHCHEDERR 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q ID ++L Sbjct: 185 CHLNPNIPYLLNQFQAIDFETL 206 >gi|167623019|ref|YP_001673313.1| DNA repair protein RecO [Shewanella halifaxensis HAW-EB4] gi|167353041|gb|ABZ75654.1| DNA repair protein RecO [Shewanella halifaxensis HAW-EB4] Length = 251 Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 31/239 (12%), Positives = 68/239 (28%), Gaps = 12/239 (5%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWRS 60 + +L R + + ++I+ ++ GR R + ++ ILQ + + Sbjct: 21 IIMERGYVLHSRHFRDSSVIVNLLVDGKGRVDAVARLGSAKNSIRSILQPFQPLIFQLQG 80 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + + A L+ GL L R L + L+ + L Sbjct: 81 KSELKT---LKQTEAASPAVPLTGDCLYSGLYLNELLIRCLSGQHNAENLFFDYHRTLIA 137 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ E LL+ +G L + + + Sbjct: 138 MATKFDQSQLR-YFEHALLRELGTMPSLDFDPSDAPITASGCYRLEQTHGFTPVITTEFN 196 Query: 181 -EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 K + +QT+ + A + L + L + R F+ + Sbjct: 197 RHKYFSGEMLVALNQQTLTMEHYSEAKR-----LMRQLLAPILGDKPLHSRSLFIKQTK 250 >gi|327472025|gb|EGF17464.1| recombination protein O [Streptococcus sanguinis SK408] Length = 257 Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 67/201 (33%), Gaps = 2/201 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q + + Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHASKSKLAPVIQPLTAANLLMKINDD 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ + ++ + Y L + + L+ L L Sbjct: 66 GLSYIEDYQNVVTYHRINEDLFIMAYASYVAALADASLQDNQSDPALFAFLQKTLELMNN 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ C T S K G +C + Sbjct: 126 GLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPEHYHQDERRC 185 Query: 184 LVLP--SFLWKEEQTIDADSL 202 + P FL + Q + L Sbjct: 186 HLNPNLPFLLDQFQAVRFSEL 206 >gi|324990084|gb|EGC22025.1| recombination protein O [Streptococcus sanguinis SK353] Length = 257 Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 2/201 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q + + Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLAPVIQPLTAANLLMKINDD 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ + ++ + Y L + +P L+ L L Sbjct: 66 GLSYIEDYQDVVTYHRINEDLFIMAYASYVSALADASLQDNQPDPALFAFLQKTLELMNN 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ C T S K G +C + Sbjct: 126 GLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPDHYHQDERRC 185 Query: 184 LVLP--SFLWKEEQTIDADSL 202 + P FL + Q + L Sbjct: 186 YLNPNLPFLLDQFQAVRFSEL 206 >gi|307706918|ref|ZP_07643719.1| DNA repair protein RecO [Streptococcus mitis SK321] gi|307617710|gb|EFN96876.1| DNA repair protein RecO [Streptococcus mitis SK321] Length = 256 Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 71/202 (35%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q L R R Sbjct: 5 ITSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLAPVIQPLVLARFLLRIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + Y L + + L+ L L + Sbjct: 65 DGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L+ +CV S K G +C + Sbjct: 125 AGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRIGQAFDFSFKYGACLCPDHYHEDERR 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q ID ++L Sbjct: 185 CHLNPNIPYLLNQFQAIDFETL 206 >gi|320160272|ref|YP_004173496.1| DNA repair protein RecO [Anaerolinea thermophila UNI-1] gi|319994125|dbj|BAJ62896.1| DNA repair protein RecO [Anaerolinea thermophila UNI-1] Length = 258 Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 53/170 (31%), Gaps = 4/170 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRLA 63 +A++L +GE + +L + TR+ G+ + + R L+ V+V Sbjct: 11 EAVVLRHSDWGEADRVLVLFTREQGKVRALAKGARKMLSRKAGHLEPFTHVKVLLAQGKD 70 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + L + + Y I L RF + L+ +L L+ Sbjct: 71 FWIVTQAET-LNAFLSIRADLLRTAYAALVIELLDRFTSDDGENPALFQLLVHTLSRIAT 129 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVC 172 L LL GF L C+ G Q G V Sbjct: 130 LEDPFIAVQYYHLRLLDLTGFRPQLFTCLRCGKEIQPENQFFDYQEGGVI 179 >gi|163791427|ref|ZP_02185836.1| DNA repair protein RecO, putative [Carnobacterium sp. AT7] gi|159873291|gb|EDP67386.1| DNA repair protein RecO, putative [Carnobacterium sp. AT7] Length = 270 Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 66/172 (38%), Gaps = 2/172 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS--RLA 63 + I+L VR++ E + ++++ T ++G+ + FV+ + + + + + + R Sbjct: 8 EGIVLSVRNHRENDQLVKLFTSRFGKRMFFVKGTRKQKNKLKTAVLPFTKATYIADIRDT 67 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + ++ + + L Y + L + L+ ++ L Sbjct: 68 GLCFIRDAKEVDQYKSMQTDIFLNAYATYILNLADAALDDGIVDGALFHKIDRCLTEIDE 127 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + E+ +L G +L C V G T+ S GG +C+S Sbjct: 128 ETDPEIVVNIFEVQILPYFGVSPELRGCRVCGETEGPFDYSGSYGGLLCQSH 179 >gi|294139711|ref|YP_003555689.1| DNA repair protein RecO [Shewanella violacea DSS12] gi|293326180|dbj|BAJ00911.1| DNA repair protein RecO [Shewanella violacea DSS12] Length = 230 Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 68/230 (29%), Gaps = 13/230 (5%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWRSRLA 63 + +L R + + ++++ ++ +GR R ++ ILQ + R + Sbjct: 2 ERGYVLHTRPFKDSSVLVNMLVDGHGRVDCVARLGSGKTSIKSILQPFQPLIFQLSGRTS 61 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 V A LS + G L R + L+ + L Sbjct: 62 LRNMN---SVEAGSPAIPLSGEISFSGFYLNELLVRCIAVDHGAESLFFTYHKTLMAMA- 117 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 EL LLK +G L + + + ++G + Sbjct: 118 AGFCESQLRYFELSLLKELGLMPTLRTDLGQDPIEADYYYRLLPDEGFVNALGPKTSH-- 175 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 L +E ++A LK A +L + L + R F Sbjct: 176 YSGEMLLALDEHRLEARHLKQAK-----YLMRLMLAPCLGDKPLKSRALF 220 >gi|148985379|ref|ZP_01818584.1| DNA repair protein RecO [Streptococcus pneumoniae SP3-BS71] gi|147922337|gb|EDK73457.1| DNA repair protein RecO [Streptococcus pneumoniae SP3-BS71] gi|301799221|emb|CBW31737.1| DNA repair protein RecO [Streptococcus pneumoniae OXC141] Length = 256 Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 71/202 (35%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q L R R Sbjct: 5 ITSQGLVLYNRNFREDDKLVKIFTEQVGKRMFFVKHAGQSKLAPVIQPLVLARFLLRIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + Y L + + L+ L L + Sbjct: 65 DGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L+ +CV S K G +C + Sbjct: 125 AGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDERR 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q ID ++L Sbjct: 185 CHLNPNIPYLLNQFQAIDFETL 206 >gi|15902080|ref|NP_357630.1| DNA repair protein RecO [Streptococcus pneumoniae R6] gi|116517190|ref|YP_815471.1| DNA repair protein RecO [Streptococcus pneumoniae D39] gi|225860077|ref|YP_002741586.1| DNA repair protein RecO [Streptococcus pneumoniae Taiwan19F-14] gi|298230683|ref|ZP_06964364.1| DNA repair protein RecO [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254791|ref|ZP_06978377.1| DNA repair protein RecO [Streptococcus pneumoniae str. Canada MDR_19A] gi|298501826|ref|YP_003723766.1| DNA repair protein RecO [Streptococcus pneumoniae TCH8431/19A] gi|42559474|sp|Q8DRN4|RECO_STRR6 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|122279548|sp|Q04N32|RECO_STRP2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|15457567|gb|AAK98840.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] gi|116077766|gb|ABJ55486.1| DNA repair protein RecO [Streptococcus pneumoniae D39] gi|225726945|gb|ACO22796.1| DNA repair protein RecO [Streptococcus pneumoniae Taiwan19F-14] gi|298237421|gb|ADI68552.1| DNA repair protein RecO [Streptococcus pneumoniae TCH8431/19A] gi|327390451|gb|EGE88791.1| DNA repair protein RecO [Streptococcus pneumoniae GA04375] Length = 256 Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 71/202 (35%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q L R R Sbjct: 5 ITSQGLVLYNRNFREDDKLVKIFTEQVGKRMFFVKHAGQSKLAPVIQPLVLARFLLRIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + Y L + + L+ L L + Sbjct: 65 DGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L+ +CV S K G +C + Sbjct: 125 AGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGTCLCPEHYHEDERR 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q ID ++L Sbjct: 185 CHLNPNIPYLLNQFQAIDFETL 206 >gi|332364885|gb|EGJ42653.1| recombination protein O [Streptococcus sanguinis SK355] Length = 257 Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 2/201 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q + + Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLAPVIQPLTAANLLMKINDD 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ + ++ + Y L + +P L+ L L Sbjct: 66 GLSYIEDYQDVVAYHRINEDLFIMAYASYVAALADASLQDNQPDPALFAFLQKTLELMNN 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ C T S K G +C + Sbjct: 126 GLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPDHYHQDERRC 185 Query: 184 LVLP--SFLWKEEQTIDADSL 202 + P FL + Q + L Sbjct: 186 HLNPNLPFLLDQFQAVRFSEL 206 >gi|307707933|ref|ZP_07644408.1| DNA repair protein RecO [Streptococcus mitis NCTC 12261] gi|307615998|gb|EFN95196.1| DNA repair protein RecO [Streptococcus mitis NCTC 12261] Length = 256 Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 70/202 (34%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q L R R Sbjct: 5 ITSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLAPVIQPLVLARFLLRIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + Y L + + L+ L L + Sbjct: 65 DGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L+ +C S K G +C + Sbjct: 125 AGLDYQVLTNIFEIQILTRFGISLNFNECAFCHRVGQAFDFSFKYGACLCPEHYHEDERR 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q ID ++L Sbjct: 185 CHLNPNIPYLLNQFQAIDFETL 206 >gi|15899982|ref|NP_344586.1| DNA repair protein RecO [Streptococcus pneumoniae TIGR4] gi|111656988|ref|ZP_01407795.1| hypothetical protein SpneT_02001779 [Streptococcus pneumoniae TIGR4] gi|149004191|ref|ZP_01828988.1| DNA repair protein RecO [Streptococcus pneumoniae SP14-BS69] gi|149006801|ref|ZP_01830487.1| DNA repair protein RecO [Streptococcus pneumoniae SP18-BS74] gi|149010901|ref|ZP_01832206.1| DNA repair protein RecO [Streptococcus pneumoniae SP19-BS75] gi|149026553|ref|ZP_01836607.1| DNA repair protein RecO [Streptococcus pneumoniae SP23-BS72] gi|168486713|ref|ZP_02711221.1| DNA repair protein RecO [Streptococcus pneumoniae CDC1087-00] gi|168492324|ref|ZP_02716467.1| DNA repair protein RecO [Streptococcus pneumoniae CDC0288-04] gi|169832502|ref|YP_001693558.1| DNA repair protein RecO [Streptococcus pneumoniae Hungary19A-6] gi|182683007|ref|YP_001834755.1| DNA repair protein RecO [Streptococcus pneumoniae CGSP14] gi|221230986|ref|YP_002510138.1| DNA repair protein RecO [Streptococcus pneumoniae ATCC 700669] gi|225853664|ref|YP_002735176.1| DNA repair protein RecO [Streptococcus pneumoniae JJA] gi|225855824|ref|YP_002737335.1| DNA repair protein RecO [Streptococcus pneumoniae P1031] gi|225857898|ref|YP_002739408.1| DNA repair protein RecO [Streptococcus pneumoniae 70585] gi|237649912|ref|ZP_04524164.1| DNA repair protein RecO [Streptococcus pneumoniae CCRI 1974] gi|237822595|ref|ZP_04598440.1| DNA repair protein RecO [Streptococcus pneumoniae CCRI 1974M2] gi|303260673|ref|ZP_07346636.1| DNA repair protein RecO [Streptococcus pneumoniae SP-BS293] gi|303260837|ref|ZP_07346786.1| DNA repair protein RecO [Streptococcus pneumoniae SP14-BS292] gi|303263164|ref|ZP_07349087.1| DNA repair protein RecO [Streptococcus pneumoniae BS397] gi|303267607|ref|ZP_07353448.1| DNA repair protein RecO [Streptococcus pneumoniae BS457] gi|303269477|ref|ZP_07355244.1| DNA repair protein RecO [Streptococcus pneumoniae BS458] gi|307126264|ref|YP_003878295.1| DNA repair protein RecO [Streptococcus pneumoniae 670-6B] gi|20139620|sp|Q97TA7|RECO_STRPN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238688354|sp|B1I7I6|RECO_STRPI RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238691174|sp|B2IR26|RECO_STRPS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|14971500|gb|AAK74226.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4] gi|147757853|gb|EDK64864.1| DNA repair protein RecO [Streptococcus pneumoniae SP14-BS69] gi|147761716|gb|EDK68680.1| DNA repair protein RecO [Streptococcus pneumoniae SP18-BS74] gi|147764537|gb|EDK71467.1| DNA repair protein RecO [Streptococcus pneumoniae SP19-BS75] gi|147929224|gb|EDK80228.1| DNA repair protein RecO [Streptococcus pneumoniae SP23-BS72] gi|168995004|gb|ACA35616.1| DNA repair protein RecO [Streptococcus pneumoniae Hungary19A-6] gi|182628341|gb|ACB89289.1| DNA repair protein RecO [Streptococcus pneumoniae CGSP14] gi|183570327|gb|EDT90855.1| DNA repair protein RecO [Streptococcus pneumoniae CDC1087-00] gi|183573466|gb|EDT93994.1| DNA repair protein RecO [Streptococcus pneumoniae CDC0288-04] gi|220673446|emb|CAR67913.1| DNA repair protein RecO [Streptococcus pneumoniae ATCC 700669] gi|225721562|gb|ACO17416.1| DNA repair protein RecO [Streptococcus pneumoniae 70585] gi|225724122|gb|ACO19975.1| DNA repair protein RecO [Streptococcus pneumoniae JJA] gi|225724427|gb|ACO20279.1| DNA repair protein RecO [Streptococcus pneumoniae P1031] gi|301793351|emb|CBW35714.1| DNA repair protein RecO [Streptococcus pneumoniae INV104] gi|301801005|emb|CBW33670.1| DNA repair protein RecO [Streptococcus pneumoniae INV200] gi|302637674|gb|EFL68160.1| DNA repair protein RecO [Streptococcus pneumoniae SP14-BS292] gi|302638203|gb|EFL68675.1| DNA repair protein RecO [Streptococcus pneumoniae SP-BS293] gi|302641011|gb|EFL71391.1| DNA repair protein RecO [Streptococcus pneumoniae BS458] gi|302642857|gb|EFL73163.1| DNA repair protein RecO [Streptococcus pneumoniae BS457] gi|302646937|gb|EFL77161.1| DNA repair protein RecO [Streptococcus pneumoniae BS397] gi|306483326|gb|ADM90195.1| DNA repair protein RecO [Streptococcus pneumoniae 670-6B] gi|332076495|gb|EGI86957.1| DNA repair protein RecO [Streptococcus pneumoniae GA17545] gi|332204062|gb|EGJ18127.1| DNA repair protein RecO [Streptococcus pneumoniae GA47901] Length = 256 Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 71/202 (35%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q L R R Sbjct: 5 ITSQGLVLYNRNFREDDKLVKIFTEQVGKRMFFVKHAGQSKLAPVIQPLVLARFLLRIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + Y L + + L+ L L + Sbjct: 65 DGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L+ +CV S K G +C + Sbjct: 125 AGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDKRR 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q ID ++L Sbjct: 185 CHLNPNIPYLLNQFQAIDFETL 206 >gi|319941432|ref|ZP_08015760.1| hypothetical protein HMPREF9464_00979 [Sutterella wadsworthensis 3_1_45B] gi|319805052|gb|EFW01882.1| hypothetical protein HMPREF9464_00979 [Sutterella wadsworthensis 3_1_45B] Length = 366 Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 64/191 (33%), Gaps = 10/191 (5%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRLAQ 64 +L R + E +++++V+T +GR R + ++ +L + + + W + + Sbjct: 125 GFVLHARPWSESSMVVDVLTAHFGRVFLVARGAKRPGSNLRGLLTPFSPLALTWTGK-KE 183 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + E L + A L G + R + L+ L+ Sbjct: 184 AKVLTQAEWLGALAALR--DEALLSGFYVNELVLRLTEREDVHPGLFQSYVHVLSALADE 241 Query: 125 SV--IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 E LL + G+GL L + + W GA+ G P Sbjct: 242 DPAVRQTGLRSFEAELLAHCGWGLALED---RDLQKGAEWFLLTPEGALKGVEGTPEDAA 298 Query: 183 MLVLPSFLWKE 193 L S LW + Sbjct: 299 NLPFASMLWPK 309 >gi|332205069|gb|EGJ19132.1| DNA repair protein RecO [Streptococcus pneumoniae GA47368] Length = 256 Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 71/202 (35%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q L R R Sbjct: 5 ITSQGLVLYNRNFREDDKLIKIFTEQVGKRMFFVKHAAQSKLAPVIQPLVLARFLLRIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + Y L + + L+ L L + Sbjct: 65 DGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L+ +CV S K G +C + Sbjct: 125 AGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDKRR 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q ID ++L Sbjct: 185 CHLNPNIPYLLNQFQAIDFETL 206 >gi|160933321|ref|ZP_02080709.1| hypothetical protein CLOLEP_02166 [Clostridium leptum DSM 753] gi|156867198|gb|EDO60570.1| hypothetical protein CLOLEP_02166 [Clostridium leptum DSM 753] Length = 254 Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 69/212 (32%), Gaps = 3/212 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M D +I+ +S GE + ++ V+TR+ G FVR ++ + + L Sbjct: 1 MQINTDGLIIREQSIGESDRLVTVLTREQGILRAFVRGAKAMKSRSASSTQLLCYSRLSI 60 Query: 61 RLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + E +E + PE+ + ++ L Sbjct: 61 YEGREKYIIDEAEPIEVFFSLRTDFEKLSLAQYFCELALALAPEKMEAGDFLRLVLNALY 120 Query: 120 CH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVSPKSGGAVCRSVGL 177 K +I +E+ +L GF DL C G + D ++ K G C S Sbjct: 121 FLGKGKLPAAQIKAIVEMRMLSLAGFMPDLVCCAQCGAYEADQMYFMVKQGSLYCGSCYP 180 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLT 209 +A +++ + + F T Sbjct: 181 QFAPGGVLMNRGVTTALRHTIYADFNKVFSFT 212 >gi|332360251|gb|EGJ38065.1| recombination protein O [Streptococcus sanguinis SK1056] Length = 257 Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 2/201 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q + + Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLAPVIQPLTAANLLMKINDD 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ + ++ + Y L + +P L+ L L Sbjct: 66 GLSYIEDYQDVVTYHRINEDLFIMAYASYVAALADASLQDNQPDPALFAFLQKTLELMNN 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ C T S K G +C + Sbjct: 126 GLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPEHYHQDERRC 185 Query: 184 LVLP--SFLWKEEQTIDADSL 202 + P FL + Q + L Sbjct: 186 HLNPNLPFLLDQFQAVRFSEL 206 >gi|328954021|ref|YP_004371355.1| DNA repair protein recO [Desulfobacca acetoxidans DSM 11109] gi|328454345|gb|AEB10174.1| DNA repair protein recO [Desulfobacca acetoxidans DSM 11109] Length = 265 Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 63/189 (33%), Gaps = 4/189 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR 61 Q A+IL + YGE + ++ +T GR ++ + + + L+ +LV+ + ++ Sbjct: 5 QTLALILKTQDYGEADRLVVFLTPDEGRVTALAKHARKSKRRFANCLEPFSLVQAIYTAK 64 Query: 62 LAQNLGEFRFEVL-ESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L L E+ S + + EL+ L L Sbjct: 65 PNLELARLDRGELVEAFPELRRSLDTLAAAACLTETAMEIVGAIDNLAELFAALQSSLTH 124 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKC-VVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + LL G+G C V T L+W S GG VC S Sbjct: 125 LATGLPSWSLLCSYLIRLLALAGYGPSWQTCQVCRRNTDGLVWFSLNKGGIVCSSCLGQS 184 Query: 180 AEKMLVLPS 188 + L Sbjct: 185 QGERLYPLH 193 >gi|221632230|ref|YP_002521451.1| DNA repair protein RecO [Thermomicrobium roseum DSM 5159] gi|221155865|gb|ACM04992.1| DNA repair protein RecO [Thermomicrobium roseum DSM 5159] Length = 278 Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 57/157 (36%), Gaps = 3/157 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++ +AI+L R GE + IL + T + G+ + + + + L +V + Sbjct: 18 YRTEAIVLRRRDLGEADRILTLFTPKAGKLRVIAKGIRRPQSRLAGHLDLFVRTQVLL-A 76 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R + + +++E + R + +P LYD+L L Sbjct: 77 RGRELDIVTQAQLVEPFTGLRREPWRAGWAGYLADLTDRATVDEDPQPALYDLLLECLRL 136 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + + E+ LL +G+ +L C G Sbjct: 137 LAELPDPFAVVRRFEMRLLVLLGYQPELVVCPHCGKQ 173 >gi|163750602|ref|ZP_02157839.1| DNA repair protein RecO [Shewanella benthica KT99] gi|161329597|gb|EDQ00588.1| DNA repair protein RecO [Shewanella benthica KT99] Length = 230 Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 34/230 (14%), Positives = 68/230 (29%), Gaps = 13/230 (5%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWRSRLA 63 + +L R + + ++++ ++ +GR R ++ ILQ + R + Sbjct: 2 ERGYVLHTRPFKDSSVLVNMLIDGHGRVDCVARLGSGKTSIKSILQPFQPLIFQLSGRTS 61 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + A LS + G L R + L+ + L Sbjct: 62 LRNM---SSLEAGSPAIPLSGDVSFAGFYLNELLVRCIAVDHGAESLFFTYHKTLMSMA- 117 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 EL LLK +G L + + + ++G + Sbjct: 118 AGFCESQLRYFELSLLKELGLMPTLRTDLSQDPIEPDYYYRLLPDEGFVNALGPKTSH-- 175 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 L +E ++A L+ A +L + L + R F Sbjct: 176 YSGEMLLALDEHRLEASHLRQAK-----YLMRLMLAPCLGDKPLKSRALF 220 >gi|324995748|gb|EGC27659.1| recombination protein O [Streptococcus sanguinis SK678] gi|327460128|gb|EGF06467.1| recombination protein O [Streptococcus sanguinis SK1] Length = 257 Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 67/201 (33%), Gaps = 2/201 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q + + Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHASKSKLAPVIQPLTAANLLMKINDD 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ + ++ + Y L + + L+ L L Sbjct: 66 GLSYIEDYQNVVTYHRINEDLFIMAYASYVAALADASLQDNQSDPALFAFLQKTLELMNN 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ C T S K G +C + Sbjct: 126 GLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPDHYHQDERRC 185 Query: 184 LVLP--SFLWKEEQTIDADSL 202 + P FL + Q + L Sbjct: 186 HLNPNLPFLLDQFQAVRFSEL 206 >gi|330957805|gb|EGH58065.1| DNA repair protein RecO [Pseudomonas syringae pv. maculicola str. ES4326] Length = 227 Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 38/228 (16%), Positives = 76/228 (33%), Gaps = 12/228 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R+Y E + +++ +T G +R+ + + + + + V +R R Sbjct: 8 PAYVLHSRAYRENSALVDFLTP-RGLFRAVLRSAKG-KAGSLARPFVPLEVEFRGRGELK 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + A ++ G+ L R LP +P ++D L Sbjct: 66 N---VGRMESAGVATWMTGEALFSGMYLNELLIRLLPAEDPHPAVFDHYAATLLALASGR 122 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + + E LL ++G+G + + + A V L Sbjct: 123 PLEPLLRSFEWRLLDDLGYGFAMDTDINGEPLAADGMYRLQ-VDAGLERVYLLQPGLFQG 181 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHL-LRENF 232 + E +L +A + L + AL ++ L RE F Sbjct: 182 VELLAMAEADWSTPGALSAAKR-----LMRQALAVHLGGRPLVSRELF 224 >gi|157960867|ref|YP_001500901.1| DNA repair protein RecO [Shewanella pealeana ATCC 700345] gi|157845867|gb|ABV86366.1| DNA repair protein RecO [Shewanella pealeana ATCC 700345] Length = 229 Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 68/236 (28%), Gaps = 12/236 (5%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWRSRLA 63 + +L R + + ++I+ ++ GR R G + ++ I+Q + + Sbjct: 2 ERGYVLHSRHFRDGSVIVNLLVDGKGRVDAVARLGGAKNSIRSIIQPFQPIIFQLHGKTD 61 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 +V + A L+ GL L R L + L+ + L Sbjct: 62 LKN---LKQVEAASPAVPLTGDCLYSGLYLNELLIRCLSVQHSAENLFFDYHRTLIAMAT 118 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA-EK 182 ++ E LL +G L + + + + K Sbjct: 119 EFNQSQLR-YFEHALLLELGTMPSLDFDPSDAPITASGFYRLEQDHGFTPVIATAFNQHK 177 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGKLL 237 + ++T+ + A + L + L + R F K Sbjct: 178 FFTGEMLVALNQRTLTTEHFLEAKK-----LMRQLLAPVLGDKPLHSRTLFAKKPK 228 >gi|325695245|gb|EGD37145.1| recombination protein O [Streptococcus sanguinis SK150] Length = 257 Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 2/201 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q + + Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLAPVIQPLTAANLLMKINDD 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ + ++ + Y L + +P L+ L L Sbjct: 66 GLSYIEDYQDVVTYHRINEDLFIMAYASYVAALADASLQDNQPDPALFAFLQKTLELMNN 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ C T S K G +C + Sbjct: 126 GLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPEHYHQDERRC 185 Query: 184 LVLP--SFLWKEEQTIDADSL 202 + P FL + Q + L Sbjct: 186 HLNPNLPFLLDQFQAVRFSEL 206 >gi|187934258|ref|YP_001885108.1| DNA repair protein RecO [Clostridium botulinum B str. Eklund 17B] gi|187722411|gb|ACD23632.1| DNA repair protein RecO [Clostridium botulinum B str. Eklund 17B] Length = 249 Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 78/249 (31%), Gaps = 19/249 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SR 61 ++ A+I+ + + E + ++ + T + G+ + + + + L + + Sbjct: 7 FESKAVIIKSQDFKENDKLVWLYTEELGKIAAIAKGAKKSKNKTFSITLPLCYGEYMLYK 66 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 +++ S L + Y + P+ E +++ L Sbjct: 67 GKNLYTIQEGKIINSFQGLLENLDKLTYSSYLCELIDICTPDDEKNKQIFIDLVTTFYLL 126 Query: 122 KIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV-SPKSGGAVCRSVGLPY 179 + + EL LLKN G+ L+L C + S + G VC Y Sbjct: 127 DTNALEYELLVRAFELKLLKNTGYSLELDSCCMCKKKIPSSNYISLSNYGGVCDECPKEY 186 Query: 180 ----AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYF---LNK---YALQHNIIHCHLLR 229 ++ FL K + LTD L K Y + +N Sbjct: 187 GLYISKATYNALKFLLKMKIDKVYR-----LNLTDKIKEELEKITSYLICNNYSKKPKS- 240 Query: 230 ENFLGKLLE 238 L + E Sbjct: 241 LEMLKFIKE 249 >gi|297617860|ref|YP_003703019.1| DNA repair protein RecO [Syntrophothermus lipocalidus DSM 12680] gi|297145697|gb|ADI02454.1| DNA repair protein RecO [Syntrophothermus lipocalidus DSM 12680] Length = 250 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 60/153 (39%), Gaps = 3/153 (1%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRL 62 +AI+L + + E + I+ R+ G+ + + + +Q ++ SR Sbjct: 7 TEAIVLKNQDFIETDKIVTFFARREGKLRAVAKGIKKPNSSLRGAVQPFCFSCLHL-SRG 65 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + ++E L+ L + L + L E +P E++D L C + Sbjct: 66 RELDLITQGRIIEFFGYVRDDMVKTLHSLYLMELLDKSLAEADPHPEVFDATLTVLRCLE 125 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 EL L + +G+ L L KC++ G Sbjct: 126 DGPFSPLAVRWFELKLARELGYALGLQKCILCG 158 >gi|327468022|gb|EGF13512.1| recombination protein O [Streptococcus sanguinis SK330] Length = 257 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 67/201 (33%), Gaps = 2/201 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q + + Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHASKSKLAPVIQPLTAANLLMKINDD 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ + ++ + Y L + + L+ L L Sbjct: 66 GLSYIKDYQNVVTYHRINEDLFIMAYASYVAALADASLQDNQSDPALFAFLQKTLELMNN 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ C T S K G +C + Sbjct: 126 GLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPDHYHQDERRC 185 Query: 184 LVLP--SFLWKEEQTIDADSL 202 + P FL + Q + L Sbjct: 186 HLNPNLPFLLDQFQAVRFSEL 206 >gi|195977176|ref|YP_002122420.1| DNA repair protein RecO [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|238689840|sp|B4U5G6|RECO_STREM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|195973881|gb|ACG61407.1| DNA recombination and repair protein RecO [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 256 Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 78/206 (37%), Gaps = 3/206 (1%) Query: 1 MYWQ-DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M Q I+L ++Y E + ++++ T G+ + FV++ ++ P++Q + Sbjct: 1 MRIQRSLGIVLYNKNYREDDKLVKIFTEAAGKRMFFVKHIGRSKLAPVVQPLTAADFLLK 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + +E++ Y + +P+ EP +L+ L L+ Sbjct: 61 INDSSLSYIEDYNQVEAYRHINEDFFRLSYASYVLALADAAIPDNEPDPQLFAFLKKTLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + E+ +L G ++ CV T S K G +C Sbjct: 121 LIEEGLDYDILTNIFEIQILDRFGVRMNFHDCVFCHSTNLPFDFSHKYSGVLCPQHYHED 180 Query: 180 AEKMLVLPS--FLWKEEQTIDADSLK 203 + + P+ +L QTI+ D LK Sbjct: 181 EGRYGLDPNVIYLINRFQTINIDELK 206 >gi|315222411|ref|ZP_07864315.1| DNA repair protein RecO [Streptococcus anginosus F0211] gi|315188496|gb|EFU22207.1| DNA repair protein RecO [Streptococcus anginosus F0211] Length = 257 Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 26/204 (12%), Positives = 70/204 (34%), Gaps = 2/204 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ ++ P++Q + + Sbjct: 5 ITSKGLVLYNRNFRENDKLVKIFTEQAGKRMFFVKHARNSKLNPVVQPLVVADFLMKIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 ++ + + Y + + + + L+ L L + Sbjct: 65 DGLSYIDDYQEVTTFQHINHDLFTMAYATYVVALADASIQDNKIDSALFAFLQKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L+ +C S G +C + Sbjct: 125 QGLDYEVLTNIFEIQILSRFGISLNFHECCFCHRVGLPFDFSFTYNGVLCSEHYNKDERR 184 Query: 183 MLVLP--SFLWKEEQTIDADSLKS 204 + P +L + Q + L++ Sbjct: 185 SHLDPNIPYLLDQFQAVQFSELEN 208 >gi|125716910|ref|YP_001034043.1| DNA repair protein RecO [Streptococcus sanguinis SK36] gi|166221914|sp|A3CJY8|RECO_STRSV RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|125496827|gb|ABN43493.1| DNA repair protein recO, putative [Streptococcus sanguinis SK36] gi|328944823|gb|EGG38984.1| recombination protein O [Streptococcus sanguinis SK1087] Length = 257 Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 2/201 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q + + Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLAPVIQPLTAANLLMKINDD 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ + ++ + Y L + +P L+ L L Sbjct: 66 GLSYIEDYQDVVTYHRINEDLFIMAYASYVAALADASLQDNQPDPALFAFLQKTLELMNN 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ C T S K G +C + Sbjct: 126 GLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPDHYHQDERRC 185 Query: 184 LVLP--SFLWKEEQTIDADSL 202 + P FL + Q + L Sbjct: 186 HLNPNLPFLLDQFQAVRFSEL 206 >gi|293364584|ref|ZP_06611305.1| recombination protein O [Streptococcus oralis ATCC 35037] gi|307702836|ref|ZP_07639784.1| DNA repair protein RecO [Streptococcus oralis ATCC 35037] gi|291316842|gb|EFE57274.1| recombination protein O [Streptococcus oralis ATCC 35037] gi|307623516|gb|EFO02505.1| DNA repair protein RecO [Streptococcus oralis ATCC 35037] Length = 256 Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 72/202 (35%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q L R R Sbjct: 5 ITSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLAPVIQPLVLARFLLRIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + Y L + + L+ L L + Sbjct: 65 DGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLRKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L+ +CV S K G +C ++ Sbjct: 125 AGIDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPDHYHEDEKR 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q ID ++L Sbjct: 185 CHLNPNIPYLLNQFQAIDFETL 206 >gi|309800334|ref|ZP_07694504.1| DNA repair protein RecO [Streptococcus infantis SK1302] gi|308116043|gb|EFO53549.1| DNA repair protein RecO [Streptococcus infantis SK1302] Length = 256 Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 72/202 (35%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q L R R Sbjct: 5 ITSQGLVLYNRNFREDDKLVKIFTEQVGKRMFFVKHAGQSKLAPVIQPLVLARFLLRIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + Y L + + L+ L L + Sbjct: 65 DGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L+ +CV S K G +C ++ Sbjct: 125 EGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDEKR 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q I+ ++L Sbjct: 185 CHLNPNIPYLLNQFQAINFETL 206 >gi|322436218|ref|YP_004218430.1| DNA repair protein RecO [Acidobacterium sp. MP5ACTX9] gi|321163945|gb|ADW69650.1| DNA repair protein RecO [Acidobacterium sp. MP5ACTX9] Length = 248 Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 62/152 (40%), Gaps = 3/152 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLA 63 +AI+L + E ++++ + TR++G+ G R+ R + L+ V+ W R Sbjct: 12 EAIVLRTWPFHEADLLVSLFTREFGKVKGIARHAMRSRRRFGGALEPMTHVKATWAERPK 71 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 Q L + S + L GL+ + + LP+ ++ + ++ Sbjct: 72 QELVRLDAFEIMSSPMTAKIDFVRLAGLELVAEVLDELPDGAVEDAVFRLALAVTGAMEV 131 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 V + + + +G+ +L +CVV G Sbjct: 132 GRVWMPVTYFCLW-MTRLMGWMPELGRCVVCG 162 >gi|332077345|gb|EGI87806.1| DNA repair protein RecO [Streptococcus pneumoniae GA41301] Length = 256 Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 71/202 (35%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q L R R Sbjct: 5 ITSQGLVLYNRNFREDDKLVKIFTEQVGKRMFFVKHAGQSKLAPVIQPLVLARFLLRIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + Y L + + L+ L L + Sbjct: 65 DGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDASLFAFLQKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L+ +CV S K G +C + Sbjct: 125 AGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDERR 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q ID ++L Sbjct: 185 CHLNPNIPYLLNQFQAIDFETL 206 >gi|194366745|ref|YP_002029355.1| DNA repair protein RecO [Stenotrophomonas maltophilia R551-3] gi|238693485|sp|B4SRK8|RECO_STRM5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|194349549|gb|ACF52672.1| DNA repair protein RecO [Stenotrophomonas maltophilia R551-3] Length = 239 Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 73/231 (31%), Gaps = 15/231 (6%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRN---GQSHRMQPILQAGNLVRV 56 M +DD +L R+Y E ++++EV++ Q+GR R + ++ LQ +R Sbjct: 1 MLIEDDTGFVLHARAYRETSLLVEVLSAQHGRIGVLARGVSTAKGQVLRAALQPLQWIRF 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R + A L L G R P ++P ELY Sbjct: 61 SALQRGELAQLRGAEALD---AAPRLVGQAMLAGFYLSELTLRLAPRQDPLPELYLAYGE 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSG---GAVCR 173 + + + + E LL ++G G +L + Sbjct: 118 ARARLGVGAGLAWTLRRFERELLTSLGLGFELDSASDGQPIDPAARYELDPQEGAQRLLS 177 Query: 174 SVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIH 224 ++ DA L ++ +L + L H++ Sbjct: 178 ERAGERRAAATGSALLALAADEEPDAADL-ASLRLP----MRRVLAHHLGP 223 >gi|322386409|ref|ZP_08060039.1| recombination protein O [Streptococcus cristatus ATCC 51100] gi|321269633|gb|EFX52563.1| recombination protein O [Streptococcus cristatus ATCC 51100] Length = 265 Score = 88.7 bits (218), Expect = 7e-16, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 73/201 (36%), Gaps = 2/201 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 ++IL R++ E + ++++ T Q G+ + FV++ ++ P++Q + + Sbjct: 6 TSKSLILYNRNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLAPVIQPLTAAELLMKINDD 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ +ES+ + Y + + +P L+ L L+ Sbjct: 66 GLSYIEDYQAVESYGQIKDDLFVMAYASYVAALADASIQDNQPDPALFAFLQKTLDLMNQ 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ CV T S + GG +C + Sbjct: 126 GLDYEVLTNIFEIQILSRFGVSLNFHDCVFCHRTGLPFDFSFQYGGVLCPDHYHKDDHRS 185 Query: 184 LVLP--SFLWKEEQTIDADSL 202 + P FL + Q + L Sbjct: 186 HLNPNIPFLLNQFQAVQFSEL 206 >gi|283779528|ref|YP_003370283.1| DNA repair protein RecO [Pirellula staleyi DSM 6068] gi|283437981|gb|ADB16423.1| DNA repair protein RecO [Pirellula staleyi DSM 6068] Length = 251 Score = 88.7 bits (218), Expect = 7e-16, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 58/156 (37%), Gaps = 3/156 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + AI+L V + E +++ + T +G+ + + + + + + R+ + + Sbjct: 5 KTTAIVLRVVDFSETSVVTTLFTEHFGKVSALAKGARRPKGPFENAIDLLAVARIVFIRK 64 Query: 62 LAQNLGEFRFEVLESHC-AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + L LE + S G L +P EL+ N L Sbjct: 65 SSDALDLLTEAKLERRFRSAERSLERLYAGFYLAELLTEMTDTGDPHPELFHASNRVLAE 124 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 S + + IEL L+++G LT+C + G Sbjct: 125 LDAGSPVAPLVAGIELFALRDLGHLPLLTECAICGN 160 >gi|297539122|ref|YP_003674891.1| DNA repair protein RecO [Methylotenera sp. 301] gi|297258469|gb|ADI30314.1| DNA repair protein RecO [Methylotenera sp. 301] Length = 245 Score = 88.7 bits (218), Expect = 7e-16, Method: Composition-based stats. Identities = 36/235 (15%), Positives = 75/235 (31%), Gaps = 15/235 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++++E+ +GR + + R + +LQ+ + W +L Sbjct: 16 YVLHTYPFKETSLVVELFAYGFGRVATTAKGARRPRSAMRGMLQSFQPLLATWSGKLELK 75 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + LL + G L R LP +P L++ + L Sbjct: 76 TLH---SLEWGSGLLLLKGEALMCGFYLNELLLRLLPREDPHESLFEYYSATLKILANGE 132 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM-- 183 + + EL LL+ +G+ + L V + + + G P Sbjct: 133 NLATTLRRFELKLLQELGYAIPLQHDVSNAQILEDFNYRYIAEHGATKLNGSPARVNNGI 192 Query: 184 --LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 L + + + + + Q L +Y L H + R+ + Sbjct: 193 QLLGKTLIDMASDDYNNIQTQQQSKQ-----LMRYLLAHYLGDKPLHTRQLLIDL 242 >gi|269127439|ref|YP_003300809.1| DNA repair protein RecO [Thermomonospora curvata DSM 43183] gi|268312397|gb|ACY98771.1| DNA repair protein RecO [Thermomonospora curvata DSM 43183] Length = 270 Score = 88.7 bits (218), Expect = 7e-16, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 69/181 (38%), Gaps = 6/181 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+ I+L + GE + I+ V+TR+ GR + + + L+ V + + Sbjct: 10 YRDEGIVLRTQKLGEADRIVTVLTRRSGRIRAAAKGVRRTRSKFGARLEPFTHVDLQFYE 69 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R + +L + + + G+ + + L E L L + Sbjct: 70 RRSLDLITQAETLRPYGEPLVTDYPRYTAGVAMLETAEK-LTAEEKEPALRQFLLLLGGL 128 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + ++ LL+++ G+ L +C G L + +GGA+C + Sbjct: 129 RTLVDRSHDPRLVLDAYLLRSLSVAGWAPALDECARCGSRGRLRVFAIAAGGALCGACRQ 188 Query: 178 P 178 P Sbjct: 189 P 189 >gi|168483659|ref|ZP_02708611.1| DNA repair protein RecO [Streptococcus pneumoniae CDC1873-00] gi|172043032|gb|EDT51078.1| DNA repair protein RecO [Streptococcus pneumoniae CDC1873-00] Length = 256 Score = 88.7 bits (218), Expect = 7e-16, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 71/202 (35%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q L R R Sbjct: 5 ITSQGLVLYNRNFREDDKLIKIFTEQVGKRMFFVKHAGQSKLAPVIQPLVLARFLLRIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + Y L + + L+ L L + Sbjct: 65 DGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L+ +CV S K G +C + Sbjct: 125 AGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDKRR 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q ID ++L Sbjct: 185 CHLNPNIPYLLNQFQAIDFETL 206 >gi|103486573|ref|YP_616134.1| recombinational DNA repair protein (RecF pathway)-like protein [Sphingopyxis alaskensis RB2256] gi|98976650|gb|ABF52801.1| Recombinational DNA repair protein (RecF pathway)-like protein [Sphingopyxis alaskensis RB2256] Length = 192 Score = 88.3 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 50/231 (21%), Positives = 81/231 (35%), Gaps = 44/231 (19%) Query: 13 RSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFE 72 R++GE IL +T + G G+VR G+S R++PIL GN V + RSR + LG E Sbjct: 2 RAHGEHGAILRALTHEAGLVAGYVRGGRSRRLRPILMPGNRVALELRSRTEEQLGGATVE 61 Query: 73 VLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS---VIGK 129 +LES L LPE +P LY L+ L + Sbjct: 62 LLESRAPLLGEPLAAAAIDWVTSLTVAVLPEGQPFPALYIALSAVLEAIGVAPSARQWAL 121 Query: 130 IFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSF 189 + EL+LL +GFGL+ Sbjct: 122 ALGRYELLLLAELGFGLEDKPRAA------------------------------------ 145 Query: 190 LWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLELI 240 + + +T +F+++ L +R+ + +L ++ Sbjct: 146 -----SSPSMAEMLDFLSVTGHFIDRDLLDGRNRALAGVRQRLIDRLGRVV 191 >gi|327463376|gb|EGF09695.1| recombination protein O [Streptococcus sanguinis SK1057] Length = 257 Score = 88.3 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 2/201 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q + + Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLAPVIQPLTAANLLMKINDD 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ + ++ + Y L + +P L+ L L Sbjct: 66 GLSYIEDYQDVVTYHRINEDLFIMAYASYVAALADASLQDNQPDPALFAFLQKTLELMNN 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ C T S K G +C + Sbjct: 126 GLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPDHYHQDERRC 185 Query: 184 LVLP--SFLWKEEQTIDADSL 202 + P FL + Q + L Sbjct: 186 HLNPNLPFLLDQFQAVRFSEL 206 >gi|328957482|ref|YP_004374868.1| DNA repair protein RecO [Carnobacterium sp. 17-4] gi|328673806|gb|AEB29852.1| DNA repair protein RecO [Carnobacterium sp. 17-4] Length = 269 Score = 88.3 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 64/172 (37%), Gaps = 2/172 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 + I+L VR++ E + ++++ T ++G+ + FV+ + + + + R Sbjct: 8 EGIVLSVRNHRENDQLVKLFTNRFGKRMFFVKGTRKQKNKLRTAVLPFTKATYIADIRDT 67 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + ++ + + L Y + L + L+ ++ L Sbjct: 68 GLCFIRDAKEVDQYKSMQTDIFLNAYATYILNLADAALDDGIVDSTLFHKIDRCLTEIDE 127 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + E+ +L G +L C V G T+ S GG +C++ Sbjct: 128 ETDPEIVVNIFEIQILPYFGVSPELRGCRVCGNTEGPFDYSGSYGGLLCQNH 179 >gi|324992721|gb|EGC24642.1| recombination protein O [Streptococcus sanguinis SK405] Length = 257 Score = 88.3 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 2/201 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q + + Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLAPVIQPLTAANLLMKINDD 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ + ++ + Y L + +P L+ L L Sbjct: 66 GLSYIEDYQDVVTYHRINEDLFIMAYASYVAALADASLQDNQPDPALFAFLQKTLEMMNN 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ C T S K G +C + Sbjct: 126 GLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPEHYHQDERRC 185 Query: 184 LVLP--SFLWKEEQTIDADSL 202 + P FL + Q + L Sbjct: 186 HLNPNLPFLLDQFQAVRFSEL 206 >gi|297242778|ref|ZP_06926716.1| DNA repair protein RecO [Gardnerella vaginalis AMD] gi|296888989|gb|EFH27723.1| DNA repair protein RecO [Gardnerella vaginalis AMD] Length = 248 Score = 88.3 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 71/191 (37%), Gaps = 14/191 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D+A++L GE + I+ ++T+++G+ + + + + L+ V + + Sbjct: 4 YRDEAVVLRTFPLGEADRIVVLLTKRHGKVRAVAKGVRRLKSRFGGRLEPLMRVDLLL-A 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL-- 118 + + + ++ ++ + ++ + L E E L Sbjct: 63 QGKSLDVVSQAVSIAAYAGEICADYTSYEYANVMLEVVDLLVSNEYTDEYRREYQDTLGQ 122 Query: 119 ---------NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 + K I + L L G+ L CVV G +DL + SP GG Sbjct: 123 YRLLTAALLSLSKHKHSPDAIGMSYILRALSLAGWSPRLQACVVCGKNEDLCYFSPCIGG 182 Query: 170 AVCRSVGLPYA 180 +C S P + Sbjct: 183 MMCASDHTPDS 193 >gi|306832521|ref|ZP_07465661.1| recombination protein O [Streptococcus bovis ATCC 700338] gi|304425279|gb|EFM28405.1| recombination protein O [Streptococcus bovis ATCC 700338] Length = 251 Score = 88.3 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 73/206 (35%), Gaps = 3/206 (1%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M ++ ++L R+Y E + ++++ T G+H+ FV++ R ++Q + + Sbjct: 1 MQTKETYGLVLYNRNYREDDKLVKIFTETNGKHMFFVKHAGKSRFNSVIQPLTAAKFILK 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 ++ +ES Y +P+ +L+ N L+ Sbjct: 61 INDTGLSFIEDYKEVESFKEINADLFRLSYASYVTALADAAVPDGVADPQLFTFFNKTLS 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + E+ LL+ G L+ +C S K G +C Sbjct: 121 LMEEGLDYEILTNIFEIQLLERFGVSLNFHECAFCHRIGLPFDFSHKYSGLLCPEHYGKD 180 Query: 180 AEKMLVLPS--FLWKEEQTIDADSLK 203 + + P+ +L Q I D LK Sbjct: 181 DYRSHLDPNVLYLVDRFQAIHFDELK 206 >gi|325697191|gb|EGD39077.1| recombination protein O [Streptococcus sanguinis SK160] Length = 257 Score = 88.3 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 28/187 (14%), Positives = 64/187 (34%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q + + Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAVKSKLAPVIQPLTAANLLMKINDD 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ + ++ + Y L + +P L+ L L Sbjct: 66 GLSYIEDYQDVVTYHRINEDLFIMAYASYVAALADASLQDNQPDPALFAFLQKTLELMND 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ C T S K G +C + Sbjct: 126 GLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPDHYHQDERRC 185 Query: 184 LVLPSFL 190 + P+ L Sbjct: 186 HLNPNLL 192 >gi|331265463|ref|YP_004325093.1| DNA repair protein RecO [Streptococcus oralis Uo5] gi|326682135|emb|CBY99751.1| DNA repair protein RecO [Streptococcus oralis Uo5] Length = 256 Score = 88.3 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 72/202 (35%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + F+++ ++ P++Q L R R Sbjct: 5 ITSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFIKHAGQSKLAPVIQPLVLARFLLRIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + Y L + + L+ L L + Sbjct: 65 DGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDSPLFAFLKKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L+ +CV S K G +C ++ Sbjct: 125 AGIDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPDHYHEDEKR 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q ID ++L Sbjct: 185 CHLNPNIPYLLNQFQAIDFETL 206 >gi|332363629|gb|EGJ41409.1| recombination protein O [Streptococcus sanguinis SK49] Length = 257 Score = 88.3 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 2/201 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q + + Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLAPVIQPLTAANLLMKINDD 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ + ++ + Y L + +P L+ L L Sbjct: 66 GLSYIEDYQDVVTYHRINEDLFIMAYASYVAALADASLQDNQPDPALFAFLQKTLELMNN 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ C T S K G +C + Sbjct: 126 GLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTSLPFDFSFKYSGVLCPDHYHQDERRC 185 Query: 184 LVLP--SFLWKEEQTIDADSL 202 + P FL + Q + L Sbjct: 186 HLNPNLPFLLDQFQAVRFSEL 206 >gi|315612133|ref|ZP_07887049.1| recombination protein O [Streptococcus sanguinis ATCC 49296] gi|315315796|gb|EFU63832.1| recombination protein O [Streptococcus sanguinis ATCC 49296] Length = 256 Score = 88.3 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 72/202 (35%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q L R R Sbjct: 5 ITSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLAPVIQPLVLARFLLRIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + Y L + + L+ L L + Sbjct: 65 DGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLRKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L+ +CV S K G +C ++ Sbjct: 125 AGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPDHFHEDEKR 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q ID ++L Sbjct: 185 CHLNPNIPYLLNQFQAIDFETL 206 >gi|325689108|gb|EGD31115.1| recombination protein O [Streptococcus sanguinis SK115] Length = 257 Score = 88.3 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 2/201 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q + + Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLAPVIQPLTAANLLMKINDD 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ + ++ + Y L + +P L+ L L Sbjct: 66 GLSYIEDYQDVVTYHRINEDLFIMAYASYVAALADASLQDNQPDPALFAFLQKTLELMNN 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ C T S K G +C + Sbjct: 126 GLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPDHYHQDERRC 185 Query: 184 LVLP--SFLWKEEQTIDADSL 202 + P FL + Q + L Sbjct: 186 HLNPNLPFLLDQFQAVRFSEL 206 >gi|257486566|ref|ZP_05640607.1| DNA repair protein RecO [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331010048|gb|EGH90104.1| DNA repair protein RecO [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 227 Score = 88.3 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 57/150 (38%), Gaps = 5/150 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R+Y E + +++ +T GR +R+ + + + + + V +R R Sbjct: 8 PAYVLHSRAYRENSALVDFLTP-QGRLRAVLRSAKG-KAGSLARPFVPLEVEFRGRGELK 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + A ++ G+ L R LP +P +++ L + Sbjct: 66 N---VGRMESAGVATWMTGEALFSGMYLNELLIRLLPAEDPHPAVFEHYAATLLALALGR 122 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + E LL ++G+G + + Sbjct: 123 PLEPLLRSFEWRLLDDLGYGFAMDGDINGE 152 >gi|332686713|ref|YP_004456487.1| DNA recombination and repair protein RecO [Melissococcus plutonius ATCC 35311] gi|332370722|dbj|BAK21678.1| DNA recombination and repair protein RecO [Melissococcus plutonius ATCC 35311] Length = 265 Score = 88.3 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 61/189 (32%), Gaps = 2/189 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS--R 61 IIL + + EK+ ++++ T +G+ + V++ I + + R Sbjct: 5 DTKGIILFTKQFKEKDKLVKIFTESHGKLMFLVKDAYRKNNPLIPAILPFTKAVYIGDFR 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + S + Y + + + +R LY N L Sbjct: 65 HDGLSFLNNSKEVTSFRNIQQDIFINAYATYILNLVDAAIEDRVYDPLLYQFTNQALTAL 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 + I E+ LL G + C V G T SPK G +C + + Sbjct: 125 EEGKDAEIITNIFEVQLLHRFGVIPEWHACAVCGNTNGKFDFSPKYSGILCEKHWILDSH 184 Query: 182 KMLVLPSFL 190 + P + Sbjct: 185 RYHSDPRCI 193 >gi|171778348|ref|ZP_02919527.1| hypothetical protein STRINF_00378 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282879|gb|EDT48303.1| hypothetical protein STRINF_00378 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 251 Score = 88.3 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 72/206 (34%), Gaps = 3/206 (1%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M ++ ++L R+Y E + ++++ T G+H+ FV++ R +Q + + + Sbjct: 1 MQNKETYGLVLYNRNYREDDKLVKIFTETNGKHMFFVKHASKSRFNSAIQPLTVAKFILK 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 ++ ++S Y +P+ +L+ L L Sbjct: 61 INETGLSFIEDYKEVDSFKEINADLFKLSYASYVTSLADAAVPDGVADPQLFAFLKKTLL 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + E+ +L+ G L+ +C S K G +C Sbjct: 121 LMEEGLDYEILTNIFEIQILERFGVSLNFHECAFCHRVGLPFDFSHKYSGLLCPEHYAKD 180 Query: 180 AEKMLVLPS--FLWKEEQTIDADSLK 203 + + P+ +L Q I D LK Sbjct: 181 EHRSHLDPNVLYLVDRFQAIQFDDLK 206 >gi|322376091|ref|ZP_08050601.1| DNA repair protein RecO [Streptococcus sp. C300] gi|321279041|gb|EFX56084.1| DNA repair protein RecO [Streptococcus sp. C300] Length = 256 Score = 88.3 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q L R Sbjct: 5 ITSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLAPVIQPLVLAIFLLRIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + Y L + + L+ L L + Sbjct: 65 DGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLRKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L+ +CV S K G +C ++ Sbjct: 125 AGIDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPDHFHEDEKR 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q ID ++L Sbjct: 185 CHLNPNIPYLLNQFQAIDFETL 206 >gi|312864401|ref|ZP_07724634.1| DNA repair protein RecO [Streptococcus downei F0415] gi|311100122|gb|EFQ58333.1| DNA repair protein RecO [Streptococcus downei F0415] Length = 251 Score = 88.3 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 71/202 (35%), Gaps = 2/202 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + ++L R+Y E + ++++ T G+ + FV++ ++ ++Q L + Sbjct: 5 ESRGLVLFNRNYREDDKLVKIFTETAGKRMFFVKHISRSKLASVIQPLTLADFLMKINED 64 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + +E+ L Y + + + + L+ L L + Sbjct: 65 GLSYLDDYREVETFKTINEDIFLLAYASYLVALADAAIEDGQHDALLFAFLVKTLELMEQ 124 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L+ G L+ CV S K G +C + + Sbjct: 125 GLDYEILTNIFEVQILERFGVRLNFHDCVFCHRVGLPFDFSYKYSGLLCPQHYEKDSYRS 184 Query: 184 LVLP--SFLWKEEQTIDADSLK 203 + P +L QTI + L+ Sbjct: 185 HLDPNVPYLLDRFQTISFEDLQ 206 >gi|325686323|gb|EGD28353.1| recombination protein O [Streptococcus sanguinis SK72] Length = 257 Score = 87.9 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 67/201 (33%), Gaps = 2/201 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q + + Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLAPVIQPLTAANLLMKINDD 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ + ++ + Y L + P L+ L L Sbjct: 66 GLSYIEDYQDVVTYNRINEDLFIMAYASYVAALADASLQDNHPDPVLFAFLQKTLELMNS 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ C T S K G +C + Sbjct: 126 GLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPEHYHQDERRC 185 Query: 184 LVLP--SFLWKEEQTIDADSL 202 + P FL + Q + L Sbjct: 186 HLNPNLPFLLDQFQAVRFSEL 206 >gi|288904245|ref|YP_003429466.1| DNA repair and homologous recombination RecO [Streptococcus gallolyticus UCN34] gi|306830272|ref|ZP_07463443.1| recombination protein O [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325977221|ref|YP_004286937.1| DNA repair protein recO [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288730970|emb|CBI12514.1| putative DNA repair and homologous recombination RecO [Streptococcus gallolyticus UCN34] gi|304427519|gb|EFM30620.1| recombination protein O [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325177149|emb|CBZ47193.1| DNA repair protein recO [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 251 Score = 87.9 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 75/206 (36%), Gaps = 3/206 (1%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M ++ ++L R+Y E + ++++ T G+H+ FV++ R ++Q + + + Sbjct: 1 MQTKETYGLVLYNRNYREDDKLVKIFTETNGKHMFFVKHAGKSRFNSVIQPLTVAKFILK 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 ++ ++S Y +P+ +L+ +N L+ Sbjct: 61 INDTGLSFIEDYKEVDSFKEINADLFKLSYASYVTALADAAVPDGVADPQLFAFVNKTLS 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + E+ LL+ G L+ +C S K G +C Sbjct: 121 LMEEGLDYEILTNIFEIQLLERFGVSLNFHECAFCHRVGLPFDFSHKYSGLLCPEHYGKD 180 Query: 180 AEKMLVLPS--FLWKEEQTIDADSLK 203 + + P+ +L Q I D LK Sbjct: 181 DYRSHLDPNVLYLVDRFQAIHFDELK 206 >gi|257068870|ref|YP_003155125.1| DNA replication and repair protein RecO [Brachybacterium faecium DSM 4810] gi|256559688|gb|ACU85535.1| DNA replication and repair protein RecO [Brachybacterium faecium DSM 4810] Length = 244 Score = 87.9 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 77/217 (35%), Gaps = 17/217 (7%) Query: 1 MY---WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVR 55 M ++DDAI+L GE + I+ ++TR++G+ + + R L+ LV Sbjct: 1 MQQKLYRDDAIVLRTHPLGEADRIITLLTRRHGKVRAVAKGVRRTGSRFGARLEPFTLVD 60 Query: 56 VNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 V + + + + +E+ + + +++ L + L Sbjct: 61 VQLHAGRSLHT-VTQVVTIEAFAVGISAEYGRFTAASAMLETTDRLTDEFVDPNQRGFLM 119 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + + + ++ LL+ + G+ +L C G + ++GG VC Sbjct: 120 LVGALRAMAEGRIPPPLVLDSFLLRTLAVSGWAPELRVCASCGADGPHHAIDIRAGGLVC 179 Query: 173 RSV----GLPYAEKMLVLPSFLWKEEQTIDADSLKSA 205 + + + FL D +++ A Sbjct: 180 TPCRRPGAIAVRQSTIEHMIFLLAG----DWENVLDA 212 >gi|283782940|ref|YP_003373694.1| DNA repair protein RecO [Gardnerella vaginalis 409-05] gi|298253428|ref|ZP_06977220.1| DNA repair protein RecO [Gardnerella vaginalis 5-1] gi|283442174|gb|ADB14640.1| DNA repair protein RecO [Gardnerella vaginalis 409-05] gi|297532823|gb|EFH71709.1| DNA repair protein RecO [Gardnerella vaginalis 5-1] Length = 248 Score = 87.9 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 72/191 (37%), Gaps = 14/191 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D+A++L GE + I+ ++T+++G+ + + + + L+ V + + Sbjct: 4 YRDEAVVLRTFPLGEADRIVVLLTKRHGKVRAVAKGVRRLKSRFGGRLEPLMRVDLLL-A 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL-- 118 + + + ++ ++ + ++ + L E E L Sbjct: 63 QGKSLDVVSQAVSIAAYAGEICADYTSYEYANVMLEVVDLLVSNEYTDEYRREYQDTLGQ 122 Query: 119 ---------NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 + K I V L L G+ L CVV G +DL + SP +GG Sbjct: 123 YRLLTAALLSLSKHKHSPDAIGVSYILRALSLAGWSPRLQACVVCGKNEDLCYFSPCAGG 182 Query: 170 AVCRSVGLPYA 180 +C S P + Sbjct: 183 MMCASDHTPDS 193 >gi|327330803|gb|EGE72549.1| DNA repair protein RecO [Propionibacterium acnes HL097PA1] Length = 246 Score = 87.9 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 61/184 (33%), Gaps = 8/184 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D A++L GE + I+ +++R++G+ R + S + L NLV + Sbjct: 4 YRDQAVVLRTHKLGEADRIVSMLSREHGKIRAVARGIRRTSSKFGARLDPFNLVDLQLVQ 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC-LELYDMLNIFLN 119 ++ + SLF + +P Y +L L Sbjct: 64 GRNLDVVAQVECLHPYSAPLRQDYSLFTAAEVMVEAADHLVPVDREPAPAQYRLLAGALR 123 Query: 120 CH-----KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 P + L L G+ DL CV G SP GG VC + Sbjct: 124 VLGQGTTDGPRPPEMVLDSYLLRSLSASGYAPDLVDCVRCGTPGPHQGFSPSLGGVVCIN 183 Query: 175 VGLP 178 P Sbjct: 184 CQPP 187 >gi|314925459|gb|EFS89290.1| DNA repair protein RecO [Propionibacterium acnes HL036PA3] Length = 237 Score = 87.9 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 61/184 (33%), Gaps = 8/184 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D A++L GE + I+ +++R++G+ R + S + L NLV + Sbjct: 4 YRDQAVVLRTHKLGEADRIVSMLSREHGKIRAVARGIRRTSSKFGARLDPFNLVDLQLVQ 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC-LELYDMLNIFLN 119 ++ + SLF + +P Y +L L Sbjct: 64 GRNLDVVAQVECLHPYSAPLRQDYSLFTAAEVMVEAADHLVPVDREPAPAQYRLLAGALR 123 Query: 120 CH-----KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 P + L L G+ DL CV G SP GG VC + Sbjct: 124 VLGQGTTDGPRPPEMVLDSYLLRSLSASGYAPDLVDCVRCGTPGPHQGFSPSLGGVVCIN 183 Query: 175 VGLP 178 P Sbjct: 184 CQPP 187 >gi|314918332|gb|EFS82163.1| DNA repair protein RecO [Propionibacterium acnes HL050PA1] Length = 290 Score = 87.9 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 61/184 (33%), Gaps = 8/184 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D A++L GE + I+ +++R++G+ R + S + L NLV + Sbjct: 48 YRDQAVVLRTHKLGEADRIVSMLSREHGKIRAVARGIRRTSSKFGARLDPFNLVDLQLVQ 107 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC-LELYDMLNIFLN 119 ++ + SLF + +P Y +L L Sbjct: 108 GRNLDVVAQVECLHPYSAPLRQDYSLFTAAEVMVEAADHLVPVDREPAPAQYRLLAGALR 167 Query: 120 CH-----KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 P + L L G+ DL CV G SP GG VC + Sbjct: 168 VLGQGTTDGPRPPEMVLDSYLLRSLSASGYAPDLVDCVRCGTPGPHQGFSPSLGGVVCIN 227 Query: 175 VGLP 178 P Sbjct: 228 CQPP 231 >gi|50842428|ref|YP_055655.1| DNA repair protein RecO [Propionibacterium acnes KPA171202] gi|282854112|ref|ZP_06263449.1| DNA repair protein RecO [Propionibacterium acnes J139] gi|289425304|ref|ZP_06427081.1| DNA repair protein RecO [Propionibacterium acnes SK187] gi|289427297|ref|ZP_06429013.1| DNA repair protein RecO [Propionibacterium acnes J165] gi|295130504|ref|YP_003581167.1| DNA repair protein RecO [Propionibacterium acnes SK137] gi|61214916|sp|Q6A969|RECO_PROAC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|50840030|gb|AAT82697.1| DNA repair protein RecO [Propionibacterium acnes KPA171202] gi|282583565|gb|EFB88945.1| DNA repair protein RecO [Propionibacterium acnes J139] gi|289154282|gb|EFD02970.1| DNA repair protein RecO [Propionibacterium acnes SK187] gi|289159766|gb|EFD07954.1| DNA repair protein RecO [Propionibacterium acnes J165] gi|291376643|gb|ADE00498.1| DNA repair protein RecO [Propionibacterium acnes SK137] gi|313764549|gb|EFS35913.1| DNA repair protein RecO [Propionibacterium acnes HL013PA1] gi|313772412|gb|EFS38378.1| DNA repair protein RecO [Propionibacterium acnes HL074PA1] gi|313792238|gb|EFS40339.1| DNA repair protein RecO [Propionibacterium acnes HL110PA1] gi|313801813|gb|EFS43047.1| DNA repair protein RecO [Propionibacterium acnes HL110PA2] gi|313807422|gb|EFS45909.1| DNA repair protein RecO [Propionibacterium acnes HL087PA2] gi|313809930|gb|EFS47651.1| DNA repair protein RecO [Propionibacterium acnes HL083PA1] gi|313813032|gb|EFS50746.1| DNA repair protein RecO [Propionibacterium acnes HL025PA1] gi|313816091|gb|EFS53805.1| DNA repair protein RecO [Propionibacterium acnes HL059PA1] gi|313820231|gb|EFS57945.1| DNA repair protein RecO [Propionibacterium acnes HL036PA1] gi|313822960|gb|EFS60674.1| DNA repair protein RecO [Propionibacterium acnes HL036PA2] gi|313825112|gb|EFS62826.1| DNA repair protein RecO [Propionibacterium acnes HL063PA1] gi|313827681|gb|EFS65395.1| DNA repair protein RecO [Propionibacterium acnes HL063PA2] gi|313830261|gb|EFS67975.1| DNA repair protein RecO [Propionibacterium acnes HL007PA1] gi|313834062|gb|EFS71776.1| DNA repair protein RecO [Propionibacterium acnes HL056PA1] gi|313838639|gb|EFS76353.1| DNA repair protein RecO [Propionibacterium acnes HL086PA1] gi|314915545|gb|EFS79376.1| DNA repair protein RecO [Propionibacterium acnes HL005PA4] gi|314919987|gb|EFS83818.1| DNA repair protein RecO [Propionibacterium acnes HL050PA3] gi|314923086|gb|EFS86917.1| DNA repair protein RecO [Propionibacterium acnes HL001PA1] gi|314932000|gb|EFS95831.1| DNA repair protein RecO [Propionibacterium acnes HL067PA1] gi|314955869|gb|EFT00269.1| DNA repair protein RecO [Propionibacterium acnes HL027PA1] gi|314958350|gb|EFT02453.1| DNA repair protein RecO [Propionibacterium acnes HL002PA1] gi|314960095|gb|EFT04197.1| DNA repair protein RecO [Propionibacterium acnes HL002PA2] gi|314962896|gb|EFT06996.1| DNA repair protein RecO [Propionibacterium acnes HL082PA1] gi|314966855|gb|EFT10954.1| DNA repair protein RecO [Propionibacterium acnes HL082PA2] gi|314968026|gb|EFT12125.1| DNA repair protein RecO [Propionibacterium acnes HL037PA1] gi|314973267|gb|EFT17363.1| DNA repair protein RecO [Propionibacterium acnes HL053PA1] gi|314975942|gb|EFT20037.1| DNA repair protein RecO [Propionibacterium acnes HL045PA1] gi|314978301|gb|EFT22395.1| DNA repair protein RecO [Propionibacterium acnes HL072PA2] gi|314981197|gb|EFT25291.1| DNA repair protein RecO [Propionibacterium acnes HL110PA3] gi|314984039|gb|EFT28131.1| DNA repair protein RecO [Propionibacterium acnes HL005PA1] gi|314987802|gb|EFT31893.1| DNA repair protein RecO [Propionibacterium acnes HL005PA2] gi|314990024|gb|EFT34115.1| DNA repair protein RecO [Propionibacterium acnes HL005PA3] gi|315078111|gb|EFT50162.1| DNA repair protein RecO [Propionibacterium acnes HL053PA2] gi|315080741|gb|EFT52717.1| DNA repair protein RecO [Propionibacterium acnes HL078PA1] gi|315084411|gb|EFT56387.1| DNA repair protein RecO [Propionibacterium acnes HL027PA2] gi|315085751|gb|EFT57727.1| DNA repair protein RecO [Propionibacterium acnes HL002PA3] gi|315088831|gb|EFT60807.1| DNA repair protein RecO [Propionibacterium acnes HL072PA1] gi|315091769|gb|EFT63745.1| DNA repair protein RecO [Propionibacterium acnes HL110PA4] gi|315093224|gb|EFT65200.1| DNA repair protein RecO [Propionibacterium acnes HL060PA1] gi|315096180|gb|EFT68156.1| DNA repair protein RecO [Propionibacterium acnes HL038PA1] gi|315098441|gb|EFT70417.1| DNA repair protein RecO [Propionibacterium acnes HL059PA2] gi|315101201|gb|EFT73177.1| DNA repair protein RecO [Propionibacterium acnes HL046PA1] gi|315103272|gb|EFT75248.1| DNA repair protein RecO [Propionibacterium acnes HL050PA2] gi|315105478|gb|EFT77454.1| DNA repair protein RecO [Propionibacterium acnes HL030PA1] gi|315108423|gb|EFT80399.1| DNA repair protein RecO [Propionibacterium acnes HL030PA2] gi|327326096|gb|EGE67886.1| DNA repair protein RecO [Propionibacterium acnes HL096PA2] gi|327327681|gb|EGE69457.1| DNA repair protein RecO [Propionibacterium acnes HL103PA1] gi|327332033|gb|EGE73770.1| DNA repair protein RecO [Propionibacterium acnes HL096PA3] gi|327443236|gb|EGE89890.1| DNA repair protein RecO [Propionibacterium acnes HL013PA2] gi|327446021|gb|EGE92675.1| DNA repair protein RecO [Propionibacterium acnes HL043PA2] gi|327448000|gb|EGE94654.1| DNA repair protein RecO [Propionibacterium acnes HL043PA1] gi|327450876|gb|EGE97530.1| DNA repair protein RecO [Propionibacterium acnes HL087PA3] gi|327453047|gb|EGE99701.1| DNA repair protein RecO [Propionibacterium acnes HL092PA1] gi|327453776|gb|EGF00431.1| DNA repair protein RecO [Propionibacterium acnes HL083PA2] gi|328753563|gb|EGF67179.1| DNA repair protein RecO [Propionibacterium acnes HL020PA1] gi|328754295|gb|EGF67911.1| DNA repair protein RecO [Propionibacterium acnes HL087PA1] gi|328754452|gb|EGF68068.1| DNA repair protein RecO [Propionibacterium acnes HL025PA2] gi|328760402|gb|EGF73970.1| DNA repair protein RecO [Propionibacterium acnes HL099PA1] gi|332675340|gb|AEE72156.1| DNA repair protein RecO [Propionibacterium acnes 266] Length = 246 Score = 87.9 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 61/184 (33%), Gaps = 8/184 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D A++L GE + I+ +++R++G+ R + S + L NLV + Sbjct: 4 YRDQAVVLRTHKLGEADRIVSMLSREHGKIRAVARGIRRTSSKFGARLDPFNLVDLQLVQ 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC-LELYDMLNIFLN 119 ++ + SLF + +P Y +L L Sbjct: 64 GRNLDVVAQVECLHPYSAPLRQDYSLFTAAEVMVEAADHLVPVDREPAPAQYRLLAGALR 123 Query: 120 CH-----KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 P + L L G+ DL CV G SP GG VC + Sbjct: 124 VLGQGTTDGPRPPEMVLDSYLLRSLSASGYAPDLVDCVRCGTPGPHQGFSPSLGGVVCIN 183 Query: 175 VGLP 178 P Sbjct: 184 CQPP 187 >gi|91794115|ref|YP_563766.1| DNA repair protein RecO [Shewanella denitrificans OS217] gi|91716117|gb|ABE56043.1| DNA repair protein RecO [Shewanella denitrificans OS217] Length = 240 Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 77/239 (32%), Gaps = 15/239 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM-QPILQAGNLVRVNWRSRLA- 63 A +L R + E ++IL ++ GR R G R + I+Q + V + ++ Sbjct: 3 RAYVLHHRPFRESSVILNMLVDGIGRVDAITRLGSGKRSIKSIVQPFQPLLVQFNNQSEH 62 Query: 64 QNLGEFRFEVLESHCAKL-LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 ++ G + LE+ + L+ G L R L L+ + L Sbjct: 63 KSQGLRNIKQLEAAAPAMPLAGDSLYSGFYLNELLVRLLSVEHQGESLFVEYHRALVALA 122 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV-----CRSVGL 177 + EL LLK +G L V + S Sbjct: 123 GEFNAASLR-YFELALLKELGALPSLAVDVQGEPLLATSHYRFLADEGFLPVLQSSSGAF 181 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 +++ +L + E + A L A L +Y L + + L R+ F Sbjct: 182 THSKGVLEGGMLIALNEHKLTALQLNQAKG-----LMRYLLTPLLGNKPLLSRQLFANN 235 >gi|332365387|gb|EGJ43150.1| recombination protein O [Streptococcus sanguinis SK1059] Length = 257 Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 2/201 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q + + Sbjct: 6 TSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLAPVIQPLTAANLLMKINDD 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ + ++ + Y L + +P L+ L L Sbjct: 66 GLSYIEDYQDVVTYHRINEDLFIMAYASYVAALADASLQDNQPDPALFAFLQKTLEMMNN 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ C T S K G +C + Sbjct: 126 GLDYEVLTNIFEIQILSRFGVSLNFHDCAFCHRTGLPFDFSFKYSGVLCPDHYHQDERRC 185 Query: 184 LVLP--SFLWKEEQTIDADSL 202 + P FL + Q + L Sbjct: 186 HLNPNLPFLLDQFQAVRFSEL 206 >gi|327540470|gb|EGF27055.1| DNA repair protein recO [Rhodopirellula baltica WH47] Length = 276 Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 52/155 (33%), Gaps = 3/155 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 AI+L + E ++I+ ++T+ GR + + + + L ++ + + Sbjct: 5 STTAIVLRTVDFSETSLIVTLLTKDLGRISALAKGARRLKGPFEGSLDLLSVCAITLIDK 64 Query: 62 LAQNLGEFRFEVLESHC-AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L L S G L + + +P EL+DM + Sbjct: 65 PGDTLDLLTESKLRRRFRGAQRSLERLHAGYYIAEMLRLLVDDDDPHRELFDMTLSAMGM 124 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + K + + L+ +G +C V G Sbjct: 125 IDGEGHVAKTLLAFDAQCLRLLGHSPATQRCTVCG 159 >gi|296133899|ref|YP_003641146.1| DNA repair protein RecO [Thermincola sp. JR] gi|296032477|gb|ADG83245.1| DNA repair protein RecO [Thermincola potens JR] Length = 250 Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 52/156 (33%), Gaps = 1/156 (0%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M ++ DA++L VR + E + I+ + T G+ + + + + N+ Sbjct: 2 MRLYKTDALVLRVRDFSEADRIVTLYTYSRGKVQAIAKGSRKTKSRKRGAVQPFTYGNFL 61 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 ++L + + L + L + L E +L + Sbjct: 62 LYQGRSLDTITQCEPKESFSHLREDLVKLAYSTYLTELVDGFTAEGEPNEQVFLLLLTTF 121 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + G + EL LL +G+ L CV Sbjct: 122 YLLLKDNPGLLVRAFELKLLNILGYCPQLESCVHCH 157 >gi|291166724|gb|EFE28770.1| DNA repair protein RecO [Filifactor alocis ATCC 35896] Length = 253 Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 66/208 (31%), Gaps = 14/208 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 MY + I+L Y + + IL + +++ G+ + +N + + + + N+ Sbjct: 1 MYINTEGIVLKSVKYKDSDAILTLFSKKMGKVTVYAKNVRKMNHSSMAVSQSFAYGNFVL 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQS-IVPLFRFLPEREPCLELYDMLNIFLN 119 R + + + + L + + + L E + L L L Sbjct: 61 RTQGKMLQLSSFECKENFYFLTEDIDKTFLAYYFVELSEKLLVENQTNHRLLQALLESLY 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLW-------------VSPK 166 K + + E L+ G+ ++KC+ G+ +D K Sbjct: 121 ALKDIEKYELVKLYFECKALRFCGYQPQVSKCLKCGIIRDNSIPFYFQVEDGGVYCYHCK 180 Query: 167 SGGAVCRSVGLPYAEKMLVLPSFLWKEE 194 S Y L F+ +E Sbjct: 181 SETEGHNIFYTQYDNTTYQLLDFMMRES 208 >gi|225869508|ref|YP_002745455.1| DNA repair protein RecO [Streptococcus equi subsp. equi 4047] gi|225698912|emb|CAW91910.1| DNA repair protein RecO [Streptococcus equi subsp. equi 4047] Length = 256 Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 78/206 (37%), Gaps = 3/206 (1%) Query: 1 MYWQ-DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M Q I+L ++Y E + ++++ T G+ + FV++ ++ P++Q + Sbjct: 1 MRIQRSLGIVLYNKNYREDDKLVKIFTEAAGKRMFFVKHIGRSKLAPVVQPLTAADFLLK 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + +E++ Y + +P+ EP +L+ L L+ Sbjct: 61 INDSSLSYIEDYNQVEAYRHINEDFFRLSYASYVLALADAAIPDNEPDPQLFAFLKKTLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + E+ +L G ++ CV T S K G +C Sbjct: 121 LMEEGLDYDILTNIFEVQILDRFGVRMNFHDCVFCHRTNLPFDFSHKYSGVLCPQHYHED 180 Query: 180 AEKMLVLPS--FLWKEEQTIDADSLK 203 + + P+ +L QT++ D LK Sbjct: 181 ERRYGLDPNVIYLLNRFQTLNIDELK 206 >gi|289166952|ref|YP_003445219.1| hypothetical protein smi_0052 [Streptococcus mitis B6] gi|288906517|emb|CBJ21349.1| conserved hypothetical protein [Streptococcus mitis B6] Length = 256 Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 71/202 (35%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q L R R Sbjct: 5 ITSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHVGQSKLAPVIQPLVLARFLLRIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + Y L + + L+ L L + Sbjct: 65 DGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDASLFAFLQKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L+ +CV S K G +C + Sbjct: 125 AGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRIGQAFDFSFKYGACLCPEHYHEDERR 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q ID ++L Sbjct: 185 CHLNPNIPYLLNQFQAIDFETL 206 >gi|227510289|ref|ZP_03940338.1| recombination protein O [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227189941|gb|EEI70008.1| recombination protein O [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 256 Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 60/175 (34%), Gaps = 2/175 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLA 63 I+L ++Y E++++++ +TR++G+ + V + + M+ + + Sbjct: 13 HGILLYTKAYRERDLLIKFLTREFGKKMFLVHGAKRPKFRMRAAILPFTYGAYFGDLKDD 72 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ ++ + Y + + + + YD L I L+ Sbjct: 73 GLSYINNYKRIDHFQGITADITKNAYATYIMSLIDLAFQDSIAIPKWYDQLMIGLSLIDD 132 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 I E+ LL G D C + S GG +C++ Sbjct: 133 GFDEEIITNIFEIQLLSAFGVEPDWVDCAICHRRDLPFDYSEAYGGLLCQNHFDK 187 >gi|227513296|ref|ZP_03943345.1| recombination protein O [Lactobacillus buchneri ATCC 11577] gi|227083497|gb|EEI18809.1| recombination protein O [Lactobacillus buchneri ATCC 11577] Length = 256 Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 60/175 (34%), Gaps = 2/175 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLA 63 I+L ++Y E++++++ +TR++G+ + V + + M+ + + Sbjct: 13 HGILLYTKAYRERDLLIKFLTREFGKKMFLVHGAKRPKFRMRAAILPFTYGAYFGDLKDD 72 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ ++ + Y + + + + YD L I L+ Sbjct: 73 GLSYINNYKSIDHFQGITADITKNAYATYIMSLIDLAFQDSIAIPKWYDQLMIGLSLIDD 132 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 I E+ LL G D C + S GG +C++ Sbjct: 133 GFDEEIITNIFEIQLLSAFGVEPDWVDCAICHRRDLPFDYSEAYGGLLCQNHFDK 187 >gi|69247286|ref|ZP_00604287.1| Recombination protein O, RecO [Enterococcus faecium DO] gi|257879931|ref|ZP_05659584.1| recombination protein O [Enterococcus faecium 1,230,933] gi|258616602|ref|ZP_05714372.1| DNA repair protein RecO, putative [Enterococcus faecium DO] gi|261208623|ref|ZP_05923060.1| recombination protein O [Enterococcus faecium TC 6] gi|289566738|ref|ZP_06447152.1| DNA repair protein RecO [Enterococcus faecium D344SRF] gi|294616319|ref|ZP_06696112.1| DNA repair protein RecO [Enterococcus faecium E1636] gi|68194908|gb|EAN09378.1| Recombination protein O, RecO [Enterococcus faecium DO] gi|257814159|gb|EEV42917.1| recombination protein O [Enterococcus faecium 1,230,933] gi|260077125|gb|EEW64845.1| recombination protein O [Enterococcus faecium TC 6] gi|289161459|gb|EFD09345.1| DNA repair protein RecO [Enterococcus faecium D344SRF] gi|291590833|gb|EFF22549.1| DNA repair protein RecO [Enterococcus faecium E1636] Length = 270 Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 60/186 (32%), Gaps = 2/186 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +IL R+Y EK+ ++++ T G+ + +++ + P L Sbjct: 6 ESKGLILSSRNYKEKDKLVKIFTESSGKMMFYIKGIHRQNQPLAPALLPFTEAVYIGNFL 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + + L YG + + + + + L+ L Sbjct: 66 SEGLSFLSSVKDVHAFRNIQEDIFLSGYGTYLLNLVDAAIEDHQYDPHLFQFTQQALQRM 125 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I E+ +L+ G T CVV G T+ S K GG +C Sbjct: 126 DQGDDAEIITNIFEVQILQRFGIAPIWTHCVVCGETKGKFDYSSKYGGVICEKHWPMDEH 185 Query: 182 KMLVLP 187 + P Sbjct: 186 RYHAYP 191 >gi|124265845|ref|YP_001019849.1| DNA replication and repair protein RecO [Methylibium petroleiphilum PM1] gi|124258620|gb|ABM93614.1| DNA replication and repair protein RecO [Methylibium petroleiphilum PM1] Length = 274 Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 58/151 (38%), Gaps = 8/151 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSR-- 61 A +L + E ++IL++ TR++GR + + +++ +L ++V + R Sbjct: 28 PAYLLHRYDWSESSLILDLFTREHGRVAVAAKGAKRPYSQLRAVLLPFQRLQVAYGVRRP 87 Query: 62 --LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + +L + L G L + L ++P L+D L Sbjct: 88 REGDGGEVQPLKTAEWAGGPAMLGGAALLTGFYLNELLMKLLARQDPHPALFDAYAHTLP 147 Query: 120 CH--KIPSVIGKIFVQIELMLLKNIGFGLDL 148 + + EL+LL+ IG +L Sbjct: 148 ALGASDDARVAAALRGFELVLLREIGLLPEL 178 >gi|161870627|ref|YP_001599800.1| DNA repair protein (recombination protein o) [Neisseria meningitidis 053442] gi|161596180|gb|ABX73840.1| DNA repair protein (recombination protein o) [Neisseria meningitidis 053442] Length = 264 Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 65/211 (30%), Gaps = 11/211 (5%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L V +W Sbjct: 13 FLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASWYGSQELK 72 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 V GL + + +P ELYD L + + Sbjct: 73 TLHRAEWVGGWRQP---QGRALFSGLYVNELVLKLTAREDPMPELYDALAKVMEAVCREA 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV----CRSVGLPYAE 181 + E LL +G DL G AV + L + Sbjct: 130 NHIADLRRFEWKLLNALGVAPDLHADSTGGDILADKTYRLMPEEAVMPVCEDADALSHEA 189 Query: 182 KMLVLPSFLWK--EEQTIDADSLKSAFQLTD 210 +V L E A+SL+ A ++T Sbjct: 190 GAIVEGQSLIDLREGSFRTAESLQQALKITR 220 >gi|15838839|ref|NP_299527.1| DNA repair protein RecO [Xylella fastidiosa 9a5c] gi|17865569|sp|Q9PB96|RECO_XYLFA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|9107402|gb|AAF85047.1|AE004037_8 DNA repair protein RecO [Xylella fastidiosa 9a5c] Length = 243 Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 64/215 (29%), Gaps = 12/215 (5%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG---QSHRMQPILQAGNLVRV 56 M + + A +L VR + E ++++EV+T+ YGR R + ++ LQ +R Sbjct: 1 MLIEHEVAFVLHVRPWRETSLLVEVLTQAYGRLGLIARGVQGLKKQTLRAALQPLQWIRF 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R + A L L L R +P P ELY + Sbjct: 61 SAIQRGELGQLRQAEALD---TAPRLKGEAMLASFYINELLLRLVPRHAPVNELYLAYSQ 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSG----GAVC 172 + + E +L+ +G G +L + Sbjct: 118 TRERLRTSDSLAWSLRLFEREILETLGVGFNLECDANGTPLDPATRYVLDPLEGPRRLLS 177 Query: 173 RSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQ 207 + Q + + L + + Sbjct: 178 EHNNAKRRDTATGHVLLALARNQIPNTNDL-AGLR 211 >gi|269925917|ref|YP_003322540.1| DNA repair protein RecO [Thermobaculum terrenum ATCC BAA-798] gi|269789577|gb|ACZ41718.1| DNA repair protein RecO [Thermobaculum terrenum ATCC BAA-798] Length = 254 Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 75/197 (38%), Gaps = 8/197 (4%) Query: 1 MY---WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVR 55 M ++ AI+L +GE L T +G+ + + ++ L+ L + Sbjct: 1 MQERVYKTQAIVLRRFDFGETGRQLIAFTPDFGKISLIAKGTKKPTSKLAGHLEPLTLTQ 60 Query: 56 VNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + S + + ++S S + +GL L R + E EP E++ + Sbjct: 61 LVVAS-GRNIDTVTQAQTIKSFANVRSDSRVIPFGLIVAELLDRMIAEGEPNREIWALAV 119 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCR 173 L + K ++ LL G+ +L C G V + ++ S +GG VCR Sbjct: 120 DTLERLNNTNDPWKPVTYFQVRLLILAGYQPELKVCSRCGQDVAPESVYFSLSAGGMVCR 179 Query: 174 SVGLPYAEKMLVLPSFL 190 ++V P+ + Sbjct: 180 ECSKGDPTAVVVSPNVI 196 >gi|326333985|ref|ZP_08200215.1| DNA repair protein RecO [Nocardioidaceae bacterium Broad-1] gi|325948264|gb|EGD40374.1| DNA repair protein RecO [Nocardioidaceae bacterium Broad-1] Length = 242 Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 67/184 (36%), Gaps = 8/184 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++D+AI+L GE + I+ ++TR +GR + + R L+ V + + Sbjct: 4 YRDEAIVLRTHKLGEADRIITMLTRHHGRVRAVAKGVRRTTSRWGSRLEPFTHVDLQFAE 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC-LELYDMLNIFLN 119 + + H L + G + R + E + Y +L L Sbjct: 64 GRNLDTITQAETLTLFHAGIGLDYDRYTAGTAMLETADRLVHEEGEPAPQQYLLLVGGLR 123 Query: 120 CHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + ++ LL+++ G+ C G+ W + GGA+C + Sbjct: 124 VLAQGDRLP--RHVLDSYLLRSLAVAGYAPSFEACARCGLEGPHRWFNVSMGGALCTTCR 181 Query: 177 LPYA 180 +P + Sbjct: 182 VPGS 185 >gi|71733200|ref|YP_276082.1| DNA repair protein RecO [Pseudomonas syringae pv. phaseolicola 1448A] gi|289628146|ref|ZP_06461100.1| DNA repair protein RecO [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649888|ref|ZP_06481231.1| DNA repair protein RecO [Pseudomonas syringae pv. aesculi str. 2250] gi|298488679|ref|ZP_07006708.1| DNA recombination and repair protein RecO [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|92087030|sp|Q48EV5|RECO_PSE14 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|71553753|gb|AAZ32964.1| DNA repair protein RecO [Pseudomonas syringae pv. phaseolicola 1448A] gi|298156752|gb|EFH97843.1| DNA recombination and repair protein RecO [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320325570|gb|EFW81632.1| DNA repair protein RecO [Pseudomonas syringae pv. glycinea str. B076] gi|320327144|gb|EFW83158.1| DNA repair protein RecO [Pseudomonas syringae pv. glycinea str. race 4] gi|330871239|gb|EGH05948.1| DNA repair protein RecO [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330879242|gb|EGH13391.1| DNA repair protein RecO [Pseudomonas syringae pv. glycinea str. race 4] gi|330989030|gb|EGH87133.1| DNA repair protein RecO [Pseudomonas syringae pv. lachrymans str. M301315] Length = 227 Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 57/150 (38%), Gaps = 5/150 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R+Y E + +++ +T GR +R+ + + + + + V +R R Sbjct: 8 PAYVLHSRAYRENSALVDFLTP-QGRLRAVLRSAKG-KAGSLARPFVPLEVEFRGRGELK 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + A ++ G+ L R LP +P +++ L + Sbjct: 66 N---VGRMESAGVATWMTGEALFSGMYLNELLIRLLPAEDPHPAVFEHYAATLLALALGR 122 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + E LL ++G+G + + Sbjct: 123 PLEPLLRSFEWRLLDDLGYGFAMDADINGE 152 >gi|66047176|ref|YP_237017.1| DNA repair protein RecO [Pseudomonas syringae pv. syringae B728a] gi|75500899|sp|Q4ZPE3|RECO_PSEU2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|63257883|gb|AAY38979.1| Recombination protein O, RecO [Pseudomonas syringae pv. syringae B728a] gi|330973034|gb|EGH73100.1| DNA repair protein RecO [Pseudomonas syringae pv. aceris str. M302273PT] Length = 227 Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 57/150 (38%), Gaps = 5/150 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R+Y E + +++ +T GR +R+ + + + + + V +R R Sbjct: 8 PAYVLHSRAYRENSALVDFLTP-QGRLRAVLRSAKG-KAGSLARPFVPLEVEFRGRGELK 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + A ++ G+ L R LP +P +++ L + Sbjct: 66 N---VGRMESAGVATWMTGEALFSGMYLNELLIRLLPAEDPHPAVFEHYAATLLALALGR 122 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + E LL ++G+G + + Sbjct: 123 PLEPLLRSFEWRLLDDLGYGFAMDADINGE 152 >gi|28871357|ref|NP_793976.1| DNA repair protein RecO [Pseudomonas syringae pv. tomato str. DC3000] gi|213971117|ref|ZP_03399236.1| DNA repair protein RecO [Pseudomonas syringae pv. tomato T1] gi|301381866|ref|ZP_07230284.1| DNA repair protein RecO [Pseudomonas syringae pv. tomato Max13] gi|302063244|ref|ZP_07254785.1| DNA repair protein RecO [Pseudomonas syringae pv. tomato K40] gi|302132834|ref|ZP_07258824.1| DNA repair protein RecO [Pseudomonas syringae pv. tomato NCPPB 1108] gi|38258467|sp|Q87XG3|RECO_PSESM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|28854608|gb|AAO57671.1| DNA repair protein RecO [Pseudomonas syringae pv. tomato str. DC3000] gi|213924106|gb|EEB57682.1| DNA repair protein RecO [Pseudomonas syringae pv. tomato T1] gi|330877433|gb|EGH11582.1| DNA repair protein RecO [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330964518|gb|EGH64778.1| DNA repair protein RecO [Pseudomonas syringae pv. actinidiae str. M302091] gi|331015603|gb|EGH95659.1| DNA repair protein RecO [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 227 Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 57/150 (38%), Gaps = 5/150 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R+Y E + +++ +T GR +R+ + + + + + V +R R Sbjct: 8 PAYVLHSRAYRENSALVDFLTP-QGRLRAVLRSAKG-KAGSLARPFVPLEVEFRGRGELK 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + A ++ G+ L R LP +P +++ L + Sbjct: 66 N---VGRMESAGVATWMTGEALFSGMYLNELLIRLLPAEDPHPAVFEHYAATLLALALGR 122 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + E LL ++G+G + + Sbjct: 123 PLEPLLRSFEWRLLDDLGYGFAMDADINGE 152 >gi|325915830|ref|ZP_08178129.1| DNA replication and repair protein RecO [Xanthomonas vesicatoria ATCC 35937] gi|325537951|gb|EGD09648.1| DNA replication and repair protein RecO [Xanthomonas vesicatoria ATCC 35937] Length = 240 Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 55/167 (32%), Gaps = 7/167 (4%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM---QPILQAGNLVRV 56 M + + +L VR++ E ++++EV+T QYGR R Q R + LQ L++ Sbjct: 1 MLIEHEHGFVLHVRAWRETSVLVEVLTEQYGRVGLLARGVQGPRKQALRAALQPLQLIQF 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R + A L L G L R P + ELY Sbjct: 61 TAVQRGELAQLRQAEALD---TAPRLVGERMLAGFYISELLLRLAPRNDSVPELYACYAQ 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV 163 + + E +L+ +GF DL Sbjct: 118 ARAHLASDLSLAWSLRRFERDVLEGLGFAFDLQHDSDGQPIDPAARY 164 >gi|38234284|ref|NP_940051.1| DNA repair protein RecO [Corynebacterium diphtheriae NCTC 13129] gi|38200547|emb|CAE50242.1| Putative DNA-repair related protein [Corynebacterium diphtheriae] Length = 242 Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 59/175 (33%), Gaps = 4/175 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 +++ A+++ +GE + I+ + TR G G + + + + LQ + V Sbjct: 6 YRERALVVRSYDFGEADRIIVLFTRGRGIVRGVAKGVRRAKSRFGSRLQPFVELDVQL-Y 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R + + AK++ SI+ L + L+D+ L Sbjct: 65 RGRNLESITAADTVAYFGAKIIDDVTRFSAASSILEGVEKLAVGD-EPRLFDLTVTALKN 123 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + L + G+ L C G + P GGAVC Sbjct: 124 MQSCAHPVAEVDTFLLQGMNIAGWAPSLFDCAQCGASGPHHAFHPSPGGAVCVHC 178 >gi|116510881|ref|YP_808097.1| DNA repair protein RecO [Lactococcus lactis subsp. cremoris SK11] gi|122940431|sp|Q033E7|RECO_LACLS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|116106535|gb|ABJ71675.1| DNA replication and repair protein RecO [Lactococcus lactis subsp. cremoris SK11] Length = 251 Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 69/203 (33%), Gaps = 2/203 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + ++L R+Y EK+ ++++ T +G+ + FV+N LQA ++ Sbjct: 5 ETQGLVLYSRNYKEKDKLVKIFTESFGKRMFFVKNFGKSSYASSLQAFTDGKLTATINDG 64 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + + + I + + + LY L L Sbjct: 65 GFSFIEDVSEVVVYKNISADIFINAHASYIISLADAAISDNQYDPALYGFLKRSLELLDQ 124 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + + EL +L G L+ ++C T S K G +C + Sbjct: 125 GFDMEVVTNIFELQVLHRFGVSLNFSECAFCHKTVGPFDFSYKFSGCLCPRHFDEDLRRS 184 Query: 184 LVLPS--FLWKEEQTIDADSLKS 204 + P+ +L Q I D LK Sbjct: 185 HLDPNVIYLINLFQEISLDELKK 207 >gi|330889506|gb|EGH22167.1| DNA repair protein RecO [Pseudomonas syringae pv. mori str. 301020] Length = 227 Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 56/150 (37%), Gaps = 5/150 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R+Y E + +++ +T GR +R+ + + + + + V +R R Sbjct: 8 PAYVLHSRAYRENSALVDFLTP-QGRLRAVLRSAKG-KAGSLARPFVPLEVEFRGRGELK 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + A ++ G+ L R L +P +++ L + Sbjct: 66 N---VGRMESAGVATWMTGEALFSGMYLNELLIRLLSAEDPHPAVFEHYAATLLALALGR 122 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + E LL ++G+G + + Sbjct: 123 PLEPLLRSFEWRLLDDLGYGFAMDADINGE 152 >gi|331698248|ref|YP_004334487.1| DNA repair protein recO [Pseudonocardia dioxanivorans CB1190] gi|326952937|gb|AEA26634.1| DNA repair protein recO [Pseudonocardia dioxanivorans CB1190] Length = 246 Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 71/203 (34%), Gaps = 6/203 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D ++L V+ GE + I+ ++TR++G+ + + R + L+ N V V Sbjct: 4 YRDTGVVLRVQKLGEADRIVTLLTRRHGKLRAVAKGVRRTRSRWGARLEPFNHVDVQ-CY 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + E +++ A ++ +I+ L E L L + Sbjct: 63 TGRSLDVVTQAETVDAFGAGIVDDYGRYTAGCAILETADRLVSEEGEPALRVYLLLVGAI 122 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + ++ LL+ + G+ +T+C S GGAVC Sbjct: 123 RAMAGRERDPSLVLDAFLLRAMSHAGWAPAITECAKCAEPGPHRAFSVAGGGAVCPRCRP 182 Query: 178 PYAEKMLVLPSFLWKEEQTIDAD 200 P + L D D Sbjct: 183 PGSVLPSAETFTLLDALLHGDWD 205 >gi|86135138|ref|ZP_01053720.1| recombination protein O [Polaribacter sp. MED152] gi|85822001|gb|EAQ43148.1| recombination protein O [Polaribacter sp. MED152] Length = 240 Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 67/232 (28%), Gaps = 8/232 (3%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP----ILQAGNLVRVN 57 AI+L YG+ ++I++ T++ G +R + + Q +++ Sbjct: 3 IVTTKAIVLSAIKYGDTSLIVKCYTQEEGIKTYMIRGVLKPKKKGITAAYFQPLTQLKIV 62 Query: 58 WRSRLAQNLGEFRFEVLE-SHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 L + + + + L L + E E LY+ L Sbjct: 63 ANHNSKNTLNSLKEVQVHQPYKTVYSNIVKQSVVLFLSEVLSNAIQEEEQNTTLYEYLET 122 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + + + L L +GF DL+ G S Sbjct: 123 ALQWLDLHDNVANFHLLFLLNLTGFLGFYPDLSDHTKNGFDLLEGVYSDNFANKNVIHKN 182 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL 228 Y K L+ +F +E + + + Q+ + L Sbjct: 183 DFYQFKKLLGINFDEIQEVSFSKEERQVVLQIIIQYFK---LHLGNFRNPKS 231 >gi|189347865|ref|YP_001944394.1| DNA repair protein RecO [Chlorobium limicola DSM 245] gi|238692211|sp|B3EI06|RECO_CHLL2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|189342012|gb|ACD91415.1| DNA repair protein RecO [Chlorobium limicola DSM 245] Length = 261 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 63/159 (39%), Gaps = 4/159 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M + A++L Y +++ I + T ++G+ ++ G++ + + AGN++ + Sbjct: 1 MIVKTRAVVLREIKYRDQSKICTLFTSEFGKLTAILKGGRNPKSRLSGKFSAGNVLDIVL 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIF 117 + +++ L + I+ L + L E L L+ +L Sbjct: 61 YKKNGRDIQLISDGSLLFSPLSAEPDMERFATMYRIIDLISQALEGEEKNLPLFSLLTGV 120 Query: 118 LNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 L +F+ L ++ +GF L +CV +G Sbjct: 121 LEILYSTEERFELLFIWFLLRMISTLGFEPSLDRCVYSG 159 >gi|227524440|ref|ZP_03954489.1| recombination protein O [Lactobacillus hilgardii ATCC 8290] gi|227088399|gb|EEI23711.1| recombination protein O [Lactobacillus hilgardii ATCC 8290] Length = 256 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 60/175 (34%), Gaps = 2/175 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLA 63 I+L ++Y E++++++ +TR++G+ + V + + M+ + + Sbjct: 13 HGILLYTKAYRERDLLIKFLTREFGKKMFLVHGAKRPKFRMRAAILPFTYGAYFGDLKDD 72 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ ++ + Y + + + + YD L I L+ Sbjct: 73 GLSYINNYKSIDHFQGITADITKNAYATYIMSLIDLAFQDSIAIPKWYDQLMIGLSLIDD 132 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 I E+ LL G D C + S GG +C++ Sbjct: 133 GFDEEIITNIFEIQLLSAFGVEPDWVDCAICHRRDLPFDYSEAYGGLLCQNHFDK 187 >gi|225867639|ref|YP_002743587.1| DNA repair protein RecO [Streptococcus equi subsp. zooepidemicus] gi|225700915|emb|CAW97592.1| DNA repair protein RecO [Streptococcus equi subsp. zooepidemicus] Length = 256 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 78/206 (37%), Gaps = 3/206 (1%) Query: 1 MYWQ-DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M Q I+L ++Y E + ++++ T G+ + FV++ ++ P++Q + Sbjct: 1 MRIQRSLGIVLYNKNYREDDKLVKIFTEAAGKRMFFVKHIGRSKLAPVVQPLTAADFLLK 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + +E++ Y + +P+ EP L+ L L+ Sbjct: 61 INDSSLSYIEDYNQVEAYRHINEDFFRLSYASYVLALADAAIPDNEPDPHLFAFLKKTLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + +E+ +L G ++ CV T S K G +C Sbjct: 121 LMEEGLDYDILTNILEIQILDRFGVRMNFHDCVFCHRTNLPFDFSHKYSGVLCPQHYHED 180 Query: 180 AEKMLVLPS--FLWKEEQTIDADSLK 203 + + P+ +L QTI+ D L+ Sbjct: 181 EGRYGLDPNVIYLLNRFQTINIDELR 206 >gi|251780100|ref|ZP_04823020.1| DNA repair protein RecO [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084415|gb|EES50305.1| DNA repair protein RecO [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 249 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 75/249 (30%), Gaps = 19/249 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SR 61 ++ A+I+ + + E + ++ + T + G+ + + + + L + + Sbjct: 7 FESKAVIIKSQDFKENDKLVWLYTEELGKIAAIAKGAKKSKNKTFSITLPLCYGEYMLYK 66 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + S L + Y + P+ E +++ L Sbjct: 67 GKNLYTIQEGKSINSFQGLLENLDKLTYSSYLCELIDICTPDDEKNKQIFIDLVTTFYLL 126 Query: 122 KIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC-----RSV 175 + + EL LLKN G+ L+L C + S + Sbjct: 127 DTNALEYELLVRAFELKLLKNTGYSLELDNCCMCKKKIISSNYISLSNYGGVCGECPKEY 186 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYF---LNK---YALQHNIIHCHLLR 229 GL ++ FL K + LTD L K Y + +N Sbjct: 187 GLYISKATYNALKFLLKMKIDKVYR-----LNLTDKIKEELEKITSYLICNNYSKKPKS- 240 Query: 230 ENFLGKLLE 238 L + E Sbjct: 241 LEMLKFIKE 249 >gi|188587696|ref|YP_001920269.1| DNA repair protein RecO [Clostridium botulinum E3 str. Alaska E43] gi|188497977|gb|ACD51113.1| DNA repair protein RecO [Clostridium botulinum E3 str. Alaska E43] Length = 249 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 79/249 (31%), Gaps = 19/249 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SR 61 ++ A+I+ + + E + ++ + T + G+ + + + + L + + Sbjct: 7 FESKAVIIKSQDFKENDKLVWLYTEELGKIAAIAKGAKKSKNKTFSITLPLCYGEYMLYK 66 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + S L + Y + P+ E +++ L Sbjct: 67 GKNLYTIQEGKSINSFQGLLENLDKLTYSSYLCELIDICTPDDEKNKQIFIDLVTTFYLL 126 Query: 122 KIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVT-GVTQDLLWVSPKSGGAVCRSVGLPY 179 + + EL LLKN G+ L+L C + ++S + G VC Y Sbjct: 127 DTNALEYELLVRAFELKLLKNTGYSLELDNCCMCKKKIISSNYISLSNYGGVCDECPKEY 186 Query: 180 ----AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYF---LNK---YALQHNIIHCHLLR 229 ++ FL K + LTD L K Y + +N Sbjct: 187 GLYISKATYNALKFLLKMKIDKVYR-----LNLTDKIKEELEKITSYLICNNYSKKPKS- 240 Query: 230 ENFLGKLLE 238 L + E Sbjct: 241 LEMLKFIKE 249 >gi|148995010|ref|ZP_01823970.1| DNA repair protein RecO [Streptococcus pneumoniae SP9-BS68] gi|168489499|ref|ZP_02713698.1| DNA repair protein RecO [Streptococcus pneumoniae SP195] gi|147926892|gb|EDK77940.1| DNA repair protein RecO [Streptococcus pneumoniae SP9-BS68] gi|183572045|gb|EDT92573.1| DNA repair protein RecO [Streptococcus pneumoniae SP195] gi|332075692|gb|EGI86159.1| DNA repair protein RecO [Streptococcus pneumoniae GA17570] Length = 256 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 70/202 (34%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q L R R Sbjct: 5 ITSQGLVLYNRNFREDDKLVKIFTEQVGKRMFFVKHAGQSKLAPVIQPLVLARFLLRIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + Y L + + L+ L L + Sbjct: 65 DGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ L G L+ +CV S K G +C + Sbjct: 125 AGLDYQVLTNIFEIQNLTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDKRR 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q ID ++L Sbjct: 185 CHLNPNIPYLLNQFQAIDFETL 206 >gi|71274464|ref|ZP_00650752.1| Recombination protein O, RecO [Xylella fastidiosa Dixon] gi|71901685|ref|ZP_00683761.1| Recombination protein O, RecO [Xylella fastidiosa Ann-1] gi|170730566|ref|YP_001775999.1| DNA repair protein RecO [Xylella fastidiosa M12] gi|238687924|sp|B0U3E0|RECO_XYLFM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|71164196|gb|EAO13910.1| Recombination protein O, RecO [Xylella fastidiosa Dixon] gi|71728555|gb|EAO30710.1| Recombination protein O, RecO [Xylella fastidiosa Ann-1] gi|167965359|gb|ACA12369.1| DNA repair protein RecO [Xylella fastidiosa M12] Length = 243 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 65/215 (30%), Gaps = 12/215 (5%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG---QSHRMQPILQAGNLVRV 56 M + + A +L VR + E ++++EV+T+ YGR R + ++ LQ +R Sbjct: 1 MLIEHEVAFVLHVRPWRETSLLVEVLTQAYGRLGLIARGVQGLKKQTLRAALQPLQWIRF 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R + A L L L R +P P ELY + Sbjct: 61 SAIQRGELGQLRQAEALD---TAPRLKGETMLASFYINELLLRLVPRHAPVNELYLAYSQ 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSG----GAVC 172 + + E +L+ +G G +L + Sbjct: 118 TRERLRTNDSLAWSLRLFERDILETLGVGFNLECDANGTPLDPAAHYVLDPLEGPRRLLS 177 Query: 173 RSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQ 207 + +Q + + L + + Sbjct: 178 EHNNAERRDTATGHVLLALAHKQIPNTNDL-AGLR 211 >gi|254519864|ref|ZP_05131920.1| DNA repair protein RecO [Clostridium sp. 7_2_43FAA] gi|226913613|gb|EEH98814.1| DNA repair protein RecO [Clostridium sp. 7_2_43FAA] Length = 246 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 34/245 (13%), Positives = 75/245 (30%), Gaps = 19/245 (7%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SRLAQN 65 A+++ + + E + ++ + T G+ + + + + + L + + Sbjct: 8 AVVIKTKEFKENDKLVWLYTNNLGKITAIAKGARKSKSKLLSLTLPLCYGEYVLFKGKSL 67 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 ++ S L + Y + + E E L+ + + Sbjct: 68 FNLQEGKITNSFQGLLDNLDKLTYSSYICELIDICVEEGEVNEGLFKDFLTCMYLLNTDA 127 Query: 126 -VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV-----CRSVGLPY 179 + EL LLK G+GL+L CV + S R G+ Sbjct: 128 LDYEMLIRSFELRLLKATGYGLNLESCVSCRKKISVSNYISLSHYGGVCEECSREHGIYI 187 Query: 180 AEKMLVLPSFLWKE------EQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 ++ FL + + I+AD + ++T + + N L Sbjct: 188 SKPAYNAIRFLMRTPMDKIYKLNINADVKRDISKVTTF-----IISSNYSKKPKS-LEML 241 Query: 234 GKLLE 238 + E Sbjct: 242 NYIKE 246 >gi|307710078|ref|ZP_07646522.1| DNA repair protein RecO [Streptococcus mitis SK564] gi|307619058|gb|EFN98190.1| DNA repair protein RecO [Streptococcus mitis SK564] Length = 256 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 69/202 (34%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ ++Q L R R Sbjct: 5 ITSQGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQSKLASVIQPLVLARFLLRIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + Y L + + L+ L L + Sbjct: 65 DGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L+ +CV S K G +C Sbjct: 125 AGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGACLCPEHYHEDERC 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q ID ++L Sbjct: 185 CHLNPNIPYLLNQFQAIDFETL 206 >gi|308388650|gb|ADO30970.1| DNA repair protein (recombination protein o) [Neisseria meningitidis alpha710] Length = 248 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 65/211 (30%), Gaps = 11/211 (5%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L V +W Sbjct: 13 FLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASWYGSQELK 72 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 V GL + + +P ELYD L + + Sbjct: 73 TLHRAEWVGGWRQP---QGRALFSGLYVNELVLKLTAREDPMPELYDALAKVMEAVCREA 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV----CRSVGLPYAE 181 + E LL +G DL G AV + L + Sbjct: 130 NHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVCEDADALSHEA 189 Query: 182 KMLVLPSFLWK--EEQTIDADSLKSAFQLTD 210 +V L E A+SL+ A ++T Sbjct: 190 GAIVEGQSLIDLREGSFRTAESLQQALKITR 220 >gi|332519288|ref|ZP_08395755.1| DNA repair protein RecO [Lacinutrix algicola 5H-3-7-4] gi|332045136|gb|EGI81329.1| DNA repair protein RecO [Lacinutrix algicola 5H-3-7-4] Length = 239 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 76/233 (32%), Gaps = 8/233 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP----ILQAGNLVRV 56 M +AI+L Y + ++I++ T+++G +R + + Q + + Sbjct: 1 MIATTNAIVLSKLKYKDNDLIVKCYTQEFGIVSYLLRGVLKSKKKGSKVAYYQLLTQLHL 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYG-LQSIVPLFRFLPEREPCLELYDMLN 115 + A+ L + + + L ++ L L L L E E LY+ L Sbjct: 61 VTDYKQARGLQYVKEVKINHLYSNLHTNILKSAIVLFLAEVLSTTLQEEEQNATLYNYLE 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L + L L K++GF D+T + S C S Sbjct: 121 TTLQWLDTNDRYSNFHLLFLLNLTKHLGFYPDITDINLPYFNLQAGEFQDMSSSKYCISG 180 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL 228 K L+ +F EE +++ +S + + L Sbjct: 181 ENLTLLKTLLGTTFDALEEVKMNSKQRQSFLAIILLYFE---LHLGSFKKPKS 230 >gi|293556345|ref|ZP_06674926.1| DNA repair protein RecO [Enterococcus faecium E1039] gi|291601412|gb|EFF31683.1| DNA repair protein RecO [Enterococcus faecium E1039] Length = 270 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 61/186 (32%), Gaps = 2/186 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + +IL R+Y EK+ ++++ T G+ + +++ + P L R Sbjct: 6 ESKGLILSSRNYKEKDKLVKIFTESSGKMMFYIKEIHRQNQPLAPALLPFTEAVYIGNFR 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + + L YG + + + + + L+ L Sbjct: 66 SEGLSFLSSVKDVHAFRNIQEDIFLSGYGTYLLNLVDAAIEDHQYDPHLFQFTQQALQRM 125 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I E+ +L+ G T CVV G T+ S K GG +C Sbjct: 126 DQGDDAEIITNIFEVQILQRFGIAPIWTHCVVCGETKGKFDYSSKYGGVICEKHWPMDEH 185 Query: 182 KMLVLP 187 + P Sbjct: 186 RYHADP 191 >gi|125622947|ref|YP_001031430.1| DNA repair protein RecO [Lactococcus lactis subsp. cremoris MG1363] gi|166221896|sp|A2RHD8|RECO_LACLM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|124491755|emb|CAL96674.1| DNA repair protein recO [Lactococcus lactis subsp. cremoris MG1363] gi|300069687|gb|ADJ59087.1| DNA repair protein RecO [Lactococcus lactis subsp. cremoris NZ9000] Length = 251 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 69/203 (33%), Gaps = 2/203 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + ++L R+Y EK+ ++++ T +G+ + FV+N LQA ++ Sbjct: 5 ETQGLVLYSRNYKEKDKLVKIFTESFGKRMFFVKNFGKSPYASSLQAFTDGKLTATINDG 64 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + + + I + + + LY L L Sbjct: 65 GFSFIEDVSEVVVYKNISADIFINAHASYIISLADAAISDNQYDPALYGFLKRSLELLDQ 124 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + + EL +L G L+ ++C T S K G +C + Sbjct: 125 GFDMEVVTNIFELQVLHRFGVSLNFSECAFCHKTVGPFDFSYKFSGCLCPRHFDEDLRRS 184 Query: 184 LVLPS--FLWKEEQTIDADSLKS 204 + P+ +L Q I D LK Sbjct: 185 HLDPNVIYLINLFQEISLDELKK 207 >gi|54023419|ref|YP_117661.1| DNA repair protein RecO [Nocardia farcinica IFM 10152] gi|61214801|sp|Q5YZU4|RECO_NOCFA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|54014927|dbj|BAD56297.1| putative DNA repair protein [Nocardia farcinica IFM 10152] Length = 256 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 64/184 (34%), Gaps = 7/184 (3%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN 57 M ++D+A+++ GE + I+ ++TRQ+G + + R + L+ + + V Sbjct: 1 MRLYRDEAVVVRQHKLGEADRIVTLLTRQHGLVRAVAKGVRRTRSRFGARLEPFSYIDVQ 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE--PCLELYDMLN 115 + +ES A ++ +I+ L E P +L+ + Sbjct: 61 LHP-GRNLDTVTQVHTVESFAADIIDDYGRYTTACAILETAERLAGEERAPAPKLHALTA 119 Query: 116 IFLNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 L + L ++ G+ L +C +GGAVC Sbjct: 120 SALRAIAAKQRPHELVLDAYLLRAMRFAGWAPALDECAKCATPGPHRAFHVAAGGAVCVH 179 Query: 175 VGLP 178 P Sbjct: 180 CRPP 183 >gi|313837266|gb|EFS74980.1| DNA repair protein RecO [Propionibacterium acnes HL037PA2] gi|314928059|gb|EFS91890.1| DNA repair protein RecO [Propionibacterium acnes HL044PA1] gi|314972037|gb|EFT16135.1| DNA repair protein RecO [Propionibacterium acnes HL037PA3] gi|328907183|gb|EGG26949.1| DNA repair protein RecO [Propionibacterium sp. P08] Length = 246 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 60/184 (32%), Gaps = 8/184 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D A++L GE + I+ +++R++G+ R + S + L NLV + Sbjct: 4 YRDQAVVLRTHKLGEADRIVSMLSREHGKIRAVARGVRRTSSKFGARLDPFNLVDLQLVQ 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC-LELYDMLNIFLN 119 ++ + +LF + +P Y +L L Sbjct: 64 GRNLDVISQVECLHPYSAPLRQDYALFTAAEVMVEAADHLVPVDREPAPAQYRLLAGALR 123 Query: 120 CH-----KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 P + L L G+ DL CV SP GG VC + Sbjct: 124 VLGQGTTDGPRPPEMVLDSYLLRSLSAAGYAPDLVDCVQCRTPGPHPGFSPSLGGVVCIN 183 Query: 175 VGLP 178 P Sbjct: 184 CQPP 187 >gi|148380896|ref|YP_001255437.1| DNA repair protein RecO [Clostridium botulinum A str. ATCC 3502] gi|148290380|emb|CAL84507.1| DNA repair protein [Clostridium botulinum A str. ATCC 3502] Length = 247 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 29/252 (11%), Positives = 71/252 (28%), Gaps = 25/252 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SR 61 ++ A+++ + + E + ++ + T + G+ + + +R + + + + Sbjct: 4 YKTRAVVIKTQEFKEADKLVWLYTEKLGKITAIAKGAKKNRSKYLSNTSPFCYGEYVLYK 63 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 ++++S L YG + E+E EL+ L L Sbjct: 64 GKSLFNLSEVQLIDSFQDFLRDLDTLTYGSYFCELIDICTEEKESSRELFQELVKSLFLM 123 Query: 122 KIP-SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 K I + E+ +LK G+ L+ CV G + + Sbjct: 124 KNKVVDIEILARAFEMKVLKYTGYALNFNHCVECGRKIETSNYISLQSLGGICNYCNKIN 183 Query: 181 EKMLVLPSFLWKEE--------------QTIDADSLKSAFQLTDYFLNKYALQHNIIHCH 226 + ++ + T + + N + Sbjct: 184 GIGVTYATYNILKYIYAAPLEKLYRLSVDTETKKDIYKIL--------NTIINQNYLKKP 235 Query: 227 LLRENFLGKLLE 238 L + E Sbjct: 236 KS-LQILNYIKE 246 >gi|261391960|emb|CAX49424.1| DNA repair protein RecO (recombination protein O) [Neisseria meningitidis 8013] Length = 247 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 64/211 (30%), Gaps = 11/211 (5%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L V +W Sbjct: 12 FLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSASWYGSQELK 71 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 GL + + +P ELYD L + + Sbjct: 72 TLH---RAEWIGGWPQPQGRALFSGLYVNELMLKLTVREDPLPELYDALAEVMEAVCREA 128 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV----CRSVGLPYAE 181 + E LL +G DL G AV + L + Sbjct: 129 NHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVCEDADALSHEA 188 Query: 182 KMLVLPSFLWK--EEQTIDADSLKSAFQLTD 210 +V L E A+SL+ A ++T Sbjct: 189 GAIVEGQSLIDLREGSFRTAESLQQALKITR 219 >gi|296136814|ref|YP_003644056.1| DNA repair protein RecO [Thiomonas intermedia K12] gi|294340983|emb|CAZ89378.1| putative DNA repair protein recO (Recombination protein O) [Thiomonas sp. 3As] gi|295796936|gb|ADG31726.1| DNA repair protein RecO [Thiomonas intermedia K12] Length = 266 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 66/237 (27%), Gaps = 16/237 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E +++L+V +R++GR + + + +L +W R Sbjct: 34 YVLHSYPWKETSLLLDVFSRRHGRLALVAKGAKRPTSALRAVLLGFQPCHASWSGRGEVR 93 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + LS L G L R L + L+D + + Sbjct: 94 T---LTRAEWAGGLAPLSGLPLLCGFYFNELLVRLLAREDAHEGLFDAYHAGIAALAQRP 150 Query: 126 VI-----GKIFVQIELMLLKNIGFGLDLT-KCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + E LL+ +GF DL + + + V Sbjct: 151 HATAGELEPVLRSFEFSLLRELGFLPDLHLEGATSEPVLPDAFYRVDPDHGVSACSASDA 210 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQ-HNIIHCHLLRENFLGK 235 + L + +L A + L + L H R+ + Sbjct: 211 LAVRGEVLLALREGPPAEGDVALARAAKT----LMRSLLHYHLSGQMLRTRQLLIDL 263 >gi|256396146|ref|YP_003117710.1| DNA repair protein RecO [Catenulispora acidiphila DSM 44928] gi|256362372|gb|ACU75869.1| DNA repair protein RecO [Catenulispora acidiphila DSM 44928] Length = 243 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 59/178 (33%), Gaps = 5/178 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSR 61 +D+ ++L R+ GE + I+ +TR GR + + S + L+ V V + Sbjct: 5 RDEGVVLRTRNLGEADRIITFLTRDRGRVRAVAKGVRRTSSKFGSRLEPFTFVDVQIFEK 64 Query: 62 LAQNLGEFRFEVLESHCA--KLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 ++L + + + G + R + P ++ Y +L L Sbjct: 65 HGRDLHLVTQAETLAAYGGTLVSDYPAYTAGQAMLETAERLSEDDVPAVQQYLLLVGGLR 124 Query: 120 CHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + L L G+ C G + + +GGAVC Sbjct: 125 TLASGEHSAGLVLDAFLLRSLAIAGYAPSFEDCARCGDPGAHRFFNLPAGGAVCSDCK 182 >gi|261378403|ref|ZP_05982976.1| DNA repair protein RecO [Neisseria cinerea ATCC 14685] gi|296315083|ref|ZP_06865024.1| DNA repair protein RecO [Neisseria polysaccharea ATCC 43768] gi|269145175|gb|EEZ71593.1| DNA repair protein RecO [Neisseria cinerea ATCC 14685] gi|296837987|gb|EFH21925.1| DNA repair protein RecO [Neisseria polysaccharea ATCC 43768] Length = 246 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 65/210 (30%), Gaps = 10/210 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L V V+W Sbjct: 12 FMLASSPWRESSLWVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPVSVSWYGSQELK 71 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 V GL + + +P ELYD L + + Sbjct: 72 TLHRAEWVGGWRQP---QGRALFGGLYVNELVLKLTAREDPMPELYDALAEVMKAVCCEA 128 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA---VCRSVGLPYAEK 182 + E LL +G DL Q + A V R LP Sbjct: 129 DHVADLRRFEWKLLTALGVAPDLHTDGEGREIQSSARYCIRPEEAVMPVGRECVLPSETV 188 Query: 183 MLVLPSFLWK--EEQTIDADSLKSAFQLTD 210 ++ L A SL+ A ++T Sbjct: 189 IIADGQSLIDLQTGSFGSAQSLQDALKITR 218 >gi|283769576|ref|ZP_06342472.1| DNA repair protein RecO [Bulleidia extructa W1219] gi|283103844|gb|EFC05230.1| DNA repair protein RecO [Bulleidia extructa W1219] Length = 244 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 69/192 (35%), Gaps = 5/192 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M Q +L Y EK +I+ ++T++ G+ + + + + LQ V V + Sbjct: 1 MNDQTVGFVLKEVPYQEKAVIVSLLTKE-GKISFIAKGIRNINSKNAAALQLFTKVEVEY 59 Query: 59 RSR-LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 R + R + L + + + + R + E LY ++ Sbjct: 60 DHREGKELQVLKRAKPLCFYRHVYSDLQISSMASVLVDIVDRLVVLNEDTSNLYILIEKS 119 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + IFV LL+ GF ++ CV G + ++ S K GG +C Sbjct: 120 FDLWESNEKANMIFVLSLSTLLQEFGFEPNMDACVHCGKQE-VVSFSSKEGGFLCADHAQ 178 Query: 178 PYAEKMLVLPSF 189 M+ + Sbjct: 179 ELRNPMMKVNQL 190 >gi|134098078|ref|YP_001103739.1| DNA repair protein RecO [Saccharopolyspora erythraea NRRL 2338] gi|291007463|ref|ZP_06565436.1| DNA repair protein RecO [Saccharopolyspora erythraea NRRL 2338] gi|166221909|sp|A4F9T9|RECO_SACEN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|133910701|emb|CAM00814.1| DNA repair protein RecO [Saccharopolyspora erythraea NRRL 2338] Length = 273 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 67/178 (37%), Gaps = 6/178 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++D A++L V+ GE + I+ ++TR+YG+ + + R ++ + V + Sbjct: 4 YRDSAVVLRVQKLGEADRIITLLTRRYGKVRAVAKGVRRTTSRFGARVEPFCHIDVQLYT 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 ++ + + L++ A ++ +++ L E L L Sbjct: 64 GRTLDV-ITQVQTLDAFGAHIVDDYQRYTSACAVLETVDRLAAEEGEPVLRLYLLATGAL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + ++ LL+ + G+ L +C + +GGAVC Sbjct: 123 RALAGRERDSSLVLDAFLLRAMSFAGWAPALDECARCNARGPHAAFNVAAGGAVCAEC 180 >gi|322391156|ref|ZP_08064628.1| recombination protein O [Streptococcus peroris ATCC 700780] gi|321145909|gb|EFX41298.1| recombination protein O [Streptococcus peroris ATCC 700780] Length = 256 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 71/202 (35%), Gaps = 2/202 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++L R++ E + ++++ T Q G+ + FV++ ++ P++Q L R + Sbjct: 5 ITSRGLVLYNRNFREDDKLVKIFTEQAGKRMFFVKHAGQTKLAPVIQPLVLARFLMKVND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + Y L + L+ L L + Sbjct: 65 DGLSYIEDYREVMTFPKINSDLFVMAYATYVAALADASLQDNHEDAPLFAFLQKVLELME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ LL G L+ +C S K GG +C ++ Sbjct: 125 EGLDYQVLTNIFEIQLLTRFGISLNFNECTFCHRVGQAFDFSFKYGGCLCPDHYHEDEKR 184 Query: 183 MLVLP--SFLWKEEQTIDADSL 202 + P +L + Q ID ++L Sbjct: 185 CHLNPNIPYLLNQFQAIDFETL 206 >gi|222152223|ref|YP_002561398.1| DNA repair protein RecO [Streptococcus uberis 0140J] gi|222113034|emb|CAR40355.1| DNA repair protein RecO [Streptococcus uberis 0140J] Length = 257 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 72/200 (36%), Gaps = 2/200 (1%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 ++L R+Y E + ++++ T G+ + FV+N ++ ++Q + + Sbjct: 8 GLVLYNRNYREDDKLVKIFTETSGKRMFFVKNVGKSKLASVIQPLTIADFMMKLNEKGLS 67 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 + ++++ Y + + + E L+ L L+ + Sbjct: 68 YIEDYNSVQNYPKINQDLFKLSYASYLLALADAAISDNESDPHLFVFLKKTLDLMEEGLD 127 Query: 127 IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVL 186 + E+ +L G L+ +CV T S K G +C + + Sbjct: 128 YEVLTNIFEIQVLDRFGLHLNFNECVFCHRTGLPFDFSHKYSGLLCPQHFHEDLHRSHLD 187 Query: 187 PS--FLWKEEQTIDADSLKS 204 P+ +L + Q+I L S Sbjct: 188 PNVIYLLNQFQSIHFSDLNS 207 >gi|255323740|ref|ZP_05364868.1| DNA repair protein RecO [Corynebacterium tuberculostearicum SK141] gi|255299230|gb|EET78519.1| DNA repair protein RecO [Corynebacterium tuberculostearicum SK141] Length = 238 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 23/199 (11%), Positives = 49/199 (24%), Gaps = 6/199 (3%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR 59 ++D A+++ +GE + ++ ++TR +G + + + + LQ + V Sbjct: 4 NYRDRAVVIRTYDFGEADRVIVLLTRDHGLVRAVAKGVRRAKSRFGSRLQLFVNLDVQLY 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 V + + + R Sbjct: 64 VGKNLATISQADTVDYFGARLIEDYERYTAACAVLESAERLAFADAAHDPYLYESVTATL 123 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV---- 175 + L + + G+ L C P +GGA C Sbjct: 124 EQLQTADPTMALDAFLLQAMAHAGWAPSLFNCAQCNRPGPHHAFHPAAGGAACHECRPPG 183 Query: 176 GLPYAEKMLVLPSFLWKEE 194 + L L Sbjct: 184 AAEVDPETLHHLWLLAHNH 202 >gi|281490531|ref|YP_003352511.1| DNA repair protein RecO [Lactococcus lactis subsp. lactis KF147] gi|281374349|gb|ADA63882.1| DNA repair protein RecO [Lactococcus lactis subsp. lactis KF147] Length = 251 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 69/203 (33%), Gaps = 2/203 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + ++L R+Y EK+ ++++ T +G+ + FV+N LQA ++ Sbjct: 5 ETQGLVLYSRNYKEKDKLVKIFTESFGKRMFFVKNFGKSPYASSLQAFTDGKLTATINDG 64 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + + + I + + + LY L L Sbjct: 65 GFSFIEDVSEVVVYKNISSDIFINAHASYIISLADAAISDNQYDPGLYGFLKRSLELLDQ 124 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + + EL +L G L+ ++C T S K G +C + Sbjct: 125 GFDMEVVTNIFELQVLHRFGISLNFSECAFCHKTVGPFDFSYKFSGCLCPQHFDEDLRRS 184 Query: 184 LVLPS--FLWKEEQTIDADSLKS 204 + P+ +L Q I D LK Sbjct: 185 HLDPNVIYLVNLFQEISLDELKK 207 >gi|227504557|ref|ZP_03934606.1| DNA repair protein RecO [Corynebacterium striatum ATCC 6940] gi|227198877|gb|EEI78925.1| DNA repair protein RecO [Corynebacterium striatum ATCC 6940] Length = 239 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 59/223 (26%), Gaps = 7/223 (3%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR 59 ++D A+++ +GE + ++ ++TR +G G + + + + LQ + V Sbjct: 5 NFRDRALVIRSYDFGEADRVIVLLTRNHGLVRGVAKGVRRAKSRFGSRLQLFVNLDVQLY 64 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 V + + ++ R + Sbjct: 65 PGRNLYTISQADTVDYFGANIIEDYERYTAACAALESAERLAFTDADSDPYLYTALVHTL 124 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV---- 175 + L + + G+ L C P GGA C Sbjct: 125 QVMQYDDPLQALDAFLLQAMAHAGWAPSLFDCAQCQKPGPHHAFHPAVGGAACHECRPPG 184 Query: 176 GLPYAEKMLVLPSFLWKE-EQTIDADSLKSAFQLTDYFLNKYA 217 + L L + + A QLT L + Sbjct: 185 AAEVDPETLHHMWLLAHGCPSNPTHEQRQEAHQLTRAHLQWHL 227 >gi|15672040|ref|NP_266214.1| DNA repair protein RecO [Lactococcus lactis subsp. lactis Il1403] gi|13878683|sp|Q9CJD9|RECO_LACLA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|12722899|gb|AAK04156.1|AE006244_5 hypothetical protein L1006 [Lactococcus lactis subsp. lactis Il1403] gi|326405649|gb|ADZ62720.1| DNA repair protein RecO [Lactococcus lactis subsp. lactis CV56] Length = 251 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 69/203 (33%), Gaps = 2/203 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + ++L R+Y EK+ ++++ T +G+ + FV+N LQA ++ Sbjct: 5 ETQGLVLYSRNYKEKDKLVKIFTESFGKRMFFVKNFGKSPYASSLQAFTDGKLTATINDG 64 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + + + I + + + LY L L Sbjct: 65 GFSFIEDVSEVVVYKNISSDIFINAHASYIISLADAAISDNQYDPGLYGFLKRSLELLDQ 124 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + + EL +L G L+ ++C T S K G +C + Sbjct: 125 GFDMEVVTNIFELQVLHRFGISLNFSECAFCHKTVGPFDFSYKFSGCLCPQHFDEDLRRS 184 Query: 184 LVLPS--FLWKEEQTIDADSLKS 204 + P+ +L Q I D LK Sbjct: 185 HLDPNVIYLVNLFQEISLDELKK 207 >gi|77359685|ref|YP_339260.1| DNA repair protein recO (recombination protein O) [Pseudoalteromonas haloplanktis TAC125] gi|123587133|sp|Q3IDL0|RECO_PSEHT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|76874596|emb|CAI85817.1| DNA repair protein recO (Recombination protein O) [Pseudoalteromonas haloplanktis TAC125] Length = 230 Score = 86.8 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 76/230 (33%), Gaps = 13/230 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVR--NGQSHRMQPILQAGNLVRVNWRSRLA 63 A +L R Y + ++L+++ G+ R Q+ + + LQ + V++ + Sbjct: 7 RAYLLHRRPYSDSQVMLDMLVEGVGQLRMLARISGRQATKHKAQLQPFQALLVHYNGKYD 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + L G R +P EP +++ + N L Sbjct: 67 LK---YINKFELHGTPLFLKGDELYCGFYLNELTNRIVPINEPIDQVFQLYNTHLKNLNS 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + + + E LL+ +G+G+D + + S V V Sbjct: 124 GANLQAVLRSYEFQLLELLGYGVDFSFDASGEPIDEKRTYS--YFAEVGFLVQDDPRSGF 181 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 L AD L A Q L++Y L+ + + RE F Sbjct: 182 SGLQLNAIANHDFSQADVLYMAKQ-----LSRYLLKPLLGNKPLKSRELF 226 >gi|254468532|ref|ZP_05081938.1| DNA repair protein RecO [beta proteobacterium KB13] gi|207087342|gb|EDZ64625.1| DNA repair protein RecO [beta proteobacterium KB13] Length = 234 Score = 86.8 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 29/208 (13%), Positives = 69/208 (33%), Gaps = 5/208 (2%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 IL + E ++I+E ++ +GR + + R + LQ +++ W + Sbjct: 10 YILHTYPFKETSLIVEALSENFGRISLLAKGARRPRSLLRGYLQPFQMIQATWSNVSDLK 69 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 V + L + + G + + LP+ E ++ + L + Sbjct: 70 TLY---NVEWNSKYLGLKNQALICGFYMNELIMKLLPKDESSNVFFNFYHQQLEELSLNV 126 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + EL LL+ +G+ ++L + + ++ K++ Sbjct: 127 GYESLLRLFELKLLEELGYKVNLDEDENGNPINPKKFYYYEAEYGASLPDVSTNGVKIIG 186 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFL 213 ++LK + L Y + Sbjct: 187 QTLIDMHNNDYSHLNTLKQSKLLMRYLM 214 >gi|159039357|ref|YP_001538610.1| DNA repair protein RecO [Salinispora arenicola CNS-205] gi|157918192|gb|ABV99619.1| DNA repair protein RecO [Salinispora arenicola CNS-205] Length = 300 Score = 86.8 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 64/183 (34%), Gaps = 10/183 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++DDA++L V+ GE + I+ ++TR +GR R + + L+ V + Sbjct: 31 YRDDAVVLRVQKLGESDRIITLLTRGHGRLRAVARGVRRTTSKFGARLEPFGHVDLQLAG 90 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 N G + E ++ + + L ++ L E L Sbjct: 91 DPKGNQGSSLHTISQVEGIDLYGKRFLGDYPRYTAASAVCETAERLTPVEREPSLRLFQL 150 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + + ++ LL+ + G+ L C V G S +GGAVC Sbjct: 151 TLGALRALAGGEHAATLVLDAYLLRGMALAGWAPALAGCAVCGTPGRHRAFSVPAGGAVC 210 Query: 173 RSV 175 Sbjct: 211 LDC 213 >gi|32473195|ref|NP_866189.1| DNA repair protein recO [Rhodopirellula baltica SH 1] gi|32397874|emb|CAD73875.1| probable DNA repair protein recO [Rhodopirellula baltica SH 1] Length = 276 Score = 86.8 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 52/155 (33%), Gaps = 3/155 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 AI+L + E ++I+ ++T+ GR + + + + L ++ + + Sbjct: 5 STMAIVLRTVDFSETSLIVTLLTKDLGRISALAKGARRLKGPFEGSLDLLSVCAITLIDK 64 Query: 62 LAQNLGEFRFEVLESHC-AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L L S G L + + +P EL+DM + Sbjct: 65 PGDTLDLLTESKLRRRFRGAQRSLERLHAGYYIAEMLRLLVDDDDPHRELFDMTLSAMGM 124 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + K + + L+ +G +C V G Sbjct: 125 IDGEGHVAKTLLAFDAQCLRLLGHSPATQRCTVCG 159 >gi|23011689|ref|ZP_00051976.1| COG1381: Recombinational DNA repair protein (RecF pathway) [Magnetospirillum magnetotacticum MS-1] Length = 117 Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 42/109 (38%), Positives = 59/109 (54%), Gaps = 6/109 (5%) Query: 131 FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFL 190 V+ EL LL +GFGLDL+ C TG L++VSPKSG AV S G PY +++L LP FL Sbjct: 1 MVRFELALLAGLGFGLDLSHCAATGANDALVYVSPKSGRAVSASAGEPYRDRLLPLPPFL 60 Query: 191 WKEEQT------IDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 +Q D +++ F LT YFL+++ + R F+ Sbjct: 61 RDRDQPGSGWQTPDEHAVREGFTLTGYFLDQHVWRPRAQVMPEERARFV 109 >gi|329116597|ref|ZP_08245314.1| DNA repair protein RecO [Streptococcus parauberis NCFD 2020] gi|326907002|gb|EGE53916.1| DNA repair protein RecO [Streptococcus parauberis NCFD 2020] Length = 257 Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 72/202 (35%), Gaps = 2/202 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 Q I+L +++ E + ++++ T Q G+ + FV++ ++ ++Q + Sbjct: 5 QSHGIVLYNKNFREDDKLVKIFTEQAGKRMFFVKHAGKSKLSSVIQPLTAADFILKLNDI 64 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + +E++ Y L + E +L+ L L+ + Sbjct: 65 GLSYIEDYNQVETYKKINQDIFTLSYATYITALTDAALKDNEIDAQLFAFLKKTLDLMEE 124 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ CV T S K G +C + Sbjct: 125 GLDYEVMANIFEVQILDRFGVRLNFHDCVFCHRTGLPFDFSHKYSGVLCPQHYHEDIHRN 184 Query: 184 LVLPS--FLWKEEQTIDADSLK 203 + P+ +L + Q I D LK Sbjct: 185 HLDPNVVYLLDQFQAIHFDELK 206 >gi|303239951|ref|ZP_07326473.1| DNA repair protein RecO [Acetivibrio cellulolyticus CD2] gi|302592430|gb|EFL62156.1| DNA repair protein RecO [Acetivibrio cellulolyticus CD2] Length = 248 Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 27/208 (12%), Positives = 60/208 (28%), Gaps = 2/208 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SR 61 + +IL + GE + I+ + ++ G+ G + + + + + + Sbjct: 4 IKTKGVILKEINVGEADKIVTIFSKNKGKISGSAKGARRPKSSLVAGTQLFCYSEFVLFK 63 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 +V+E Y + + E +P + + L Sbjct: 64 GKDMYSLNSCDVIEPFYEIRNDLVKLTYAAHINEIITDIVQEEQPSARVLQLFLNSLYML 123 Query: 122 -KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 K +I E+ LL +G+ + C+ G + + Sbjct: 124 SKTEKAPEQIARVFEIRLLSILGYAPSVRGCIKCGSEDFTDFSFSFRKCGFLCKQCIEDD 183 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQL 208 L L + I ++KS F Sbjct: 184 RYALSLSEGAARAIHYIVHSNIKSVFNF 211 >gi|218515340|ref|ZP_03512180.1| DNA repair protein RecO [Rhizobium etli 8C-3] Length = 84 Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 47/83 (56%), Positives = 61/83 (73%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M WQD AIILG++ +GE ++I EVMTR GRHLG VR+G+S MQP+LQ GN V V WR+ Sbjct: 1 MQWQDHAIILGIKRHGETSVIAEVMTRDRGRHLGLVRSGRSRAMQPVLQPGNAVEVIWRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLS 83 RL ++LGEFR E + A+L+ Sbjct: 61 RLDEHLGEFRVEPVTLRAARLME 83 >gi|77918211|ref|YP_356026.1| RecO-domain-containing DNA repair protein [Pelobacter carbinolicus DSM 2380] gi|90103523|sp|Q3A8N7|RECO_PELCD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|77544294|gb|ABA87856.1| DNA replication and repair protein RecO [Pelobacter carbinolicus DSM 2380] Length = 258 Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 44/210 (20%), Positives = 77/210 (36%), Gaps = 5/210 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR 61 DA++L YGE + I+ + + + G G R + R + L+ + V + W+SR Sbjct: 5 SSDAVVLHHFDYGEADRIVTLFSLEKGLIKGIARQARKSRKRFGAALEPFSTVHMRWQSR 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLNIFLNC 120 ++L + L + L + L + L L +YD+L FL Sbjct: 65 SGRDLVTLQDAELIDLRSGLRHNLLAMALAAYGCELVENLVGETGAQPPVYDLLTAFLTH 124 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCRSVGLP 178 + + +EL LL G+ L C G T + + + GG++C Sbjct: 125 VNHHGGSEEARLLLELRLLCLSGYAPHLVHCCKCGASFTSETVAFAASLGGSLCLDCVTG 184 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQL 208 + L L S +L F+ Sbjct: 185 VDVQYLSLLSLGSLARALKAPLALFEGFRF 214 >gi|251781487|ref|YP_002995788.1| DNA repair protein RecO [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390115|dbj|BAH80574.1| DNA repair protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323126280|gb|ADX23577.1| DNA repair protein RecO [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 254 Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 72/199 (36%), Gaps = 2/199 (1%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 I+L R+Y E + ++++ T G+ + FV++ ++ ++Q ++ + Sbjct: 8 GIVLFNRNYREDDKLVKIFTETAGKRMFFVKHISRSKLSSVIQPLTAADFIFKLNESGLS 67 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 + ++++ Y + + + EP L+ L L+ + Sbjct: 68 YIDDYNHVDTYQQINQDLFRLSYASYVVALADAAISDNEPDPHLFAFLKKTLDLMEEGLD 127 Query: 127 IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVL 186 + E+ +L+ G ++ CV S G +C + + Sbjct: 128 YEVLTNIFEIQVLERFGIRINFHDCVFCHRVGLPFDFSHHYSGVLCPEHYHKDDYRNHLD 187 Query: 187 PS--FLWKEEQTIDADSLK 203 P+ +L QTI D L+ Sbjct: 188 PNVIYLLDRFQTIQFDELR 206 >gi|330937655|gb|EGH41560.1| DNA repair protein RecO [Pseudomonas syringae pv. pisi str. 1704B] Length = 199 Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 56/150 (37%), Gaps = 5/150 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A + R+Y E + +++ +T GR +R+ + + + + + V +R R Sbjct: 8 PAYVSHSRAYRENSALVDFLTP-QGRLRAVLRSAKG-KAGSLARPFVPLEVEFRGRGELK 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + A ++ G+ L R LP +P +++ L + Sbjct: 66 N---VGRMESAGVATWMTGEALFSGMYLNELLIRLLPAEDPHPAVFEHYAATLLALSLGR 122 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + E LL ++G+G + + Sbjct: 123 PLEPLLRSFEWRLLDDLGYGFAMDADINGE 152 >gi|28199178|ref|NP_779492.1| DNA repair protein RecO [Xylella fastidiosa Temecula1] gi|182681909|ref|YP_001830069.1| DNA repair protein RecO [Xylella fastidiosa M23] gi|32129944|sp|Q87C04|RECO_XYLFT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238691045|sp|B2I606|RECO_XYLF2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|28057284|gb|AAO29141.1| DNA repair protein RecO [Xylella fastidiosa Temecula1] gi|182632019|gb|ACB92795.1| DNA repair protein RecO [Xylella fastidiosa M23] gi|307578164|gb|ADN62133.1| DNA repair protein RecO [Xylella fastidiosa subsp. fastidiosa GB514] Length = 243 Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 66/215 (30%), Gaps = 12/215 (5%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG---QSHRMQPILQAGNLVRV 56 M + + A +L VR + E ++++EV+T+ YGR R + ++ LQ +R Sbjct: 1 MLIEHEVAFVLHVRPWRETSLLVEVLTQAYGRLGLIARGVQGLKKQTLRAALQPLQWIRF 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R + A L L L R +P P ELY + Sbjct: 61 SAIQRGELGQLRQAEALD---TAPRLKGETMLASFYINELLLRLVPRHAPVNELYLAYSQ 117 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA----VC 172 + + EL +L+ +G G +L + Sbjct: 118 TRERLRTNDSLAWSLRLFELDILETLGVGFNLECDANGTPLDPAARYVLDPLEGPRLLLS 177 Query: 173 RSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQ 207 + +Q + + L + + Sbjct: 178 EHNNAERRDTATGHVLLALAHKQIPNTNDL-AGLR 211 >gi|227833627|ref|YP_002835334.1| DNA repair protein [Corynebacterium aurimucosum ATCC 700975] gi|262184630|ref|ZP_06044051.1| DNA repair protein RecO [Corynebacterium aurimucosum ATCC 700975] gi|227454643|gb|ACP33396.1| DNA repair protein [Corynebacterium aurimucosum ATCC 700975] Length = 238 Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 54/180 (30%), Gaps = 4/180 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR 59 ++D A+++ +GE + I+ ++TR +G G + + + + LQ + V Sbjct: 4 NFRDRALVIRTYDFGEADRIIVLLTRHHGLVRGVAKGVRRAKSRFGSRLQLFVNLDVQLY 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREP-CLELYDMLNIFL 118 V + + ++ R P LY+ L Sbjct: 64 PGRNLYTISQADTVDYFGARIIEDYERYTSACAALESAERLAAADAPGDPYLYEACVDVL 123 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + L + + G+ L C P GGA C P Sbjct: 124 DKL-QHGDPLMLLDAFLLKAMSHAGWAPSLFDCAQCQRPGPHHAFHPAVGGAACHQCRPP 182 >gi|89889972|ref|ZP_01201483.1| putative DNA repair protein, RecO [Flavobacteria bacterium BBFL7] gi|89518245|gb|EAS20901.1| putative DNA repair protein, RecO [Flavobacteria bacterium BBFL7] Length = 240 Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 28/222 (12%), Positives = 68/222 (30%), Gaps = 5/222 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ----PILQAGNLVRV 56 M + AI+L YGE ++I + T++ G ++ + R Q + + Sbjct: 1 MLTRTPAIVLSTIKYGEADLIARLYTKELGTQSYMLKGVRKSRKGKLRVSYFQPLVQLEI 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER-EPCLELYDMLN 115 + +L + + + + + + + L +P ELY+ L+ Sbjct: 61 VTHHKGKGSLEYIKEAQVTPAYDTIHTDIVKSSVVMFFSEILTQLLTEQQPDSELYEYLS 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + ++ + L +GF DL + ++ Sbjct: 121 SIFQFLDQIDAVANFSIKTLIDLTSYMGFQPDLETVDLPYFNLLDGTFDTNGLLPHHATI 180 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYA 217 K + +F + ++ + S L + + Sbjct: 181 EESVLIKQFLGTNFAAIHQIKMNREERNSLLNLVIDYFQIHL 222 >gi|51891706|ref|YP_074397.1| DNA repair and genetic recombination protein [Symbiobacterium thermophilum IAM 14863] gi|61214898|sp|Q67RZ0|RECO_SYMTH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|51855395|dbj|BAD39553.1| DNA repair and genetic recombination protein [Symbiobacterium thermophilum IAM 14863] Length = 253 Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 59/153 (38%), Gaps = 2/153 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 D I++ VR++ + + I+ ++TR+ G+ R + R + V + ++ Sbjct: 7 DGIVIRVRNFQDADKIVVLLTREEGKVEAVARGARRPRNRFAAATQLFSHVRAQLFSGRS 66 Query: 66 -LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH-KI 123 + E++ES Y + + LPER+ Y +L L+ + Sbjct: 67 LDTLSQVEIVESFRQLREDLVRMAYATYACELVDALLPERQRQEAPYLLLLTSLHLWGEP 126 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + EL LL +GF L CV G Sbjct: 127 DRDPEPLLRAFELKLLSMLGFRPSLAACVGCGS 159 >gi|92113757|ref|YP_573685.1| DNA repair protein RecO [Chromohalobacter salexigens DSM 3043] gi|91796847|gb|ABE58986.1| DNA repair protein RecO [Chromohalobacter salexigens DSM 3043] Length = 234 Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 5/146 (3%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRL 62 + A +L R+Y E + I+E++T GR + Q + + ILQ + + V W Sbjct: 4 EPAFLLHKRAYRETSAIVELLTLGQGRVRAVAQGVQRGGSKARGILQPFSPLHVTWSGNG 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 A LL+ L G+ + L R LP P E++ + + L Sbjct: 64 DLKRLRLLESQ---GSAALLAGEGLLCGVYANELLARTLPLEYPAGEVFSLYALTLEALP 120 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDL 148 P+ ++E+ LL+ + Sbjct: 121 SPAKRAGALRRLEITLLETLDAAPRF 146 >gi|317125251|ref|YP_004099363.1| DNA replication and repair protein RecO [Intrasporangium calvum DSM 43043] gi|315589339|gb|ADU48636.1| DNA replication and repair protein RecO [Intrasporangium calvum DSM 43043] Length = 242 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 67/226 (29%), Gaps = 11/226 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D+AI+L GE + I+ ++TR GR + + + + L+ G +V V Sbjct: 4 YRDEAIVLRTHKLGEADRIITMLTRTRGRVRAVAKGVRRTKSRFGSRLEPGMVVDVQCYE 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + + + + + E EP + Y +L L Sbjct: 64 GRNLDTVTQVETLASYGDVIARDYAAWTAASAMLETSIQLTEEHEPQAQQYLLLAGALRA 123 Query: 121 HKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + L L G+ C G + ++GGAVC P Sbjct: 124 LSERVHDPSLVLDAFLLRSLAVAGWAPSFHDCARCGAEGPQRAFNVQAGGAVCPLCRPPG 183 Query: 180 AEKMLVLPSFLW--------KEEQTIDADSLKSAFQLTDYFLNKYA 217 + L D + L FL + Sbjct: 184 SSAPAPETFALLAALLSGDWDVADASDDRQRRQGSGLVAAFLQWHL 229 >gi|296130029|ref|YP_003637279.1| DNA repair protein RecO [Cellulomonas flavigena DSM 20109] gi|296021844|gb|ADG75080.1| DNA repair protein RecO [Cellulomonas flavigena DSM 20109] Length = 243 Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 72/207 (34%), Gaps = 9/207 (4%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVN 57 M ++D+AI+L GE + I+ ++TR++G+ + + R L+ V V Sbjct: 1 MNLYRDEAIVLRTHKLGEADRIVTLLTREHGKVRAVGKGVRRTTSRFGSRLEPFMHVDVQ 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCL-ELYDMLNI 116 + ++ + +L+ G + R + + Y +L Sbjct: 61 LSTGRNLDVVTQVETLGPYGRHISEDYALYTVGTAMLETAERLVEAEREPAVQQYRLLVG 120 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 + + + ++ LL+ + G+ T C G +P GGAVC Sbjct: 121 AVRALATRAHAPGLV--LDSYLLRALAVAGWAPSFTDCARCGEPGPHHAFAPAVGGAVCL 178 Query: 174 SVGLPYAEKMLVLPSFLWKEEQTIDAD 200 + P A L + D + Sbjct: 179 TCRPPGAAAPAPETFALLAALLSGDWE 205 >gi|121605950|ref|YP_983279.1| DNA repair protein RecO [Polaromonas naphthalenivorans CJ2] gi|166221904|sp|A1VRT0|RECO_POLNA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|120594919|gb|ABM38358.1| DNA repair protein RecO [Polaromonas naphthalenivorans CJ2] Length = 249 Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 48/150 (32%), Gaps = 7/150 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSR 61 + A +L + E ++IL+V TR +GR R + +PIL + V + Sbjct: 8 NEPAYVLHRYDWSESSLILDVFTRHHGRVALVARGAKKPSSSFRPILLPLQPLHVAF--- 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + S L G L R L +P L+D + Sbjct: 65 GGDAEIRNLKSAEWQGGHVMPSGDALLSGYYLNELLMRLLARDDPHPLLFDAYAATVQLL 124 Query: 122 KIPSVI--GKIFVQIELMLLKNIGFGLDLT 149 + EL LL+ IG L Sbjct: 125 ASQNPDTLQLALRAFELRLLQGIGLLPRLD 154 >gi|332284934|ref|YP_004416845.1| DNA repair protein RecO [Pusillimonas sp. T7-7] gi|330428887|gb|AEC20221.1| DNA repair protein RecO [Pusillimonas sp. T7-7] Length = 194 Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 53/143 (37%), Gaps = 6/143 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQ 64 +L + E ++I++ TR +G + + +P+L A + ++W Sbjct: 13 GYLLHSAPWRETSLIVQAFTRHHGVVALVAKGAKRPYSVLRPVLSAFQPLALSWSGANEV 72 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 ES + L ++ L R LP +P LY+ ++ L + Sbjct: 73 KT----LTRAESMGIRKLGGQAYMSAWYMNELLLRLLPREDPHPVLYEAYDVALQRLALQ 128 Query: 125 SVIGKIFVQIELMLLKNIGFGLD 147 + E +LL G+G++ Sbjct: 129 RSAASALRRFEWILLNETGYGIE 151 >gi|322410830|gb|EFY01738.1| DNA repair protein RecO [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 254 Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 72/199 (36%), Gaps = 2/199 (1%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 I+L R+Y E + ++++ T G+ + FV++ ++ ++Q ++ + Sbjct: 8 GIVLFNRNYREDDKLVKIFTEAAGKRMFFVKHISRSKLSSVIQPLTAADFIFKLNESGLS 67 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 + ++++ Y + + + EP L+ L L+ + Sbjct: 68 YIDDYNHVDTYQQINQDLFRLSYASYVVALADAAISDNEPDPHLFAFLKKTLDLMEEGLD 127 Query: 127 IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVL 186 + E+ +L+ G ++ CV S G +C + + Sbjct: 128 YEVLTNIFEIQVLERFGIRINFHDCVFCHRVGLPFDFSHHYSGVLCPEHYHKDDYRNHLD 187 Query: 187 PS--FLWKEEQTIDADSLK 203 P+ +L QTI D L+ Sbjct: 188 PNVIYLLDRFQTIQFDELR 206 >gi|325107899|ref|YP_004268967.1| DNA repair protein recO [Planctomyces brasiliensis DSM 5305] gi|324968167|gb|ADY58945.1| DNA repair protein recO [Planctomyces brasiliensis DSM 5305] Length = 249 Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 20/159 (12%), Positives = 53/159 (33%), Gaps = 3/159 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + + I++ + E + ++ TR +G+ + + + + + ++ + + Sbjct: 6 KTEGIVIRQADFSESSRVVTFFTRDFGKISALAKGAKRLKGPFEAAIDLLTRCQIVFLHK 65 Query: 62 LAQNLGEFRFEVLESHC-AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 L L + ++ GL L + +P YD L+ Sbjct: 66 STDRLDLLTEAKLVQRFGPDVRDVNVHYAGLYVAELLNSCSEQFDPAPAWYDAAVATLDR 125 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 ++ ++ EL L+ +G + C +D Sbjct: 126 LRMTGDYRLELLRFELFTLQVLGLLPEFENCRCGRPVED 164 >gi|320548079|ref|ZP_08042359.1| recombination protein O [Streptococcus equinus ATCC 9812] gi|320447321|gb|EFW88084.1| recombination protein O [Streptococcus equinus ATCC 9812] Length = 251 Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 75/206 (36%), Gaps = 3/206 (1%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M ++ ++L R+Y E + ++++ T G+H+ FVR+ R ++Q + + + Sbjct: 1 MQTKETYGLVLYNRNYREDDKLVKIFTETDGKHMFFVRHAGKSRFNSVIQPLTIAKFIVK 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 ++ + S Y +P+ +L+ LN L+ Sbjct: 61 INDNGLSFIEDYKEVASFKEINADLFKLSYASYVTSLADAAVPDNVADSQLFAFLNKTLS 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + E+ +L+ G L+L +C S K G +C Sbjct: 121 LMEEGLDYEILTNIFEIQILERFGISLNLHECAFCHRVGLPFDFSHKYTGLLCPEHYAKD 180 Query: 180 AEKMLVLPS--FLWKEEQTIDADSLK 203 + V P+ +L Q I D LK Sbjct: 181 EHRSHVDPNMLYLLDRFQAIQFDELK 206 >gi|42559449|sp|Q7USC2|RECO_RHOBA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 270 Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 3/152 (1%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLAQ 64 AI+L + E ++I+ ++T+ GR + + + + L ++ + + Sbjct: 2 AIVLRTVDFSETSLIVTLLTKDLGRISALAKGARRLKGPFEGSLDLLSVCAITLIDKPGD 61 Query: 65 NLGEFRFEVLESHC-AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L L S G L + + +P EL+DM + Sbjct: 62 TLDLLTESKLRRRFRGAQRSLERLHAGYYIAEMLRLLVDDDDPHRELFDMTLSAMGMIDG 121 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + K + + L+ +G +C V G Sbjct: 122 EGHVAKTLLAFDAQCLRLLGHSPATQRCTVCG 153 >gi|312196054|ref|YP_004016115.1| DNA repair protein RecO [Frankia sp. EuI1c] gi|311227390|gb|ADP80245.1| DNA repair protein RecO [Frankia sp. EuI1c] Length = 243 Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 72/204 (35%), Gaps = 6/204 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+ ++L GE + I+ + TR+ GR + + S R L+ V + Sbjct: 4 YRDEGVVLRTMPLGEADRIVTLFTRRNGRVRAVAKGVRRTSSRFGARLEPAMYVDLQLHQ 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + + ++L S+ A L + ++ L E L L + Sbjct: 64 GRSLDT-VTQADLLGSYGAVLATDYARHTAAAVMLETAERLTSEEREPALRLFLLLVGGL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + S + ++ LL+ + G+G+ L C G VS GG VC Sbjct: 123 RTLASGEHPPGLVMDAFLLRALAVSGYGMALDDCARCGEPGPHPSVSVAGGGVVCPRCRP 182 Query: 178 PYAEKMLVLPSFLWKEEQTIDADS 201 A + V L + D Sbjct: 183 HGAASVSVTAVQLLADLLHGDWAE 206 >gi|330469589|ref|YP_004407332.1| DNA repair protein reco [Verrucosispora maris AB-18-032] gi|328812560|gb|AEB46732.1| DNA repair protein reco [Verrucosispora maris AB-18-032] Length = 270 Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 67/183 (36%), Gaps = 10/183 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++DDA++L V+ GE + I+ ++TR++GR R + + L+ V + Sbjct: 9 YRDDAVVLRVQKLGESDRIVTLLTRRHGRLRAVARGVRRTTSKFGARLEPFGHVDLQLAG 68 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 LG + E ++ + + L +I L E L Sbjct: 69 DPKGELGSSLHTVSQVEGIDLYGKRFLGDYPRYTAASAIAETAERLTPVEREPSLRLFQL 128 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + I + ++ LL+ + G+ LT C V G S +GGAVC Sbjct: 129 TLGALRALAQGEHAITLVLDAYLLRGMALAGWAPALTACAVCGTPGRHRAFSVPAGGAVC 188 Query: 173 RSV 175 Sbjct: 189 PDC 191 >gi|258652079|ref|YP_003201235.1| DNA repair protein RecO [Nakamurella multipartita DSM 44233] gi|258555304|gb|ACV78246.1| DNA repair protein RecO [Nakamurella multipartita DSM 44233] Length = 248 Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 67/190 (35%), Gaps = 6/190 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D A++L V GE + I+ ++TR+ G+ + + + + L+ + V + + Sbjct: 4 YRDSAVVLRVTKLGEADRIVSLLTRRTGKVRAVAKGVRRTKSKFGGRLEPFSHVDLQLYA 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + E L+ A L + +I L E L L + Sbjct: 64 -GRNLDIVTQAETLDPFGATLAADYSRYTCATAIAETAERLTAEEREPSLRLYLLVVSAL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + ++ LL+ + G+ L +C G SGGA+C Sbjct: 123 RALTESGRGPSLILDAFLLRAMVLAGWAPALRECARCGSPGPHSAFHVPSGGALCPDCRS 182 Query: 178 PYAEKMLVLP 187 + + P Sbjct: 183 GSSGSVRPAP 192 >gi|260061484|ref|YP_003194564.1| DNA repair protein [Robiginitalea biformata HTCC2501] gi|88785616|gb|EAR16785.1| DNA repair protein [Robiginitalea biformata HTCC2501] Length = 239 Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 68/216 (31%), Gaps = 8/216 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI----LQAGNLVRV 56 M AI+L YGE ++I+ + T GR ++ R + Q + + Sbjct: 1 MPTSTKAIVLSSLKYGESSLIVRMYTEASGRQTYMLKGILKRRKGGLRPGFFQPLTQLEI 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLN 115 + LG R ++ A + S L L + E E EL+ L Sbjct: 61 VSGTVRPGRLGYLREALIAYPYATVHSDIRKGAIALFLSEVLSESIREEETNPELFSYLE 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L I ++ + L + +GF D T K G + Sbjct: 121 HTLQWLDQHQRIANFHIRFLMGLTRYLGFYPDQTDSHAPYFDLSEGAYCSKPGLNPVLAD 180 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDAD---SLKSAFQL 208 G A + ++ +F + L ++ L Sbjct: 181 GNLEAFRNILGTNFDAIHTVELTQAERRELLNSLIL 216 >gi|20532233|sp|Q97JI4|RECO_CLOAB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|325508710|gb|ADZ20346.1| DNA repair protein RecO [Clostridium acetobutylicum EA 2018] Length = 247 Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 33/244 (13%), Positives = 75/244 (30%), Gaps = 9/244 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RSR 61 ++ ++L + E + I+ + T + G+ R + +R + + N N+ + Sbjct: 4 FKSRGVVLKSQDINENDKIIWIFTEKMGKISVIARGAKKNRSKYLPITINFCFGNFVFFK 63 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 E+++S L Y + + E E +L+ Sbjct: 64 GKSMFSLNEGEIIDSFQEFLSDFDTLTYCSYLCELIDISMAEGESNRDLFKEFVSTFYLI 123 Query: 122 KIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV-----CRSV 175 K I + EL LL+ G+ L+L C + + Sbjct: 124 KNKVGDIETLSRAFELKLLRYTGYNLNLDYCSKCKKRINSASYISYKYYGGICGDCSKEG 183 Query: 176 GLPYAEKMLVLPSFLWK-EEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 G+ ++L K + + +L + + + + + N + L Sbjct: 184 GMSVTPAAYSSLNYLSKLPIEKVYRVNLNDNIKNEMFEILRGFISQNYAKIPKS-LDLLN 242 Query: 235 KLLE 238 + E Sbjct: 243 IIKE 246 >gi|116617892|ref|YP_818263.1| DNA replication and repair protein RecO [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122271907|sp|Q03Y32|RECO_LEUMM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|116096739|gb|ABJ61890.1| DNA replication and repair protein RecO [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 259 Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 68/237 (28%), Gaps = 17/237 (7%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS----R 61 I+L R Y + ++++ ++T YG R + + V + R Sbjct: 5 RGIVLYTRQYKDNDLLVRILTETYGMRTFLARGAKKATSKLSAGTQPYTIVTFDGALPKR 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + ++ + + Y + E E Y+ L + L Sbjct: 65 ETGLGYMNDVQDIKVYSRLIEDIEANAYAALIASLIDASFEEGEKITRWYNQLYVALQKL 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I E+ LL +G +L +TG S K G + + Sbjct: 125 DEGLDPQIIANIFEIQLLVPLGVAPNLRADPITGQVDGKFDYSEKYNGIISEHHFNLDDQ 184 Query: 182 KMLVLPS--FLWKEEQTIDADSLKS---------AFQLTDYFL-NKYA-LQHNIIHC 225 ++++ F ++ ID + Q ++ K L+ Sbjct: 185 RLMLDQKTVFYLRQFSVIDMRQVHDIKMSAITKRGLQRVIDYIYEKQVGLKPRAKSF 241 >gi|285019299|ref|YP_003377010.1| recombination protein o [Xanthomonas albilineans GPE PC73] gi|283474517|emb|CBA17018.1| probable recombination protein o [Xanthomonas albilineans] Length = 256 Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 68/245 (27%), Gaps = 14/245 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + +L + E ++++E+++ +GR R Q + Q + ++ S Sbjct: 1 MIEHEPGFVLHAWPWRETSLLVEILSVHHGRLGVLARGVQGPKKQALRATLQPLQSIRFS 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + A L+ L G R P +P +LY Sbjct: 61 AQRRGELAQLRAAEPLDTAPRLTGEAMLAGFYINELTLRLAPRDDPAPDLYLAYARVRAR 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA---VCRSVGL 177 + + E +L+ +G DL + + R G Sbjct: 121 LAAEAPLAWSLRCFERDMLEALGVWFDLRHDGDGAPIDPAARYALDPEHGPRRLLRDHGH 180 Query: 178 PYAEKMLVLPSFLWKEEQTI----DADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 M + L + T+ D L+ ++ L H E Sbjct: 181 DQRSGMATGRALLALADDTLPVAEDLPGLRRGMRVV-------LLHHLGGRGLKSWEMLE 233 Query: 234 GKLLE 238 L + Sbjct: 234 NLLRK 238 >gi|160871667|ref|ZP_02061799.1| DNA repair protein RecO [Rickettsiella grylli] gi|159120466|gb|EDP45804.1| DNA repair protein RecO [Rickettsiella grylli] Length = 238 Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 72/235 (30%), Gaps = 16/235 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ-----SHRMQPILQAGNLVRVNWRSR 61 A IL R Y + +++++ T Q+GR + + R + LQA + ++WR + Sbjct: 10 AYILHTRPYRDTSLLIDAFTAQHGRISLIAKGARGIRGKKSRFKGTLQAFVPLLLSWRGK 69 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + L+ L G L L +P EL+ L Sbjct: 70 TDLLSLINAEPHM--FPLPPLTGPLLACGFYLNELLTYLLYRYDPYPELFHAYQTTLYRL 127 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT---QDLLWVSPKSGGAVCRSVGLP 178 + E LL +G+ L L K T P G C + +P Sbjct: 128 FDNPMFA--LRLFEKKLLAELGYALSLNKESRTHQALLPHQFYQFIPSQGLVDCFNQSIP 185 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFL 233 E L A +L L Y L+ RE F+ Sbjct: 186 QQFIFSGASLLAMHHESWDTPSHLLDAKRLFRLAL-NYLLE---GKTIRSRELFI 236 >gi|315925209|ref|ZP_07921423.1| recombination protein O [Pseudoramibacter alactolyticus ATCC 23263] gi|315621443|gb|EFV01410.1| recombination protein O [Pseudoramibacter alactolyticus ATCC 23263] Length = 255 Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 62/205 (30%), Gaps = 3/205 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR-L 62 + A+++ + + + + IL + T G+ + + + + N+ Sbjct: 5 RTKALVIREQPFQDHDKILTLFTETEGKQKAIAKGARRRKGSLGVATQLFAYGNFVYYPG 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH- 121 ++E+ A G + L F + EL L Sbjct: 65 KNFANINEVTLIEAFYALRGDVMKMALGSYLLELLDVFFDFYQGDPELLKAATHILYYLS 124 Query: 122 -KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + + V +L L + G G LT+CV +G + L S GG V + Sbjct: 125 ENMAASDEALAVGFQLKLTRRQGLGPVLTRCVRSGEREALTAFSIADGGVVTEAYRRAGD 184 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSA 205 + + + + Sbjct: 185 QALSADLRRALERLMGESIRDICHG 209 >gi|150015732|ref|YP_001307986.1| DNA repair protein RecO [Clostridium beijerinckii NCIMB 8052] gi|149902197|gb|ABR33030.1| DNA repair protein RecO [Clostridium beijerinckii NCIMB 8052] Length = 249 Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 54/170 (31%), Gaps = 2/170 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-S 60 + A+I+ + + E + ++ T + G+ VR + + + + L + Sbjct: 6 IVETKAVIIKTQDFKENDKLVWFYTEKLGKITAIVRGAKKSKSKFLALTLPLCYGEYMVY 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + ++++S L Y + + E +EL+ L L Sbjct: 66 KGKSLYTLQEGKIIQSFQGLLNDLHKLTYSSYLCELIDIACTDNEINMELFKTLITTLYL 125 Query: 121 HKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 + + EL LLK G+ L L C V S Sbjct: 126 LNTDALDYELLIRAFELRLLKTTGYNLTLNNCSVCRKKISSSNYISLSHY 175 >gi|311741367|ref|ZP_07715191.1| recombination protein O [Corynebacterium pseudogenitalium ATCC 33035] gi|311303537|gb|EFQ79616.1| recombination protein O [Corynebacterium pseudogenitalium ATCC 33035] Length = 238 Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 23/199 (11%), Positives = 48/199 (24%), Gaps = 6/199 (3%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR 59 ++D A+++ +GE + ++ ++TR +G + + + + LQ + V Sbjct: 4 NYRDRAVVIRTYDFGEADRVIVLLTRDHGLVRAVAKGVRRAKSRFGSRLQLFVNLDVQLY 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 V + + + R Sbjct: 64 VGKNLATISQADTVDYFGARLIEDYERYTAACAVLESAERLAFADAAHDPYLYDSVTATL 123 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV---- 175 + L + + G+ L C P GGA C Sbjct: 124 EQLQTADPTMALDAFLLQAMAHAGWAPSLFNCAQCNRPGPHHAFHPAVGGAACHECRPPG 183 Query: 176 GLPYAEKMLVLPSFLWKEE 194 + L L Sbjct: 184 AAEVDPETLHHLWLLAHNH 202 >gi|22536205|ref|NP_687056.1| DNA repair protein RecO [Streptococcus agalactiae 2603V/R] gi|25010094|ref|NP_734489.1| DNA repair protein RecO [Streptococcus agalactiae NEM316] gi|42559476|sp|Q8E2G8|RECO_STRA5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|42559477|sp|Q8E7X6|RECO_STRA3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|22533023|gb|AAM98928.1|AE014192_4 recombination protein O [Streptococcus agalactiae 2603V/R] gi|23094445|emb|CAD45664.1| Unknown [Streptococcus agalactiae NEM316] Length = 253 Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 64/197 (32%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 Q ++L R+Y E + ++++ T G+ + FV++ + +LQ + + Sbjct: 5 QTYGLVLYNRNYREDDKLVKIFTETEGKRMFFVKHASKSKFNAVLQPLTIAHFILKINDN 64 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ + + Y + + +L+ L L + Sbjct: 65 GLSYIDDYKEVLAFQETNSDLFKLSYASYITSLADVAISDNVADAQLFIFLKKTLELIED 124 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ LL+ G L+ CV S K G +C + + Sbjct: 125 GLDYEILTNIFEVQLLERFGVALNFHDCVFCHRVGLPFDFSHKYSGLLCPNHYYKDERRN 184 Query: 184 LVLPSFLWKEEQTIDAD 200 + P+ L+ + Sbjct: 185 HLDPNMLYLINRFQSIQ 201 >gi|212715506|ref|ZP_03323634.1| hypothetical protein BIFCAT_00404 [Bifidobacterium catenulatum DSM 16992] gi|212661588|gb|EEB22163.1| hypothetical protein BIFCAT_00404 [Bifidobacterium catenulatum DSM 16992] Length = 242 Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 65/208 (31%), Gaps = 11/208 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 +QD+ ++L GE + I+ ++TR +G+ + + + + L+ V + + Sbjct: 4 YQDEGVVLRTVKLGEADRIVTLLTRDHGKIRAVAKGVRRTKSRFGGRLEPFMRVSL-LIA 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL--PEREPCLELYDMLNIFL 118 + E + ++ + + I L E E + Y ++ L Sbjct: 63 EGRSLDVISQAESVSAYARGICTDFKAYTAANVICETADKLVVTEHERSVAQYRLVLGAL 122 Query: 119 NCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 N K I + L G+ L CVV G +S S G Sbjct: 123 NALSKHAHEAAVIGDSYVMRALAIAGWTPRLRACVVCGDP-----ISADRTWFFSISAGG 177 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSA 205 + SF +L Sbjct: 178 LMCSTDHIRESFDVSWNAICQLQALVDG 205 >gi|116750901|ref|YP_847588.1| recombination protein O, RecO [Syntrophobacter fumaroxidans MPOB] gi|171460804|sp|A0LP01|RECO_SYNFM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|116699965|gb|ABK19153.1| Recombination protein O, RecO [Syntrophobacter fumaroxidans MPOB] Length = 250 Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 53/153 (34%), Gaps = 1/153 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + +AIIL R +GE + ++ + TR GR G + + R + V + R Sbjct: 5 RTEAIILNTRDHGESDRLVGLYTRSGGRLQGIAKGARRSRKRFANTLEPCSLVELQFREK 64 Query: 64 QNLGEFRFEV-LESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 L LE + + + +PE +P EL+++L L Sbjct: 65 GTLVWLESCKLLEPFLSLRTELIRWGIAALISEIVIEMVPEGDPQPELFELLKETLRQLC 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + +G+ L C + G Sbjct: 125 EDKDSLNVALLFIFRFQDKMGYLPALENCGICG 157 >gi|269956964|ref|YP_003326753.1| DNA repair protein RecO [Xylanimonas cellulosilytica DSM 15894] gi|269305645|gb|ACZ31195.1| DNA repair protein RecO [Xylanimonas cellulosilytica DSM 15894] Length = 258 Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 70/204 (34%), Gaps = 6/204 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++DDAI+L GE + I+ ++TR+ G+ G + + S R L+ +V V Sbjct: 13 YRDDAIVLRTHKLGEADRIVTLLTRENGKVRGVAKGVRRTSSRFGARLEPFMVVDVQLHV 72 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + + ++ + + ++ L E E + + Sbjct: 73 GRSLDTVTQVET-IGAYARTICEDYVLYTAGAPMLEAADRLVEAEREPAVQQYWLLAGAL 131 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + ++ LL+ + G+ T C G S +GGAVC Sbjct: 132 RALAQRDHAPSLVLDSYLLRALAVAGWAPSFTDCARCGEPGPHHSFSVATGGAVCSRCRP 191 Query: 178 PYAEKMLVLPSFLWKEEQTIDADS 201 P + L T D + Sbjct: 192 PGSTAPAPETFELLAALLTGDWAT 215 >gi|33593413|ref|NP_881057.1| hypothetical protein BP2429 [Bordetella pertussis Tohama I] gi|33572769|emb|CAE42701.1| hypothetical protein BP2429 [Bordetella pertussis Tohama I] gi|332382822|gb|AEE67669.1| hypothetical protein BPTD_2387 [Bordetella pertussis CS] Length = 195 Score = 85.6 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 52/144 (36%), Gaps = 6/144 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L ++ E ++I++ +R+YG + + +P+L A + ++W Sbjct: 12 PGYMLHATAWRETSLIVQAFSREYGCIALVAKGAKRPYSVLRPVLSAFQPLLLSWSGAGE 71 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 E + L + L R LP + LYD + L Sbjct: 72 VKTMTRA----EIAGVRPLGGPALMSAWYMNELLLRLLPCEDAHPVLYDAYDTALTQLSA 127 Query: 124 PSVIGKIFVQIELMLLKNIGFGLD 147 S + E +LL+ G+GLD Sbjct: 128 GSRAAGALRRFEWILLRETGYGLD 151 >gi|262203043|ref|YP_003274251.1| DNA repair protein RecO [Gordonia bronchialis DSM 43247] gi|262086390|gb|ACY22358.1| DNA repair protein RecO [Gordonia bronchialis DSM 43247] Length = 252 Score = 85.6 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 56/183 (30%), Gaps = 5/183 (2%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN 57 M + +D+A++L GE + I+ ++T ++G + + + L+ V V+ Sbjct: 1 MRFYRDEAVVLRQHKLGEADRIITLLTAEHGLVRAVAKGVRRTRSKFGARLEPFAHVDVH 60 Query: 58 -WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R + + S ER P +L+ + Sbjct: 61 LYPGRNLDVVTQVHSLHAYSDAIAADYGRYTTACAVLETAERLAGEERAPAPQLHRLTVG 120 Query: 117 FLNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L + I L + G+ L +C GGAVC Sbjct: 121 ALAALAEDRRPRELILDAFLLRAMHCAGWMPALDECARCATPGPHRAFHVAVGGAVCLHC 180 Query: 176 GLP 178 P Sbjct: 181 RPP 183 >gi|88855029|ref|ZP_01129694.1| DNA repair protein RecO [marine actinobacterium PHSC20C1] gi|88815557|gb|EAR25414.1| DNA repair protein RecO [marine actinobacterium PHSC20C1] Length = 242 Score = 85.6 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 67/183 (36%), Gaps = 4/183 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++D+A++L GE + I+ +++R++G+ + + + L+ + + Sbjct: 4 YRDEAVVLRTHKLGEADRIVTMLSREHGKIRAVAKGVRRTASKFGARLEPFMVADIQCYI 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + ++ + E L S+ + + + +V + + + L+ Y +L L Sbjct: 64 GRSLDI-IQQAESLGSYGSDITADYASYTAASVMVETADKVTDDDGSLQQYLLLVGALRS 122 Query: 121 HKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + L L G+ C VTG + GG V V P Sbjct: 123 LARREHNPSLTLDSYLLRSLSIAGWAPSFVDCAVTGAPGPHSVFVAQMGGVVSDEVAPPG 182 Query: 180 AEK 182 A + Sbjct: 183 APR 185 >gi|145595959|ref|YP_001160256.1| DNA repair protein RecO [Salinispora tropica CNB-440] gi|145305296|gb|ABP55878.1| DNA repair protein RecO [Salinispora tropica CNB-440] Length = 279 Score = 85.6 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 67/183 (36%), Gaps = 10/183 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++DDA++L V+ GE + I+ ++TR++GR R + R L+ V + Sbjct: 9 YRDDAVVLRVQKLGESDRIITLLTRRHGRLRAVARGVRRTTSRFGARLEPFGHVDLQLAG 68 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + G + E ++ + +LL ++ L E L Sbjct: 69 DPKGHQGSSLHTVSQVEGIDLYGKRLLGDYPRYTAASAVCETAERLTPVEREPSLRLFQL 128 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + S + ++ LL+ + G+ L C V G S +GGAVC Sbjct: 129 TLGALRALASGEHAATLVLDAYLLRGMALAGWAPALAGCAVCGTPGRHRAFSVPAGGAVC 188 Query: 173 RSV 175 Sbjct: 189 LDC 191 >gi|302869287|ref|YP_003837924.1| DNA repair protein RecO [Micromonospora aurantiaca ATCC 27029] gi|315504238|ref|YP_004083125.1| DNA repair protein reco [Micromonospora sp. L5] gi|302572146|gb|ADL48348.1| DNA repair protein RecO [Micromonospora aurantiaca ATCC 27029] gi|315410857|gb|ADU08974.1| DNA repair protein RecO [Micromonospora sp. L5] Length = 290 Score = 85.6 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 64/183 (34%), Gaps = 10/183 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++DDA++L V+ GE + I+ + TR++GR R + R L+ V + Sbjct: 9 YRDDAVVLRVQKLGESDRIITLFTRRHGRLRAVARGVRRTTSRFGARLEPFGHVDLQLAG 68 Query: 61 RLAQNLG-----EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 N G + E +E + + L +I L E L Sbjct: 69 DPKGNQGSSLHTVSQVEAIELYGKRFLGDYPRYTAASAIAETAERLTPVEREPSLRLFQL 128 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + + ++ LL+ + G+ L C V G S +GGAVC Sbjct: 129 TLGAMKSLARGEHATTLVLDAYLLRGMAFAGWAPALAACAVCGEPGRHRAFSVPAGGAVC 188 Query: 173 RSV 175 Sbjct: 189 PDC 191 >gi|326791153|ref|YP_004308974.1| DNA repair protein RecO [Clostridium lentocellum DSM 5427] gi|326541917|gb|ADZ83776.1| DNA repair protein RecO [Clostridium lentocellum DSM 5427] Length = 252 Score = 85.6 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 34/257 (13%), Positives = 73/257 (28%), Gaps = 23/257 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + A+++ GE + + + T+ GR + V ++ Sbjct: 1 MMVRTKALVIKEYIVGESDKYITLFTKDLGRIQAIAPKAKKSDKGFASATQLFVYGDFML 60 Query: 61 RL-AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 +++E S Y + ++ EL + + L Sbjct: 61 TSYKDTYRLVSVDLIEMFHNIRNDLSALSYASYMMEFIYYVTEPGLSQSELLKLTLVTLQ 120 Query: 120 CH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA-----VCR 173 K + +I E+ L +GF L CV G+ D + A VC+ Sbjct: 121 ALSKSEADYKRIRRVFEIRALGLLGFMPQLFACVDCGLAIDEKAEAHYYFSAEAGGLVCK 180 Query: 174 SVGLPYAEKM-----------LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNI 222 Y + + +L L + ++ ++ Sbjct: 181 GCKGTYEDGVSLSYSTLYTLQYILTVSLKQLYHFQISEEVQKELDAVG-----NHYVPYY 235 Query: 223 IHCHLLRENFLGKLLEL 239 + +F+ +L +L Sbjct: 236 VDKPFKTLDFIERLEKL 252 >gi|46205206|ref|ZP_00048866.2| COG1381: Recombinational DNA repair protein (RecF pathway) [Magnetospirillum magnetotacticum MS-1] Length = 194 Score = 85.6 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 64/184 (34%), Gaps = 6/184 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++DDAI+L + GE + I+ ++TR++G+ + + S R L+ LV V + Sbjct: 4 YRDDAIVLRAQKLGEADRIVTLLTREHGKVRAVGKGVRRTSSRFGARLEPFMLVDVQLYA 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + + + ++ ++ L E + + Sbjct: 64 GRSLDTVTQAET-IGPYARRICEDYGLYTAGAVMLETAERLVADEREPAVQQYWLLAGAL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + ++ LL+ + G+ C G + GGAVC Sbjct: 123 RALSEHAHAPGLVLDSYLLRALAVAGWAPSFVDCARCGEPGPHHAFAVAQGGAVCSRCRP 182 Query: 178 PYAE 181 P + Sbjct: 183 PGST 186 >gi|332670837|ref|YP_004453845.1| DNA repair protein RecO [Cellulomonas fimi ATCC 484] gi|332339875|gb|AEE46458.1| DNA repair protein RecO [Cellulomonas fimi ATCC 484] Length = 243 Score = 85.6 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 64/179 (35%), Gaps = 8/179 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+AI+L GE + I+ ++TR +G+ + + S R L+ V V + Sbjct: 4 YRDEAIVLRTHKLGEADRIVTLLTRSHGKVRAVGKGVRRTSSRFGSRLEPFMHVDVQLST 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCL-ELYDMLNIFLN 119 + ++ + +L+ G + R + + Y +L + Sbjct: 64 GRSLDIVTQAETLGAYGRPVCEDYTLYTAGTVMLETAERLVEAEHEPALQQYWLLVGAVR 123 Query: 120 CHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + ++ LL+ + G+ T C G + SGGAVC Sbjct: 124 ALAGREHAPGLV--LDSYLLRALAVAGWAPSFTDCARCGEPGPHQAFAVASGGAVCGEC 180 >gi|170725606|ref|YP_001759632.1| DNA repair protein RecO [Shewanella woodyi ATCC 51908] gi|169810953|gb|ACA85537.1| DNA repair protein RecO [Shewanella woodyi ATCC 51908] Length = 228 Score = 85.2 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 68/229 (29%), Gaps = 13/229 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWRSRLAQ 64 +L R + + ++++ ++ GR R ++ ILQ + R Sbjct: 3 RGYVLHTRPFTDSSVLVNMLVDGQGRVDCVARLGSGKTSIKSILQPFQPLIFELSGRSNL 62 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 V + A +S + G + R + E++ + + L Sbjct: 63 KN---LIRVESASPAVPISGEVSFAGFYLNELMVRCISVDHGAEEIFFVYHKTLMAMAAG 119 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 ++ EL LLK IG L + + + ++G + Sbjct: 120 FCQSQLR-YFELSLLKEIGLMPTLNVDIAQDAIEADYYYRLLPDEGFVNALGPKTSH--Y 176 Query: 185 VLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 L E T+ A+ K A L + L + R F Sbjct: 177 SGEMLLSLESHTLQAEHFKQAKH-----LMRLLLAPCLGDKPLKSRALF 220 >gi|159899227|ref|YP_001545474.1| DNA repair protein RecO [Herpetosiphon aurantiacus ATCC 23779] gi|238687077|sp|A9B168|RECO_HERA2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|159892266|gb|ABX05346.1| DNA repair protein RecO [Herpetosiphon aurantiacus ATCC 23779] Length = 253 Score = 85.2 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 57/180 (31%), Gaps = 8/180 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 + +A+I+ GE + IL + T +G+ R + ++ L+ R+ + Sbjct: 6 YTTEALIIRRSDVGEADRILTIYTPHHGKLSVTARGVRKMTSKLAGHLELFIHTRLQL-A 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY---DMLNIF 117 + V++ + S G L + P+ L+ Sbjct: 65 KGRSFDVVTESRVVQPFRSLREDLSRISQGYYVAELLDQMTPDESDNPALFRLTCETLAA 124 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT--QDLLWVSPKSGGAVCRSV 175 L+ I EL L G+ L C D SP +GG +C+ Sbjct: 125 LDVLDDVVRRDVILRYYELHTLILSGYRPHLFDCANCERELSPDADRYSPITGGVLCQQC 184 >gi|85709082|ref|ZP_01040148.1| DNA repair protein RecO [Erythrobacter sp. NAP1] gi|85690616|gb|EAQ30619.1| DNA repair protein RecO [Erythrobacter sp. NAP1] Length = 200 Score = 85.2 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 59/148 (39%), Gaps = 3/148 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M AI++ R++GE +I +MT ++G +V G+ +++P++ GN + RS Sbjct: 1 MNISVPAILVAARAHGETAVIARLMTEEHGLVAAYVAGGRGRQLRPVVIPGNSLEAEIRS 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + L R E+ S + + LPER P L+ L Sbjct: 61 KSDSQLPFARIELAVSRAPWMTEPLPAAAIGWACALTASTLPERNPYPSLFSAFEALLEA 120 Query: 121 HKIPSV---IGKIFVQIELMLLKNIGFG 145 V E MLL+ +G+G Sbjct: 121 ICHAPSARGWLAAMVAYEAMLLRELGYG 148 >gi|76787396|ref|YP_328746.1| DNA repair protein RecO [Streptococcus agalactiae A909] gi|92087036|sp|Q3K407|RECO_STRA1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|76562453|gb|ABA45037.1| DNA repair protein RecO [Streptococcus agalactiae A909] Length = 253 Score = 85.2 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 63/197 (31%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 Q ++L R+Y E + ++++ T G+ + FV++ + +LQ + + Sbjct: 5 QTYGLVLYNRNYREDDKLVKIFTETEGKRMFFVKHASKSKFNAVLQPLTIAHFILKINDN 64 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ + + Y + + +L+ L L + Sbjct: 65 GLSYIDDYKEVLAFQEINSDLFKLSYASYITSLADVAISDNVADAQLFIFLKKTLELIED 124 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ LL+ G L+ CV S K G +C + + Sbjct: 125 GLDYEILTNIFEVQLLERFGVALNFHDCVFCHRAGLPFDFSHKYSGLLCPNHYYKDERRN 184 Query: 184 LVLPSFLWKEEQTIDAD 200 + P+ L + Sbjct: 185 HLDPNMLHLINRFQSIQ 201 >gi|167630515|ref|YP_001681014.1| DNA repair protein reco [Heliobacterium modesticaldum Ice1] gi|238687862|sp|B0TAF3|RECO_HELMI RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|167593255|gb|ABZ85003.1| DNA repair protein reco [Heliobacterium modesticaldum Ice1] Length = 273 Score = 85.2 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 56/156 (35%), Gaps = 2/156 (1%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M ++ A++L RSYGE + +L ++TR+ G+ + + + L Sbjct: 1 MRLYRAQALVLRSRSYGEADRLLTLLTRERGKLSAIAKGVRKPTSRLRAGTQPLTHSQLV 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 +NL A L + S+ L L +L+ +L + Sbjct: 61 LYEGKNLQTVTQAEPVESFAALHGDVVRFSHASSMAELVDRLSPDHSGADLFPLLLTGWH 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + +L LL +G+ +L+ C+ G Sbjct: 121 LLS-VFPGDLVACLFQLRLLDRLGYCPELSLCLDCG 155 >gi|226360360|ref|YP_002778138.1| DNA repair protein RecO [Rhodococcus opacus B4] gi|254764656|sp|C1AUI5|RECO_RHOOB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226238845|dbj|BAH49193.1| DNA repair protein RecO [Rhodococcus opacus B4] Length = 271 Score = 85.2 bits (209), Expect = 7e-15, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 61/184 (33%), Gaps = 7/184 (3%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN 57 M ++D+A++L GE + I+ ++TRQ+G + + + + L+ + V Sbjct: 1 MRLYRDNAVVLRQHKLGEADRIVTLLTRQHGLVRAVAKGVRRTKSKFGARLEPFAHIDVQ 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + +++ ++ +I+ L E L Sbjct: 61 LYP-GRNLDIVTQVQTVDAFATDIVDDYTRYTTACAILETAERLAGEERAPALQLHRLTV 119 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGF---GLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + + ++ LL+ +GF L C +GGAVC Sbjct: 120 GALRAVAEHHRPCELILDAFLLRAMGFAGWAPALDDCARCSAPGPHRAFHVAAGGAVCVQ 179 Query: 175 VGLP 178 P Sbjct: 180 CRPP 183 >gi|119716162|ref|YP_923127.1| DNA repair protein RecO [Nocardioides sp. JS614] gi|171704605|sp|A1SI05|RECO_NOCSJ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119536823|gb|ABL81440.1| DNA replication and repair protein RecO [Nocardioides sp. JS614] Length = 244 Score = 85.2 bits (209), Expect = 7e-15, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 53/160 (33%), Gaps = 6/160 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M ++D+AI+L GE + I+ ++TRQ GR + + R L+ V + Sbjct: 1 MLYRDEAIVLRTHKLGEADRIVTLLTRQRGRVRAVAKGVRRTTSRFGSRLEPFTHVDLQL 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + + L + G + R L E + L + Sbjct: 61 AEGRNLDTITQAETLTPFSKGLGLDYDRYTAGTVMLETADR-LVAEEREPSVQQFLLLVG 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTG 155 + + ++ LL+++ G+ C G Sbjct: 120 GLRAMVAGEHAPGQVLDSYLLRSLAVAGYAPSFEHCARCG 159 >gi|227543023|ref|ZP_03973072.1| DNA repair protein RecO [Corynebacterium glucuronolyticum ATCC 51866] gi|227181245|gb|EEI62217.1| DNA repair protein RecO [Corynebacterium glucuronolyticum ATCC 51866] Length = 241 Score = 85.2 bits (209), Expect = 7e-15, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 61/180 (33%), Gaps = 4/180 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 +++ A+I+ +GE + I+ +TR G G + + R LQ + V + Sbjct: 6 YRERAVIVRTYDFGEADRIVVFLTRTRGIVRGVAKGVRRANSRFGSRLQPFVELDVQFYK 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + +L+ +++ + +YD + L Sbjct: 66 GRNLES--VTEADAVTFFGRLIDDYPRYTAASTVLETAEKVSLGAESEGVYDRVLNALAE 123 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V+ + L ++ ++G+ L C G +GGA+C LP + Sbjct: 124 LNETGVVTPVLDAFLLHIMSDVGWPPSLFDCAQCGAPGPHEVFHAGAGGALCERCRLPGS 183 >gi|312140282|ref|YP_004007618.1| DNA repair protein reco [Rhodococcus equi 103S] gi|311889621|emb|CBH48938.1| DNA repair protein RecO [Rhodococcus equi 103S] Length = 271 Score = 85.2 bits (209), Expect = 7e-15, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 61/184 (33%), Gaps = 7/184 (3%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN 57 M ++D A++L GE + I+ ++TRQ+G + + + + L+ + V Sbjct: 1 MRLYRDYAVVLRQHKLGEADRIVTLLTRQHGLVRAVAKGVRRTKSKFGARLEPFAHIDVQ 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + +++ A ++ +I+ L E Sbjct: 61 LHP-GRNLDIVTQVSTVDAFGADIVDDYGRYTTACAILETAERLAGEEKAPVPRLHSLTV 119 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGF---GLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + + + ++ LL+ +G+ LT C +GGAVC Sbjct: 120 GALRAVGDRTRPVELILDAYLLRAMGYAGWAPALTDCARCAAPGPHRAFHVAAGGAVCVH 179 Query: 175 VGLP 178 P Sbjct: 180 CRPP 183 >gi|300780721|ref|ZP_07090575.1| recombination protein O [Corynebacterium genitalium ATCC 33030] gi|300532428|gb|EFK53489.1| recombination protein O [Corynebacterium genitalium ATCC 33030] Length = 245 Score = 85.2 bits (209), Expect = 7e-15, Method: Composition-based stats. Identities = 25/178 (14%), Positives = 55/178 (30%), Gaps = 2/178 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D A ++ +GE + ++ ++T+ +G + + + + +Q + V Sbjct: 7 FRDRAFVVRTYDFGEADRVVVLLTQNHGLVRSVAKGVRKTKSRFGSRVQPFVDLDVQLYP 66 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 V + + + R E L+ ++ + Sbjct: 67 GRNLATITQADTVAYYGSGIIEDFDRYTAACAVLESAERLSYAGEADPALFAEVSTAIKR 126 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + L + G+GL L C G P GGA C + P Sbjct: 127 LQDAQQATMVLDAFILRAAAHAGWGLSLFDCANCGKPGPHHAFHPALGGATCLNCRPP 184 >gi|331701381|ref|YP_004398340.1| DNA repair protein recO [Lactobacillus buchneri NRRL B-30929] gi|329128724|gb|AEB73277.1| DNA repair protein recO [Lactobacillus buchneri NRRL B-30929] Length = 253 Score = 85.2 bits (209), Expect = 7e-15, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 60/171 (35%), Gaps = 2/171 (1%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSRLAQ 64 I+L ++Y E +++++ +TR++G+ + VR + +M+ + + + Sbjct: 11 GILLYTKAYREHDLLIKFLTREFGKKMFLVRGAKRPRFKMRSAILPFTYGLYGGDIKESG 70 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + L + Y + + P+ EP YD L L Sbjct: 71 LSYILNDKQLVHFQNISEDITKNAYATYIMSLIDMAYPDGEPIATWYDKLLTGLQLIDQG 130 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 I E+ LL G + C + T S GG +C++ Sbjct: 131 FDEQIITNIFEVQLLNAYGVAPNWVDCTICHRTDLPFDYSEAYGGLLCQNH 181 >gi|172041007|ref|YP_001800721.1| DNA repair protein RecO [Corynebacterium urealyticum DSM 7109] gi|171852311|emb|CAQ05287.1| DNA repair protein RecO [Corynebacterium urealyticum DSM 7109] Length = 252 Score = 85.2 bits (209), Expect = 7e-15, Method: Composition-based stats. Identities = 28/187 (14%), Positives = 57/187 (30%), Gaps = 8/187 (4%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR 59 ++D+A +L GE ++IL ++TR +G + + + + L + V V Sbjct: 9 NFRDEAFVLRSYKLGEADLILVLLTRSHGVVRAVAKGIRKTKSRFGARLDRFSKVNVQVY 68 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + + + G + ++ L+ L Sbjct: 69 RGRSLGKITDTASLASYAGPIVADVDKYFAGAAMLELAQILSTAEGSSEAVFSSLDAGLA 128 Query: 120 CHKIPS------VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 + + L L G+ L C G P++GG+VC Sbjct: 129 LLAGTDPATPELPPVSVADRFVLHGLAEAGWMPSLVDCAQCGRPGPHRAFHPRAGGSVCV 188 Query: 174 SVGLPYA 180 P + Sbjct: 189 LCRPPGS 195 >gi|84496823|ref|ZP_00995677.1| DNA repair protein RecO [Janibacter sp. HTCC2649] gi|84383591|gb|EAP99472.1| DNA repair protein RecO [Janibacter sp. HTCC2649] Length = 241 Score = 85.2 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 78/234 (33%), Gaps = 12/234 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D I+L GE + I+ V+TR G+ + + + + L+ G LV + Sbjct: 4 YRDQGIVLRTHKLGEADRIITVLTRGLGKVRTVGKGVRRTKSRFGARLEPGMLVDLQCYE 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + ++ + R EREP L+ Y ++ + Sbjct: 64 GRNLDTVTQAETLESWGDVISRDYDVWTAASAVLETCDRLTEEREPALQQYLLVTGAMRS 123 Query: 121 HKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV---- 175 + L L G+ C G SGGAVC S Sbjct: 124 LAGKEHDPNLVLDAYLLRALAIAGWAPSFHDCAKCGAEGPHRAFHIVSGGAVCSSCRPPG 183 Query: 176 -GLPYAEKMLVLPSFLWKEEQTIDADSL---KSAFQLTDYFLNKYALQHNIIHC 225 P E + +L + L + DA L + LT FL + L+H + Sbjct: 184 SAAPAPETLRLLAALLAGDWFIADASDLRHRREGSGLTTAFLQ-WHLEHGVRSL 236 >gi|24378553|ref|NP_720508.1| DNA repair protein RecO [Streptococcus mutans UA159] gi|42559475|sp|Q8DWM0|RECO_STRMU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|24376403|gb|AAN57814.1|AE014855_4 putative DNA repair protein RecO [Streptococcus mutans UA159] Length = 251 Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 68/202 (33%), Gaps = 2/202 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + ++L R + E + ++++ T G+H+ FVR+ + ++ ++Q L + Sbjct: 5 ETRGLVLYNRPFREDDKLVKIFTETSGKHMFFVRHATNSKLSSVIQPLILANFILKINNH 64 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ + Y + + + L+ L L Sbjct: 65 GLSYIEDYKGVSLFKEINADIYKLAYATYLVSLADAAISDAVYDAPLFAFLIKTLELMDE 124 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ CV S + G +C + Sbjct: 125 GLDYEILTNIFEIQILDRFGVQLNFHDCVFCHRVGLAFDFSHRYSGLLCPEHYEKDLYRS 184 Query: 184 LVLP--SFLWKEEQTIDADSLK 203 + P +L + QT+ DSLK Sbjct: 185 HLDPNVPYLLNQFQTLHFDSLK 206 >gi|57234637|ref|YP_181322.1| recombination protein RecO [Dehalococcoides ethenogenes 195] gi|92087027|sp|Q3Z8X7|RECO_DEHE1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|57225085|gb|AAW40142.1| recombination protein RecO [Dehalococcoides ethenogenes 195] Length = 253 Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 55/157 (35%), Gaps = 3/157 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++ AII+ GE + IL ++T G GF ++ + + + L+ V+ + Sbjct: 7 FKTRAIIVRKTKCGEADRILSLLTPDLGLIQGFAKSVRKTKSKLSGHLELFCYSEVSL-A 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R + ++S S L F F PE ++ +L L Sbjct: 66 RGKAIDTVTGSQTIQSFLNIRSSLQLSAMAFYVCELAFHFSPEESANPAIFQLLLSTLEE 125 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + E+ LL+ G+ +L +C Sbjct: 126 LDNTTQAELCTKYFEIHLLEMSGYKPELRECANCHQK 162 >gi|227432224|ref|ZP_03914220.1| recombination protein O [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351997|gb|EEJ42227.1| recombination protein O [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 259 Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 69/237 (29%), Gaps = 17/237 (7%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS----R 61 I+L R Y + ++++ ++T YG R + + V + R Sbjct: 5 RGIVLYTRQYKDNDLLVRILTETYGMRTFLARGAKKATSKLSAGTQPYTIVTFDGALPKR 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + ++ + + Y + E E Y+ L + L Sbjct: 65 ETGLGYMNDVQDIKVYSRLIEDIEANAYAALIASLIDASFEEGEKITRWYNQLYVALQKL 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I E+ LL +G +L +TG S K G + + + Sbjct: 125 DEGLDPQIIANIFEIQLLVPLGVAPNLRADPITGQVDGKFDYSEKYNGIISENHFNLDDQ 184 Query: 182 KMLVLPS--FLWKEEQTIDADSLKS---------AFQLTDYFL-NKYA-LQHNIIHC 225 ++++ F ++ ID + Q ++ K L+ Sbjct: 185 RLMLDQKTVFYLRQFSVIDMRQVHDIKMSAITKRGLQRVIDYIYEKQVGLKPRAKSF 241 >gi|296875493|ref|ZP_06899566.1| recombination protein O [Streptococcus parasanguinis ATCC 15912] gi|296433560|gb|EFH19334.1| recombination protein O [Streptococcus parasanguinis ATCC 15912] Length = 259 Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 27/188 (14%), Positives = 62/188 (32%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 + I+L R + E + ++++ T + G+ + FV + R+ +LQ + + Sbjct: 5 IETRGIVLYNREFREDDKLVKIFTEKSGKRMFFVNHAGKSRLNSMLQPLVTADMLLKIND 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 F+ ++ + Y + + + + L+ L L + Sbjct: 65 DGLSYIDDFQDVQVYKKINADLFALSYATYVLALADASIHDNQVDPALFAFLEKTLLLME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + E+ +L G L+L +C S + G +C + Sbjct: 125 EGLDYEVLTNIFEIQILSRFGVILNLHECCFCHRVGLPFDYSFRYSGVLCPDHYDRDERR 184 Query: 183 MLVLPSFL 190 P+ L Sbjct: 185 AHWHPNVL 192 >gi|296112102|ref|YP_003622484.1| DNA repair protein RecO [Leuconostoc kimchii IMSNU 11154] gi|295833634|gb|ADG41515.1| DNA repair protein RecO [Leuconostoc kimchii IMSNU 11154] Length = 263 Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 32/249 (12%), Positives = 74/249 (29%), Gaps = 17/249 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVN--WRSRL 62 ++L R Y + ++++ ++T G R + + Q LV + R Sbjct: 6 GVVLYTRQYKDNDLLVRILTETGGLRTFLARGAKRPKSHLSAATQPYTLVIFEGAFPKRN 65 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + ++ + Y + L E +P Y+ L + L Sbjct: 66 QGLGYINDIQHITNYPRLMDDIEANAYAALIVSLLDEIFEEGDPLTRWYNQLVLALQKLN 125 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 I E+ LL +G + ++G + S K G + + + Sbjct: 126 EGLDPQIIANIFEIQLLVPLGVAPNWRVDPISGQSDGRFDYSEKYNGIISEAHYELDDHR 185 Query: 183 MLVLPS--FLWKEEQTIDADSLKS---------AFQLTDYFL-NKYA-LQHNIIHCHLLR 229 +++ F ++ ID + Q ++ + L+ Sbjct: 186 LMLDQKTMFYLRQFSVIDLRQINQISVSNTTKRGLQRVIDYIYERQVGLKPRAKTFIEQM 245 Query: 230 ENFLGKLLE 238 + L + Sbjct: 246 HLWQNTLKQ 254 >gi|119026173|ref|YP_910018.1| DNA repair protein RecO [Bifidobacterium adolescentis ATCC 15703] gi|166221885|sp|A1A2K3|RECO_BIFAA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|118765757|dbj|BAF39936.1| DNA repair protein recO [Bifidobacterium adolescentis ATCC 15703] Length = 246 Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 55/158 (34%), Gaps = 6/158 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 +QD+ ++L GE + IL ++TR +G+ + + + + L+ V + Sbjct: 4 YQDEGVVLRTAKLGEADRILTLLTRDHGKVRAVAKGVRRTKSRFGGRLEPFMRVALLIAE 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDMLNIFL 118 + ++ + ++ + + I L E + Y ++ L Sbjct: 64 GRSLDVVSQAES-IAAYAGPICADFQAYTAANVICETADKLVATEKEPAVAQYRLVLGAL 122 Query: 119 NCHKIPSVIG-KIFVQIELMLLKNIGFGLDLTKCVVTG 155 N + I L L G+ L CVV G Sbjct: 123 NALAKHAHEPSTIGDSYVLRALAIAGWTPRLRVCVVCG 160 >gi|171742448|ref|ZP_02918255.1| hypothetical protein BIFDEN_01560 [Bifidobacterium dentium ATCC 27678] gi|283456466|ref|YP_003361030.1| DNA repair protein RecO [Bifidobacterium dentium Bd1] gi|306822358|ref|ZP_07455737.1| recombination protein O [Bifidobacterium dentium ATCC 27679] gi|309802175|ref|ZP_07696284.1| DNA repair protein RecO [Bifidobacterium dentium JCVIHMP022] gi|171278062|gb|EDT45723.1| hypothetical protein BIFDEN_01560 [Bifidobacterium dentium ATCC 27678] gi|283103100|gb|ADB10206.1| DNA repair protein RecO [Bifidobacterium dentium Bd1] gi|304554356|gb|EFM42264.1| recombination protein O [Bifidobacterium dentium ATCC 27679] gi|308221255|gb|EFO77558.1| DNA repair protein RecO [Bifidobacterium dentium JCVIHMP022] Length = 242 Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 52/163 (31%), Gaps = 8/163 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 +QD+ ++L GE + I+ ++TR +G+ + + + + L+ V V + Sbjct: 4 YQDEGVVLRTAKLGEADRIITLLTRDHGKIRAVAKGVRRTKSRFGGRLEPFMRVDV-LVA 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + E + ++ + + I L E + + L Sbjct: 63 EGRSLDVISQAESISAYAGPICADYGAYAAANVIAETADKLVAGE-HERMTMQYRLVLGA 121 Query: 121 HK----IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 I + L G+ L CVV G D Sbjct: 122 LNALAKHAHDSNAIGDSYVMRALALAGWTPRLRACVVCGDPID 164 >gi|169334056|ref|ZP_02861249.1| hypothetical protein ANASTE_00449 [Anaerofustis stercorihominis DSM 17244] gi|169258773|gb|EDS72739.1| hypothetical protein ANASTE_00449 [Anaerofustis stercorihominis DSM 17244] Length = 253 Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 70/210 (33%), Gaps = 6/210 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + I+L + E + IL V T++ G+ +N S + + I Q + Sbjct: 1 MIREFHGIVLKNIKFSENDRILTVFTKERGKISVMAKNAASKKSKVIAQTSTFSYSYFCL 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 +N + L + L I L E + + L I++ Sbjct: 61 YPGKNFYTLKSADYIKSFPGLQTDLERLSFASYISELVDIFYEDKMEEPITFNLIIYILD 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFG---LDLTKCVVTGVTQDLLWV-SPKSGGAVCRSVG 176 + K+ +LK +G D + C + T D ++ SG +C Sbjct: 121 LLQKEKLEKLSFITLAFMLKLLGISGIIPDFSGCSICSATNDEYYILDFDSGSILCSKCT 180 Query: 177 LPYAEKMLVLPSF--LWKEEQTIDADSLKS 204 + + + L + ++ + +K+ Sbjct: 181 MKHFSMNKITSKQLDLINKLTYVNVNDIKN 210 >gi|227488411|ref|ZP_03918727.1| DNA repair protein RecO [Corynebacterium glucuronolyticum ATCC 51867] gi|227091625|gb|EEI26937.1| DNA repair protein RecO [Corynebacterium glucuronolyticum ATCC 51867] Length = 241 Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats. Identities = 30/180 (16%), Positives = 62/180 (34%), Gaps = 4/180 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 +++ A+I+ +GE + I+ +TR G G + + R LQ + V + Sbjct: 6 YRERAVIVRTYDFGEADRIVVFLTRTRGIVRGVAKGVRRANSRFGSRLQPFVELDVQFYK 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 V + +L+ +++ + +YD + L Sbjct: 66 GRNLESVTGADTV--TFFGRLIDDYPRYTAASTVLETAEKVSLGAESEGVYDRVLNALAE 123 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 V+ + L ++ ++G+ L C G +GGA+C LP + Sbjct: 124 LNETGVVTPVLDAFLLHIMSDVGWPPSLFDCAQCGAPGPHEVFHAGAGGALCERCRLPGS 183 >gi|294507177|ref|YP_003571235.1| DNA repair protein recO [Salinibacter ruber M8] gi|294343505|emb|CBH24283.1| DNA repair protein recO [Salinibacter ruber M8] Length = 314 Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 59/153 (38%), Gaps = 4/153 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 + A++L YGE + I+ + T++ G+ + + + LQ +V + Sbjct: 60 IVRTKAVVLRSIDYGETSQIVTLFTQEKGKLGVMAKGARRPKSSFGATLQPMAYTQVVFY 119 Query: 60 SRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + ++ L ++S GL+ + + + E +P + ++ L Sbjct: 120 HKPSRTLQTLSESSHVQSFHRLREKLPTITVGLRIVELVDALMEEEDPQPAAFALVVRAL 179 Query: 119 NCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTK 150 + I + ++ ++L L + +G + + Sbjct: 180 HRLNIAEARVSNLWPYVQLQLAQILGVAPAVDR 212 >gi|83816235|ref|YP_445302.1| DNA repair protein RecO [Salinibacter ruber DSM 13855] gi|119361484|sp|Q2S3C9|RECO_SALRD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|83757629|gb|ABC45742.1| DNA repair protein RecO [Salinibacter ruber DSM 13855] Length = 260 Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 59/153 (38%), Gaps = 4/153 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 + A++L YGE + I+ + T++ G+ + + + LQ +V + Sbjct: 6 IVRTKAVVLRSIDYGETSQIVTLFTQEKGKLGVMAKGARRPKSSFGATLQPMAYTQVVFY 65 Query: 60 SRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + ++ L ++S GL+ + + + E +P + ++ L Sbjct: 66 HKPSRTLQTLSESSHVQSFHRLREKLPTITVGLRIVELVDALMEEEDPQPAAFALVVRAL 125 Query: 119 NCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTK 150 + I + ++ ++L L + +G + + Sbjct: 126 HRLNIAEARVSNLWPYVQLQLAQILGVAPAVDR 158 >gi|296120992|ref|YP_003628770.1| DNA repair protein RecO [Planctomyces limnophilus DSM 3776] gi|296013332|gb|ADG66571.1| DNA repair protein RecO [Planctomyces limnophilus DSM 3776] Length = 249 Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 58/155 (37%), Gaps = 3/155 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + A+IL V + E + I+ + +R++GR + G+ + + L + V + + Sbjct: 5 KGTALILRVTDFSETSRIVVMFSREHGRFSALAKGGRRLKGPFESSLDLLSTCDVVFLKK 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLNIFLNC 120 + L L + LY + L L E P E+YD L Sbjct: 65 ASSGLDLLTEARLVHRFRPEPNQLNALYAGYYVAELILGLTEDYDPHPEIYDEAQKLLES 124 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 S + + EL++L+ G D C+ G Sbjct: 125 LADASNLAIKLTRFELIMLRECGQLPDFETCMACG 159 >gi|157374289|ref|YP_001472889.1| DNA repair protein RecO [Shewanella sediminis HAW-EB3] gi|157316663|gb|ABV35761.1| DNA repair protein RecO [Shewanella sediminis HAW-EB3] Length = 226 Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats. Identities = 36/229 (15%), Positives = 64/229 (27%), Gaps = 13/229 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWRSRLAQ 64 +L R + + ++++ ++ GR R ++ ILQ + R + Sbjct: 3 RGYVLHTRPFRDSSVLVNMLVDGQGRVDCVARLGSGKSSIKSILQPFQPLIFELSGRSSL 62 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 +V + A LS + G L R L+ + L Sbjct: 63 KN---LSQVEAASPAIPLSGEVSFSGFYLNELLVRCTSVDHGGEALFFTYHRTLMAMAAG 119 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 ++ EL LLK IG LT + + + ++G Sbjct: 120 FCQSQLR-YFELELLKEIGLMPTLTVDISQDAIEADYYYRLLPDEGFVSALGPKTTH--Y 176 Query: 185 VLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 L E + K A L + L + R F Sbjct: 177 SGEMLLALNEHKLLPAHFKQAKH-----LMRLMLGPCLGDKPLKSRALF 220 >gi|111018235|ref|YP_701207.1| DNA repair protein RecO [Rhodococcus jostii RHA1] gi|119361482|sp|Q0SHD7|RECO_RHOSR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|110817765|gb|ABG93049.1| probable DNA repair protein RecO [Rhodococcus jostii RHA1] Length = 271 Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 67/216 (31%), Gaps = 10/216 (4%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN 57 M ++D+A++L GE + I+ ++TRQ+G + + + + L+ + V Sbjct: 1 MRLYRDNAVVLRQHKLGEADRIVTLLTRQHGLVRAVAKGVRRTKSKFGARLEPFAHIDVQ 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + +++ ++ +I+ L E Sbjct: 61 LYP-GRNLDIVTQVQTVDAFATDIVDDYSRYTTACAILETAERLAGEERAPAPQLHRLTV 119 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGF---GLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + + ++ LL+ +GF L C +GGAVC Sbjct: 120 GALRAVAEHNRPCELILDAFLLRAMGFAGWAPALDDCARCSAPGPHRAFHVAAGGAVCVH 179 Query: 175 VGLPYAEKMLVLPSFLWKEEQTIDA---DSLKSAFQ 207 P A L D + + + + Sbjct: 180 CRPPGAATPSPGVLDLMDALIRGDWASTEDVPESLR 215 >gi|91789483|ref|YP_550435.1| DNA repair protein RecO [Polaromonas sp. JS666] gi|119361471|sp|Q126K5|RECO_POLSJ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|91698708|gb|ABE45537.1| DNA repair protein RecO [Polaromonas sp. JS666] Length = 249 Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 52/150 (34%), Gaps = 7/150 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSR 61 + A +L + E ++ILE+ TRQYGR R + +PIL + + + Sbjct: 8 DEPAYVLHRYDWSESSLILEIFTRQYGRVALVARGAKKPSSSFRPILLPLQPLHIAF--- 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + L G L R L +P L+D + + Sbjct: 65 GGDAEIRTLKSAEWQGGHVMPTGDALLSGYYLNELLMRLLARDDPHPVLFDAYSATVQLL 124 Query: 122 KIPSVI--GKIFVQIELMLLKNIGFGLDLT 149 SV EL LL++IG L Sbjct: 125 ASQSVDTLQLALRAFELRLLRDIGLLPLLD 154 >gi|295394790|ref|ZP_06805005.1| recombination protein O [Brevibacterium mcbrellneri ATCC 49030] gi|294972386|gb|EFG48246.1| recombination protein O [Brevibacterium mcbrellneri ATCC 49030] Length = 242 Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 61/203 (30%), Gaps = 4/203 (1%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN 57 M + +D I++G GE ++I+ ++TR +G + + + + L +V Sbjct: 1 MRFYRDTGIVVGHTKLGEADLIVSILTRDHGLVRAVAKGVRRTKSRFGSRLDLFMMVDFQ 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 ++ + + +F + + Y +L+ Sbjct: 61 AHIGRNLDIVTQVELIEPFGHGIVGDYDVFAAAAAMAETAAKLTENEPNTRDQYLLLSAA 120 Query: 118 LNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L ++ L ++ G+ L CV G S SGG VC + Sbjct: 121 LRSLCNREHPPRLALNAYLLRAMRTAGWEPGLDACVSCGAPGPHRAFSFNSGGVVCVACR 180 Query: 177 LPYAEKMLVLPSFLWKEEQTIDA 199 + L + Sbjct: 181 TAADTNAGEDATVLLHNLLNANW 203 >gi|225351488|ref|ZP_03742511.1| hypothetical protein BIFPSEUDO_03083 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157832|gb|EEG71115.1| hypothetical protein BIFPSEUDO_03083 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 242 Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 57/158 (36%), Gaps = 6/158 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 +QD+ ++L GE + I+ ++TR +G+ + + + + L+ V + + Sbjct: 4 YQDEGVVLRTVKLGEADRIVTLLTRDHGKIRAVAKGVRRTKSRFGGRLEPFMRVSL-LIA 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL--PEREPCLELYDMLNIFL 118 + E + ++ + + I L E+E + Y ++ L Sbjct: 63 EGRSLDVISQAESVSAYARGICTDFKAYTAANVICETADKLVVTEQERSVAQYRLVLGAL 122 Query: 119 NCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 N K I + L G+ L CVV G Sbjct: 123 NALSKHAHEAAAIGDSYVMRALAIAGWTPRLRACVVCG 160 >gi|116333399|ref|YP_794926.1| recombinational DNA repair protein (RecF pathway) [Lactobacillus brevis ATCC 367] gi|122269914|sp|Q03SC7|RECO_LACBA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|116098746|gb|ABJ63895.1| DNA replication and repair protein RecO [Lactobacillus brevis ATCC 367] Length = 260 Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 55/172 (31%), Gaps = 2/172 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL--A 63 I+L R Y E++ +++ T+++G+ + VR + + + ++ + Sbjct: 9 HGILLFRRDYAERDFLIKFFTQEFGKKMFLVRGAKKRGFKMVADILPFTVGSYVGDIADD 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 Y + + P+ +P + Y + L Sbjct: 69 GLSYIRTARETRQFQDISADIFKNAYATYIMSLVDTAFPDSQPLPDWYHRVQRALTLIDD 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + +E+ L+ G L C V G S GG +C++ Sbjct: 129 GVNAAIVTNIMEIQLMPAFGVAPQLQGCAVCGRNDLPFDYSESYGGLLCQAH 180 >gi|325677060|ref|ZP_08156730.1| recombination protein O [Rhodococcus equi ATCC 33707] gi|325552131|gb|EGD21823.1| recombination protein O [Rhodococcus equi ATCC 33707] Length = 296 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 28/181 (15%), Positives = 60/181 (33%), Gaps = 6/181 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D A++L GE + I+ ++TRQ+G + + + + L+ + V Sbjct: 29 YRDYAVVLRQHKLGEADRIVTLLTRQHGLVRAVAKGVRRTKSKFGARLEPFAHIDVQLHP 88 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + +++ A ++ +I+ L E Sbjct: 89 -GRNLDIVTQVSTVDAFGADIVDDYGRYTTACAILETAERLAGEEKAPVPRLHSLTVGAL 147 Query: 121 HKIPSVIGKIFVQIELMLLKNIGF---GLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + + ++ LL+ +G+ LT C +GGAVC Sbjct: 148 RAVGDRTRPVELILDAYLLRAMGYAGWAPALTDCARCAAPGPHRAFHVAAGGAVCVHCRP 207 Query: 178 P 178 P Sbjct: 208 P 208 >gi|301064134|ref|ZP_07204581.1| DNA repair protein RecO [delta proteobacterium NaphS2] gi|300441754|gb|EFK06072.1| DNA repair protein RecO [delta proteobacterium NaphS2] Length = 245 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 51/158 (32%), Gaps = 4/158 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M+ ++II +GE ++++ T GR G + + R L + L R+ + Sbjct: 1 MHIS-ESIITRTWEFGETDLLVSFFTVDRGRLKGVAKGARKSTRRFANCLDSFCLTRLEY 59 Query: 59 RSRLAQNLGEFRFEVLESHCA-KLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + ++L L I P ++D+L Sbjct: 60 ERKSGRDLYFLNSGKLIHGFPELRADFHALSLASYMIELTETLFPPGVSEPRMFDLLKDA 119 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 ++ + E L G+G++ +C G Sbjct: 120 FIALSGRIGRDELRIFFEAKALALGGYGINFERCCECG 157 >gi|325130814|gb|EGC53548.1| DNA repair protein RecO [Neisseria meningitidis OX99.30304] Length = 247 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 66/211 (31%), Gaps = 11/211 (5%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L + V +W Sbjct: 12 FLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVSFVPVSASWYGSQELK 71 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 V GL + + +P ELYD L + + Sbjct: 72 TLHRAEWVGGWRQP---QGRALFSGLYVNELVLKLTAREDPMPELYDALAKVMEAVCREA 128 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV----CRSVGLPYAE 181 + E LL +G DL G AV + L + Sbjct: 129 NHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVCEDADALSHEA 188 Query: 182 KMLVLPSFLWK--EEQTIDADSLKSAFQLTD 210 +V L E A+SL+ A ++T Sbjct: 189 GAIVEGQSLIDLREGSFRTAESLQQALKITR 219 >gi|254672798|emb|CBA06905.1| DNA repair protein RecO [Neisseria meningitidis alpha275] Length = 248 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 66/211 (31%), Gaps = 11/211 (5%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L + V +W Sbjct: 13 FLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVSFVPVSASWYGSQELK 72 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 V GL + + +P ELYD L + + Sbjct: 73 TLHRAEWVGGWRQP---QGRALFSGLYVNELVLKLTAREDPMPELYDALAKVMEAVCREA 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV----CRSVGLPYAE 181 + E LL +G DL G AV + L + Sbjct: 130 NHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVCEDADALSHEA 189 Query: 182 KMLVLPSFLWK--EEQTIDADSLKSAFQLTD 210 +V L E A+SL+ A ++T Sbjct: 190 GAIVEGQSLIDLREGSFRTAESLQQALKITR 220 >gi|149186742|ref|ZP_01865053.1| hypothetical protein ED21_29626 [Erythrobacter sp. SD-21] gi|148829650|gb|EDL48090.1| hypothetical protein ED21_29626 [Erythrobacter sp. SD-21] Length = 198 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 3/148 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ + AI+L R +GE +I ++T + G +V G+ +++P++ GNLV R+ Sbjct: 1 MHLRAPAILLAARPHGETAVIARLLTEESGVVAAYVAGGRGRQLRPVVIPGNLVEAEIRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + L R E+ +S L + LPER P LY L L Sbjct: 61 KSDSQLPFARLELAQSRGPWLTEPLPAAAIAWTCALTASALPERNPYPSLYSALAALLEA 120 Query: 121 HKIPSV---IGKIFVQIELMLLKNIGFG 145 E++LL+ +G+G Sbjct: 121 ICNAPSARGWAGALATYEVLLLRELGYG 148 >gi|323359850|ref|YP_004226246.1| recombinational DNA repair protein [Microbacterium testaceum StLB037] gi|323276221|dbj|BAJ76366.1| recombinational DNA repair protein [Microbacterium testaceum StLB037] Length = 242 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 79/206 (38%), Gaps = 4/206 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+ ++L GE + IL +++R+ G+ + + S + L+ + V Sbjct: 4 YRDEVVVLRTHKLGEADRILTLLSRRNGKIRAVAKGVRRTSSKFGSRLEPFMVADVQLF- 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + E L S+ A++++ ++V L E E + Y +L L Sbjct: 63 KGRNLDIVQQAESLGSYGAEIVADYDVYTTASAMVETADRLNEAEATPQQYLLLVGGLRS 122 Query: 121 HKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + L + G+ LT+C G D + + GG VC + Sbjct: 123 LARGEHSERSVLDSYLLRAMALSGWAPGLTECARCGTVGDHPYFLAQLGGVVCSTCAPAG 182 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSA 205 + ++ + + + +++ +A Sbjct: 183 SPRVARDTVDMLRALMAGEWETIDAA 208 >gi|307243730|ref|ZP_07525870.1| DNA repair protein RecO [Peptostreptococcus stomatis DSM 17678] gi|306492939|gb|EFM64952.1| DNA repair protein RecO [Peptostreptococcus stomatis DSM 17678] Length = 248 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 66/178 (37%), Gaps = 3/178 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RSRL 62 I+L Y +K++IL + TR+YG+ + Q + + + + N+ + Sbjct: 5 DTQGIVLRAVKYRDKDLILTIFTRKYGKVSAIAKGAQGQKSRFLSASQLFSYNNYNMRKQ 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 ++ + ++S + F Y I + + E +P L+++L L + Sbjct: 65 KDMFTLYQADNIKSFYNISMDFESFSYASFIIKLVEANIVEGQPNNRLFELLAQTLFLYS 124 Query: 123 IPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVSPKSGGAVCRSVGLP 178 + L + +G+ L +C + G S + GG VC + Sbjct: 125 EKIDNKNLVLDAFLLKFVDYMGYRPQLDRCTICGNKNLKYAVFSVEDGGLVCNNCHKK 182 >gi|315640638|ref|ZP_07895744.1| recombination protein O [Enterococcus italicus DSM 15952] gi|315483666|gb|EFU74156.1| recombination protein O [Enterococcus italicus DSM 15952] Length = 257 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 58/191 (30%), Gaps = 2/191 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 + +IL +++ EK+ ++++ T G+ + +VR QP + + Sbjct: 3 IVESKGLILFAKNHKEKDKLVKIFTESAGKQMFYVRGAHRKNNPLQPAIMPFTEATYISQ 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + L Y + + +R LY L L+ Sbjct: 63 FSEQGLSFLHAAKHIHPFRHLQEDIFLAGYATYLLNLADAAIEDRVYDPHLYQFLKEALH 122 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 I E+ +L+ G + C + G T S K G +C Sbjct: 123 FIDEGKDAEIITNIFEVQVLQRFGVQFEWQHCAICGETHGKFDFSSKYSGVLCERHWSLD 182 Query: 180 AEKMLVLPSFL 190 + P + Sbjct: 183 ERRYHADPKAI 193 >gi|117928003|ref|YP_872554.1| DNA repair protein RecO [Acidothermus cellulolyticus 11B] gi|117648466|gb|ABK52568.1| DNA replication and repair protein RecO [Acidothermus cellulolyticus 11B] Length = 263 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 63/183 (34%), Gaps = 6/183 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++DDA++L + GE + I+ V+TR+ GR + + S + L+ N V V Sbjct: 24 YRDDAVVLRTQKLGEADRIITVLTRRNGRVRAVAKGIRRTSSKFGARLEPANHVDVQLYL 83 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + ++ + G + + L E + L + Sbjct: 84 GRSLDIVTQAEIRDPFGDRLRHDYESYTLGTAMLETAEK-LTAEEREPAIRLYLLLLGAL 142 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + + +L+ + G+ L C G W S +GG VC Sbjct: 143 RALTEQRHDARLIFDAFVLRALATSGYQPALDDCARCGAQGPHRWFSVPAGGLVCGDCRP 202 Query: 178 PYA 180 P + Sbjct: 203 PGS 205 >gi|304386731|ref|ZP_07369001.1| recombination protein O [Neisseria meningitidis ATCC 13091] gi|304339189|gb|EFM05273.1| recombination protein O [Neisseria meningitidis ATCC 13091] Length = 248 Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 64/211 (30%), Gaps = 11/211 (5%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L + V +W Sbjct: 13 FLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVSFVPVSASWYGSQELK 72 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 V GL + + +P ELYD L + + Sbjct: 73 TLHRAEWVGGWRQP---QGRALFSGLYVNELVLKLTAREDPMPELYDALAKVMEAVCREA 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV----GLPYAE 181 E LL +G DL G AV L + Sbjct: 130 NHIADLRCFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVCRDTDALSHEA 189 Query: 182 KMLVLPSFLWK--EEQTIDADSLKSAFQLTD 210 +V L E A+SL+ A ++T Sbjct: 190 GAIVEGQSLIDLREGSFRTAESLQQALKITR 220 >gi|240081161|ref|ZP_04725704.1| RecO [Neisseria gonorrhoeae FA19] gi|240124109|ref|ZP_04737065.1| RecO [Neisseria gonorrhoeae PID332] gi|240126274|ref|ZP_04739160.1| RecO [Neisseria gonorrhoeae SK-92-679] gi|254494292|ref|ZP_05107463.1| DNA repair protein recO [Neisseria gonorrhoeae 1291] gi|268597271|ref|ZP_06131438.1| DNA repair protein recO [Neisseria gonorrhoeae FA19] gi|268682733|ref|ZP_06149595.1| DNA repair protein recO [Neisseria gonorrhoeae PID332] gi|268684857|ref|ZP_06151719.1| DNA repair protein recO [Neisseria gonorrhoeae SK-92-679] gi|226513332|gb|EEH62677.1| DNA repair protein recO [Neisseria gonorrhoeae 1291] gi|268551059|gb|EEZ46078.1| DNA repair protein recO [Neisseria gonorrhoeae FA19] gi|268623017|gb|EEZ55417.1| DNA repair protein recO [Neisseria gonorrhoeae PID332] gi|268625141|gb|EEZ57541.1| DNA repair protein recO [Neisseria gonorrhoeae SK-92-679] Length = 247 Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 64/211 (30%), Gaps = 11/211 (5%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L V+W Sbjct: 12 FMLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPASVSWYGSQELK 71 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + GL + + +P ELYD L + + Sbjct: 72 TLHRAEWMGGWRQP---QGRALFSGLYVNELVLKLTAREDPMSELYDALAKVMEAVCREA 128 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV----GLPYAE 181 + E LL +G DL G AV L + Sbjct: 129 NHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVCRDTGALSHEA 188 Query: 182 KMLVLPSFLWK--EEQTIDADSLKSAFQLTD 210 +V L E A+SL+ A ++T Sbjct: 189 GAIVEGQSLIDLREGSFRTAESLQQALKITR 219 >gi|59801847|ref|YP_208559.1| hypothetical protein NGO1509 [Neisseria gonorrhoeae FA 1090] gi|194099318|ref|YP_002002416.1| RecO [Neisseria gonorrhoeae NCCP11945] gi|239999576|ref|ZP_04719500.1| RecO [Neisseria gonorrhoeae 35/02] gi|240014753|ref|ZP_04721666.1| RecO [Neisseria gonorrhoeae DGI18] gi|240017201|ref|ZP_04723741.1| RecO [Neisseria gonorrhoeae FA6140] gi|240113375|ref|ZP_04727865.1| RecO [Neisseria gonorrhoeae MS11] gi|240116279|ref|ZP_04730341.1| RecO [Neisseria gonorrhoeae PID18] gi|240118566|ref|ZP_04732628.1| RecO [Neisseria gonorrhoeae PID1] gi|240121276|ref|ZP_04734238.1| RecO [Neisseria gonorrhoeae PID24-1] gi|240128777|ref|ZP_04741438.1| RecO [Neisseria gonorrhoeae SK-93-1035] gi|260439907|ref|ZP_05793723.1| RecO [Neisseria gonorrhoeae DGI2] gi|268595389|ref|ZP_06129556.1| DNA repair protein recO [Neisseria gonorrhoeae 35/02] gi|268599448|ref|ZP_06133615.1| DNA repair protein [Neisseria gonorrhoeae MS11] gi|268601944|ref|ZP_06136111.1| DNA repair protein [Neisseria gonorrhoeae PID18] gi|268604274|ref|ZP_06138441.1| DNA repair protein [Neisseria gonorrhoeae PID1] gi|268687160|ref|ZP_06154022.1| DNA repair protein [Neisseria gonorrhoeae SK-93-1035] gi|291043181|ref|ZP_06568904.1| DNA repair protein recO [Neisseria gonorrhoeae DGI2] gi|8134656|sp|Q9ZHY2|RECO_NEIG1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238693224|sp|B4RQ94|RECO_NEIG2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|4105531|gb|AAD05426.1| RecO [Neisseria gonorrhoeae] gi|59718742|gb|AAW90147.1| putative DNA recombination protein O [Neisseria gonorrhoeae FA 1090] gi|193934608|gb|ACF30432.1| RecO [Neisseria gonorrhoeae NCCP11945] gi|268548778|gb|EEZ44196.1| DNA repair protein recO [Neisseria gonorrhoeae 35/02] gi|268583579|gb|EEZ48255.1| DNA repair protein [Neisseria gonorrhoeae MS11] gi|268586075|gb|EEZ50751.1| DNA repair protein [Neisseria gonorrhoeae PID18] gi|268588405|gb|EEZ53081.1| DNA repair protein [Neisseria gonorrhoeae PID1] gi|268627444|gb|EEZ59844.1| DNA repair protein [Neisseria gonorrhoeae SK-93-1035] gi|291012787|gb|EFE04770.1| DNA repair protein recO [Neisseria gonorrhoeae DGI2] gi|317164827|gb|ADV08368.1| hypothetical protein NGTW08_1406 [Neisseria gonorrhoeae TCDC-NG08107] Length = 247 Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 64/211 (30%), Gaps = 11/211 (5%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L V+W Sbjct: 12 FMLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPASVSWYGSQELK 71 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + GL + + +P ELYD L + + Sbjct: 72 TLHRAEWMGGWRQP---QGRALFSGLYVNELVLKLTAREDPMSELYDALAKVMEAVCREA 128 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV----GLPYAE 181 + E LL +G DL G AV L + Sbjct: 129 NHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVCRDTGALSHEA 188 Query: 182 KMLVLPSFLWK--EEQTIDADSLKSAFQLTD 210 +V L E A+SL+ A ++T Sbjct: 189 GAIVEGQSLIDLREGSFRTAESLQQALKITR 219 >gi|332799069|ref|YP_004460568.1| DNA repair protein recO [Tepidanaerobacter sp. Re1] gi|332696804|gb|AEE91261.1| DNA repair protein recO [Tepidanaerobacter sp. Re1] Length = 254 Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 65/178 (36%), Gaps = 2/178 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RSR 61 ++ DAI+LG R+ GE + IL + + G+ R + R + + N+ Sbjct: 4 YRTDAIVLGYRNLGEADKILTLFSPDKGKIHAVARGVRRPRNPILAGSQLFSYSNFLILE 63 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + E+ ES + YGL L P + EL+ + Sbjct: 64 GRNLDTISQCEIKESFYKIRQNLESMAYGLYFAELLRVSTPLEDKNQELFRFFLKTMYLL 123 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVSPKSGGAVCRSVGLP 178 + I + E+ L+ GF +L +CV G D ++ S GG +C Sbjct: 124 QKWENIEILSRIYEVKLMAIQGFAPELFQCVGCGRKSFDKIYFSTAMGGILCHDCHGK 181 >gi|319743900|gb|EFV96290.1| recombination protein O [Streptococcus agalactiae ATCC 13813] Length = 253 Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 64/197 (32%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 Q ++L R+Y E + +L++ T G+ + FV++ + +LQ + + Sbjct: 5 QTYGLVLYNRNYREDDKLLKIFTETEGKRMFFVKHASKSKFNAVLQPLTIAHFILKINDN 64 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ + + Y + + +L+ L L + Sbjct: 65 GLSYIDDYKEVLAFQEINSDLFKLSYASYITSLADVAISDNVADAQLFIFLKKTLELIED 124 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ LL+ G L+ CV S K G +C + + Sbjct: 125 GLDYEILTNIFEVQLLERFGVALNFHDCVFCHRAGLPFDFSHKYSGLLCPNHYYKDERRN 184 Query: 184 LVLPSFLWKEEQTIDAD 200 + P+ L+ + Sbjct: 185 HLDPNMLYLINRFQSIQ 201 >gi|160878805|ref|YP_001557773.1| DNA repair protein RecO [Clostridium phytofermentans ISDg] gi|160427471|gb|ABX41034.1| DNA repair protein RecO [Clostridium phytofermentans ISDg] Length = 246 Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 59/178 (33%), Gaps = 2/178 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 I+L G+ + L ++T++ G+ F + + + + ++ +N Sbjct: 8 TGIVLATIPIGDYDKRLTILTKERGKIGAFAKGARRPNSALLACSQPFTYGEFQLYAGRN 67 Query: 66 LGEFRFEVLESHCA-KLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN-CHKI 123 + ++++ S YGL E E+ +L L Sbjct: 68 SYNIQSVNIKNYFGELREDISYVYYGLYFCEFTDYMTREGNDETEMLKLLYQSLRALLNP 127 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 + EL ++ G + +C+ G ++L S +GG C S + Sbjct: 128 HIGTKLVRYIFELKIISLGGEAPQVFECLNCGTKENLSRFSASAGGCFCESCKQKATD 185 >gi|332532633|ref|ZP_08408509.1| DNA recombination and repair protein RecO [Pseudoalteromonas haloplanktis ANT/505] gi|332037849|gb|EGI74298.1| DNA recombination and repair protein RecO [Pseudoalteromonas haloplanktis ANT/505] Length = 230 Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 73/233 (31%), Gaps = 13/233 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVR--NGQSHRMQPILQAGNLVRVNWRSRLA 63 A +L R Y + ++L+++ G+ R Q+ + + LQ + VN+ + Sbjct: 7 TAYLLHRRPYSDSQVMLDMLVEGVGQLRMLARISGRQATKHKAQLQPFQALLVNYSGKYD 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 SH L G R +P EP +++++ L+ Sbjct: 67 LKYINKFELHGNSH---FLKGDELYCGFYLNELTNRIVPVNEPIEQVFELYKTHLSNLNS 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + + ++ E LL+ +G+G+D + + S Sbjct: 124 GANLQEVLRSYEFQLLELLGYGVDFSFDASGEPIDEKQTYSYFPELGFLVQ---EDTRSG 180 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 + + + L++Y L+ + RE F+ Sbjct: 181 FSGKQLNAIANHDFSQNDVLYMAK----QLSRYLLKPLLGSKPLKSRELFMAS 229 >gi|154488980|ref|ZP_02029829.1| hypothetical protein BIFADO_02289 [Bifidobacterium adolescentis L2-32] gi|154083117|gb|EDN82162.1| hypothetical protein BIFADO_02289 [Bifidobacterium adolescentis L2-32] Length = 246 Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 54/158 (34%), Gaps = 6/158 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 +QD+ ++L GE + IL ++TR +G+ + + + + L+ V + Sbjct: 4 YQDEGVVLRTAKLGEADRILTLLTRDHGKVRAVAKGVRRTKSRFGGRLEPFMRVALLIAE 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCL--ELYDMLNIFL 118 + ++ + ++ + + I L E Y ++ L Sbjct: 64 GRSLDVVSQAES-IAAYAGPICADFQAYTAANVICETADKLVATEKEPAAAQYRLVLGAL 122 Query: 119 NCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 N K I L L G+ L CVV G Sbjct: 123 NALAKHAHDSSAIGDSYVLRALAIAGWTPRLRVCVVCG 160 >gi|91227850|ref|ZP_01262023.1| DNA repair protein RecO [Vibrio alginolyticus 12G01] gi|91188360|gb|EAS74656.1| DNA repair protein RecO [Vibrio alginolyticus 12G01] Length = 207 Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 60/205 (29%), Gaps = 11/205 (5%) Query: 32 HLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLY 89 + +S R + LQ + + W + + + + L+ Sbjct: 1 MTLMAKGARSKRSNLKGALQPFTPLLLKWSGKGS---MKTLRQAEPISLGLPLTGINLYS 57 Query: 90 GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLT 149 + + R L P L+ L + EL LL +G+G+D Sbjct: 58 AMYVNELIGRILMAEVPMPALFHDYLHALTELAHNENPEPALRRFELALLSAMGYGVDFL 117 Query: 150 KCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLT 209 C TG D + L E + + + LK+A + T Sbjct: 118 HCAGTGEPVDPEMTYRYREQKGFIASVRRDNLTFLGNELIAISERRFVTKEQLKAAKRFT 177 Query: 210 DYFLNKYALQHNIIHCH-LLRENFL 233 + AL+ + RE F+ Sbjct: 178 -----RIALKPYLGGKPLKSREFFI 197 >gi|293398514|ref|ZP_06642692.1| DNA repair protein RecO [Neisseria gonorrhoeae F62] gi|291610985|gb|EFF40082.1| DNA repair protein RecO [Neisseria gonorrhoeae F62] Length = 247 Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 64/211 (30%), Gaps = 11/211 (5%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQN 65 +L + E ++ +E +R+YGR R+ + + + +L V+W Sbjct: 12 FMLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSELRGVLVPFVPASVSWYGSQELK 71 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + GL + + +P ELYD L + + Sbjct: 72 TLHRAEWMGGWRQP---QGRALFSGLYVNELVLKLTAREDPMSELYDALAKVMEAVCGEA 128 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV----GLPYAE 181 + E LL +G DL G AV L + Sbjct: 129 NHIADLRRFEWKLLNALGVAPDLHADGTGGDILADKTYRLMPEEAVMPVCRDTGALSHEA 188 Query: 182 KMLVLPSFLWK--EEQTIDADSLKSAFQLTD 210 +V L E A+SL+ A ++T Sbjct: 189 GAIVEGQSLIDLREGSFRTAESLQQALKITR 219 >gi|300768137|ref|ZP_07078042.1| recombination protein O [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494201|gb|EFK29364.1| recombination protein O [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 262 Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 66/177 (37%), Gaps = 2/177 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNW 58 M + I+L R Y E++++++ +T +YG+ + F+R + +M L + Sbjct: 5 MVTNFNGILLFRRDYRERDMLIKFLTAEYGKKMFFIRGARRRGFKMAAELLPFTMGEYVG 64 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R + ++ +L Y + + P+ +P Y L L Sbjct: 65 DLRDQGLSYINSVKSVQYLEHISQDIALNAYATYVMNLMDVAFPDNQPVGRWYQQLTSAL 124 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + +E+ LL+ G +L C V G + L S GG +C+ Sbjct: 125 QLIDQDVAPALVANVVEIQLLQPFGVAPELRWCTVCGRSDLPLDYSESYGGLLCQQH 181 >gi|296282559|ref|ZP_06860557.1| hypothetical protein CbatJ_03005 [Citromicrobium bathyomarinum JL354] Length = 198 Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 49/242 (20%), Positives = 79/242 (32%), Gaps = 48/242 (19%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + AI+L R +GE +I ++T + G +V GQ R++P++ GN V + R+ Sbjct: 1 MQLKAPAIVLAARPHGENAVIARMLTHEAGMVAAYVAGGQGRRLRPVVIPGNSVEADIRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R A L + E++ S L L LPER P LYD L L+ Sbjct: 61 RSASQLPFGKVELVASRAPWLNEPLPAAAILWVTALTASTLPERNPYPSLYDALGGLLDA 120 Query: 121 HKIPSV---IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + E++LL+ +G+G Sbjct: 121 ICHAPSARGWAPALLSYEVLLLRELGYG-------------------------------- 148 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 + + D +A L +Y L R L +L Sbjct: 149 -------------GMKPEAGDLPQTLAALGALGPALERYLLAERHGDAMAARGRLLERLA 195 Query: 238 EL 239 + Sbjct: 196 RI 197 >gi|289705003|ref|ZP_06501416.1| DNA repair protein RecO [Micrococcus luteus SK58] gi|289558262|gb|EFD51540.1| DNA repair protein RecO [Micrococcus luteus SK58] Length = 273 Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 30/204 (14%), Positives = 64/204 (31%), Gaps = 5/204 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++ +AI+L GE + I+E +T ++G + + S R+ +++ + Sbjct: 21 FRTEAIVLRTHRLGEADRIIEALTPEHGLVRAVAKGVRKTSSRLGSVVEPFMHSTLQLAR 80 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + ++L + A L + +I +P + Sbjct: 81 GRGELHTVSQAQLLHPYAAMLAADYDAYTVAGAIAEAVERVPAVDDDGRRAQYRLFHGAL 140 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + + LL+ + G+ +C G + GGAVC Sbjct: 141 AALARGAHDPRLILHSFLLRALAQAGWAPTFDRCARCGAPGPHTALHVGLGGAVCPECRP 200 Query: 178 PYAEKMLVLPSFLWKEEQTIDADS 201 P A L D + Sbjct: 201 PGAAHPAPETFDLLSALAAGDWTT 224 >gi|120404781|ref|YP_954610.1| DNA repair protein RecO [Mycobacterium vanbaalenii PYR-1] gi|119957599|gb|ABM14604.1| DNA replication and repair protein RecO [Mycobacterium vanbaalenii PYR-1] Length = 284 Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 24/188 (12%), Positives = 59/188 (31%), Gaps = 14/188 (7%) Query: 1 MYW--------QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQA 50 M W +D A++L GE + I+ ++TR +G + + + L+ Sbjct: 1 MQWETGPMRLYRDRAVVLRQHKLGEADRIVSLLTRDHGLVRAVAKGVRRTRSKFGARLEP 60 Query: 51 GNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL 110 + V + + +++ + ++S +++ + E Sbjct: 61 FAHIDVQLHP-GRNLDIVTQVQAIDAFASDIVSDYGRYTCACAMLETAERIAGEERAPVP 119 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKS 167 + + ++ LL+ + G+ L +C + Sbjct: 120 ALHKLTVAALRAVADGTRPRELVLDAYLLRAMGVAGWAPSLIECARCAAPGPHRAFHVAA 179 Query: 168 GGAVCRSV 175 GG+VC Sbjct: 180 GGSVCVHC 187 >gi|304316660|ref|YP_003851805.1| DNA repair protein RecO [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778162|gb|ADL68721.1| DNA repair protein RecO [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 248 Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 68/184 (36%), Gaps = 2/184 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SR 61 + ++I+L R GE + ++ + T+ G+ + ++ + + + + + Sbjct: 4 IKTESIVLKSRLIGESDKVITLFTKTNGKIQAIAKGARNSKSRFLGSSHPFSIGYYVLFH 63 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD-MLNIFLNC 120 ++E++ S Y +++ L + + + +Y+ + L Sbjct: 64 GQNYYYVDQWELIHSFLKIDDDILKLSYASYFADVVYKLLQDDDRNINIYNLLKYSLLLL 123 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 K + V L + +G+ ++ CV G L++ SP GG +C + Sbjct: 124 EKGSVNNDLLAVLFNLKFVTFMGYMPEVDHCVSCGKKDKLVYFSPAKGGVLCNNCKSAVD 183 Query: 181 EKML 184 + Sbjct: 184 DIFY 187 >gi|118467581|ref|YP_888763.1| DNA repair protein RecO [Mycobacterium smegmatis str. MC2 155] gi|166221898|sp|A0R0S5|RECO_MYCS2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|118168868|gb|ABK69764.1| DNA repair protein RecO [Mycobacterium smegmatis str. MC2 155] Length = 280 Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 59/205 (28%), Gaps = 5/205 (2%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN 57 M ++D A++L GE + I+ ++TR +G + + + L+ + V Sbjct: 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDVQ 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLNI 116 ++ + + + + R E P +L+ + Sbjct: 61 LHPGRNLDIVTQVQAIDAFAADIVSDYGRYTTACAMLETAERLAGEERAPMPDLHRLTVA 120 Query: 117 FLNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L + L + G+ LT+C +GG+VC Sbjct: 121 ALRAIADGRRARELVLDSYLLRAMAIAGWAPALTECARCAAPGPHRAFHVAAGGSVCVHC 180 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDAD 200 + L D + Sbjct: 181 RPSGSSTPPQAVLELMSALHDGDWE 205 >gi|23336019|ref|ZP_00121248.1| COG1381: Recombinational DNA repair protein (RecF pathway) [Bifidobacterium longum DJO10A] gi|23464726|ref|NP_695329.1| DNA repair protein RecO [Bifidobacterium longum NCC2705] gi|189438981|ref|YP_001954062.1| DNA repair protein RecO [Bifidobacterium longum DJO10A] gi|312132421|ref|YP_003999760.1| reco [Bifidobacterium longum subsp. longum BBMN68] gi|322689574|ref|YP_004209308.1| DNA repair protein RecO [Bifidobacterium longum subsp. infantis 157F] gi|42559479|sp|Q8G7Y4|RECO_BIFLO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238692037|sp|B3DQ65|RECO_BIFLD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|23325293|gb|AAN23965.1| hypothetical protein BL0100 [Bifidobacterium longum NCC2705] gi|189427416|gb|ACD97564.1| Recombinational DNA repair protein [Bifidobacterium longum DJO10A] gi|291516146|emb|CBK69762.1| DNA replication and repair protein RecO [Bifidobacterium longum subsp. longum F8] gi|311772908|gb|ADQ02396.1| RecO [Bifidobacterium longum subsp. longum BBMN68] gi|320460910|dbj|BAJ71530.1| DNA repair protein RecO [Bifidobacterium longum subsp. infantis 157F] Length = 239 Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 54/160 (33%), Gaps = 4/160 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D+ ++L GE + I+ ++TR +G+ + + + + L+ V V Sbjct: 4 YRDEGVVLRTSKLGEADRIITILTRGHGKIRAVAKGVRRTKSRFGARLEPFMRVDVLIAE 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC-LELYDMLNIFLN 119 + ++ V + + + + + Y +L LN Sbjct: 64 GRSLDVVSQAEAVAAYGAPIAADYAAYEAANVIVETIDKIASTEHEQLPNQYRLLIGALN 123 Query: 120 CHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 S + I + L G+ L CVV G + Sbjct: 124 ALAKQSHAPQAIGDSYVMRALALAGWTPRLGTCVVCGKAE 163 >gi|169351080|ref|ZP_02868018.1| hypothetical protein CLOSPI_01859 [Clostridium spiroforme DSM 1552] gi|169292142|gb|EDS74275.1| hypothetical protein CLOSPI_01859 [Clostridium spiroforme DSM 1552] Length = 250 Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 77/198 (38%), Gaps = 1/198 (0%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RSRLAQ 64 + ++L + Y E ++++ + T+ YG+ R + + + + + Sbjct: 12 EGLVLKNKPYKESDMLVWIYTKTYGKMALIARGVKKMKSKNAPACQTISLGEYLFIPRKG 71 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + V++ L Y I +++++ + +P E Y+ L + L Sbjct: 72 LSTLIKGSVIDYFVHIKEDIELEAYASYFIEYVYKYILDNDPDEECYNNLLLALKYLNSG 131 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 +++ +LK G L++ +C V G + + +S SGG VC+ Y ++ Sbjct: 132 YDPRLVYLLFNAYILKATGCALEVEQCSVCGDSSHIAGISISSGGFVCKECLGMYDMRLS 191 Query: 185 VLPSFLWKEEQTIDADSL 202 + ++ +++ Sbjct: 192 IEVLKGFRYINKCSLENI 209 >gi|239620813|ref|ZP_04663844.1| DNA repair protein RecO [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239516389|gb|EEQ56256.1| DNA repair protein RecO [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 249 Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 54/160 (33%), Gaps = 4/160 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D+ ++L GE + I+ ++TR +G+ + + + + L+ V V Sbjct: 14 YRDEGVVLRTSKLGEADRIITILTRGHGKIRAVAKGVRRTKSRFGARLEPFMRVDVLIAE 73 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC-LELYDMLNIFLN 119 + ++ V + + + + + Y +L LN Sbjct: 74 GRSLDVVSQAEAVAAYGAPIAADYAAYEAANVIVETIDKIASTEHEQLPNQYRLLIGALN 133 Query: 120 CHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 S + I + L G+ L CVV G + Sbjct: 134 ALAKQSHAPQAIGDSYVMRALALAGWTPRLGTCVVCGKAE 173 >gi|324998272|ref|ZP_08119384.1| DNA repair protein RecO [Pseudonocardia sp. P1] Length = 266 Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 68/183 (37%), Gaps = 6/183 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D ++L V+ GE + I+ ++T+Q G+ + + R + L+ N V V Sbjct: 5 YRDTGVVLRVQKLGEADRIVTMLTKQRGKIRVVAKGVRRTRSRWGARLEPFNHVDVQ-CY 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + +++ +++ +I+ L E L L + Sbjct: 64 TGRTLDVVTQAQTVDAFAPAVVADWSAYSCGCAILETADRLVSEEGEPALRVYLLLLGAT 123 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + + + ++ LL+ + G+ L++C + GG VC Sbjct: 124 RALADGVREPALVLDAFLLRAMSHAGWAPSLSECARCATPGPHRAFTVAGGGMVCPRCRP 183 Query: 178 PYA 180 P + Sbjct: 184 PGS 186 >gi|227495129|ref|ZP_03925445.1| DNA repair protein RecO [Actinomyces coleocanis DSM 15436] gi|226831581|gb|EEH63964.1| DNA repair protein RecO [Actinomyces coleocanis DSM 15436] Length = 244 Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 67/201 (33%), Gaps = 4/201 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++D+ I+L GE + I+ ++T +G + + + L+ +V Sbjct: 5 YRDEGIVLRTHKLGEADRIITLLTHHHGVKRVVAKGVRRTTSKFGSRLEPFTVVDAQIHI 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + ++ + + ++ +V L E + ++Y +L L+ Sbjct: 65 GRSLDVLNQVES-IRQYGLQIAQDYDKYMRASVLVETAERLSEDDASPQMYLLLLGALHA 123 Query: 121 HKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + L + G+ C + G + +SGGAVC P Sbjct: 124 LATGRYPADLVMNSFLLRAMALSGWAPSFWDCALCGANGPSQYFHLQSGGAVCLECRPPG 183 Query: 180 AEKMLVLPSFLWKEEQTIDAD 200 + L E + D + Sbjct: 184 SAAPSAEAMRLLGELLSGDWE 204 >gi|28378609|ref|NP_785501.1| DNA repair protein RecO [Lactobacillus plantarum WCFS1] gi|254556824|ref|YP_003063241.1| DNA repair protein RecO [Lactobacillus plantarum JDM1] gi|38258515|sp|Q88VS1|RECO_LACPL RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|28271445|emb|CAD64350.1| DNA repair protein RecO [Lactobacillus plantarum WCFS1] gi|254045751|gb|ACT62544.1| DNA repair protein RecO [Lactobacillus plantarum JDM1] Length = 258 Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 66/177 (37%), Gaps = 2/177 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNW 58 M + I+L R Y E++++++ +T +YG+ + F+R + +M L + Sbjct: 1 MVTNFNGILLFRRDYRERDMLIKFLTAEYGKKMFFIRGARRRGFKMAAELLPFTMGEYVG 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R + ++ +L Y + + P+ +P Y L L Sbjct: 61 DLRDQGLSYINSVKSVQYLEHISQDIALNAYATYVMNLMDVAFPDNQPVGRWYQQLTSAL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + +E+ LL+ G +L C V G + L S GG +C+ Sbjct: 121 QLIDQDVAPALVANVVEIQLLQPFGVAPELRWCTVCGRSDLPLDYSESYGGLLCQQH 177 >gi|227546836|ref|ZP_03976885.1| recombinational DNA repair protein (RecF pathway) [Bifidobacterium longum subsp. infantis ATCC 55813] gi|317481606|ref|ZP_07940642.1| recombination protein O [Bifidobacterium sp. 12_1_47BFAA] gi|322691535|ref|YP_004221105.1| DNA repair protein RecO [Bifidobacterium longum subsp. longum JCM 1217] gi|227212798|gb|EEI80679.1| recombinational DNA repair protein (RecF pathway) [Bifidobacterium longum subsp. infantis ATCC 55813] gi|316916966|gb|EFV38352.1| recombination protein O [Bifidobacterium sp. 12_1_47BFAA] gi|320456391|dbj|BAJ67013.1| DNA repair protein RecO [Bifidobacterium longum subsp. longum JCM 1217] Length = 239 Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 54/160 (33%), Gaps = 4/160 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D+ ++L GE + I+ ++TR +G+ + + + + L+ V V Sbjct: 4 YRDEGVVLRTSKLGEADRIITILTRGHGKIRAVAKGVRRTKSRFGARLEPFMRVDVLIAE 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC-LELYDMLNIFLN 119 + ++ V + + + + + Y +L LN Sbjct: 64 GRSLDVVSQAEAVAAYGAPIAADYAAYEAANVIVETIDKLASTEHEQLPNQYRLLIGALN 123 Query: 120 CHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 S + I + L G+ L CVV G + Sbjct: 124 ALAKQSHAPQAIGDSYVMRALALAGWTPRLGTCVVCGKAE 163 >gi|290579547|ref|YP_003483939.1| putative DNA repair protein [Streptococcus mutans NN2025] gi|254996446|dbj|BAH87047.1| putative DNA repair protein [Streptococcus mutans NN2025] Length = 251 Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 68/202 (33%), Gaps = 2/202 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + ++L R + E + ++++ T G+H+ FVR+ + ++ ++Q L + Sbjct: 5 ETRGLVLYNRQFREDDKLVKIFTETSGKHMFFVRHATNSKLSSVIQPLILANFILKINNH 64 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ + Y + + + L+ L L Sbjct: 65 GLSYIEDYKGVSLFKEINADIYKLAYATYLVSLADAAISDAVYDAPLFAFLIKTLELMDE 124 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L G L+ CV S + G +C + Sbjct: 125 GLDYEILTNIFEIQILDRFGVQLNFHDCVFCHRVGLAFDFSHRYSGLLCPEHYEKDPYRS 184 Query: 184 LVLP--SFLWKEEQTIDADSLK 203 + P +L + QT+ DSLK Sbjct: 185 HLDPNVPYLLNQFQTLHFDSLK 206 >gi|170017071|ref|YP_001727990.1| DNA repair protein RecO [Leuconostoc citreum KM20] gi|238688966|sp|B1MYE4|RECO_LEUCK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|169803928|gb|ACA82546.1| DNA repair protein RecO [Leuconostoc citreum KM20] Length = 264 Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 27/204 (13%), Positives = 64/204 (31%), Gaps = 6/204 (2%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN--WRSRL 62 IIL R Y + ++++ ++T G R + + LQ ++ + Sbjct: 6 GIILSTRQYKDNDLLVRILTETGGLRTFLARGAKKPKSALGSALQPHAVLSFEGAFPKNN 65 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + ++ + + + Y + + E E Y+ + L Sbjct: 66 QGLGYINDIQTIKIYQRLIDDIEVNAYAALIASLIDQTFEEGEQLTRWYNQFVLGLQKLD 125 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 I E+ LL +G + + ++G + S K G + + Sbjct: 126 EGLDPQIIANIFEIQLLVPLGVAPNWRQDPISGQSVGQFDYSEKYNGIISDKHYDLDDHR 185 Query: 183 MLVLPS--FLWKEEQTIDADSLKS 204 +++ F ++ ID + Sbjct: 186 LMLDQKTVFYLRQFSIIDLRQINQ 209 >gi|304403963|ref|ZP_07385625.1| DNA repair protein RecO [Paenibacillus curdlanolyticus YK9] gi|304346941|gb|EFM12773.1| DNA repair protein RecO [Paenibacillus curdlanolyticus YK9] Length = 250 Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 64/178 (35%), Gaps = 3/178 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M ++ +AII+ YGE N I+ ++T + +R + R + + Q + Sbjct: 1 MLYRTNAIIIRSMDYGEGNKIVTLLTEGGSKAGVIIRGAKKARSRHGSLAQPFTYGEFVF 60 Query: 59 RSRLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 LG E++ES+ L Y + R L + E LY L Sbjct: 61 FRGGGGGLGTLNHGEIMESNHLLRERLELAAYASYAAELADRTLQDDEADPFLYAQLKAC 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + E+ +L+ G+ L C+ + VS GG +CR Sbjct: 121 FEAMQQDKDPQIVSHLFEMKVLQRAGYDPQLNACISCESEEGPFAVSAGGGGVLCRRC 178 >gi|308180765|ref|YP_003924893.1| DNA repair protein RecO [Lactobacillus plantarum subsp. plantarum ST-III] gi|308046256|gb|ADN98799.1| DNA repair protein RecO [Lactobacillus plantarum subsp. plantarum ST-III] Length = 258 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 66/177 (37%), Gaps = 2/177 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNW 58 M + I+L R Y E++++++ +T +YG+ + F+R + +M L + Sbjct: 1 MVTNFNGILLFRRDYRERDMLIKFLTAEYGKKMFFIRGARRRGFKMAAELLPFTMGEYVG 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R + ++ +L Y + + P+ +P Y L L Sbjct: 61 DLRDQGLSYINSVKSVQYLEHISQDIALNAYATYVMNLMDVAFPDNQPVGRWYQQLTSAL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + +E+ LL+ G +L C V G + L S GG +C+ Sbjct: 121 QLIDQDVAPALVANVVEIQLLQPFGVAPELRWCTVCGRSDLPLDYSESYGGLLCQQH 177 >gi|606746|gb|AAB59995.1| unknown [Bacillus subtilis] Length = 114 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 45/114 (39%), Gaps = 1/114 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-R 59 M + + I+L YGE N I+ ++TR++G+ R + + + + ++ Sbjct: 1 MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGAKKPNSRLSAVSQPFLYGSFLM 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM 113 + + + E++ S L Y + R E++P L++ Sbjct: 61 QKTSGLGTLQQGEMILSMRGIREDLFLTAYAAYVAELVDRGTEEKKPNPYLFEF 114 >gi|332523261|ref|ZP_08399513.1| DNA repair protein RecO [Streptococcus porcinus str. Jelinkova 176] gi|332314525|gb|EGJ27510.1| DNA repair protein RecO [Streptococcus porcinus str. Jelinkova 176] Length = 257 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 28/203 (13%), Positives = 77/203 (37%), Gaps = 2/203 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + A++L ++Y E + ++++ T G+ + F+++ ++ ++Q + + Sbjct: 5 ESYALVLYNKNYREDDKLVKLFTETAGKRMFFIKHASKSKLASVIQPLTIADFILKINEK 64 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + ++++ Y + + +P+ E +L+ L+ + Sbjct: 65 GLSYIDDYNDVQTYPRINQDLYRLAYATYVMSLVDAAIPDNESDSQLFAFTRKTLDLMEE 124 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L+ G L+ +CV S K G +C + + Sbjct: 125 GLDYEILTNIFEIQILERFGVRLNFHECVFCHRVGLPFDFSHKYSGPLCPNHLQEDTHRS 184 Query: 184 LVLPS--FLWKEEQTIDADSLKS 204 + P+ +L + Q + LK+ Sbjct: 185 HLDPNVLYLLDQFQNVQFSELKN 207 >gi|72161256|ref|YP_288913.1| DNA repair protein RecO [Thermobifida fusca YX] gi|92087038|sp|Q47RM7|RECO_THEFY RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|71914988|gb|AAZ54890.1| Recombination protein O, RecO [Thermobifida fusca YX] Length = 243 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 66/178 (37%), Gaps = 6/178 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D+ I+L + GE + I+ ++TR+ G + + R + L+ + V + Sbjct: 4 YRDEGIVLRTQDLGEADRIVTLLTRRTGLVRAVGKGVRRTRSRFGARLEPFTHIDVQLHA 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + ++ + + + G+ + + + + L L ++ Sbjct: 64 GKSLDVVTQVDTLHAYGSVLVTDYPRYTAGVAMLETAEKVVSVEK-DPALRQFLLLWGGL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + ++ LL+++ G+ L +C GV + +GG VC Sbjct: 123 RTLAEGAHDPRLVLDAYLLRSLAVAGYAPALEECAHCGVPGPHREFAVHAGGMVCSLC 180 >gi|319779262|ref|YP_004130175.1| DNA recombination and repair protein RecO [Taylorella equigenitalis MCE9] gi|317109286|gb|ADU92032.1| DNA recombination and repair protein RecO [Taylorella equigenitalis MCE9] Length = 205 Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 52/146 (35%), Gaps = 6/146 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSR 61 + A +L S+ + ++I+ V +R+YG G ++ + +PI + V+W Sbjct: 10 EAKAFVLHSISWSDNSLIVNVFSREYGLIAGVAKSAKRPYSVLRPINAHFQPLLVSWSGS 69 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + + R + + +P +L+D L Sbjct: 70 GELKTITKVETDGFYCIPER----ALMSAWYLNELILRGVAKEDPHEKLFDCYEDALLGL 125 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLD 147 + + + E L IG+GLD Sbjct: 126 VSDTDPRIVLRRFEWQWLCEIGYGLD 151 >gi|73748418|ref|YP_307657.1| recombination protein RecO [Dehalococcoides sp. CBDB1] gi|92087028|sp|Q3ZWX7|RECO_DEHSC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|73660134|emb|CAI82741.1| recombination protein RecO [Dehalococcoides sp. CBDB1] Length = 253 Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 67/177 (37%), Gaps = 5/177 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++ AII+ GE + IL ++T G GF ++ + + + L+ V+ + Sbjct: 7 FKTKAIIVRKTKCGEADRILSLLTPDLGLIQGFAKSVRKTKSKLSGHLELLCYSEVSL-A 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R + ++S S L + + F PE ++ +L L Sbjct: 66 RGKAIDTITGSQTIQSFLNIRNSLQLSAMAFYACELAYHFSPEEAANPAMFQLLLSTLEE 125 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD--LLWVSPKSGGAVCRSV 175 S E+ LL + G+ +L +C + + SP+SGG +C + Sbjct: 126 LDNGSQPELCLKYFEINLLASSGYKPELRECANCHKKLQATINYYSPESGGVICPNC 182 >gi|270307942|ref|YP_003330000.1| recombinational DNA repair protein (RecF pathway) [Dehalococcoides sp. VS] gi|270153834|gb|ACZ61672.1| recombinational DNA repair protein (RecF pathway) [Dehalococcoides sp. VS] Length = 262 Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 56/157 (35%), Gaps = 3/157 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++ AI++ GE + IL ++T G GF ++ + + + L+ V+ + Sbjct: 7 FKTRAIVVRKTKCGEADRILSLLTPDLGLIQGFAKSVRKTKSKLSGHLELLCYSEVSL-A 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R + ++S S L + F PE ++ +L L Sbjct: 66 RGKAIDTITGSQTIQSFLNIRNSLQLSAMAFYVCELAYHFSPEESANPSIFQLLLSTLEE 125 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 S EL LL+N G+ +L +C Sbjct: 126 LDNESQAELCIKYFELHLLENSGYKPELRECANCHKK 162 >gi|220932085|ref|YP_002508993.1| DNA repair protein RecO [Halothermothrix orenii H 168] gi|219993395|gb|ACL69998.1| DNA repair protein RecO [Halothermothrix orenii H 168] Length = 258 Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 66/212 (31%), Gaps = 8/212 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 + + I+L GE + I+ +TR G+ + + R ++ + V Sbjct: 4 FNTEGIVLKQFDLGEADKIITFITRDMGKLRAVAKGVRKTRSSISGLVLPFSYAEVT-IY 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R R +V S + Y + + E + L+ +L + Sbjct: 63 RGRSLDKINRIKVKYSFSPLREDLTRMAYASYMAEFIEKVSVEDDNNRALFSLLLSSFHR 122 Query: 121 HKIPSVIGKIFVQIELM---LLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 I + I +L +G +L+ CV G + ++ S Sbjct: 123 LLKAEEISEYNHIILAFKIRILVILGIKPELSSCVDCGQQNNPGSINIFSIERGGLLCHN 182 Query: 178 PYAEKM--LVLPSFLWKEEQTIDADSLKSAFQ 207 + M + + E I A+ + S + Sbjct: 183 CSSNHMDGMGGVQKISGESLRIMANIIDSGLK 214 >gi|147669198|ref|YP_001214016.1| DNA repair protein RecO [Dehalococcoides sp. BAV1] gi|289432466|ref|YP_003462339.1| DNA repair protein RecO [Dehalococcoides sp. GT] gi|189039655|sp|A5FRN7|RECO_DEHSB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|146270146|gb|ABQ17138.1| DNA replication and repair protein RecO [Dehalococcoides sp. BAV1] gi|288946186|gb|ADC73883.1| DNA repair protein RecO [Dehalococcoides sp. GT] Length = 253 Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 67/177 (37%), Gaps = 5/177 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++ AII+ GE + IL ++T G GF ++ + ++ L+ V+ + Sbjct: 7 FKTKAIIVRKTKCGEADRILSLLTPDLGLIQGFAKSVRKTTSKLSGHLELLCYSEVSL-A 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R + ++S S L + + F PE L+ +L L Sbjct: 66 RGKAIDTITGSQTIQSFLNIRNSLQLSAMAFYACELAYHFSPEEAANPALFQLLLSTLEE 125 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD--LLWVSPKSGGAVCRSV 175 S E+ LL + G+ +L +C + + SP+SGG +C + Sbjct: 126 LDNGSQPELCLKYFEINLLASSGYKPELRECANCHKKLQATINYYSPESGGVICPNC 182 >gi|148655450|ref|YP_001275655.1| DNA repair protein RecO [Roseiflexus sp. RS-1] gi|172048082|sp|A5USV2|RECO_ROSS1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|148567560|gb|ABQ89705.1| DNA repair protein RecO [Roseiflexus sp. RS-1] Length = 283 Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 60/179 (33%), Gaps = 6/179 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++ +AII+ GE + ++ ++T GR R + R+ ++ + Sbjct: 6 YRTEAIIIRRSDAGEADRLVTILTP-LGRQRVVARGARKLHSRLAGHIELFTHTMLMLAI 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 ++ + + + R + E + +L L Sbjct: 65 GRNLHIVTQSSPLDRFER-LRTDLERIGAAYYAAELVDRLVEEEAENKRAFSILLGTLRA 123 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCRSVGL 177 + I EL LL +G+ L +C G +T+ SP +GGA+C Sbjct: 124 LNAGAAIDLTLRAYELHLLDALGYRPQLYECAACGAVLTEATNRFSPVTGGALCPDCAG 182 >gi|167755647|ref|ZP_02427774.1| hypothetical protein CLORAM_01162 [Clostridium ramosum DSM 1402] gi|167704586|gb|EDS19165.1| hypothetical protein CLORAM_01162 [Clostridium ramosum DSM 1402] Length = 248 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 70/188 (37%), Gaps = 7/188 (3%) Query: 1 MYWQDD----AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLV 54 M + ++L + Y E +++L + T YG+ + + + P Q L Sbjct: 1 MIINGEENITGLVLKNKPYKENDMLLWIYTHDYGKLALIAKGVKKLKSKNAPSCQTITLS 60 Query: 55 RVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 + R + +E L Y +++F + +P +Y+ L Sbjct: 61 EFTFIPRSGLSNLIKGAP-VEYFRYIKEDIELEAYASYFCEFVYKFTKDNDPDETIYNTL 119 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + L + +++ +++ G L++ +CV G + VS SGG VC+ Sbjct: 120 LLALRSLQTGYNPKLVYLLFNAFIMEKTGSSLEVDQCVSCGRLDHISGVSIHSGGFVCQE 179 Query: 175 VGLPYAEK 182 Y +K Sbjct: 180 CIGMYDQK 187 >gi|229817202|ref|ZP_04447484.1| hypothetical protein BIFANG_02462 [Bifidobacterium angulatum DSM 20098] gi|229784991|gb|EEP21105.1| hypothetical protein BIFANG_02462 [Bifidobacterium angulatum DSM 20098] Length = 240 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 64/205 (31%), Gaps = 7/205 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 + D+ ++L GE + I+ ++TR +G+ + + + + L+ V V + Sbjct: 4 YHDEGVVLRTAKLGEADRIITLLTRDHGKVRAVAKGVRRAKSRFGGRLEPFMRVDV-LIA 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL---PEREPCLELYDMLNIF 117 + E + ++ + + I L + + Sbjct: 63 EGRTLDTISQVESISAYAGPICADYDSYTAANVIAETADKLASAENERVTAQYRLLAGAL 122 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 I + L G+ L C+V + + S GGA+C + Sbjct: 123 NALATHAHGPELISASYVMRALSLAGWTPRLASCMVCDSRE-ITHFSVPDGGALCATHHT 181 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSL 202 P +E + + + D L Sbjct: 182 PRSEPIPLPVRAELEALMNGDWREL 206 >gi|183983652|ref|YP_001851943.1| recombination protein O RecO [Mycobacterium marinum M] gi|238690926|sp|B2HLB2|RECO_MYCMM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|183176978|gb|ACC42088.1| recombination protein O RecO [Mycobacterium marinum M] Length = 265 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 58/181 (32%), Gaps = 7/181 (3%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN 57 M ++D A++L GE + I+ ++TR +G + + + L+ + Sbjct: 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGSRLEPFAHIDAQ 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + +++ A +++ +++ L E Sbjct: 61 LHP-GRNLDIVTQVVSIDAFAADIVNDYGRYTCGCAMLETAERLAGEERAPAPALHRLTV 119 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + + ++ LL+ + G+ LT+C +GG+VC Sbjct: 120 GALRAVADGSRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIAAGGSVCPH 179 Query: 175 V 175 Sbjct: 180 C 180 >gi|291456391|ref|ZP_06595781.1| DNA repair protein RecO [Bifidobacterium breve DSM 20213] gi|291381668|gb|EFE89186.1| DNA repair protein RecO [Bifidobacterium breve DSM 20213] Length = 240 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 72/207 (34%), Gaps = 5/207 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D+ ++L GE + I+ ++TR++G+ + + + + L+ V + Sbjct: 5 YRDEGVVLRTAKLGEADRIITLLTREHGKIRAVAKGVRRTKSRFGARLEPFMRVDLLIAE 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC-LELYDMLNIFLN 119 + ++ V A + + + + + + Y +L LN Sbjct: 65 GRSLDVVSQAESVASYGAAIAADYAAYEAANVIVETIDKLVSTEHEQLPNQYRLLIGALN 124 Query: 120 CH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 K I + L G+ L CVV G + + S SGG +C + Sbjct: 125 ALAKHAHASQTISESYVMRALALAGWTPRLATCVVCGKPE-RRYFSIASGGVMCEADHTT 183 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSA 205 A ++ L D L +A Sbjct: 184 DARRIAPLVLSQLDALIRGDWSVLDNA 210 >gi|237734395|ref|ZP_04564876.1| recombination protein O [Mollicutes bacterium D7] gi|229382625|gb|EEO32716.1| recombination protein O [Coprobacillus sp. D7] Length = 253 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 70/188 (37%), Gaps = 7/188 (3%) Query: 1 MYWQDD----AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLV 54 M + ++L + Y E +++L + T YG+ + + + P Q L Sbjct: 6 MIINGEENITGLVLKNKPYKENDMLLWIYTHDYGKLALIAKGVKKLKSKNAPSCQTITLS 65 Query: 55 RVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 + R + +E L Y +++F + +P +Y+ L Sbjct: 66 EFTFIPRSGLSNLIKGAP-VEYFRYIKEDIELEAYASYFCEFVYKFTKDNDPDETIYNTL 124 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + L + +++ +++ G L++ +CV G + VS SGG VC+ Sbjct: 125 LLALRSLQTGYNPKLVYLLFNAFIMEKTGSSLEVDQCVSCGRLDHISGVSIHSGGFVCQE 184 Query: 175 VGLPYAEK 182 Y +K Sbjct: 185 CIGMYDQK 192 >gi|255292115|dbj|BAH90592.1| DNA repair protein RecO [uncultured bacterium] gi|255292993|dbj|BAH90090.1| DNA repair protein RecO [uncultured bacterium] Length = 266 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 67/186 (36%), Gaps = 8/186 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+A++L GE + I+ ++R++G+ R + S + L+ V V + + Sbjct: 24 YRDEAVVLRTHKLGEADRIITFLSRRHGKVRAAARGVRRTSSKFGARLEPFTHVDVQFAN 83 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCL-ELYDMLNIFLN 119 + + + S + G + R + E + + +L L Sbjct: 84 GRSLEIVAQVESIRAFGEPLSRDFSRWTAGQAMLETADRLVTEEGQPAVQQFLLLVGALR 143 Query: 120 CHK--IPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + ++ LL+++ G+ T C G SP +GG VC Sbjct: 144 VLNEGTTDGPRETSTILDSYLLRSLAVAGYAPTFTDCAKCGSPGPHRAFSPAAGGVVCGV 203 Query: 175 VGLPYA 180 P + Sbjct: 204 CRPPGS 209 >gi|78189922|ref|YP_380260.1| recombination protein O, RecO [Chlorobium chlorochromatii CaD3] gi|78172121|gb|ABB29217.1| DNA replication and repair protein RecO [Chlorobium chlorochromatii CaD3] Length = 283 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 60/158 (37%), Gaps = 4/158 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR 59 + A++L ++ +++ I + +R +GR ++ ++ + + + AGN++ V Sbjct: 24 IVKTRAVVLRETNFRDQSRICSLYSRDFGRLSVIIKGARNPKNRLCGLFSAGNILDVVIY 83 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLNIFL 118 + + L L + L I+ + + +L+ +L L Sbjct: 84 RKSGRELQLASDATLVASPLMAEPDMERFAALYRIIDVVKQATAEHEHNPQLFTLLAATL 143 Query: 119 NCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + S + L L+ +GF L +CV + Sbjct: 144 QSLYQQGSNNLLLTAWFLLRLVSLLGFQPSLRQCVFSN 181 >gi|224369905|ref|YP_002604069.1| RecO [Desulfobacterium autotrophicum HRM2] gi|223692622|gb|ACN15905.1| RecO [Desulfobacterium autotrophicum HRM2] Length = 258 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 66/213 (30%), Gaps = 10/213 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAG--NLVRVNW 58 + D I+L YG+ ++I+ T GR +N + R L+ + W Sbjct: 4 FSTDGIVLKRIEYGDNDLIVTFFTTAMGRVSVIAKNAKKSVKRFAGALEPFSVMNLECTW 63 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R ++ + Y + + + E + ELY++L L Sbjct: 64 PRRKNALPLLNAVDLSYPFAKIRTHTVKTGYACYWLELINSSIEEGKKQGELYELLFFVL 123 Query: 119 NCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT-----GVTQDLLWVSPKSGGAVC 172 + + ++ + G DLT C G+ Q + G VC Sbjct: 124 QALDADTMDKEILSLLFQIRFMNLSGLCPDLTSCGTCSTPLDGMAQHRIIFDFAQGCLVC 183 Query: 173 RSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSA 205 + + K+ I+ L+ A Sbjct: 184 DRCAKGAVRHGITVTKGTLKQLSWINNTDLRRA 216 >gi|260220753|emb|CBA28633.1| DNA repair protein recO [Curvibacter putative symbiont of Hydra magnipapillata] Length = 249 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 50/150 (33%), Gaps = 7/150 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSR 61 + A +L + E ++ILEV TR YGR + + +PIL + V + Sbjct: 8 DEPAFVLHRYDWSESSLILEVFTRHYGRVALVAKGVKKPTSSFRPILLPLQPLHVAF--- 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + L G L L +P EL+D+ + Sbjct: 65 GGDAEIRTLRSAEWQGGHVMPTGDALLSGYYLNELLITLLARDDPHAELFDIYAQVVRVI 124 Query: 122 KIPSVI--GKIFVQIELMLLKNIGFGLDLT 149 EL+LL+ +GF L Sbjct: 125 SSEHGEVLQAALRTFELLLLREVGFLPQLD 154 >gi|313889561|ref|ZP_07823206.1| DNA repair protein RecO [Streptococcus pseudoporcinus SPIN 20026] gi|313122070|gb|EFR45164.1| DNA repair protein RecO [Streptococcus pseudoporcinus SPIN 20026] Length = 257 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 78/203 (38%), Gaps = 2/203 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + A++L ++Y E + ++++ T G+ + F+++ ++ ++Q + + Sbjct: 5 ESYALVLYNKNYREDDKLVKLFTETAGKRMFFIKHASKSKLASVIQPLTIADFMLKINEK 64 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + ++++ Y + + +P+ EP +L+ L+ + Sbjct: 65 GLSYIDDYNDVQTYPRINQDLYRLAYATYVMSLVDAAIPDNEPDSQLFAFARKTLDLMEE 124 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ +L+ G L+ +CV S K G +C + + Sbjct: 125 GLDYEILTNIFEIQILERFGVRLNFHECVFCHRVGLPFDFSHKYSGPLCPNHLYEDTHRS 184 Query: 184 LVLPS--FLWKEEQTIDADSLKS 204 + P+ +L + Q + LK+ Sbjct: 185 HLDPNVLYLLDQFQNVQFSELKN 207 >gi|298346620|ref|YP_003719307.1| DNA repair protein RecO [Mobiluncus curtisii ATCC 43063] gi|298236681|gb|ADI67813.1| DNA repair protein RecO [Mobiluncus curtisii ATCC 43063] Length = 243 Score = 82.9 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 67/205 (32%), Gaps = 5/205 (2%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVN 57 M ++D A++L + GE + I+ ++T ++G R + R+ L+ V + Sbjct: 1 MRTFRDAAVVLRTQDLGEADRIVTLLTEKHGLLRCVGRGVRKTTSRLGARLEPFGTVDIQ 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 R + + E+L + L + +V L E E Y L Sbjct: 61 IRWGKSNLHHIEQVEILAPYGRSLANDYARYTAANLMVETLERLTEDSWTNERYYHLTNG 120 Query: 118 LNCHKIPSVIGK--IFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 I L L+ G+ C G + +P GGA+C + Sbjct: 121 ALHALATGRHEPSLILDSYLLRLMSLAGWAASCWDCASCGARGPHEYFNPSGGGAMCVNC 180 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDAD 200 L A + L T D Sbjct: 181 KLTGARPVDSETMRLLAALATGDWQ 205 >gi|213691677|ref|YP_002322263.1| DNA repair protein RecO [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254790513|sp|B7GQ05|RECO_BIFLI RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|213523138|gb|ACJ51885.1| DNA repair protein RecO [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457768|dbj|BAJ68389.1| DNA repair protein RecO [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 239 Score = 82.9 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 55/157 (35%), Gaps = 4/157 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D+ ++L E + I+ V+TR +G+ + + + + L+ V + Sbjct: 4 YRDEGVVLRTSKLAEADRIITVLTRDHGKIRAVAKGVRRTKSRFGARLEPFMRVDLLIAE 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLNIFLN 119 + + + A + + + + + + + + Y +L LN Sbjct: 64 GRSLDTVSQAESIAAYGAAIVGDYAAYEAANVIVETIDKLVGTERERMTDQYRLLIGALN 123 Query: 120 CHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTG 155 + + I + L G+ L CVV G Sbjct: 124 ALAKRAHAPQAIGCSYVMRALALAGWTPRLGTCVVCG 160 >gi|50955078|ref|YP_062366.1| DNA repair protein RecO [Leifsonia xyli subsp. xyli str. CTCB07] gi|61214918|sp|Q6AED5|RECO_LEIXX RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|50951560|gb|AAT89261.1| single-stranded DNA binding protein [Leifsonia xyli subsp. xyli str. CTCB07] Length = 249 Score = 82.9 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 4/183 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++D+A++L GE + I+ +++RQ+G+ + + R L+ + V Sbjct: 4 YRDEAVVLRTHKLGEADRIVTMLSRQHGKIRAVAKGVRRTASRFGSRLEPFMVADVQLYE 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + ++ + ++ A + ++V L + E L+ Y +L L Sbjct: 64 GRSLDVVTQAET-IGAYGAAIAEDYASYTAANAMVEAADRLTDAEASLQQYLLLVGALRS 122 Query: 121 HKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + L +L G+ C G V + GG VC Sbjct: 123 LSRGEHGPGLTLDSYLLRVLSLAGWAPSFQDCSRCGRPGPHRQVVVQLGGVVCPDCAPQG 182 Query: 180 AEK 182 A + Sbjct: 183 ASR 185 >gi|213965771|ref|ZP_03393963.1| DNA repair protein RecO [Corynebacterium amycolatum SK46] gi|213951530|gb|EEB62920.1| DNA repair protein RecO [Corynebacterium amycolatum SK46] Length = 249 Score = 82.9 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 67/184 (36%), Gaps = 6/184 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D A+++ GE + I+ + TR +G G + + + + L V VN Sbjct: 5 YRDRALVVRRYDLGEADRIIVLFTRDHGLVRGVAKGVRRAKSRFGSRLSPFVDVNVNIYP 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R + + + + A L+ +++ + + E + Sbjct: 65 RRGLST-IAGADTVRTWAAPLVDDYARYTCACAVLDVAERIVGEEQVPAPELWDLATQSL 123 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 I + + + + +L+ + G+ L +C G SP GGAVC + Sbjct: 124 DDIAARRHRPDLLLTSYILRAMAQAGWQPSLFECAGCGKAGPHHAFSPALGGAVCTNCRP 183 Query: 178 PYAE 181 P A+ Sbjct: 184 PGAD 187 >gi|68535681|ref|YP_250386.1| DNA repair protein RecO [Corynebacterium jeikeium K411] gi|68263280|emb|CAI36768.1| DNA repair protein RecO [Corynebacterium jeikeium K411] Length = 249 Score = 82.9 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 61/179 (34%), Gaps = 3/179 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D+A +L GE ++IL ++TR G + + R + L + V V Sbjct: 9 FRDEAFVLRTYKLGEADLILVLLTRDNGLIRAVAKGIRKTRSRFGARLDRFSRVDVQIYP 68 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + V + F G + F E ++ +L+ L Sbjct: 69 GRSLANVTDAATVATYASPIVADVDRFYAGAAMLEMAQVFAAEPSSAHSIFFLLDAALQQ 128 Query: 121 HKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 ++ + + L L+ G+ L C G P +GGAVC + P Sbjct: 129 LTTSALPPVSVADEFVLHGLEVAGWEPSLVDCAQCGKRGPHRAFHPGAGGAVCVTCRPP 187 >gi|194333040|ref|YP_002014900.1| DNA repair protein RecO [Prosthecochloris aestuarii DSM 271] gi|238693299|sp|B4S3Q7|RECO_PROA2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|194310858|gb|ACF45253.1| DNA repair protein RecO [Prosthecochloris aestuarii DSM 271] Length = 264 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 61/159 (38%), Gaps = 4/159 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M + +IL + +++ I V T +G+ ++ ++ + + + GN+V + Sbjct: 1 MLVKTRGVILKEIKFRDQSKICPVFTEHFGKISVILKGVRNPKNKLSGVFSTGNMVELVI 60 Query: 59 RSR-LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + +L+S + F Q I L + EP L+ L Sbjct: 61 YKKQNRDLHLVSDALLLQSPMSARPDMERFTTIYQLIETLKQVTGSEEPHPVLFRFLAAT 120 Query: 118 LNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTG 155 + P ++ + L+ +GF +L +CV++G Sbjct: 121 IEELCKPERDYQLVLAWFLIRLVTVLGFEPELEQCVISG 159 >gi|317401888|gb|EFV82495.1| hypothetical protein HMPREF0005_00527 [Achromobacter xylosoxidans C54] Length = 202 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 53/144 (36%), Gaps = 6/144 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L ++ E ++I++ +R +G + + +P+L A + ++W Sbjct: 19 PGYMLHATAWRETSLIVQTFSRDHGCVAMVAKGAKRPYSVLRPVLSAFQPLLLSWTGNGE 78 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 E + L+ + + L R LP + L+D ++ L Sbjct: 79 VKT----LTRAEIMGVRALNGTALMSAWYMNELLLRLLPREDAHPLLFDAYDMALQQLSG 134 Query: 124 PSVIGKIFVQIELMLLKNIGFGLD 147 + + E LL+ G+G+D Sbjct: 135 GTRAAGALRRFEWTLLRETGYGVD 158 >gi|85374495|ref|YP_458557.1| hypothetical protein ELI_08340 [Erythrobacter litoralis HTCC2594] gi|84787578|gb|ABC63760.1| hypothetical protein ELI_08340 [Erythrobacter litoralis HTCC2594] Length = 200 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 + AI+L R +GE +I ++T ++G G+V G+ +++P++ GNLV + R++ Sbjct: 4 NLRAPAILLAARPHGETAVIARLLTEEFGMVAGYVAGGRGRQLRPVVIPGNLVELELRAK 63 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 L + E++ES L + LPER LY L L+ Sbjct: 64 SDSQLPFAKLELVESRGPWLSEPLPAAAIQWATALTATALPERNAYPNLYSALVALLDAV 123 Query: 122 KIPSV---IGKIFVQIELMLLKNIGFG 145 + E +LL+ +G+G Sbjct: 124 CQAPSARGWAPALLSYEALLLRELGYG 150 >gi|320105079|ref|YP_004180670.1| DNA repair protein RecO [Isosphaera pallida ATCC 43644] gi|319752361|gb|ADV64121.1| DNA repair protein RecO [Isosphaera pallida ATCC 43644] Length = 257 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 55/155 (35%), Gaps = 3/155 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR 61 + A+++ E + +L V +R+ G+ + + + L ++ + + Sbjct: 5 RTLALVIRSTEVFETSKVLTVFSRELGKVSAIAKGARRLKSPFHSALDLLSVCDMVLIHK 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLNIFLNC 120 L LE L + LY + L L E P +L++ + L Sbjct: 65 GTDALDLVTEATLEERFDALKTDLEALYAGYYVAELLDGLTEHHVPHPKLFEAARVTLRH 124 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + ++ EL LL+ +G L CV G Sbjct: 125 LADSRLRRHRVLRFELALLRELGHAPALENCVHCG 159 >gi|289642684|ref|ZP_06474824.1| DNA repair protein RecO [Frankia symbiont of Datisca glomerata] gi|289507514|gb|EFD28473.1| DNA repair protein RecO [Frankia symbiont of Datisca glomerata] Length = 243 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 72/203 (35%), Gaps = 6/203 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+ ++L E + I+ V+TR+ GR + + S R L+ G V + Sbjct: 4 YRDEGVVLRTTPLAEADRIITVLTRRTGRIRAVAKGVRRTSSRFGARLEPGTYVDLQLYE 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + + ++L + A + S ++ L E + L + Sbjct: 64 GRSLDT-VTQADILSPYGAVIASDYPRHTAAAVMLETAERLTSEERQPAMRLFLLLVGGL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + ++ LL+ + G+G+ L C G S +GG VC Sbjct: 123 RTLAQGERAPSLVLDAFLLRALTIAGYGMALADCAHCGDPGPHHAFSVPAGGVVCPECRP 182 Query: 178 PYAEKMLVLPSFLWKEEQTIDAD 200 A M L + T D D Sbjct: 183 HGAVSMSPAAVKLLSDLLTGDWD 205 >gi|310828429|ref|YP_003960786.1| DNA repair protein RecO [Eubacterium limosum KIST612] gi|308740163|gb|ADO37823.1| DNA repair protein RecO [Eubacterium limosum KIST612] Length = 248 Score = 82.6 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 21/175 (12%), Positives = 56/175 (32%), Gaps = 3/175 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR-L 62 + I++ + + E++ I+ + T + G+ + + +R + + Sbjct: 5 KTKGIVIREQPFQEQDKIITLFTEEEGKIKAIAKGVRRNRSPLVAATQLFAYSEFVYYPG 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH- 121 + +++S + L F + + ++N L Sbjct: 65 KNFANINQASLIQSFYPLRNDLMKMSLASYVLELLDAFYDYYQGNKAVLRLVNFILFYLS 124 Query: 122 -KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + ++L L + G C + G T+ L S ++ G +C + Sbjct: 125 EDKSQSNEALVAALQLKLTEVHGIRPVFDTCALCGSTEHLTHFSIENNGVLCENC 179 >gi|33597817|ref|NP_885460.1| hypothetical protein BPP3293 [Bordetella parapertussis 12822] gi|33602719|ref|NP_890279.1| hypothetical protein BB3744 [Bordetella bronchiseptica RB50] gi|33574246|emb|CAE38578.1| hypothetical protein BPP3293 [Bordetella parapertussis] gi|33577161|emb|CAE35718.1| hypothetical protein BB3744 [Bordetella bronchiseptica RB50] Length = 195 Score = 82.6 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 52/144 (36%), Gaps = 6/144 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L ++ E ++I++ +R+YG + + +P+L A + ++W Sbjct: 12 PGYMLHATAWRETSLIVQAFSREYGCIALVAKGAKRPYSVLRPVLSAFQPLLLSWSGAGE 71 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 E + L + L R LP + LYD + L Sbjct: 72 VKTMTRA----EIAGVRPLGGPALMSAWYMNELLLRLLPREDAHPVLYDAYDTALTQLSA 127 Query: 124 PSVIGKIFVQIELMLLKNIGFGLD 147 S + E +LL+ G+GLD Sbjct: 128 GSRAAGALRRFEWILLRETGYGLD 151 >gi|120609886|ref|YP_969564.1| DNA repair protein RecO [Acidovorax citrulli AAC00-1] gi|166221879|sp|A1TLF2|RECO_ACIAC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|120588350|gb|ABM31790.1| DNA repair protein RecO [Acidovorax citrulli AAC00-1] Length = 260 Score = 82.6 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 42/128 (32%), Gaps = 4/128 (3%) Query: 2 YWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 D+ A +L + E ++IL+V TR +GR R + +P+L +R+ + Sbjct: 5 RISDEPAYVLHRYDWSESSLILDVFTRHHGRVALVARGAKKPTSNFRPVLLPLQPLRITY 64 Query: 59 RSRLAQNLGEFRFEV-LESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + + L GL L R L + L+D Sbjct: 65 TLNGEGREEVHGLKGAEWVGGHVMPTGDALLSGLYLNELLMRLLAREDTHAALFDAYAGV 124 Query: 118 LNCHKIPS 125 + Sbjct: 125 VRVLASEH 132 >gi|78187879|ref|YP_375922.1| recombination protein O, RecO [Chlorobium luteolum DSM 273] gi|123582452|sp|Q3B1A2|RECO_PELLD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|78167781|gb|ABB24879.1| DNA replication and repair protein RecO [Chlorobium luteolum DSM 273] Length = 264 Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 62/159 (38%), Gaps = 4/159 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M + A++L Y +++ IL + TR++GR ++ G++ + + I AGN++ + Sbjct: 1 MIVKTRAVVLREIKYRDQSKILTLYTREFGRLACILKGGRNPKNRLSGIFSAGNVLDIVL 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIF 117 + + + L S L I+ L R L+ +L Sbjct: 61 YRKPEREVQLISDGSLVSCPMVPGPDIERFGVLYRIIDLVRLTTEHDGRSPRLFSLLEST 120 Query: 118 LNCHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 L V ++ L + GF +L +CV +G Sbjct: 121 LLELNRERVAYRTLYAWFLLRFISLQGFAPELCRCVFSG 159 >gi|323703323|ref|ZP_08114973.1| DNA repair protein RecO [Desulfotomaculum nigrificans DSM 574] gi|323531686|gb|EGB21575.1| DNA repair protein RecO [Desulfotomaculum nigrificans DSM 574] Length = 256 Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 4/152 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSRLA 63 DAIIL R E + IL + + Q G+ + + +Q + R Sbjct: 7 DAIILKSRDMREADKILTLYSIQQGKQRVVAHGAAKPKSRKRGAVQPFCYSSLMLH-RGK 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + E+ ES FL E EP ++ +L L+ Sbjct: 66 ELDSVSQAELKESFPELRTDLDRLAGAAYMAELADGFLGEGEPNQAIFGLLLATLHLMAK 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + E L+ GF +L C G Sbjct: 126 GDTQLALRA-FEAKLMWLTGFKPELDHCTGCG 156 >gi|237807625|ref|YP_002892065.1| DNA repair protein RecO [Tolumonas auensis DSM 9187] gi|259563685|sp|C4LC00|RECO_TOLAT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|237499886|gb|ACQ92479.1| DNA repair protein RecO [Tolumonas auensis DSM 9187] Length = 239 Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 37/239 (15%), Positives = 78/239 (32%), Gaps = 17/239 (7%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRL 62 A +L R Y E + ++++ G+ + +S R + +LQ + +++ + Sbjct: 7 SPAFVLHTRPYRETSQLVDLFVASMGKVSVVAKGSRSPRSSVKGLLQPFLPLHIHYGGKS 66 Query: 63 AQNLGEFRFEVLESHCAKL-LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + LE+ ++ L L L+ L L+ L Sbjct: 67 SLKT----LLQLEARSPQVALQGERLFSALYLNELLYYLLEPDTEYPGLFSGYFQTLLAL 122 Query: 122 -KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 ++ + Q EL+LL+ +G+G D + + D A + L Sbjct: 123 ADQQQLVSPLLRQFELLLLQQLGYGADFCYAADSCLPIDPACYYRYEPEAGFITTALRDH 182 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLREN---FLGK 235 E+ D L +A + + + A + + RE F+ + Sbjct: 183 AFFSGREIIGIAEQAFSDEYILAAARRFS-----RQAFAALLGNRPLKSRELYSAFIAR 236 >gi|161486576|ref|NP_787413.2| DNA repair protein RecO [Tropheryma whipplei str. Twist] gi|161501890|ref|NP_789416.2| DNA repair protein RecO [Tropheryma whipplei TW08/27] Length = 241 Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 73/210 (34%), Gaps = 5/210 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR 59 +++D AI+L + GE + I+ + TR G + + + + L+ ++ + Sbjct: 4 HYRDRAIVLRTKPLGEADRIITLFTRSNGTSDFVAKGIRRPKSRFGSSLEPFTVIDA-FL 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 G + E+L S+ ++L+ S+ I R L ++ +D+L+ + Sbjct: 63 YIGRGMDGVSQAEILASYGSRLVKSTESYIAANVIAETGRRLGIAGGSVQQFDLLHGAFS 122 Query: 120 CHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL- 177 I L + G+ L C + + +GG VC S Sbjct: 123 ALSRGISSPEAICSSYLLRSMSAAGWRPALENCAKCLLPLVEYTIDISAGGLVCTSCSEH 182 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQ 207 P L +E + + + Sbjct: 183 PVVNNKLCEYLLALREGDWPYINESDESLR 212 >gi|307545608|ref|YP_003898087.1| DNA repair protein RecO [Halomonas elongata DSM 2581] gi|307217632|emb|CBV42902.1| DNA repair protein RecO [Halomonas elongata DSM 2581] Length = 233 Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 45/119 (37%), Gaps = 5/119 (4%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRL 62 + A +L R Y E + ++E++T +GR R Q R++ +LQ + V W Sbjct: 4 EPAYLLHKRPYRETSALVELLTFHHGRVRAVARGVQRPGSRLRAVLQPFAPLHVTWSGSG 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 A +L L GL + L R LP P +++ L+ Sbjct: 64 DLKRLGLMESR---GSAAMLVGEGLLCGLYANELLARLLPVEMPVDDVFAFYAAALDAL 119 >gi|304389667|ref|ZP_07371627.1| recombination protein O [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315656965|ref|ZP_07909850.1| DNA repair protein RecO [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|304327071|gb|EFL94309.1| recombination protein O [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315492357|gb|EFU81963.1| DNA repair protein RecO [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 243 Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 68/205 (33%), Gaps = 5/205 (2%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVN 57 M ++D A++L + GE + I+ ++T ++G R + R+ L+ V + Sbjct: 1 MRTFRDAAVVLRTQDLGEADRIVTLLTEKHGLLRCVGRGVRKTTSRLGARLEPFGTVDIQ 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLNI 116 R + + E+L + L + +V L E Y + Sbjct: 61 IRWGKSNLHHIEQVEILAPYGRSLANDYARYTAANLMVETLERLTEDSWTNERYYHLTIG 120 Query: 117 FLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L+ I L L+ G+ C G + +P GGA+C + Sbjct: 121 ALHALATGRHEPSLILDSYLLRLMSLAGWAASCWDCASCGARGPHEYFNPSGGGAMCVNC 180 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDAD 200 L A + L T D Sbjct: 181 KLTGARPVDSETMRLLAALATGDWQ 205 >gi|326316029|ref|YP_004233701.1| DNA repair protein RecO [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372865|gb|ADX45134.1| DNA repair protein RecO [Acidovorax avenae subsp. avenae ATCC 19860] Length = 260 Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 42/128 (32%), Gaps = 4/128 (3%) Query: 2 YWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 D+ A +L + E ++IL+V TR +GR + + +P+L +RV + Sbjct: 5 RISDEPAYVLHRYDWSESSLILDVFTRHHGRVALVAKGAKKPTSNFRPVLLPLQPLRVTY 64 Query: 59 RSRLAQNLGEFRFEV-LESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + + L GL L R L + L+D Sbjct: 65 TLNGEGREEVHGLKGAEWVGGHVMPTGDALLSGLYLNELLMRLLAREDTHAALFDAYAGV 124 Query: 118 LNCHKIPS 125 + Sbjct: 125 VRVLASEH 132 >gi|225027255|ref|ZP_03716447.1| hypothetical protein EUBHAL_01511 [Eubacterium hallii DSM 3353] gi|224955408|gb|EEG36617.1| hypothetical protein EUBHAL_01511 [Eubacterium hallii DSM 3353] Length = 245 Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 69/209 (33%), Gaps = 2/209 (0%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 I+L V GE + L ++T++ G+ F R + + L+ + +N Sbjct: 8 TGIVLSVYPVGENDRRLTILTKERGKIQVFARGSRRPKHPLFGVTQPLIYCEFMVTDTRN 67 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI--FLNCHKI 123 + + L +Y + + L FL K Sbjct: 68 YTYLNSAECKDYFYFLKKDLEDIYYSSYFAEVAEYFTMEGQDERNILNLLFVTFLAMKKK 127 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + I EL +L+ GFGL +CV G + L +S + GG +C + + Sbjct: 128 LISLSLIRRIYELKILQFAGFGLQSFQCVHCGNEEHLTRISFEEGGMLCSGCAVKGQGRE 187 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYF 212 + + + + +F L + Sbjct: 188 VESAVLYVLQYVSSIPLNRLYSFTLKENI 216 >gi|28410768|emb|CAD67154.1| DNA repair protein RecO [Tropheryma whipplei TW08/27] Length = 247 Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 73/210 (34%), Gaps = 5/210 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR 59 +++D AI+L + GE + I+ + TR G + + + + L+ ++ + Sbjct: 10 HYRDRAIVLRTKPLGEADRIITLFTRSNGTSDFVAKGIRRPKSRFGSSLEPFTVIDA-FL 68 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 G + E+L S+ ++L+ S+ I R L ++ +D+L+ + Sbjct: 69 YIGRGMDGVSQAEILASYGSRLVKSTESYIAANVIAETGRRLGIAGGSVQQFDLLHGAFS 128 Query: 120 CHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL- 177 I L + G+ L C + + +GG VC S Sbjct: 129 ALSRGISSPEAICSSYLLRSMSAAGWRPALENCAKCLLPLVEYTIDISAGGLVCTSCSEH 188 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQ 207 P L +E + + + Sbjct: 189 PVVNNKLCEYLLALREGDWPYINESDESLR 218 >gi|312143996|ref|YP_003995442.1| DNA repair protein RecO [Halanaerobium sp. 'sapolanicus'] gi|311904647|gb|ADQ15088.1| DNA repair protein RecO [Halanaerobium sp. 'sapolanicus'] Length = 255 Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats. Identities = 26/194 (13%), Positives = 59/194 (30%), Gaps = 3/194 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS-HRMQPILQAGNLVRVNWRSR 61 ++ +AI+L GE + ++ + T++ G+ R + ++ + L + Sbjct: 4 FETEAIVLKQFDLGESDRLITLYTKENGKVKAVARGARKGNKSRSGLVLPFSHHHFTLYK 63 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 E + + + + + R E E L+ +L + L Sbjct: 64 GRSLAKINHIESIAMNSKLREDLDYMAHASVAAEYIERAGLEFEADQALFSLLAVILEYM 123 Query: 122 KIPSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 +F E LL +G ++ C V G +L + Sbjct: 124 NKAEKNELLFYLTVFEAKLLLLLGVKPEIESCTVCGEKINLKGFTAVGVKEGGSICRECL 183 Query: 180 AEKMLVLPSFLWKE 193 ++ F + Sbjct: 184 SKAEFDYSDFSLNQ 197 >gi|288916968|ref|ZP_06411340.1| DNA repair protein RecO [Frankia sp. EUN1f] gi|288351677|gb|EFC85882.1| DNA repair protein RecO [Frankia sp. EUN1f] Length = 305 Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 71/178 (39%), Gaps = 6/178 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+ ++L + E + ++ V+TR+ GR + + S R L+ G V + Sbjct: 2 YRDEGVVLRTMPFAEADRVVTVLTRRNGRVRAVAKGVRRTSSRFGARLEPGTYVDLQLHE 61 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + + ++L ++ A + ++ L E L + Sbjct: 62 GRSLDT-VTQADILGAYGATIAQEYARYTAAAVMLETAERLTSEERQPAFRLFLLLVGGL 120 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + + ++ LL+++ G+G+ L +C + G + +S SGG VC Sbjct: 121 RTLAAGERTPSLVLDAFLLRSLTVSGYGMALDECALCGESGPHHSLSVASGGVVCPEC 178 >gi|78044245|ref|YP_359299.1| putative DNA repair protein RecO [Carboxydothermus hydrogenoformans Z-2901] gi|123576933|sp|Q3AEY5|RECO_CARHZ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|77996360|gb|ABB15259.1| putative DNA repair protein RecO [Carboxydothermus hydrogenoformans Z-2901] Length = 240 Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 62/195 (31%), Gaps = 2/195 (1%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQ 64 D+ I+L +G+ + +L ++T++ G+ + + + R N R + Sbjct: 6 DEGIVLKGSDFGDGHRMLTIITKELGKIKAVAYGAKKVKSKKRGALLEFSRTNIYLRQSN 65 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVP-LFRFLPEREPCLELYDMLNIFLNCHKI 123 + + L + L+ I RF P + +LY+ + L Sbjct: 66 DYFIVEQAEGIEYFPNLYGNKDLLHAAGQIAWLTDRFWPLGQLNPKLYNWVLYSLRLLNS 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVT-GVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + EL LL GF T C V + +W G + P Sbjct: 126 GVWPKIVLRNFELKLLAFTGFRPITTHCAVCRKPYRGEVWYFGAGEGGIVCPSCRPIEGI 185 Query: 183 MLVLPSFLWKEEQTI 197 + + K + Sbjct: 186 YFEIFPEVVKGMNAL 200 >gi|118618890|ref|YP_907222.1| DNA repair protein RecO [Mycobacterium ulcerans Agy99] gi|166221902|sp|A0PTT2|RECO_MYCUA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|118571000|gb|ABL05751.1| recombination protein O RecO [Mycobacterium ulcerans Agy99] Length = 265 Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 58/181 (32%), Gaps = 7/181 (3%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN 57 M ++D A++L GE + I+ ++TR +G + + + L+ + Sbjct: 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGSRLEPFAHIDAQ 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + +++ A +++ +++ L E Sbjct: 61 LHP-GRNLDIVTQVVSIDAFAADIVNDYGRYTCGCAMLETAERLAGEERAPAPALHRLTV 119 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + + ++ LL+ + G+ LT+C +GG+VC Sbjct: 120 GALRAVADGSRPRDLLLDAYLLRAMGIAGWVPALTECARCATPGPHRAFHIAAGGSVCPH 179 Query: 175 V 175 Sbjct: 180 C 180 >gi|300788452|ref|YP_003768743.1| DNA repair protein RecO [Amycolatopsis mediterranei U32] gi|299797966|gb|ADJ48341.1| DNA repair protein RecO [Amycolatopsis mediterranei U32] Length = 292 Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 64/179 (35%), Gaps = 4/179 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D ++L GE + I+ ++TR++G+ + + S R L+ V V + + Sbjct: 5 YRDTGVVLRTHKLGEADRIVTLLTRRHGKVRAVAKGVRRTSSRFGARLEPFGHVDVQFYT 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC-LELYDMLNIFLN 119 ++ V + + R E L+LY ++ L Sbjct: 65 GRTLDVITQVETVDAFQLPLVADYQSYTAASAIAETADRLSAEEGEPVLKLYLLVVGALR 124 Query: 120 CHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + L + G+ LT+C G+ S +GG++C+ + Sbjct: 125 ALADGTRDSSLVLDAFFLRAMSYAGWAPALTECARCGLPGPHTAFSVAAGGSMCQDCRI 183 >gi|149178097|ref|ZP_01856692.1| probable DNA repair protein recO [Planctomyces maris DSM 8797] gi|148843017|gb|EDL57385.1| probable DNA repair protein recO [Planctomyces maris DSM 8797] Length = 248 Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 53/156 (33%), Gaps = 3/156 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR 59 + + +++ + + E + ++ TR +G+ + + + + R+ + Sbjct: 3 NEKTEGVVIRLADFSESSKVITWFTRDFGKTAALAKGAKRLKSSFEAAIDLLATCRIVFI 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLNIFL 118 + + L L + S LY I L L E P ELYD L Sbjct: 63 RKSSGGLDILTEAQLVNRFRPYPGSLSNLYVGYYIAELLDALTEEYDPHPELYDAACEVL 122 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT 154 + K ++ EL +L+ IG C Sbjct: 123 RHLQEHDDFQKSLIKFELTILEEIGQLPQFEYCAGC 158 >gi|296454502|ref|YP_003661645.1| DNA repair protein RecO [Bifidobacterium longum subsp. longum JDM301] gi|296183933|gb|ADH00815.1| DNA repair protein RecO [Bifidobacterium longum subsp. longum JDM301] Length = 239 Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 54/160 (33%), Gaps = 4/160 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D+ ++L GE + I+ ++TR +G+ + + + + L+ V V Sbjct: 4 YRDEGVVLRTSKLGEADRIITILTRGHGKIRAVAKGVRRTKSRFGARLEPFMRVDVLIAE 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC-LELYDMLNIFLN 119 + ++ V + + + + + Y +L LN Sbjct: 64 GRSLDVVSQAEAVAAYGAPIAADYAAYEAANVIVETIDKLASTEHEQLTNQYRLLIGALN 123 Query: 120 CHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 S + I + L G+ L CVV G + Sbjct: 124 ALAKQSHAPQAIGDSYVMRALALAGWTPRLGTCVVCGKAE 163 >gi|296188180|ref|ZP_06856572.1| DNA repair protein RecO [Clostridium carboxidivorans P7] gi|296047306|gb|EFG86748.1| DNA repair protein RecO [Clostridium carboxidivorans P7] Length = 257 Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 19/194 (9%), Positives = 56/194 (28%), Gaps = 2/194 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RS 60 ++ A+++ + E + ++ + + + G+ + + + ++ Sbjct: 12 IFKTRAVVIKTQDIKESDKLVWLFSEKLGKISTIAKGSKKSSNKLFTSTLQFSYGDYVVY 71 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + ++S L Y + + + E EL+ +L Sbjct: 72 KGKSLYVINESTAIDSFQELLNDLDKLTYASYFCEIIDISMQDEESNRELFKLLITAFYF 131 Query: 121 HKIP-SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 K I + E+ L+ G+G +L C + + Sbjct: 132 LKNKVVDIEILARAFEIKALQATGYGFNLEHCCMCRKKINTSNYISFQYSGGVCQECAKV 191 Query: 180 AEKMLVLPSFLWKE 193 + P++ + Sbjct: 192 NGINVSYPAYNALK 205 >gi|169338088|ref|ZP_02622396.2| DNA repair protein RecO [Clostridium botulinum C str. Eklund] gi|169294393|gb|EDS76526.1| DNA repair protein RecO [Clostridium botulinum C str. Eklund] Length = 242 Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 3/171 (1%) Query: 10 LGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SRLAQNLGE 68 L + Y E + ++ + T + G+ + + ++ + + + R Sbjct: 2 LKTQDYKENDKLVWLFTEKIGKVCAIAKGAKKNKSKFMSSTQTFCFGEYVLFRGKSLYSI 61 Query: 69 FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH-KIPSVI 127 E+++S L YG + L + E EL+ + Sbjct: 62 NEVEIIDSFQNLLKDMDTITYGSYLCELILIALEQEESDRELFKDFIKSFYFLKNHAMDL 121 Query: 128 GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV-SPKSGGAVCRSVGL 177 + E LLK G+G D KC + G + S + G VC S Sbjct: 122 EILARTFEFKLLKATGYGFDFEKCCICGKRINKSNYLSIQYYGGVCDSCEK 172 >gi|300853997|ref|YP_003778981.1| putative DNA repair protein [Clostridium ljungdahlii DSM 13528] gi|300434112|gb|ADK13879.1| predicted DNA repair protein [Clostridium ljungdahlii DSM 13528] Length = 257 Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 21/158 (13%), Positives = 51/158 (32%), Gaps = 2/158 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RS 60 ++ A+I+ + E + ++ + T + G+ R +S + ++ Sbjct: 8 IFKTRAVIIKTQDIKESDKLVWLFTEKLGKIATIARGSKSSKNSLFSTTLQFCYGDYVVY 67 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + +++S L + Y + + E EL+ L Sbjct: 68 KGKNLYVINESSLIDSFQDLLNDLNDLTYASYFCELTDIAMNDGETSSELFRYLVTCFYL 127 Query: 121 H-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + + EL +L+ G+GL+ C + Sbjct: 128 IRSHGVDVETLARAFELKILQITGYGLNFDHCALCRKK 165 >gi|255525311|ref|ZP_05392251.1| DNA repair protein RecO [Clostridium carboxidivorans P7] gi|255510983|gb|EET87283.1| DNA repair protein RecO [Clostridium carboxidivorans P7] Length = 258 Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 19/194 (9%), Positives = 56/194 (28%), Gaps = 2/194 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RS 60 ++ A+++ + E + ++ + + + G+ + + + ++ Sbjct: 13 IFKTRAVVIKTQDIKESDKLVWLFSEKLGKISTIAKGSKKSSNKLFTSTLQFSYGDYVVY 72 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + ++S L Y + + + E EL+ +L Sbjct: 73 KGKSLYVINESTAIDSFQELLNDLDKLTYASYFCEIIDISMQDEESNRELFKLLITAFYF 132 Query: 121 HKIP-SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 K I + E+ L+ G+G +L C + + Sbjct: 133 LKNKVVDIEILARAFEIKALQATGYGFNLEHCCMCRKKINTSNYISFQYSGGVCQECAKV 192 Query: 180 AEKMLVLPSFLWKE 193 + P++ + Sbjct: 193 NGINVSYPAYNALK 206 >gi|300858945|ref|YP_003783928.1| DNA repair protein [Corynebacterium pseudotuberculosis FRC41] gi|300686399|gb|ADK29321.1| DNA repair protein [Corynebacterium pseudotuberculosis FRC41] gi|302206646|gb|ADL10988.1| DNA repair protein [Corynebacterium pseudotuberculosis C231] gi|302331195|gb|ADL21389.1| DNA repair protein [Corynebacterium pseudotuberculosis 1002] gi|308276889|gb|ADO26788.1| DNA repair protein [Corynebacterium pseudotuberculosis I19] Length = 242 Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 60/176 (34%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 +++ A+++ +GE + I+ ++TR G + + + + + V ++ + + Sbjct: 6 YRERALVVRTYDFGEADRIVVLLTRGRGIVRAVAKGVRRAKSRFGSRLQPFVELDVQLYV 65 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + L ++ L Y +V +L+D+ L + Sbjct: 66 GRTLDSITAADTVAYFGSQLIDDPTRYAAACVVLESVEKMSIGAEPQLFDLAVEALQGLQ 125 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + L + G+ L C G + P +GGAVC P Sbjct: 126 TTAQPLYDVDAFLLQAMNCAGWAPSLFDCAQCGASGPHHAFHPVAGGAVCVHCRPP 181 >gi|305681524|ref|ZP_07404331.1| DNA repair protein RecO [Corynebacterium matruchotii ATCC 14266] gi|305659729|gb|EFM49229.1| DNA repair protein RecO [Corynebacterium matruchotii ATCC 14266] Length = 263 Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 57/179 (31%), Gaps = 3/179 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 +++ A+++ GE + I+ +T+ G G + + R + LQ + V + Sbjct: 6 YRERALVIRTYDLGEADRIIVFLTQHRGLVRGVAKGVRRARSRFGSRLQPFVELDVQFYV 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 V + + + + + R L E LY ++ L Sbjct: 66 GRELESVTAADTVGFYGSGIIDNITCYTAASAVLEAAERLSLAHDEHDDRLYPLVVDTLK 125 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + L + G+ L C P++GGAVC + P Sbjct: 126 QLQHAPEPKLRLDTFLLQAMTVAGWAPSLYYCAQCQAPGPHHAFHPRTGGAVCGTCRPP 184 >gi|193214068|ref|YP_001995267.1| DNA repair protein RecO [Chloroherpeton thalassium ATCC 35110] gi|254790516|sp|B3QU22|RECO_CHLT3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|193087545|gb|ACF12820.1| DNA repair protein RecO [Chloroherpeton thalassium ATCC 35110] Length = 259 Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 70/160 (43%), Gaps = 4/160 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M + AI+L +YG+++ I+ TR +G+ G V+ ++ + + +L+ GN + + Sbjct: 1 MIRKTQAIVLRTINYGDQSKIVTFFTRSFGKLTGLVKGYRNPKGKFASVLEIGNDLDLVL 60 Query: 59 RSRLAQNLGEFRFEVLES-HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + + VL + S Q++ + + L ++++L+ Sbjct: 61 YKKDTREVQLITEAVLRAPMLGATSSLEQLSALHQTLELIRLTTENDDAHLGVFELLHAT 120 Query: 118 LNCHKI-PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 L + F ++ L+ +GF L+ KCV+TG Sbjct: 121 LQKINVSRKNHISFFFYFQVQLISLLGFRLNFQKCVLTGK 160 >gi|118581288|ref|YP_902538.1| DNA repair protein RecO [Pelobacter propionicus DSM 2379] gi|166221903|sp|A1AT10|RECO_PELPD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|118503998|gb|ABL00481.1| DNA replication and repair protein RecO [Pelobacter propionicus DSM 2379] Length = 246 Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 53/156 (33%), Gaps = 2/156 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHL--GFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 A +L YG+ + I+ + T ++GR R L+ + + + Sbjct: 7 QAYVLSTLDYGDSDRIVALFTLEHGRIKAFARRARNSRRRFGAALEIFARIEAHVEIKQG 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 G + E+ + Y L + + PE P L+ +L +L+ + Sbjct: 67 GLSGLRQAEIDCIYPGIRGDLGRIAYALYACELVDAMTPEGHPLPRLFRLLAAYLDRLEA 126 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 + E+ LL +G+ L C G D Sbjct: 127 YPASEQERRFFEINLLNILGYRPSLEACSRCGTPFD 162 >gi|256375393|ref|YP_003099053.1| DNA repair protein RecO [Actinosynnema mirum DSM 43827] gi|255919696|gb|ACU35207.1| DNA repair protein RecO [Actinosynnema mirum DSM 43827] Length = 250 Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 70/183 (38%), Gaps = 6/183 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D ++L V+ GE + I+ ++T+++G+ + + S R L+ V + Sbjct: 5 YRDTGVVLRVQKLGEADRIITLLTQRHGKLRAVAKGVRRTSSRFGARLEPFGHVDAQFHP 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 ++ + E +++ L+ +++ L E L L + Sbjct: 65 GRTLDV-ITQVETIDAFGVVLVDDYQRYTAGCAVLETADRLTSEEGAPALRLYLLVTGAL 123 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + ++ LL+ + G+ + +C G + ++GG VC + Sbjct: 124 RALADGRRDPSLLLDAFLLRAMAFAGWAPAVGECARCGEPGPHRSFNVQAGGVVCANCRP 183 Query: 178 PYA 180 P + Sbjct: 184 PGS 186 >gi|310287054|ref|YP_003938312.1| DNA repair protein RecO [Bifidobacterium bifidum S17] gi|309250990|gb|ADO52738.1| DNA repair protein RecO [Bifidobacterium bifidum S17] Length = 260 Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 53/159 (33%), Gaps = 8/159 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D+ ++L GE + I+ ++TR +G+ + + + + L+ V V + Sbjct: 4 YRDEGVVLRTAKLGEADRIVTLLTRSHGKIRAVAKGVRRVKSRFGGRLEPFMRVDVLIAT 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCL-ELYDMLNIFLN 119 ++ + + + + + Y +L LN Sbjct: 64 GRTLDVVSQAESISAYAAPICADYGAYGIANVMVETADKLVSAEGERAVAQYRLLVGGLN 123 Query: 120 CHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTG 155 + E +L+ + G+ L CVV G Sbjct: 124 ALARHAHPATA--IGESYVLRALALAGWTPRLHSCVVCG 160 >gi|227503134|ref|ZP_03933183.1| DNA repair protein RecO [Corynebacterium accolens ATCC 49725] gi|306836627|ref|ZP_07469593.1| recombination protein O [Corynebacterium accolens ATCC 49726] gi|227076195|gb|EEI14158.1| DNA repair protein RecO [Corynebacterium accolens ATCC 49725] gi|304567457|gb|EFM43056.1| recombination protein O [Corynebacterium accolens ATCC 49726] Length = 238 Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 26/206 (12%), Positives = 60/206 (29%), Gaps = 7/206 (3%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR 59 ++D A+++ +GE + ++ ++T+ +G + + + + LQ + V Sbjct: 4 NYRDRAVVIRSYDFGEADRVIVLLTQNHGLVRAVAKGVRRAKSRFGSRLQLFVNLDVQLY 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER-EPCLELYDMLNIFL 118 V + + + R + + LY+ + L Sbjct: 64 VGKNLATISQADTVNYFGARLIEDYERYTAACAVLESAERLIYADGDGDPYLYNAVVATL 123 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + + G+ L C P GGA C P Sbjct: 124 EHLQTEEPTQTLDAFLLQAMAHA-GWAPSLFDCAQCQRPGPHHAFHPAVGGAACHECRPP 182 Query: 179 YA---EKMLVLPSFLWKEEQTIDADS 201 A + + +L D + Sbjct: 183 GAAEVDPETLHHLWLLAHGYPTDPTN 208 >gi|171057287|ref|YP_001789636.1| DNA repair protein RecO [Leptothrix cholodnii SP-6] gi|170774732|gb|ACB32871.1| DNA repair protein RecO [Leptothrix cholodnii SP-6] Length = 256 Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 54/148 (36%), Gaps = 6/148 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRL-- 62 A +L + E ++ILE+ TR+ GR + + +++ +L + + S+ Sbjct: 13 AYVLHHHDWSESSLILELFTRELGRISAVAKGAKRPYSQLRCVLLPFQRLNIALGSKRIE 72 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + + + L G+ L R L ++P L+D L Sbjct: 73 DGAEVQLLRSAEWAGGGAMPGGAALLAGMHLNEILLRGLARQDPHPHLFDAYAATLPALS 132 Query: 123 IPSV--IGKIFVQIELMLLKNIGFGLDL 148 P + E+ LL + G +L Sbjct: 133 GPDDAGVAAALRAFEIRLLSDSGVLPEL 160 >gi|170720261|ref|YP_001747949.1| DNA repair protein RecO [Pseudomonas putida W619] gi|229485560|sp|B1J4E2|RECO_PSEPW RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|169758264|gb|ACA71580.1| DNA repair protein RecO [Pseudomonas putida W619] Length = 227 Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 78/232 (33%), Gaps = 14/232 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R+Y E + +++ T GR +R + + +++ + V R R Sbjct: 8 PAYVLHSRAYKETSALVDFFTP-QGRVRAVLRRARG-KGGSLVRPFVPLEVELRGRSELK 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + A L GL L R LP P EL++ + L Sbjct: 66 NVGRLDSM---GIAAWLHGDALFSGLYLNELLMRLLPAEAPQPELFEHYALTLQALAAGR 122 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + + E LL+++G+ L V + + + R + + Sbjct: 123 PLEPLLRSFEWRLLEDLGYAFALDHDVSDEPIEADGLYRLQVDAGLERVYLVQ--PGLFN 180 Query: 186 LPSFLWKEEQTID-ADSLKSAFQLTDYFLNKYALQHNIIHCHL-LRENFLGK 235 L + D +L +A + L + AL ++ L RE F + Sbjct: 181 GAELLALAQADWDAPGALLAAKR-----LMRQALAVHLGPKPLVSRELFRKR 227 >gi|194337771|ref|YP_002019565.1| DNA repair protein RecO [Pelodictyon phaeoclathratiforme BU-1] gi|238693422|sp|B4SGW0|RECO_PELPB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|194310248|gb|ACF44948.1| DNA repair protein RecO [Pelodictyon phaeoclathratiforme BU-1] Length = 261 Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 61/159 (38%), Gaps = 4/159 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M + A+IL Y +++ I + TR++G+ ++ ++ + + + AGN+V + Sbjct: 1 MIVKTRAVILREIKYRDQSKICSIYTREFGKMSIIIKGARNPKNRLSGLFSAGNVVDLVL 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIF 117 + ++++ L L I+ R E L L+ +L Sbjct: 61 YKKSSRDIQLATDGNLVLSPMVPEPDLERFAILYRIIDFVRHTTENDEKNLPLFTLLTGT 120 Query: 118 LNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 L +++ L + +GF L CV +G Sbjct: 121 LEQLYHTNVNFQQLYAWFLLRFVSLLGFQPSLRTCVFSG 159 >gi|154498353|ref|ZP_02036731.1| hypothetical protein BACCAP_02342 [Bacteroides capillosus ATCC 29799] gi|150272664|gb|EDM99842.1| hypothetical protein BACCAP_02342 [Bacteroides capillosus ATCC 29799] Length = 252 Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 47/161 (29%), Gaps = 4/161 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNW 58 M+ I+L +Y E + IL V+TR G+ R + Q + Sbjct: 1 MHLTTQGIVLREVNYKESDKILTVLTRDLGKLTVKARACRRKNSPLAAASQLLVYSELTL 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + LE G + E P L ++ L Sbjct: 61 FEYRDYWSMDQGDS-LEQFWGVRQDVEKLALGSYFAEVMETVAEEGRPDPALLSLILNSL 119 Query: 119 NCHKIPSVI-GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 S + EL LL +G+ L C V GV + Sbjct: 120 YALDKLSKPLPLVKAAYELKLLSLVGYEPMLDACAVCGVPE 160 >gi|227892550|ref|ZP_04010355.1| recombination protein O [Lactobacillus ultunensis DSM 16047] gi|227865671|gb|EEJ73092.1| recombination protein O [Lactobacillus ultunensis DSM 16047] Length = 250 Score = 81.4 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 64/185 (34%), Gaps = 2/185 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 II + Y E +++ ++MT+Q G V+ + + N + + + Sbjct: 9 QGIIFKRQKYKEADLLAKIMTKQDGIITLIVKGALRPKSRLSAATLNFSTGTYIIYTSGH 68 Query: 66 --LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ ++ + Y + E +P + Y++ LN Sbjct: 69 GLSNLRTYKEVKQFDGLYHDLTKNAYASFIFDLIDHAFVEYQPIGKYYNLALFALNKIDK 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I +++ +L G +L CV+ G + + S K GG VC +M Sbjct: 129 GVDSEMITQIVQMKMLSAYGVEPELRHCVICGKEKGVFDYSIKLGGIVCSDHFGVVNSRM 188 Query: 184 LVLPS 188 + P Sbjct: 189 HLKPK 193 >gi|206890233|ref|YP_002248192.1| DNA repair protein RecO [Thermodesulfovibrio yellowstonii DSM 11347] gi|254790739|sp|B5YIN3|RECO_THEYD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|206742171|gb|ACI21228.1| DNA repair protein RecO [Thermodesulfovibrio yellowstonii DSM 11347] Length = 250 Score = 81.4 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 81/217 (37%), Gaps = 7/217 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M++ +AI+L YGE ++I+ +T+ YG F ++ + + + L+ ++++ Sbjct: 1 MHYSTEAIVLKNIPYGEADLIVTYLTKNYGLLNLFAKSPRKIKSRFGSSLEPLTYSQISF 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + + +++ + LFL ++ L + LP++EP EL+ +L L Sbjct: 61 IGKEDNLQKIIQSDIIHPFQTIRENYRLFLQIANALRFLIQALPKKEPNSELFYLLLNTL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + +++ L +G+ D C V Q+L S G + Sbjct: 121 LYLEKRIKPDNYILFLKVRGLSILGYLPDFKNCGVC--RQELKEEFYYSSGFIICKKCSS 178 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNK 215 + + T FL + Sbjct: 179 SYHYSSSALPIPISQGVIKLLKEIS---TWTLNFLER 212 >gi|254819382|ref|ZP_05224383.1| DNA repair protein RecO [Mycobacterium intracellulare ATCC 13950] Length = 265 Score = 81.4 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 23/181 (12%), Positives = 56/181 (30%), Gaps = 7/181 (3%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN 57 M ++D A++L GE + I+ ++TR +G + + + L+ + Sbjct: 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDAQ 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + +++ ++S +++ L E Sbjct: 61 LHP-GRNLDIVTQVVSIDAFATDIVSDYGRYTCGCAMLETAERLAGEERAPAPALHGLTV 119 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + + ++ LL+ + G+ L +C +GG+VC Sbjct: 120 SALRAVADGRRSRGLLLDAYLLRAMGIAGWAPALNECARCATPGPHRAFHVGAGGSVCTH 179 Query: 175 V 175 Sbjct: 180 C 180 >gi|326692994|ref|ZP_08229999.1| DNA repair protein RecO [Leuconostoc argentinum KCTC 3773] Length = 263 Score = 81.4 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 67/236 (28%), Gaps = 17/236 (7%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS---RLA 63 I+L R Y + ++++ ++T G R + + +++ + Sbjct: 6 GIVLYTRQYKDHDLLVRMLTENDGLRTFLARGAKKPKSTLSAAVQPFTILSFEGALPKRH 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC-LELYDMLNIFLNCHK 122 LG + +L+ I L E Y + L + Sbjct: 66 TGLGYINDAQQANLYPRLIDDIEANAYAALIASLIDQSYEEGEPLTRWYHQFELALQKLE 125 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 I E+ LL +G + ++G S K G + + Sbjct: 126 AGLDPQVIANIFEIQLLVPLGVAPNWRADPISGQVTGRFDYSEKYNGILAEEHYDLDEHR 185 Query: 183 MLVLPS--FLWKEEQTIDADSLKS---------AF-QLTDYFLNKYA-LQHNIIHC 225 +++ F ++ ID + ++ D+ +K L+ Sbjct: 186 LMLDQKTIFYLRQFSVIDLRQINQINLSPVTKRGLQRVIDHIYDKQVGLKPRAKTF 241 >gi|262196745|ref|YP_003267954.1| DNA repair protein RecO [Haliangium ochraceum DSM 14365] gi|262080092|gb|ACY16061.1| DNA repair protein RecO [Haliangium ochraceum DSM 14365] Length = 275 Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 57/160 (35%), Gaps = 3/160 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW- 58 + +IL YG+ ++I+ + TR +GR R + + + L L V Sbjct: 5 QVASEGVILRAVPYGDADLIVTLYTRDFGRLSALGRAARKSKRRFGGALDMFTLSEVALR 64 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R+R ++ + S+ A L F + + P P L ++L Sbjct: 65 RARSSELWTLESAQPRRSYSALALDVGTFAHASYGTELVRELSPVEAPDEPLLELLLALY 124 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 + ++ EL LL +G L +C G + Sbjct: 125 EELERDGAHAQVLRAFELALLDALGMAPVLDRCAACGRSD 164 >gi|311063922|ref|YP_003970647.1| DNA repair protein RecO [Bifidobacterium bifidum PRL2010] gi|310866241|gb|ADP35610.1| RecO DNA repair protein [Bifidobacterium bifidum PRL2010] Length = 260 Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 53/159 (33%), Gaps = 8/159 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D+ ++L GE + I+ ++TR +G+ + + + + L+ V V + Sbjct: 4 YRDEGVVLRTAKLGEADRIVTLLTRSHGKVRAVAKGVRRVKSRFGGRLEPFMRVDVLIAT 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCL-ELYDMLNIFLN 119 ++ + + + + + Y +L LN Sbjct: 64 GRTLDVVSQVESISAYAAPICADYGAYGIANVMVETADKLVSAEGERAVAQYRLLVGGLN 123 Query: 120 CHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTG 155 + E +L+ + G+ L CVV G Sbjct: 124 ALARHAHPATA--IGESYVLRALALAGWTPRLHSCVVCG 160 >gi|224282594|ref|ZP_03645916.1| DNA repair protein RecO [Bifidobacterium bifidum NCIMB 41171] gi|313139752|ref|ZP_07801945.1| DNA repair protein RecO [Bifidobacterium bifidum NCIMB 41171] gi|313132262|gb|EFR49879.1| DNA repair protein RecO [Bifidobacterium bifidum NCIMB 41171] Length = 260 Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 53/159 (33%), Gaps = 8/159 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D+ ++L GE + I+ ++TR +G+ + + + + L+ V V + Sbjct: 4 YRDEGVVLRTAKLGEADRIVTLLTRSHGKVRAVAKGVRRVKSRFGGRLEPFMRVDVLIAT 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCL-ELYDMLNIFLN 119 ++ + + + + + Y +L LN Sbjct: 64 GRTLDVVSQVESISAYAAPICADYGAYGIANVMVETADKLVSAEGERAVAQYRLLVGGLN 123 Query: 120 CHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTG 155 + E +L+ + G+ L CVV G Sbjct: 124 ALARHAHPATA--IGESYVLRALALAGWTPRLHSCVVCG 160 >gi|15674265|ref|NP_268438.1| DNA repair protein RecO [Streptococcus pyogenes M1 GAS] gi|19745216|ref|NP_606352.1| DNA repair protein RecO [Streptococcus pyogenes MGAS8232] gi|28894929|ref|NP_801279.1| DNA repair protein RecO [Streptococcus pyogenes SSI-1] gi|50913365|ref|YP_059337.1| DNA repair protein RecO [Streptococcus pyogenes MGAS10394] gi|56808893|ref|ZP_00366603.1| COG1381: Recombinational DNA repair protein (RecF pathway) [Streptococcus pyogenes M49 591] gi|71902685|ref|YP_279488.1| DNA repair protein RecO [Streptococcus pyogenes MGAS6180] gi|71909833|ref|YP_281383.1| DNA repair protein RecO [Streptococcus pyogenes MGAS5005] gi|94987650|ref|YP_595751.1| DNA repair protein RecO [Streptococcus pyogenes MGAS9429] gi|94989528|ref|YP_597628.1| DNA repair protein RecO [Streptococcus pyogenes MGAS10270] gi|94991517|ref|YP_599616.1| DNA repair protein RecO [Streptococcus pyogenes MGAS2096] gi|94993415|ref|YP_601513.1| DNA repair protein RecO [Streptococcus pyogenes MGAS10750] gi|139472905|ref|YP_001127620.1| DNA repair protein RecO [Streptococcus pyogenes str. Manfredo] gi|161485758|ref|NP_663820.2| DNA repair protein RecO [Streptococcus pyogenes MGAS315] gi|209558603|ref|YP_002285075.1| DNA repair protein RecO [Streptococcus pyogenes NZ131] gi|306828288|ref|ZP_07461544.1| recombination protein O [Streptococcus pyogenes ATCC 10782] gi|54039037|sp|P65988|RECO_STRP3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|54039038|sp|P65989|RECO_STRP8 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|54041797|sp|P65987|RECO_STRP1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|61214792|sp|Q5XEK9|RECO_STRP6 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|92087037|sp|Q48VX9|RECO_STRPM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361489|sp|Q1JE86|RECO_STRPB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361490|sp|Q1JP42|RECO_STRPC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361491|sp|Q1JJ89|RECO_STRPD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361492|sp|Q1J942|RECO_STRPF RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166221912|sp|A2RBY9|RECO_STRPG RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238058648|sp|B5XJ12|RECO_STRPZ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|13621343|gb|AAK33160.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS] gi|19747307|gb|AAL96851.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232] gi|28810174|dbj|BAC63112.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1] gi|50902439|gb|AAT86154.1| RecO [Streptococcus pyogenes MGAS10394] gi|71801780|gb|AAX71133.1| DNA repair protein [Streptococcus pyogenes MGAS6180] gi|71852615|gb|AAZ50638.1| DNA repair protein [Streptococcus pyogenes MGAS5005] gi|94541158|gb|ABF31207.1| DNA repair protein [Streptococcus pyogenes MGAS9429] gi|94543036|gb|ABF33084.1| DNA repair protein recO [Streptococcus pyogenes MGAS10270] gi|94545025|gb|ABF35072.1| DNA repair protein recO [Streptococcus pyogenes MGAS2096] gi|94546923|gb|ABF36969.1| DNA repair protein recO [Streptococcus pyogenes MGAS10750] gi|134271151|emb|CAM29361.1| DNA repair protein RecO [Streptococcus pyogenes str. Manfredo] gi|209539804|gb|ACI60380.1| DNA repair protein recO [Streptococcus pyogenes NZ131] gi|304429518|gb|EFM32571.1| recombination protein O [Streptococcus pyogenes ATCC 10782] Length = 251 Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 71/199 (35%), Gaps = 2/199 (1%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 I+L R+Y E + ++++ T G+ + FV++ +M I+Q + ++ Sbjct: 8 GIVLFNRNYREDDKLVKIFTEVAGKQMFFVKHISRSKMSSIIQPLTIADFIFKLNDTGLS 67 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 + + ++ Y + + + E L+ L L+ + Sbjct: 68 YVVDYSNVNTYRYINNDIFRLAYASYVLALADAAIADNESDSHLFTFLKKTLDLMEEGLD 127 Query: 127 IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVL 186 + E+ +L G L+ +C + T L S + +C + + Sbjct: 128 YEILTNIFEIQILDRFGISLNFHECAICHRTDLPLDFSHRFSAVLCSEHYYKDNRRNHLD 187 Query: 187 PS--FLWKEEQTIDADSLK 203 P+ +L Q I D L+ Sbjct: 188 PNVIYLLSRFQKITFDDLR 206 >gi|260578245|ref|ZP_05846161.1| DNA repair protein RecO (recombination protein O) [Corynebacterium jeikeium ATCC 43734] gi|258603547|gb|EEW16808.1| DNA repair protein RecO (recombination protein O) [Corynebacterium jeikeium ATCC 43734] Length = 253 Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 58/183 (31%), Gaps = 7/183 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D+A +L GE ++IL ++T+ G + + R + L + V V Sbjct: 9 FRDEAFVLRTYKLGEADLILVLLTKDNGLIRAVAKGIRKTRSRFGARLDRFSCVDVQIYP 68 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + V + F G + F E ++ +L+ L Sbjct: 69 GRSLANVTDAATVATYASPIVADVDRFYAGAAMLEMAQVFAAEPSSARSIFFLLDAALQQ 128 Query: 121 HKIPSVIGKIFVQ-----IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + L L+ G+ L C G P +GGAVC + Sbjct: 129 LATQLTTPALPPVSVADEFVLHGLEVAGWEPSLVDCAQCGKRGPHRAFHPGAGGAVCVTC 188 Query: 176 GLP 178 P Sbjct: 189 RPP 191 >gi|153953551|ref|YP_001394316.1| DNA repair protein RecO [Clostridium kluyveri DSM 555] gi|219854173|ref|YP_002471295.1| hypothetical protein CKR_0830 [Clostridium kluyveri NBRC 12016] gi|189039652|sp|A5N6N7|RECO_CLOK5 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254790517|sp|B9E056|RECO_CLOK1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|146346432|gb|EDK32968.1| RecO [Clostridium kluyveri DSM 555] gi|219567897|dbj|BAH05881.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 257 Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 28/206 (13%), Positives = 65/206 (31%), Gaps = 3/206 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RS 60 ++ AII+ + E + ++ + T + G+ + + R ++ Sbjct: 8 IFKTRAIIIKTQDIKESDKLVWLFTEKLGKISTIAKGSKKSRSPLFSTTLQFCYGDYVVY 67 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + +++S L + Y + + E EL+ L Sbjct: 68 KGKSLYVINESSLIDSFQHLLNDLNDLTYASYFCELTDIAMDDGESSRELFRYLATSFYL 127 Query: 121 H-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT-GVTQDLLWVSPKSGGAVCRSVGLP 178 I + EL +LK G+GL+ C + ++ + G +CR Sbjct: 128 IRSHAVDIETLARTFELKILKTTGYGLNFDYCALCRKKITSFEYLHLQYLGGICRECDKE 187 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKS 204 + + K +I +++ Sbjct: 188 NSMHISYSTCSALKYLSSISMENVYK 213 >gi|114775463|ref|ZP_01451031.1| DNA repair protein RecO [Mariprofundus ferrooxydans PV-1] gi|114553574|gb|EAU55955.1| DNA repair protein RecO [Mariprofundus ferrooxydans PV-1] Length = 228 Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 53/152 (34%), Gaps = 9/152 (5%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 DD ++L + E ++I ++T +GR R + + + L + + WR Sbjct: 3 EISDDGLLLRRIPFSETSLICHILTAGHGRITVMARGARRPKSIFRATLAPLYRLHITWR 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + S +L+ S L L+ I + +P Y L+ L+ Sbjct: 63 PGRSG----MGTLTDISRGEQLVDESRMLPALELIAVSSTLFQDGDPHG--YHELHEALS 116 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKC 151 ++L+ G+ DL+ C Sbjct: 117 LLADRHADEG-QCAALWLMLERAGWLGDLSHC 147 >gi|317504156|ref|ZP_07962155.1| recombination protein O [Prevotella salivae DSM 15606] gi|315664732|gb|EFV04400.1| recombination protein O [Prevotella salivae DSM 15606] Length = 240 Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 48/156 (30%), Gaps = 5/156 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + AI+L +GE ++++V T Q GR VR S + + Q +++ + Sbjct: 1 MLMKTKAIVLHAFKFGENKLMVDVFTEQQGRISFAVRIVNSPKAKIKKQYFQPFSVLEIE 60 Query: 58 WRSRLA-QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R + + + L++ + Sbjct: 61 YDYRQKTNIQTFNNVGIAYPFGSIPFEPLKLSICFFLAELTSYATHGEQENTHLFNYIVS 120 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKC 151 + F + LL+ +GF +L Sbjct: 121 SIEWLDRCDTGFSNFHLVYIVHLLRFLGFYPNLEDY 156 >gi|108800416|ref|YP_640613.1| DNA repair protein RecO [Mycobacterium sp. MCS] gi|119869545|ref|YP_939497.1| DNA repair protein RecO [Mycobacterium sp. KMS] gi|126436039|ref|YP_001071730.1| DNA repair protein RecO [Mycobacterium sp. JLS] gi|119361466|sp|Q1B6C7|RECO_MYCSS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166221899|sp|A3Q262|RECO_MYCSJ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166221900|sp|A1UIP9|RECO_MYCSK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|108770835|gb|ABG09557.1| DNA replication and repair protein RecO [Mycobacterium sp. MCS] gi|119695634|gb|ABL92707.1| DNA replication and repair protein RecO [Mycobacterium sp. KMS] gi|126235839|gb|ABN99239.1| DNA replication and repair protein RecO [Mycobacterium sp. JLS] Length = 276 Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 25/181 (13%), Positives = 60/181 (33%), Gaps = 7/181 (3%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN 57 M ++D A++L GE + I+ ++TR +G + + + L+ + V Sbjct: 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDVQ 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + +++ + ++S +++ L E Sbjct: 61 LHP-GRNLDIVTQVQAIDAFASDIVSDYGRYTSACAVLETAERLAGEERAPMPALHRLTV 119 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + + ++ LL+ + G+ LT+C +GG+VC Sbjct: 120 GALRAVADGSRPRELVLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHVAAGGSVCVH 179 Query: 175 V 175 Sbjct: 180 C 180 >gi|28476293|gb|AAO44382.1| DNA repair protein [Tropheryma whipplei str. Twist] Length = 261 Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 73/210 (34%), Gaps = 5/210 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR 59 +++D AI+L + GE + I+ + TR G + + + + L+ ++ + Sbjct: 24 HYRDRAIVLRTKPLGEADRIITLFTRSNGTSDFVAKGIRRPKSRFGSSLEPFTVIDA-FL 82 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 G + E+L S+ ++L+ S+ I R L ++ +D+L+ + Sbjct: 83 YIGRGMDGVSQAEILASYGSRLVKSTESYIAANVIAETGRRLGIAGGSVQQFDLLHGAFS 142 Query: 120 CHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL- 177 I L + G+ L C + + +GG VC S Sbjct: 143 ALSRGISSPEAICSSYLLRSMSAAGWRPALENCAKCLLPLVEYTIDISAGGLVCTSCSEH 202 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQ 207 P L +E + + + Sbjct: 203 PVVNNKLCEYLLALREGDWPYINESDESLR 232 >gi|325269653|ref|ZP_08136266.1| recombination protein O [Prevotella multiformis DSM 16608] gi|324988021|gb|EGC19991.1| recombination protein O [Prevotella multiformis DSM 16608] Length = 242 Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 53/156 (33%), Gaps = 5/156 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGF---VRNGQSHRMQPILQAGNLVRVN 57 M + AI+L +G+ ++I+++ T Q GR ++ + + Q L+ ++ Sbjct: 1 MIQKSKAIVLRSLKFGDTSLIVDMFTEQEGRISFITHVAKSAKGKVKKQFFQPLTLLELS 60 Query: 58 WRSRLAQNLGEFRFEVL-ESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R L R + + + + L L + + LY + Sbjct: 61 FDYRQRVTLQRIRDVRILRPYGSIPFDPAKSAVLLFLSEFLSYVTRGEQQNVHLYHYVQT 120 Query: 117 FLNCHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKC 151 + + + L + IGF +L Sbjct: 121 SMEWLDEAVQGYANFHLVFMMRLSRFIGFFPNLEDY 156 >gi|145220483|ref|YP_001131192.1| DNA repair protein RecO [Prosthecochloris vibrioformis DSM 265] gi|145206647|gb|ABP37690.1| DNA replication and repair protein RecO [Chlorobium phaeovibrioides DSM 265] Length = 276 Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 61/160 (38%), Gaps = 4/160 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR 59 + A++L Y +++ + + TR++G+ ++ G++ + + I AGNL+ Sbjct: 16 IVKTRAVVLREIKYRDQSKLCTLFTREFGKLTVILKGGRNPKNRLSGIFTAGNLLDCVMY 75 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQ-SIVPLFRFLPEREPCLELYDMLNIFL 118 + + + L + + L I + R E L+L+ +L L Sbjct: 76 RKAEREVQLLSDASLLASPMFPEADMERFGALYRMIDLVNRTTERDEKNLQLFTLLETAL 135 Query: 119 NCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 ++ L + +GF +L CV TG Sbjct: 136 REICRERGNFPLLYAWFLLRFISILGFEPELRSCVFTGRN 175 >gi|311742976|ref|ZP_07716784.1| recombination protein O [Aeromicrobium marinum DSM 15272] gi|311313656|gb|EFQ83565.1| recombination protein O [Aeromicrobium marinum DSM 15272] Length = 262 Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 68/205 (33%), Gaps = 6/205 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++D ++L GE + I+ ++TR++G+ + + R+ ++ V V + Sbjct: 24 YRDVGVVLRTHKLGEADRIITLLTREHGQVRAVAKGVRKTTSRLGGRVEPFMHVDVQFAV 83 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDMLNIFL 118 ++ + L + +++ L + + Y +L L Sbjct: 84 GRTLDIVTQVET-ITPFAQHLGADYGAYTAGTAMLETAERLVDDGGEPAVQQYQLLVGAL 142 Query: 119 NCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + G I +L L G+ C G SGG +C + + Sbjct: 143 RALTEGRHNPGMILDSYQLRALAIAGYAPSFGLCARCGAPGPHRNFHAPSGGILCDTCRM 202 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSL 202 P + L + D +++ Sbjct: 203 PGSAAPSPSAVTLLAALLSGDWETV 227 >gi|184155317|ref|YP_001843657.1| DNA repair protein RecO [Lactobacillus fermentum IFO 3956] gi|227514584|ref|ZP_03944633.1| recombination protein O [Lactobacillus fermentum ATCC 14931] gi|260662169|ref|ZP_05863065.1| DNA repair protein RecO [Lactobacillus fermentum 28-3-CHN] gi|238692972|sp|B2GBZ5|RECO_LACF3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|183226661|dbj|BAG27177.1| DNA repair protein RecO [Lactobacillus fermentum IFO 3956] gi|227086995|gb|EEI22307.1| recombination protein O [Lactobacillus fermentum ATCC 14931] gi|260553552|gb|EEX26444.1| DNA repair protein RecO [Lactobacillus fermentum 28-3-CHN] Length = 272 Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 60/185 (32%), Gaps = 2/185 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSRLA 63 + +I+ R Y E++++++++T + G + FVR + ++ + Sbjct: 9 EGVIMYRRDYRERDLLVKILTDRRGPLMFFVRGAKRKGFKLASDILPFTYGSYVGILADE 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + Y + + + E Y + LN Sbjct: 69 GLSYIVSAQETHHLTGIGADLNRNAYATYLLELVDQAFEEGRALGGWYKQVMAALNLINT 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + +E+ LL G +CVV G + L S K GG +C + Sbjct: 129 GRDPQVVVNVLEVQLLNRFGIAPVWDRCVVCGRSDLPLDYSEKMGGMLCLHHFAEDPYRF 188 Query: 184 LVLPS 188 + P Sbjct: 189 HLTPK 193 >gi|226226896|ref|YP_002761002.1| DNA repair protein RecO [Gemmatimonas aurantiaca T-27] gi|226090087|dbj|BAH38532.1| DNA repair protein RecO [Gemmatimonas aurantiaca T-27] Length = 249 Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 45/227 (19%), Positives = 82/227 (36%), Gaps = 14/227 (6%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRL 62 DAI+L V Y E + IL ++TR+ G R +S R + + + +++ Sbjct: 6 TDAIVLHVADYMESSRILRLVTRESGVVSVLARGARSSRKRFGAAVDLFAEGQAQLQTKP 65 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 ++L + A L S + +I + L EP +Y++L L+ Sbjct: 66 GRDLHTLVSFDVTRARAGLALSLVRFSAGSAIAEVALRLIHDEPAPMVYELLADGLDRLA 125 Query: 123 IPSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTGVTQDL---LWVSPKSGGAVCRSVGL 177 + ML+ +GF L C D ++GG +C G Sbjct: 126 TADDAHATSTALGVLWMLISEVGFRPSLDACAECHTPLDPAASARFHHRAGGTLCDRCGR 185 Query: 178 PYAEKMLVLPSF-------LWKEEQTIDADSLKSAFQLTDYFLNKYA 217 L+ P L + TI + ++ +L FL+++ Sbjct: 186 LSPGGRLLPPEAIHTVRLWLENQVPTIADNDARAHQRLLREFLSQHL 232 >gi|163840337|ref|YP_001624742.1| DNA repair protein RecO [Renibacterium salmoninarum ATCC 33209] gi|162953813|gb|ABY23328.1| DNA repair protein [Renibacterium salmoninarum ATCC 33209] Length = 251 Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 60/184 (32%), Gaps = 8/184 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++DDA++L GE + I+ ++TR++G+ + + S + L+ + + S Sbjct: 12 YRDDAVVLRTHKLGEADRIITLLTREHGQIRAVAKGIRRTSSKFGARLEPFMVADLQLIS 71 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCL-ELYDMLNIFLN 119 + ++ + R Y +L + Sbjct: 72 GRSLDIVSQAVSKSAYGEQIAAHYDRYTVATAMAETAERLTDADSESAGAQYRLLIGAFS 131 Query: 120 CHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 ++ ++ LL+ + G+ T C G S GGAVC Sbjct: 132 SLARGEHAPEL--ILDSYLLRALATAGWAPSFTDCARCGNPGPHTAFSAALGGAVCHDCR 189 Query: 177 LPYA 180 P + Sbjct: 190 PPGS 193 >gi|187477632|ref|YP_785656.1| DNA repair protein [Bordetella avium 197N] gi|115422218|emb|CAJ48742.1| DNA repair protein [Bordetella avium 197N] Length = 195 Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 51/144 (35%), Gaps = 6/144 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 A +L ++ E ++I++ +R++G + + +P+L A + ++W Sbjct: 12 RAYMLHATAWRETSLIVQSFSREHGCIALVAKGAKRPYSVLRPVLSAFQPLLMSWSGGGE 71 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L + + L R LP + L+D L Sbjct: 72 VKTLIRAEVAGVHP----LGGAALMSAWYMNELLLRLLPREDAHPLLFDAYETALQQLAG 127 Query: 124 PSVIGKIFVQIELMLLKNIGFGLD 147 + + E +LL+ G+G+D Sbjct: 128 GTRAAGALRRFEWVLLRETGYGVD 151 >gi|163754380|ref|ZP_02161502.1| DNA repair protein [Kordia algicida OT-1] gi|161325321|gb|EDP96648.1| DNA repair protein [Kordia algicida OT-1] Length = 239 Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 29/233 (12%), Positives = 61/233 (26%), Gaps = 8/233 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ----PILQAGNLVRV 56 M AI++ YG+ +I++ T G +R + Q + + Sbjct: 1 MIVTTKAIVISTIKYGDTGVIVKCFTASDGIKSYLLRGILKSKKGKLKIAYFQPLMQLEI 60 Query: 57 NWRSRLAQN-LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + + + + + + + L L + E E L++ + Sbjct: 61 VASHKNKGSLEYIKDVKTVYPYTSIHTQIAKSAIVLFLSEILNYSIQEEEKNDALFEFIE 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L I I + L K GF + +S C + Sbjct: 121 NALQWLDIHDEIANFHLVFLTNLTKYFGFYPETEDIHKDYFDLQEGQFFDQSTMNQCITG 180 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL 228 K L+ F + + + + F+ + L Sbjct: 181 ENLTYFKRLLGIKFDEQNTIMLSSYRRNEILAI---FIQYFKLHLQGFRQPKS 230 >gi|323704185|ref|ZP_08115764.1| DNA repair protein RecO [Thermoanaerobacterium xylanolyticum LX-11] gi|323536251|gb|EGB26023.1| DNA repair protein RecO [Thermoanaerobacterium xylanolyticum LX-11] Length = 248 Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 29/251 (11%), Positives = 84/251 (33%), Gaps = 20/251 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SR 61 + ++I+L R GE + ++ + T+ G+ + ++ + + + + + Sbjct: 4 IKTESIVLKSRLIGESDKVVTLFTKSNGKIDAIAKGARNSKSRYLGSSHPFSIGYYVLFE 63 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 ++E++ S Y +++ L E E +Y++L + Sbjct: 64 GQNYYYIDQWELIHSFLKIDDDILKLSYASYFADIVYKLLEENEKNTNIYNLLKYSMFLL 123 Query: 122 KIPSVIGKIFVQIEL-MLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + + + +G+ ++ C+ G ++++ SP GG +CR Sbjct: 124 EKDLFDCDLLSITFCLKFVTFMGYMPEVHHCLSCGRDDNIMYFSPLKGGVLCRDCKSSAD 183 Query: 181 EKMLVLPSFLWKEEQTIDA-----------DSLKSAF-QLTDYFLNKYALQHNIIHCHLL 228 + + L + + ++ +++ + ++ Sbjct: 184 DIFYIKRETLNMLRYLLSNGFGNIAKLRIQKDILVELDKIVTDYMSVHFDKNFESKY--- 240 Query: 229 RENFLGKLLEL 239 FL KL + Sbjct: 241 ---FLDKLKNM 248 >gi|225872266|ref|YP_002753721.1| DNA repair protein RecO [Acidobacterium capsulatum ATCC 51196] gi|225794025|gb|ACO34115.1| DNA repair protein RecO [Acidobacterium capsulatum ATCC 51196] Length = 251 Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 2/152 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLA 63 ++I+L E ++++ + TR+ G+ G ++G R + L+ V ++ + Sbjct: 7 ESIVLKSWPLHEADLVVSLFTREAGKIKGIAKSGAKSRRRFGGALEPMTHVLASYVEKPR 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 Q L + + L + E+ L + + H Sbjct: 67 QELVRLDACEIVTSPLSDPMDYARAAALAFYTEVLEEALPDHDPQEVIFRLVLSVLAHTR 126 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 I L + + +G+ DLT C V Sbjct: 127 QGAIWMPVTYFALWMPRLLGWLPDLTHCAVCD 158 >gi|169830679|ref|YP_001716661.1| DNA repair protein RecO [Candidatus Desulforudis audaxviator MP104C] gi|238688218|sp|B1I1S7|RECO_DESAP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|169637523|gb|ACA59029.1| DNA repair protein RecO [Candidatus Desulforudis audaxviator MP104C] Length = 249 Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 49/156 (31%), Gaps = 4/156 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWR 59 +Q +AI+L + E + L ++TR G+ + R + +Q R Sbjct: 3 QYQTEAIVLRASAVREADRTLVLLTRDRGKLRVWAHGAARPTSRKRGAVQPFCRSRFLLE 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + + E LE A F E + +Y +L L Sbjct: 63 -RGREIDVVRQAEALEEFPALHADLEALALAGYVCELAEGFAAEGQAEPGIYGLLLQVLR 121 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + E +L GFG +L C G Sbjct: 122 RLAEDKSGLPVR-FFEARILALTGFGPELGSCAGCG 156 >gi|119503990|ref|ZP_01626071.1| DNA repair protein RecO [marine gamma proteobacterium HTCC2080] gi|119459993|gb|EAW41087.1| DNA repair protein RecO [marine gamma proteobacterium HTCC2080] Length = 259 Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 64/208 (30%), Gaps = 11/208 (5%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM----QPILQAGNLVRVNWRS 60 + A +L R+YG+ +++++ GR V+ G+ +LQ + V Sbjct: 6 EPAWLLHRRNYGDSGFLVDILGLNSGRISAVVKGGRRKARGGSYAGVLQPFTPLLVATSG 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R + + + L+ G L R LP+ C L+ + ++ Sbjct: 66 RGELKT---LSRLELAGASIDLAGERVFSGFYLNELLVRLLPKFVSCPTLFALYGGTIDA 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV---GL 177 + + + ELMLL+ +G+GL + Sbjct: 123 L-VVTEAELDLRKFELMLLEELGYGLRFDTDANNDPIEAASAYLYDPTAGFLPRAFGLEG 181 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSA 205 + ++ + L + Sbjct: 182 AWKKEGRLQGDQLLNMADWLFNGDGLDG 209 >gi|125973581|ref|YP_001037491.1| DNA replication and repair protein RecO [Clostridium thermocellum ATCC 27405] gi|256003399|ref|ZP_05428390.1| DNA repair protein RecO [Clostridium thermocellum DSM 2360] gi|281417785|ref|ZP_06248805.1| DNA repair protein RecO [Clostridium thermocellum JW20] gi|166221889|sp|A3DEB9|RECO_CLOTH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|125713806|gb|ABN52298.1| DNA replication and repair protein RecO [Clostridium thermocellum ATCC 27405] gi|255992689|gb|EEU02780.1| DNA repair protein RecO [Clostridium thermocellum DSM 2360] gi|281409187|gb|EFB39445.1| DNA repair protein RecO [Clostridium thermocellum JW20] gi|316940178|gb|ADU74212.1| DNA repair protein RecO [Clostridium thermocellum DSM 1313] Length = 251 Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 23/169 (13%), Positives = 54/169 (31%), Gaps = 3/169 (1%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M + + I++ + GE + I+ + ++ G+ + + + + L + Sbjct: 1 MNYLKTSGIVIKEVNTGEADRIITIFSKNKGKISALAKGARRPKSHLVAGTQLLCYSEFV 60 Query: 60 -SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + +V+ES Y + + + E +P L + L Sbjct: 61 LFKGKDMYTVNSCDVIESFYDIRNDLERLTYAAHMMDIVNDVILENQPASRLLQLFLNSL 120 Query: 119 NCHKIPSVIG-KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 +I E+ LL +G+ ++ C+ G T Sbjct: 121 YMLSKTDRSPLQIVRVFEIRLLSTMGYAPWVSSCIKCGSTVFDSMYFSF 169 >gi|302389488|ref|YP_003825309.1| DNA repair protein RecO [Thermosediminibacter oceani DSM 16646] gi|302200116|gb|ADL07686.1| DNA repair protein RecO [Thermosediminibacter oceani DSM 16646] Length = 251 Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 65/191 (34%), Gaps = 2/191 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 + +A+++G R GE + IL + + + G+ R + R + + Sbjct: 4 YTTEAVVVGYRDLGEADRILTLFSPERGKIHAVARGVRRPRSPLMAGTQLFSYSKFLLVE 63 Query: 63 AQNLGEFRFEVLE-SHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 +NL L+ S YG L E E EL+ L Sbjct: 64 GRNLDSISQCELKESFFRIREDLDRMAYGSYFAELLRISTRESEKSEELFRFFMKVLYLL 123 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVSPKSGGAVCRSVGLPYA 180 ++ + + EL L+ G+ L+ CV + + S GG +C Sbjct: 124 QVWEDLEFMARIFELKLMALQGYTPQLSHCVNCRNDELKEIRFSHALGGILCEKCRGSDE 183 Query: 181 EKMLVLPSFLW 191 + +++ + L Sbjct: 184 KSVVISRAVLM 194 >gi|153815602|ref|ZP_01968270.1| hypothetical protein RUMTOR_01838 [Ruminococcus torques ATCC 27756] gi|317502139|ref|ZP_07960317.1| DNA repair protein RecO [Lachnospiraceae bacterium 8_1_57FAA] gi|331090349|ref|ZP_08339232.1| DNA repair protein RecO [Lachnospiraceae bacterium 3_1_46FAA] gi|145847033|gb|EDK23951.1| hypothetical protein RUMTOR_01838 [Ruminococcus torques ATCC 27756] gi|316896456|gb|EFV18549.1| DNA repair protein RecO [Lachnospiraceae bacterium 8_1_57FAA] gi|330401304|gb|EGG80892.1| DNA repair protein RecO [Lachnospiraceae bacterium 3_1_46FAA] Length = 255 Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 62/211 (29%), Gaps = 3/211 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 I+L GE + + ++T++ G+ F R + + + + Sbjct: 16 TGIVLSTMPVGEYDRRVVILTKEQGKISAFARGARRPNSPLVGALNPFSFGTFTMYEGRT 75 Query: 66 LGEFRFEVLESHCAKLLSSSL-FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH-KI 123 + + ++ A+L + YG + + E E+ +L L Sbjct: 76 SYTIQSASISNYFAELRGDIIGAYYGFYFLEFTDYYTKEFNDEREMLKLLYQTLRALTNP 135 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY-AEK 182 I EL L G + +C+ G + S GG VC Sbjct: 136 HIPNMLIRYIFELKALTINGQAPQVFQCMTCGNKERHAVFSAVKGGLVCSECMKDVRDGM 195 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFL 213 L + + F +T+ L Sbjct: 196 SLDPSTLYSMQYIETSTIEKLYTFNVTEKVL 226 >gi|308379182|ref|ZP_07485400.2| hypothetical protein TMJG_00632 [Mycobacterium tuberculosis SUMu010] gi|308357820|gb|EFP46671.1| hypothetical protein TMJG_00632 [Mycobacterium tuberculosis SUMu010] Length = 307 Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 25/181 (13%), Positives = 58/181 (32%), Gaps = 7/181 (3%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN 57 M ++D A++L GE + I+ ++TR +G + + + L+ + V Sbjct: 43 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 102 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + +++ +++ +I+ L E Sbjct: 103 LHP-GRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTV 161 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + + ++ LL+ + G+ LT+C +GG+VC Sbjct: 162 GALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAH 221 Query: 175 V 175 Sbjct: 222 C 222 >gi|308375863|ref|ZP_07445349.2| hypothetical protein TMGG_00923 [Mycobacterium tuberculosis SUMu007] gi|308344944|gb|EFP33795.1| hypothetical protein TMGG_00923 [Mycobacterium tuberculosis SUMu007] Length = 273 Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 25/181 (13%), Positives = 58/181 (32%), Gaps = 7/181 (3%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN 57 M ++D A++L GE + I+ ++TR +G + + + L+ + V Sbjct: 9 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 68 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + +++ +++ +I+ L E Sbjct: 69 LHP-GRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTV 127 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + + ++ LL+ + G+ LT+C +GG+VC Sbjct: 128 GALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAH 187 Query: 175 V 175 Sbjct: 188 C 188 >gi|15609499|ref|NP_216878.1| DNA repair protein RecO [Mycobacterium tuberculosis H37Rv] gi|15841874|ref|NP_336911.1| DNA repair protein RecO [Mycobacterium tuberculosis CDC1551] gi|31793539|ref|NP_856032.1| DNA repair protein RecO [Mycobacterium bovis AF2122/97] gi|121638241|ref|YP_978465.1| DNA repair protein RecO [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662194|ref|YP_001283717.1| DNA repair protein RecO [Mycobacterium tuberculosis H37Ra] gi|148823565|ref|YP_001288319.1| DNA repair protein RecO [Mycobacterium tuberculosis F11] gi|167968759|ref|ZP_02551036.1| DNA repair protein RecO [Mycobacterium tuberculosis H37Ra] gi|215404288|ref|ZP_03416469.1| DNA repair protein RecO [Mycobacterium tuberculosis 02_1987] gi|215412108|ref|ZP_03420872.1| DNA repair protein RecO [Mycobacterium tuberculosis 94_M4241A] gi|215431302|ref|ZP_03429221.1| DNA repair protein RecO [Mycobacterium tuberculosis EAS054] gi|215446606|ref|ZP_03433358.1| DNA repair protein RecO [Mycobacterium tuberculosis T85] gi|218754090|ref|ZP_03532886.1| DNA repair protein RecO [Mycobacterium tuberculosis GM 1503] gi|219558352|ref|ZP_03537428.1| DNA repair protein RecO [Mycobacterium tuberculosis T17] gi|224990735|ref|YP_002645422.1| DNA repair protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253798560|ref|YP_003031561.1| DNA repair protein RecO [Mycobacterium tuberculosis KZN 1435] gi|254232504|ref|ZP_04925831.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|254365139|ref|ZP_04981185.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|254551409|ref|ZP_05141856.1| DNA repair protein RecO [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260187365|ref|ZP_05764839.1| DNA repair protein RecO [Mycobacterium tuberculosis CPHL_A] gi|260201486|ref|ZP_05768977.1| DNA repair protein RecO [Mycobacterium tuberculosis T46] gi|260205663|ref|ZP_05773154.1| DNA repair protein RecO [Mycobacterium tuberculosis K85] gi|289443883|ref|ZP_06433627.1| DNA repair protein RecO [Mycobacterium tuberculosis T46] gi|289448004|ref|ZP_06437748.1| DNA repair protein RecO [Mycobacterium tuberculosis CPHL_A] gi|289553848|ref|ZP_06443058.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289570504|ref|ZP_06450731.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289575056|ref|ZP_06455283.1| DNA repair protein RecO [Mycobacterium tuberculosis K85] gi|289746140|ref|ZP_06505518.1| DNA repair protein recO [Mycobacterium tuberculosis 02_1987] gi|289754467|ref|ZP_06513845.1| DNA repair protein RecO [Mycobacterium tuberculosis EAS054] gi|289758486|ref|ZP_06517864.1| DNA repair protein recO [Mycobacterium tuberculosis T85] gi|289762528|ref|ZP_06521906.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|294994534|ref|ZP_06800225.1| DNA repair protein RecO [Mycobacterium tuberculosis 210] gi|297634964|ref|ZP_06952744.1| DNA repair protein RecO [Mycobacterium tuberculosis KZN 4207] gi|297731956|ref|ZP_06961074.1| DNA repair protein RecO [Mycobacterium tuberculosis KZN R506] gi|298525844|ref|ZP_07013253.1| DNA repair protein recO [Mycobacterium tuberculosis 94_M4241A] gi|306776627|ref|ZP_07414964.1| hypothetical protein TMAG_02921 [Mycobacterium tuberculosis SUMu001] gi|306780400|ref|ZP_07418737.1| hypothetical protein TMBG_00906 [Mycobacterium tuberculosis SUMu002] gi|306785150|ref|ZP_07423472.1| hypothetical protein TMCG_00462 [Mycobacterium tuberculosis SUMu003] gi|306789511|ref|ZP_07427833.1| hypothetical protein TMDG_00840 [Mycobacterium tuberculosis SUMu004] gi|306793836|ref|ZP_07432138.1| hypothetical protein TMEG_02729 [Mycobacterium tuberculosis SUMu005] gi|306798233|ref|ZP_07436535.1| hypothetical protein TMFG_01326 [Mycobacterium tuberculosis SUMu006] gi|306804109|ref|ZP_07440777.1| hypothetical protein TMHG_01556 [Mycobacterium tuberculosis SUMu008] gi|306968510|ref|ZP_07481171.1| hypothetical protein TMIG_01039 [Mycobacterium tuberculosis SUMu009] gi|307080444|ref|ZP_07489614.1| hypothetical protein TMKG_00625 [Mycobacterium tuberculosis SUMu011] gi|307085039|ref|ZP_07494152.1| hypothetical protein TMLG_02110 [Mycobacterium tuberculosis SUMu012] gi|313659290|ref|ZP_07816170.1| DNA repair protein RecO [Mycobacterium tuberculosis KZN V2475] gi|54039035|sp|P65984|RECO_MYCBO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|54041795|sp|P65983|RECO_MYCTU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166221897|sp|A1KL52|RECO_MYCBP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166221901|sp|A5U555|RECO_MYCTA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254764646|sp|C1AQS5|RECO_MYCBT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|2078037|emb|CAB08461.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv] gi|13882140|gb|AAK46725.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|31619132|emb|CAD97244.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] gi|121493889|emb|CAL72364.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124601563|gb|EAY60573.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|134150653|gb|EBA42698.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|148506346|gb|ABQ74155.1| DNA repair protein RecO [Mycobacterium tuberculosis H37Ra] gi|148722092|gb|ABR06717.1| conserved hypothetical protein [Mycobacterium tuberculosis F11] gi|224773848|dbj|BAH26654.1| DNA repair protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253320063|gb|ACT24666.1| DNA repair protein RecO [Mycobacterium tuberculosis KZN 1435] gi|289416802|gb|EFD14042.1| DNA repair protein RecO [Mycobacterium tuberculosis T46] gi|289420962|gb|EFD18163.1| DNA repair protein RecO [Mycobacterium tuberculosis CPHL_A] gi|289438480|gb|EFD20973.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289539487|gb|EFD44065.1| DNA repair protein RecO [Mycobacterium tuberculosis K85] gi|289544258|gb|EFD47906.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289686668|gb|EFD54156.1| DNA repair protein recO [Mycobacterium tuberculosis 02_1987] gi|289695054|gb|EFD62483.1| DNA repair protein RecO [Mycobacterium tuberculosis EAS054] gi|289710034|gb|EFD74050.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289714050|gb|EFD78062.1| DNA repair protein recO [Mycobacterium tuberculosis T85] gi|298495638|gb|EFI30932.1| DNA repair protein recO [Mycobacterium tuberculosis 94_M4241A] gi|308214946|gb|EFO74345.1| hypothetical protein TMAG_02921 [Mycobacterium tuberculosis SUMu001] gi|308326722|gb|EFP15573.1| hypothetical protein TMBG_00906 [Mycobacterium tuberculosis SUMu002] gi|308330135|gb|EFP18986.1| hypothetical protein TMCG_00462 [Mycobacterium tuberculosis SUMu003] gi|308333996|gb|EFP22847.1| hypothetical protein TMDG_00840 [Mycobacterium tuberculosis SUMu004] gi|308337777|gb|EFP26628.1| hypothetical protein TMEG_02729 [Mycobacterium tuberculosis SUMu005] gi|308341458|gb|EFP30309.1| hypothetical protein TMFG_01326 [Mycobacterium tuberculosis SUMu006] gi|308349255|gb|EFP38106.1| hypothetical protein TMHG_01556 [Mycobacterium tuberculosis SUMu008] gi|308353875|gb|EFP42726.1| hypothetical protein TMIG_01039 [Mycobacterium tuberculosis SUMu009] gi|308361766|gb|EFP50617.1| hypothetical protein TMKG_00625 [Mycobacterium tuberculosis SUMu011] gi|308365411|gb|EFP54262.1| hypothetical protein TMLG_02110 [Mycobacterium tuberculosis SUMu012] gi|323719029|gb|EGB28177.1| hypothetical protein TMMG_01654 [Mycobacterium tuberculosis CDC1551A] gi|326903978|gb|EGE50911.1| hypothetical protein TBPG_01867 [Mycobacterium tuberculosis W-148] gi|328458328|gb|AEB03751.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 4207] Length = 265 Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 25/181 (13%), Positives = 58/181 (32%), Gaps = 7/181 (3%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN 57 M ++D A++L GE + I+ ++TR +G + + + L+ + V Sbjct: 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + +++ +++ +I+ L E Sbjct: 61 LHP-GRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTV 119 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + + ++ LL+ + G+ LT+C +GG+VC Sbjct: 120 GALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAH 179 Query: 175 V 175 Sbjct: 180 C 180 >gi|41408240|ref|NP_961076.1| DNA repair protein RecO [Mycobacterium avium subsp. paratuberculosis K-10] gi|61215113|sp|Q73Y16|RECO_MYCPA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|41396595|gb|AAS04459.1| hypothetical protein MAP_2142c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 265 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 57/181 (31%), Gaps = 7/181 (3%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN 57 M ++D A++L GE + I+ ++TR +G + + + L+ + Sbjct: 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDAQ 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + +++ ++S +++ L E Sbjct: 61 LHP-GRNLDIVTQVVSIDAFATDIVSDYGRYTCACAMLETAERLAGEERAPAPALHGLTV 119 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + + ++ LL+ + G+ LT+C +GG+VC Sbjct: 120 SALRAVADGRRSRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHVGAGGSVCPH 179 Query: 175 V 175 Sbjct: 180 C 180 >gi|295398007|ref|ZP_06808063.1| recombination protein O [Aerococcus viridans ATCC 11563] gi|294973765|gb|EFG49536.1| recombination protein O [Aerococcus viridans ATCC 11563] Length = 266 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 65/184 (35%), Gaps = 2/184 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 D I+L R Y EK++++++ T+++G+ + F++N Q A +R ++ + Sbjct: 10 DGIVLFTRKYKEKDLLIKIFTKEFGKRMFFIKNIQRQNNGLREIAFPYMRASFVGTINDK 69 Query: 66 LGEFRFEVLESHCA--KLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 F + + + Y + +++D+L L + Sbjct: 70 GFSFLNDTDDVLFPKTTISDIQANAYAAYMTGLTDAAFEDFIKEDKVFDLLWHGLGKIEA 129 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E+ LL G + C + G Q S + G +C ++ Sbjct: 130 GVDPSVVANIFEIQLLPKFGVAPNFRSCAICGRDQGRFDYSMQYAGVLCEQHFHMDDRRL 189 Query: 184 LVLP 187 P Sbjct: 190 HWSP 193 >gi|296269159|ref|YP_003651791.1| DNA repair protein RecO [Thermobispora bispora DSM 43833] gi|296091946|gb|ADG87898.1| DNA repair protein RecO [Thermobispora bispora DSM 43833] Length = 260 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 58/157 (36%), Gaps = 4/157 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++D+ ++L + GE + I+ ++T++ G+ G + + R L+ V + + Sbjct: 4 YRDEGVVLRTQKLGEADRIITILTKRTGKVRGVAKGIRRTTSRFGARLEPFTHVDLQLHA 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCL-ELYDMLNIFLN 119 + ++ + A + + + G+ + R + L+ +L L Sbjct: 64 GRSLDVITQAETLHPYGQAIVRDYARYTAGMAMLETADRLAAAEKEPALRLFLLLVGGLR 123 Query: 120 CHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTG 155 + ++ L L G+ LT C G Sbjct: 124 TLAEGAHEPRLVLDAFLLRSLAVAGYAPALTACARCG 160 >gi|219847691|ref|YP_002462124.1| DNA repair protein RecO [Chloroflexus aggregans DSM 9485] gi|219541950|gb|ACL23688.1| DNA repair protein RecO [Chloroflexus aggregans DSM 9485] Length = 251 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 51/156 (32%), Gaps = 2/156 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SR 61 ++ +A+IL E + +L + T + G+ + + + + V+ + Sbjct: 6 YRSEAVILRRNDVAEADRLLLIATPK-GKRWVIAKGARKTKSRLAGHIELFTHVHMMLAV 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + +++ + S G + RF E + L+ +L Sbjct: 65 GRNLDIVTQSQIVHAFPTLRSELSRLGCGYYAAELYDRFTVEEDDNPPLFQLLVETFMSL 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 EL LL +G+ L +CVV Sbjct: 125 DRSPQPDLTLRSFELHLLHLLGYRPQLHRCVVCDDI 160 >gi|111221453|ref|YP_712247.1| DNA repair protein RecO [Frankia alni ACN14a] gi|111148985|emb|CAJ60665.1| DNA repair protein recO (Recombination protein O) [Frankia alni ACN14a] Length = 241 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 67/178 (37%), Gaps = 6/178 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+ ++L E + I+ V+TR+ GR + + S R L+ G V + S Sbjct: 2 YRDEGVVLRTTPLAEADRIITVLTRRGGRVRAVAKGVRKTSSRFGSRLEPGTYVDLMLHS 61 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + + +++ + + ++ L E L L + Sbjct: 62 GRSLDT-VTQADIISPYGTTIALDYARHTAAAVMLETAERLTSEERQPALRLFLLLVGGL 120 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + + ++ LL+++ G+G+ L C G L +S GG VC Sbjct: 121 RTLAAGQRPAPLVLDAYLLRSLAVSGYGMALDDCARCGEPGQHLSLSVAGGGVVCPQC 178 >gi|315655179|ref|ZP_07908080.1| DNA repair protein RecO [Mobiluncus curtisii ATCC 51333] gi|315490434|gb|EFU80058.1| DNA repair protein RecO [Mobiluncus curtisii ATCC 51333] Length = 243 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 68/205 (33%), Gaps = 5/205 (2%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVN 57 M ++D A++L + GE + I+ ++T ++G R + R+ L+ V + Sbjct: 1 MRTFRDAAVVLRTQDLGEADRIVTLLTEKHGLLRCVGRGVRKTMSRLGARLEPFGAVDIQ 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLNI 116 R + + E+L + L + +V L E Y + Sbjct: 61 IRWGKSDLHHIEQVEILAPYGRSLANDYARYTAANLMVETLERLTEDSWTNERYYHLTIG 120 Query: 117 FLNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L+ I L L+ G+ C G + +P GGA+C + Sbjct: 121 ALHALATGRHEPSLILDSYLLRLMSLAGWAASCWDCASCGAGGPHEYFNPSGGGAMCVNC 180 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDAD 200 L A + L T D Sbjct: 181 KLTGARAVDSETMRLLAALATGDWQ 205 >gi|91215439|ref|ZP_01252410.1| DNA repair protein [Psychroflexus torquis ATCC 700755] gi|91186391|gb|EAS72763.1| DNA repair protein [Psychroflexus torquis ATCC 700755] Length = 239 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 47/161 (29%), Gaps = 5/161 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ----PILQAGNLVRV 56 M + AI++ +GE ++I++ T + G ++ + + + Q L+ + Sbjct: 1 MQLKTKAIVISNVKFGEADLIVKCFTLEKGVVSFMLKGIRKSKKGRMRVSLFQPLTLLEI 60 Query: 57 NWRSR-LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + +V + L + E E L+ L Sbjct: 61 EATYKENKNLQYLKEVKVDYPLQTLHTDIFKSTVVMFLAEVLKSSIQEEEKNESLFQFLK 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 L I + + L +GF D + Sbjct: 121 ESLIYLDQVDSIKNFHLHFIVKLTSFLGFSPDQSSEAFPYF 161 >gi|222526397|ref|YP_002570868.1| DNA repair protein RecO [Chloroflexus sp. Y-400-fl] gi|222450276|gb|ACM54542.1| DNA repair protein RecO [Chloroflexus sp. Y-400-fl] Length = 251 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 50/154 (32%), Gaps = 2/154 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++ +A+IL + E + +L + T G+ + + + + + Sbjct: 6 YRSEAVILRRTDFAEADRLLLIATPT-GKRWVIAKGARKMKSRLAGHIELFTHAQMMFAV 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER-EPCLELYDMLNIFLNCH 121 +NL + L + L + L+ L E L+ +L L Sbjct: 65 GRNLDIVTQSQIVHAFPVLRTDLTRLGCGYYVAELYDRLAAESEENPLLFQLLVETLQAL 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + EL LL +G+ L CVV Sbjct: 125 DGSANPELTLRSFELHLLHILGYRPQLHYCVVCN 158 >gi|163848468|ref|YP_001636512.1| DNA repair protein RecO [Chloroflexus aurantiacus J-10-fl] gi|163669757|gb|ABY36123.1| DNA repair protein RecO [Chloroflexus aurantiacus J-10-fl] Length = 256 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 50/154 (32%), Gaps = 2/154 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++ +A+IL + E + +L + T G+ + + + + + Sbjct: 11 YRSEAVILRRTDFAEADRLLLIATPT-GKRWVIAKGARKMKSRLAGHIELFTHAQMMFAV 69 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER-EPCLELYDMLNIFLNCH 121 +NL + L + L + L+ L E L+ +L L Sbjct: 70 GRNLDIVTQSQIVHAFPVLRTDLTRLGCGYYVAELYDRLAAESEENPLLFQLLVETLQAL 129 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + EL LL +G+ L CVV Sbjct: 130 DGSANPELTLRSFELHLLHILGYRPQLHYCVVCN 163 >gi|305666028|ref|YP_003862315.1| DNA repair protein [Maribacter sp. HTCC2170] gi|88710803|gb|EAR03035.1| DNA repair protein [Maribacter sp. HTCC2170] Length = 239 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 62/218 (28%), Gaps = 12/218 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ----PILQAGNLVRV 56 M AI+L YG+ ++I++ T G ++ + R Q + + Sbjct: 1 MQVTTKAIVLSSLKYGDTSLIVKAFTLSDGLKSYLLKGVLASRKGKLKTAYFQPLTQLEI 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYG-LQSIVPLFRFLPEREPCLELYDMLN 115 + L R + L S L L + E E L+ + Sbjct: 61 VANHKNKGTLESIREARVTHQYQTLHSDISKNAITLFLSEMLANSIQEEERNEGLFYYME 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L + + + L K +GF D T G+ DLL + + ++ Sbjct: 121 SALQWLDANTEANNFHIYFLIDLTKYLGFYPDTTS--TEGLYFDLLEAEFTNNLTLSPNI 178 Query: 176 GLPYAEKMLVLPSFLWKEEQTI-----DADSLKSAFQL 208 + I + L + L Sbjct: 179 KGENLNYFKRFLGINFDTLNKIKMKKANRQELLQSLVL 216 >gi|154505899|ref|ZP_02042637.1| hypothetical protein RUMGNA_03441 [Ruminococcus gnavus ATCC 29149] gi|153793917|gb|EDN76337.1| hypothetical protein RUMGNA_03441 [Ruminococcus gnavus ATCC 29149] Length = 276 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 65/213 (30%), Gaps = 3/213 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++L GE + + ++T++ G+ F R + + + ++ Sbjct: 37 TGMVLSTAPVGEYDRRVVILTKEQGKISAFARGARRPNSPLVGAVNPFSFGEFTMYEGRS 96 Query: 66 LGEFRFEVLESHCAKLLSSSL-FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH-KI 123 + + ++ ++L + YG + + E+ E+ +L + Sbjct: 97 SHTIQSVKITNYFSELREDMIGAYYGFYFLEFANYYTKEQNDEREMLKLLYQTMKALTSP 156 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY-AEK 182 I EL G G + +CV + S + GG VC Sbjct: 157 HIPNLLIRRIFELKAFCINGEGPQVFQCVRCQKKDGQMVFSAREGGLVCTDCARNISDGI 216 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNK 215 L + + I F ++ L K Sbjct: 217 SLDNSTLYTMQYIEISTIEKLYTFTVSREVLEK 249 >gi|147677232|ref|YP_001211447.1| recombinational DNA repair protein [Pelotomaculum thermopropionicum SI] gi|189039660|sp|A5D3W7|RECO_PELTS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|146273329|dbj|BAF59078.1| recombinational DNA repair protein [Pelotomaculum thermopropionicum SI] Length = 256 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 48/154 (31%), Gaps = 4/154 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++ DAI+L R GE + IL + +R++GR R + +Q R R Sbjct: 4 YKADAIVLRARDCGEGDKILTLYSREHGRIKAMAHGVSKPTSRKRGAVQPFTRSRFLLRR 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + V L S + + L L E L + + Sbjct: 64 GRELDTVSQCEGVET--FPFLRESLERIGYASYVAELVEALTPEGEPNESLFFLLLDVLR 121 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT 154 + EL + +G+ L +C Sbjct: 122 LLAGGDAEMLARAFELKVAALLGYCPVLERCSHC 155 >gi|240172989|ref|ZP_04751647.1| DNA repair protein RecO [Mycobacterium kansasii ATCC 12478] Length = 265 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 23/181 (12%), Positives = 57/181 (31%), Gaps = 7/181 (3%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN 57 M ++D A++L GE + I+ ++TR +G + + + L+ + Sbjct: 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDAQ 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + +++ +++ +++ L E Sbjct: 61 LHP-GRNLDIVTQVVSVDAFATDIVNDYGRYTCGCAMLETAERLAGEERAPAPALHRLTV 119 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + + ++ LL+ + G+ LT+C +GG+VC Sbjct: 120 GALRAVADGRRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIAAGGSVCAH 179 Query: 175 V 175 Sbjct: 180 C 180 >gi|145223300|ref|YP_001133978.1| DNA repair protein RecO [Mycobacterium gilvum PYR-GCK] gi|315443760|ref|YP_004076639.1| DNA replication and repair protein RecO [Mycobacterium sp. Spyr1] gi|189039659|sp|A4T2B7|RECO_MYCGI RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|145215786|gb|ABP45190.1| DNA replication and repair protein RecO [Mycobacterium gilvum PYR-GCK] gi|315262063|gb|ADT98804.1| DNA replication and repair protein RecO [Mycobacterium sp. Spyr1] Length = 273 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 23/181 (12%), Positives = 60/181 (33%), Gaps = 7/181 (3%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN 57 M ++D A++L GE + I+ ++TR++G + + + L+ + V Sbjct: 1 MRLYRDRAVVLRQHKLGEADRIVSLLTREHGLVRAVAKGVRRTRSKFGARLEPFAHIDVQ 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + +++ + ++S +++ + E Sbjct: 61 LHP-GRNLDIVTQVQAIDAFASDIVSDYGRYTCACAMLETAERIAGEERAPVPALHRLTV 119 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + + ++ LL+ + G+ L +C +GG+VC Sbjct: 120 AALRAVADGTRPRELVLDAYLLRAMGVAGWAPALIECARCAAPGPHRAFHVAAGGSVCVH 179 Query: 175 V 175 Sbjct: 180 C 180 >gi|67925437|ref|ZP_00518781.1| Recombination protein O, RecO [Crocosphaera watsonii WH 8501] gi|67852716|gb|EAM48131.1| Recombination protein O, RecO [Crocosphaera watsonii WH 8501] Length = 278 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 33/241 (13%), Positives = 72/241 (29%), Gaps = 12/241 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN-WRSR 61 +Q IIL + E + ++ +++ YG V + + + ++ V ++ Sbjct: 5 YQTTGIILKGIPFQEADRLVTLLSPDYGLIRAIVPGARKQKSRLRGRSELFVINELLIAK 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + LES+ + + P +E+Y++ N L Sbjct: 65 GRSLDKITQANTLESYPGLSKDLGKLAAAQYLAELVLNLALDDLPQVEVYELFNEHLRRL 124 Query: 122 KIPSVIGKIFVQIE---LMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + S+ ++ + LL G G + +C VT + + P G Sbjct: 125 EKMSLAESLYGYLAQAVFHLLAIAGIGPQVHRCCVTQEELNPNFHDPSWCVGFSFDAGGL 184 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNI-IHCHLLRENFLGKLL 237 ++ I + + T LQH + +L Sbjct: 185 INLRIRDKEK---NNTNPIVLPIINQRLKAT----ELTILQHLNESSLPHPYKILPATIL 237 Query: 238 E 238 + Sbjct: 238 D 238 >gi|299139030|ref|ZP_07032207.1| DNA repair protein RecO [Acidobacterium sp. MP5ACTX8] gi|298599184|gb|EFI55345.1| DNA repair protein RecO [Acidobacterium sp. MP5ACTX8] Length = 249 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 54/153 (35%), Gaps = 4/153 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLA 63 +AI+L + E ++++ TR G+ G R+ R + L+ VR ++ R Sbjct: 12 EAIVLRTWPFHEADLLISFFTRDQGKVKGVARHAMKSRRRFGGALEPATHVRAHYTERPR 71 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML-NIFLNCHK 122 Q L + L GLQ +V + + L L + Sbjct: 72 QELVRLDNFEILWSPLTAPVDYLRTAGLQLVVEVLEEAMPDLAPEDNIFRLALATLTAMQ 131 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 SV + M + +G+ +L C V G Sbjct: 132 ADSVWLPVTYFCLWMN-RLMGWMPELGHCAVCG 163 >gi|169628765|ref|YP_001702414.1| DNA repair protein RecO [Mycobacterium abscessus ATCC 19977] gi|238688930|sp|B1MN48|RECO_MYCA9 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|169240732|emb|CAM61760.1| DNA repair protein RecO [Mycobacterium abscessus] Length = 261 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 26/181 (14%), Positives = 61/181 (33%), Gaps = 7/181 (3%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN 57 M ++D A++L GE + I+ ++TRQ+G + + + L+ + V Sbjct: 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRQHGLVRAVAKGVRRTRSKFGSRLEPFAHIDVQ 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + +++ A ++S +I+ + E + Sbjct: 61 LHP-GRNLDIVTQVQAIDAFAADIVSDYGRYTTACAILETAERIAGEERAPAVALHRLTV 119 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 I + ++ LL+ + G+ + +C +GG+VC Sbjct: 120 GALRAIADQQRSRELILDAYLLRAMSIAGWAPAIGECARCATPGPHRAFHVAAGGSVCVH 179 Query: 175 V 175 Sbjct: 180 C 180 >gi|331091566|ref|ZP_08340403.1| DNA repair protein RecO [Lachnospiraceae bacterium 2_1_46FAA] gi|330403731|gb|EGG83285.1| DNA repair protein RecO [Lachnospiraceae bacterium 2_1_46FAA] Length = 260 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 67/213 (31%), Gaps = 3/213 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 I+L V GE + + ++T++ GR F + + Q + +N Sbjct: 20 TGIVLSVTPIGEYDKRVVILTKEKGRISAFAKGARRPNSQFGGAVSPFCFGEFTLYEGRN 79 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCL-ELYDMLNIFLNCH-KI 123 + ++ +L + Y + + + ++ +L K Sbjct: 80 SYNIMQVHISNYFQELKNDMEATYYGFYFMEFAEYYTREQNDETQMLKLLYQTFRALTKK 139 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY-AEK 182 I EL + G G + +CV G + S + GG +C++ Sbjct: 140 NISNELIRCIYELKAVYINGEGPQVFQCVKCGSADAPVVFSVRQGGIICKNCINEVKDAV 199 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNK 215 + + + + F +++ L K Sbjct: 200 EIDTSTLYAMQYIAGSSIEKLYTFTVSENVLKK 232 >gi|296166314|ref|ZP_06848751.1| recombination protein O [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898323|gb|EFG77892.1| recombination protein O [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 267 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 57/181 (31%), Gaps = 7/181 (3%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN 57 M ++D A++L GE + I+ ++TR +G + + + L+ + Sbjct: 3 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDAQ 62 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + +++ ++S +++ L E Sbjct: 63 LHP-GRNLDIVTQVVSIDAFATDIVSDYGRYTCGCAMLETAERLAGEERAPAPALHRLTV 121 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + + ++ LL+ + G+ LT+C +GG+VC Sbjct: 122 SALRAVADGRRSRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHVGAGGSVCTH 181 Query: 175 V 175 Sbjct: 182 C 182 >gi|225021780|ref|ZP_03710972.1| hypothetical protein CORMATOL_01808 [Corynebacterium matruchotii ATCC 33806] gi|224945476|gb|EEG26685.1| hypothetical protein CORMATOL_01808 [Corynebacterium matruchotii ATCC 33806] Length = 263 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 57/179 (31%), Gaps = 3/179 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 +++ A+++ GE + I+ +T+ G G + + R + LQ + V + Sbjct: 6 YRECALVIRTYDLGEADRIIVFLTQHRGLVRGVAKGVRRTRSRFGSRLQPFVELDVQFYV 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLN 119 V + + + + + R L E LY ++ L Sbjct: 66 GRELESVTAADTVGFYGSGIIDNITCYTAASAVLEAAERLSLAHDEHDDRLYPLVVDTLK 125 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + L + G+ L C P++GGAVC + P Sbjct: 126 QLQHAPEPKLRLDTFLLQAMTVAGWAPSLYYCAQCQAPGPHHAFHPRTGGAVCGTCRPP 184 >gi|315606672|ref|ZP_07881683.1| recombination protein O [Prevotella buccae ATCC 33574] gi|315251682|gb|EFU31660.1| recombination protein O [Prevotella buccae ATCC 33574] Length = 241 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 50/156 (32%), Gaps = 5/156 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + AI+L GE I++++T + GR R S + + Q L+ + Sbjct: 1 MLVKTKAIVLHSIKLGESKTIVDMLTERQGRVSFVCRIASSGKAKIKKQFFQPLTLLELE 60 Query: 58 WRSRLAQN-LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + SR + +L + L L+ E + L+ + Sbjct: 61 YDSRPGRTLRHIGDIRILTPFRTLPFDAFKLSIALFLAEFLYYSTREEQENEPLFAYVEN 120 Query: 117 FLNCHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKC 151 + + + L + IGF +L Sbjct: 121 SILWLDGAERAYANFHLVFMMRLSRFIGFFPNLDDY 156 >gi|229820258|ref|YP_002881784.1| DNA repair protein RecO [Beutenbergia cavernae DSM 12333] gi|259563675|sp|C5C4P4|RECO_BEUC1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|229566171|gb|ACQ80022.1| DNA repair protein RecO [Beutenbergia cavernae DSM 12333] Length = 243 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 67/179 (37%), Gaps = 8/179 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+A++L GE + IL ++TR +G+ + + S + L+ ++ + + Sbjct: 4 YRDEAVVLRTHKLGEADRILTLLTRHHGQVRAVAKGVRRTSSKFGARLEPFGVIDLQLYA 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC-LELYDMLNIFLN 119 + ++ + + + +L+ + R + Y +L L Sbjct: 64 GRSLDVVTQVDTLAPHGRSIVGDYALYTTATAMVETAERLTEIEREPATQQYLLLVGALR 123 Query: 120 CHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + ++ LL+++ G+ T C S GGA+C++ Sbjct: 124 ALAERAHAPTLV--LDSYLLRSLAVAGWAPTFTDCARCSREGPHRAFSAPMGGALCQAC 180 >gi|116670772|ref|YP_831705.1| DNA repair protein RecO [Arthrobacter sp. FB24] gi|116610881|gb|ABK03605.1| DNA replication and repair protein RecO [Arthrobacter sp. FB24] Length = 256 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 67/212 (31%), Gaps = 8/212 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++DDA++L GE + I+ ++T+ +G+ + + S R L+ + + S Sbjct: 17 YRDDAVVLRTHKLGEADRIITLLTKHHGQVRAVAKGVRRTSSRFGARLEPFMVADLQLIS 76 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC-LELYDMLNIFLN 119 ++ + + Y++L L Sbjct: 77 GRTLDVVTQAVAKGAYGGNIAADYGRYTVAAAMTETAEKLTDVDGEAGTAQYNLLVGALA 136 Query: 120 CHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 ++ ++ LL+ + G+ T C G S GG VC + Sbjct: 137 SLSRGEHTPEL--ILDSYLLRALATGGWAPSFTVCARCGAPGPHTAFSAPLGGMVCSNCR 194 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQL 208 P + FL T D + ++ L Sbjct: 195 PPGSPAPAAETVFLLGALLTGDWTTADTSLAL 226 >gi|302528829|ref|ZP_07281171.1| DNA repair protein RecO [Streptomyces sp. AA4] gi|302437724|gb|EFL09540.1| DNA repair protein RecO [Streptomyces sp. AA4] Length = 258 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 68/180 (37%), Gaps = 6/180 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D ++L GE + I+ ++T+++G+ + + S R L+ V V + Sbjct: 5 YRDTGVVLRTHKLGEADRIVTLLTKRHGKVRAVAKGVRRTSSRFGARLEPFGHVDVQFYP 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCL--ELYDMLNIFL 118 + ++ + E +++ L++ +I L E +LY ++ L Sbjct: 65 GRSLDV-ITQVETVDAFALPLVADYQRYTAASAIAETADRLSAEEGEPVLKLYLLVVGAL 123 Query: 119 NCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + L + G+ +T+C G+ + +GG++C + Sbjct: 124 RALAGGQRDASLVLDAFFLRAMAYAGWAPAITECARCGLPGPHAAFNVAAGGSMCPDCRI 183 >gi|163856076|ref|YP_001630374.1| DNA repair protein RecO [Bordetella petrii DSM 12804] gi|163259804|emb|CAP42105.1| DNA repair protein RecO [Bordetella petrii] Length = 195 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 54/143 (37%), Gaps = 6/143 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQ 64 A +L ++ E ++I++ +R++G + + +P+L A + ++W Sbjct: 13 AYMLHATAWRETSLIVQSFSREHGCVALVAKGAKRPYSVLRPVLSAFQPLLLSWSGAGEV 72 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 E + L+ + + L R LP + L+D + L Sbjct: 73 KT----LTRAEVAGLRPLAGTALMSAWYMNELLLRLLPREDAHPALFDAYDTALQQLAGG 128 Query: 125 SVIGKIFVQIELMLLKNIGFGLD 147 + + E LL+ G+G+D Sbjct: 129 TRAAGALRRFEWTLLRETGYGID 151 >gi|320354704|ref|YP_004196043.1| DNA repair protein RecO [Desulfobulbus propionicus DSM 2032] gi|320123206|gb|ADW18752.1| DNA repair protein RecO [Desulfobulbus propionicus DSM 2032] Length = 256 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 55/149 (36%), Gaps = 4/149 (2%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 +L + +GE + ++ + +R GR G + + + + + + + R + Sbjct: 9 GFVLKIAEHGESDKLVTLYSRDVGRMTGIAKGARKSKQRFVNKLELFSSLKVLYRPPRVH 68 Query: 67 GEFRFEV----LESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 G L + L + + RF E +P LY++L L+ Sbjct: 69 GGLHVLDDAELLNARLPLRLEYRRYAVAIHLSELFLRFTRENDPDAHLYELLRWTLDLLS 128 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKC 151 + KI V L LL G+ +L +C Sbjct: 129 VDKAPLKIMVFSYLHLLAASGYRPELDRC 157 >gi|87310533|ref|ZP_01092662.1| probable DNA repair protein recO [Blastopirellula marina DSM 3645] gi|87286754|gb|EAQ78659.1| probable DNA repair protein recO [Blastopirellula marina DSM 3645] Length = 250 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 61/155 (39%), Gaps = 3/155 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR 61 + I++ + + E + I + T +G+ G + + + + +L R+ + + Sbjct: 5 KTTGIVIRIVEFSESSCITTLFTEDFGKISGIAKGCRRPKSAFESAIDLLSLCRIVFLHK 64 Query: 62 LAQNLGEFRFEV-LESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + +L L + S G L F E +P EL+ + + L Sbjct: 65 TSDSLDILTEAKLLRKFRSAQRSLPHLYAGYYIAELLGEFTHESDPYAELFHIADQTLAE 124 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + K+ + EL LL+ +G +L+ CV TG Sbjct: 125 LDGGGNVPKLVLHFELSLLRLLGQLPELSFCVDTG 159 >gi|84390106|ref|ZP_00991368.1| DNA repair protein RecO [Vibrio splendidus 12B01] gi|86146357|ref|ZP_01064681.1| DNA repair protein RecO [Vibrio sp. MED222] gi|84376760|gb|EAP93635.1| DNA repair protein RecO [Vibrio splendidus 12B01] gi|85835836|gb|EAQ53970.1| DNA repair protein RecO [Vibrio sp. MED222] Length = 207 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 58/205 (28%), Gaps = 11/205 (5%) Query: 35 FVRNGQSHRM--QPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQ 92 + +S R + LQ + + W + + + L+ + Sbjct: 1 MSKGARSKRSNLKGALQPFTPLLLKWSGNGS---MKTLRQAEPISLGLPLAGINLYSAMY 57 Query: 93 SIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCV 152 + R L + L + EL LL +G+G+D C Sbjct: 58 VNELVGRVLMAEVAMPAFFHDYLHALTELAHNENPEPALRRFELALLSAMGYGVDFLHCA 117 Query: 153 VTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYF 212 TG D + + E + I + LK+A + T Sbjct: 118 GTGEAIDPSMTYRYREQKGFIASVRRDNLTFMGDELIAISERRFITKEQLKAAKRFT--- 174 Query: 213 LNKYALQHNIIHCH-LLRENFLGKL 236 + AL+ + RE F+ + Sbjct: 175 --RIALKPYLGGKPLKSRELFMPTI 197 >gi|148272759|ref|YP_001222320.1| DNA repair protein /recombination protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830689|emb|CAN01629.1| DNA repair protein /recombination protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 309 Score = 79.9 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 66/183 (36%), Gaps = 4/183 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++D+ ++L GE + I+ +++RQ+G+ + + + L+ + + Sbjct: 4 YRDEIVVLRTHKLGEADRIVTMLSRQHGKIRAVAKGVRRTQSKFGARLEPFMVADAQFFE 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 ++ + E + S+ A + + ++V + E E L+ Y +L L Sbjct: 64 GRTLDI-ITQAESIASYGALIAADYGSYTAASAMVETADRVTEDEGSLQQYLLLVGALRS 122 Query: 121 HKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + L L G+ C VTG + GG V + P Sbjct: 123 LSRHEHGASLTLDSYLLRSLSMAGWAPSFQDCAVTGAPGPHSAFVVQLGGVVADAAAPPG 182 Query: 180 AEK 182 + + Sbjct: 183 SPR 185 >gi|158521720|ref|YP_001529590.1| DNA repair protein RecO [Desulfococcus oleovorans Hxd3] gi|226737861|sp|A9A0L3|RECO_DESOH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|158510546|gb|ABW67513.1| DNA repair protein RecO [Desulfococcus oleovorans Hxd3] Length = 260 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 68/196 (34%), Gaps = 11/196 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 + AIIL +Y E + IL+++T + GR +N + + + IL+ + + Sbjct: 4 FSSPAIILRRTAYAEYDTILDLLTLERGRITAMAKNARKSKKRFAGILEPFCCLDAVFTD 63 Query: 61 RLAQNLGEF--RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 A++ + A L+ Y + R++ E + L+ +L+ L Sbjct: 64 PSARSGMTILKEAAMTAPFGAIRLNMEKVAYASYWSEMVNRWVKEDDTQSALFHLLHYVL 123 Query: 119 NCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD------LLWVSPKSGGAV 171 + + ++ + G + C V D L++ GG V Sbjct: 124 FMLDSGKASHADLSILFQVRFMTLAGLFPGMAACRVCKTEIDRLSGSPTLYLDIARGGIV 183 Query: 172 CRSVGLPYAEKMLVLP 187 C G A P Sbjct: 184 CHRCGGEGAGSQYRKP 199 >gi|325285977|ref|YP_004261767.1| DNA repair protein RecO [Cellulophaga lytica DSM 7489] gi|324321431|gb|ADY28896.1| DNA repair protein RecO [Cellulophaga lytica DSM 7489] Length = 239 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 61/222 (27%), Gaps = 5/222 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR----MQPILQAGNLVRV 56 M AI+L YG+ ++I++ T G ++ S + Q + + Sbjct: 1 MQVTTKAIVLSALKYGDNSLIVKAYTLSDGLKSYLLKGVLSSKKGKVKAAYFQPLTQLEL 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGL-QSIVPLFRFLPEREPCLELYDMLN 115 + L R H L S+ L L E EP L++ + Sbjct: 61 IAVHKNKGTLESVREAKTSYHYQTLHSNIAKNAMTQFLAEMLSNSLLEEEPNENLFNYIE 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L S I + L + K +GF D + K Sbjct: 121 AALQWLDTESQIANFHLHFLLSITKYLGFYPDSKNNSFLYFDLLEGGFTNKPSLNPVIQG 180 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYA 217 K + +F ++ + + + + Sbjct: 181 TNLNYFKTFLGINFDAIHTIKMNKTDRQELLKSLILYFELHL 222 >gi|110597274|ref|ZP_01385562.1| DNA repair protein RecO [Chlorobium ferrooxidans DSM 13031] gi|110341110|gb|EAT59578.1| DNA repair protein RecO [Chlorobium ferrooxidans DSM 13031] Length = 284 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 63/158 (39%), Gaps = 4/158 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR 59 + A+IL Y +++ I + TR++G+ ++ ++ + + + AGN+V V Sbjct: 25 IVKTRAVILREVKYRDQSKICALYTREFGKISVIIKGARNPKNKLSGLFSAGNVVDVVLY 84 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFL 118 + ++++ L L I+ L R E L L+ +L L Sbjct: 85 KKQSRDIQLVSDGNLVLSPMVPDPDMERFAVLYQIIDLIRTGTESDEKNLPLFTLLAGTL 144 Query: 119 NCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + ++ L L+ +GF L+ CV +G Sbjct: 145 QQLYRSGVNFRQLHAWFLLRLVSLMGFQPLLSNCVFSG 182 >gi|258516215|ref|YP_003192437.1| DNA repair protein RecO [Desulfotomaculum acetoxidans DSM 771] gi|257779920|gb|ACV63814.1| DNA repair protein RecO [Desulfotomaculum acetoxidans DSM 771] Length = 244 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 49/154 (31%), Gaps = 4/154 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++ +A++L R E + +L + +RQ+G+ S R + +Q Sbjct: 4 YKAEAVVLRTRELREADKLLVLYSRQHGKITVAAHGVSKPSSRKRGSVQPFCHTNFLLHK 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + V A L S+ L +V L E +L + + Sbjct: 64 GRQLDSVSQCDGVE--IFAHLRSNFELLSCASYLVELVEAFSVEGDPNEYVFLLLVSIFH 121 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT 154 P + E+ LL GF CV Sbjct: 122 LLNPLDAELLTRAFEIKLLTVFGFRPHWESCVHC 155 >gi|288925539|ref|ZP_06419472.1| DNA repair protein RecO [Prevotella buccae D17] gi|288337755|gb|EFC76108.1| DNA repair protein RecO [Prevotella buccae D17] Length = 241 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 50/156 (32%), Gaps = 5/156 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + AI+L GE I++++T + GR R S + + Q L+ + Sbjct: 1 MLVKTKAIVLHSIKLGESKTIVDMLTERQGRVSFVCRIASSGKAKIKKQFFQPLTLLELE 60 Query: 58 WRSRLAQN-LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + SR + +L + L L+ E + L+ + Sbjct: 61 YDSRSGRTLRHIGDIRILTPFRTLPFDAFKLSIALFLAEFLYYSTREEQENEPLFAYVEN 120 Query: 117 FLNCHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKC 151 + + + L + IGF +L Sbjct: 121 SILWLDGAERAYANFHLVFMMRLSRFIGFFPNLDDY 156 >gi|260591753|ref|ZP_05857211.1| DNA repair protein RecO [Prevotella veroralis F0319] gi|260536037|gb|EEX18654.1| DNA repair protein RecO [Prevotella veroralis F0319] Length = 241 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 56/156 (35%), Gaps = 5/156 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + AI+L +GE ++I+++ T Q GR R ++ + + Q L+ + Sbjct: 1 MILKSKAIVLRSMKFGEASLIIDMFTEQEGRISFITRIAKTAKGKIKKQYFQPLTLLELE 60 Query: 58 WRSRLAQNLGEFRFEVL-ESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R +L + + + + L L+ + L+LY+ + Sbjct: 61 FDYRPRTSLQHIKEVRILYPYASIPFDPIKSAILLFLSEFLYHVTRSEQQNLQLYNYVCT 120 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKC 151 L + + L + IGF +L Sbjct: 121 SLQWLDGAARSYANFHLVFMMRLSRFIGFFPNLEAY 156 >gi|108804341|ref|YP_644278.1| DNA repair protein RecO [Rubrobacter xylanophilus DSM 9941] gi|122381777|sp|Q1AVW2|RECO_RUBXD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|108765584|gb|ABG04466.1| DNA repair protein RecO [Rubrobacter xylanophilus DSM 9941] Length = 248 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 48/155 (30%), Gaps = 3/155 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SR 61 ++ I+L YGE + IL++ TR G + + R + + V++ R Sbjct: 4 YRSRGIVLRSIRYGEADRILDIYTRDAGLVSCIAKGIRRTRSRFGARLEPFSCVDFMAYR 63 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + E L S + L P +++L L+ Sbjct: 64 GRTLDTITQAESLRSFRGVRERLDRLQAAAGMA-GVLHALSGGTPDRRTFNLLYRALDAL 122 Query: 122 KIPSVIGKIFVQIELMLLKNI-GFGLDLTKCVVTG 155 + + + L + G+ L C G Sbjct: 123 EKGEEGFGMIEASFGLKLAVLSGYAPRLDGCAECG 157 >gi|269468622|gb|EEZ80266.1| recombinational DNA repair protein, RecF pathway [uncultured SUP05 cluster bacterium] Length = 207 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 27/212 (12%), Positives = 64/212 (30%), Gaps = 10/212 (4%) Query: 22 LEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKL 81 ++ +T+++G+ + + + +Q + +++ + K Sbjct: 1 MDFLTKEHGKIRLIAKGIRKSKTN--IQMFQCLNISFVGKGELKTLTNWEVDDVPRHLKS 58 Query: 82 LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKN 141 + L +Y + I L + E+Y + K S + E LL Sbjct: 59 EALILSMYVNELISRLLQEQDPHVELFEIYKKFVNQVGSLKQDSRH-WLLRMFENNLLAE 117 Query: 142 IGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADS 201 +G+ +D V + +S + K+L + + Sbjct: 118 LGYAVDFVVDVNGNEISQNSSYEYQQQAGFSQSSTGKISGKLLHQ----LSAGDVENRPN 173 Query: 202 LKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 L+ + LN+ L + + R F Sbjct: 174 LEQ-LKACRD-LNRQRLNPLLGNKPLKSRSLF 203 >gi|312130734|ref|YP_003998074.1| DNA repair protein reco [Leadbetterella byssophila DSM 17132] gi|311907280|gb|ADQ17721.1| DNA repair protein RecO [Leadbetterella byssophila DSM 17132] Length = 228 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 49/164 (29%), Gaps = 5/164 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVR----V 56 M + I+L Y E +II ++ T ++G +S + + + + V Sbjct: 1 MLHKTRGIVLNYIKYRETSIIAKIYTEEFGLQSYVENGVRSPKSKGRIALFQPLNLVDLV 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + A + G+ L L E L+ L Sbjct: 61 VYFKPQADIQRISEIKCTHPFFNIPTDIRKTTLGIFVGEILVLTLKENAGNPLLFSFLQE 120 Query: 117 FLNCHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 L + + + + L +GFG + + + ++ Sbjct: 121 ALIHLEHQDEGVENFHLYFLMTLSAYLGFGPHTAQDIRMALAEN 164 >gi|40063136|gb|AAR37983.1| DNA repair protein RecO [uncultured marine bacterium 561] Length = 259 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 63/208 (30%), Gaps = 11/208 (5%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH----RMQPILQAGNLVRVNWRS 60 + A +L R+YG+ +++++ GR V+ G+ +LQ + V Sbjct: 6 EPAWLLHRRNYGDSGFLVDILGLNSGRISAVVKGGRRKARGGSFAGVLQPFTPLLVATSG 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R + + L+ G L R LP+ C L+ + ++ Sbjct: 66 RGELKT---LSRLELAGAGVELAGERVFSGFYLNELLVRLLPKFVSCPTLFALYGGTIDA 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL--- 177 + + + ELMLL+ +G+GL + Sbjct: 123 L-VATEAELDLRKFELMLLEELGYGLRFDMDANNDPIEAANAYLYDPTAGFLPRAFGFDD 181 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSA 205 + ++ + L + Sbjct: 182 AWKKESRLQGDQLLNMADWLFNGDGLDG 209 >gi|150024377|ref|YP_001295203.1| DNA repair protein RecO [Flavobacterium psychrophilum JIP02/86] gi|254790522|sp|A6GWB0|RECO_FLAPJ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|149770918|emb|CAL42383.1| DNA repair protein RecO [Flavobacterium psychrophilum JIP02/86] Length = 238 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 55/155 (35%), Gaps = 5/155 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP----ILQAGNLVRV 56 M + AI++ Y EK++I++ T G FVR+ S + Q ++ + Sbjct: 1 MQIKTKAIVISAIKYQEKSLIVKCFTLSDGLKSYFVRDAFSSKKSNQKIAYFQPLTILEI 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLN 115 + L F+ + + + + + I L + E E + L Sbjct: 61 EAVHKNKGTLERFKEVKIATPFHSIHYDVIKSTIVIFISEILHHSIHEEEKNEAFFTFLE 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTK 150 L+ I + + L K +GF D++ Sbjct: 121 TALHWLDNHDQIANFHLILLLETTKYLGFYPDISN 155 >gi|293390945|ref|ZP_06635279.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951479|gb|EFE01598.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans D7S-1] Length = 108 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 41/110 (37%), Gaps = 5/110 (4%) Query: 10 LGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQNLG 67 L +SY E +++++++T +GR + ++ R + +LQ + + W R + Sbjct: 2 LHRKSYSETSLLIDLLTEDFGRISVLAKGARAKRSMLKGVLQPFTPLLLRWSGRGELKIL 61 Query: 68 EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + A L ++ G + R L +L+ Sbjct: 62 TKAEP---AAIALPLQNTALYSGFYLNELICRVLEPETAYPQLFQQYLQC 108 >gi|332652576|ref|ZP_08418321.1| DNA repair protein RecO [Ruminococcaceae bacterium D16] gi|332517722|gb|EGJ47325.1| DNA repair protein RecO [Ruminococcaceae bacterium D16] Length = 251 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 54/181 (29%), Gaps = 2/181 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M+ A++L +Y E + IL ++T++ G+ R + + LV ++ Sbjct: 3 MHLHTKALVLRETAYKESDKILTLLTQEQGKITASARGCRRKGSPLAAGSQLLVWSDFIL 62 Query: 61 RLAQNLGEFRFEVLE-SHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 Q + +E F G E P EL ++ L+ Sbjct: 63 YEYQGRWSVKEAEVEREFRGMREDLDKFSLGCYFGEVTQALALEGLPSPELLSLILNSLH 122 Query: 120 CHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + EL + G+ L C V G + + G C Sbjct: 123 ALDRLDRPLALVKGAFELRAMCLAGYEPVLDACAVCGCQPEEPRFHLREGVLHCARCRGE 182 Query: 179 Y 179 Sbjct: 183 V 183 >gi|256847127|ref|ZP_05552573.1| DNA repair protein RecO [Lactobacillus coleohominis 101-4-CHN] gi|256715791|gb|EEU30766.1| DNA repair protein RecO [Lactobacillus coleohominis 101-4-CHN] Length = 259 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 67/204 (32%), Gaps = 9/204 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSRLAQ 64 II+ R Y E++ +++++T + G + VR + +M + R + Sbjct: 10 GIIMNRRDYRERDQLVKILTDKQGPSMFLVRGARRKNFKMAADILPFTHGRYVSWLSSDR 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + + Y + + R + Y + L+ Sbjct: 70 LNYIVAAQETHQFRNIGDDITANAYATFILELVDRAFEDGHDIGAWYGQILAALHLINDG 129 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 I +E+ LL G + CV+ G Q L+ S GG +C + + Sbjct: 130 QDPQVIANVLEVQLLGRFGVMPEWRHCVICGQNQKLMDYSEAYGGLLCVNH---WDH--- 183 Query: 185 VLPSFLWKEEQTIDADSLKSAFQL 208 P L + +TI+ + L Sbjct: 184 -DPHRLHLDAKTINYLRFFATLNL 206 >gi|116492865|ref|YP_804600.1| DNA replication and repair protein RecO [Pediococcus pentosaceus ATCC 25745] gi|122265671|sp|Q03F64|RECO_PEDPA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|116103015|gb|ABJ68158.1| DNA replication and repair protein RecO [Pediococcus pentosaceus ATCC 25745] Length = 253 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 36/246 (14%), Positives = 88/246 (35%), Gaps = 20/246 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSRLAQ 64 I++ RS+ E +++++ +T+++G+ + F+RN + +++ + + + R Sbjct: 11 GIVMFERSHRENDLLVKFLTKEHGKRMFFIRNAKKVDFKLRSAILPFSHGQYTGLIRSNG 70 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 ++ +L Y + + + ++ +N L Sbjct: 71 LSYINAALDVQQFENIFQDITLNAYATFVLNLVDAAFDDNVKITSWFERINRALILIDAG 130 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 + I I++ LL + G + CV+ G T L S GG +C+S + Sbjct: 131 NDAEIITDLIQIQLLNSFGISITWDHCVICGRTDLPLDYSEAFGGMLCQSHWERDEHRWH 190 Query: 185 VLPS------------FLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENF 232 + P + +I ++ + + LT I+ R F Sbjct: 191 LKPKSARIIGILSAVSIFKLGQISISKETKQEIWNLTADIYKNQV----GINL-KSRS-F 244 Query: 233 LGKLLE 238 + ++ + Sbjct: 245 IDQMKK 250 >gi|315038511|ref|YP_004032079.1| DNA repair protein recO [Lactobacillus amylovorus GRL 1112] gi|325956927|ref|YP_004292339.1| DNA repair protein recO [Lactobacillus acidophilus 30SC] gi|312276644|gb|ADQ59284.1| DNA repair protein recO [Lactobacillus amylovorus GRL 1112] gi|325333492|gb|ADZ07400.1| DNA repair protein recO [Lactobacillus acidophilus 30SC] gi|327183707|gb|AEA32154.1| DNA repair protein recO [Lactobacillus amylovorus GRL 1118] Length = 250 Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 28/178 (15%), Positives = 59/178 (33%), Gaps = 2/178 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 II + Y E +++ ++MT+Q G V+ + + N + + + Sbjct: 9 QGIIFKRQKYKEADLLAKIMTKQDGIITLIVKGALRPKSRLSAATLNFSMGTYVIYTSGH 68 Query: 66 --LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ ++ + Y + E +P + YD+ L Sbjct: 69 GLSNLRTYKEVKQFDGLYQDLTKNAYASFIFDLIDHAFVEYQPIGKYYDLALFALKKINE 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I +++ +L G +L CV+ G + + S K GG +C Sbjct: 129 GVDCEMITQIVQMKMLSAYGVEPELRHCVICGKEKGIFDYSIKLGGVICSDHFGVVNS 186 >gi|158313952|ref|YP_001506460.1| DNA repair protein RecO [Frankia sp. EAN1pec] gi|158109357|gb|ABW11554.1| DNA repair protein RecO [Frankia sp. EAN1pec] Length = 262 Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 69/178 (38%), Gaps = 6/178 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+ ++L + E + ++ V+TR+ GR R + S R L+ G V + Sbjct: 23 YRDEGVVLRTAPFAEADRVVTVLTRRNGRVRAVARGVRRTSSRFGARLEPGTHVDLQLHE 82 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + + ++L ++ A + ++ L E L L + Sbjct: 83 GRSLDT-VTQADILGAYGATIAQEYARYTAAAVMLETAERLTSEERQPALRLFLLLVGGL 141 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + ++ LL+++ G+G+ L +C + G +S GG VC Sbjct: 142 RTLAGGERPPSLVLDAFLLRSLAVSGYGMALDECALCGEPGPHHSLSVPGGGVVCPEC 199 >gi|170782100|ref|YP_001710433.1| DNA repair protein RecO [Clavibacter michiganensis subsp. sepedonicus] gi|169156669|emb|CAQ01827.1| DNA repair protein RecO [Clavibacter michiganensis subsp. sepedonicus] Length = 309 Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 66/183 (36%), Gaps = 4/183 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++D+ ++L GE + I+ +++RQ+G+ + + + L+ + + Sbjct: 4 YRDEIVVLRTHKLGEADRIVTMLSRQHGKIRAVAKGVRRTQSKFGARLEPFMVADAQFFE 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 ++ + E + S+ A + + ++V + E E L+ Y +L L Sbjct: 64 GRTLDI-ITQAESIASYGALIAADYGSYTAASAMVETADRVTEDEGSLQQYLLLVGALRS 122 Query: 121 HKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + L L G+ C VTG + GG V + P Sbjct: 123 LSRREHGASLTLDSYLLRSLSMAGWAPSFQDCAVTGAPGPHSAFVVQLGGVVADAAAPPG 182 Query: 180 AEK 182 + + Sbjct: 183 SPR 185 >gi|299783169|gb|ADJ41167.1| DNA repair protein recO (Recombination protein O) [Lactobacillus fermentum CECT 5716] Length = 255 Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 60/185 (32%), Gaps = 2/185 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSRLA 63 + +I+ R Y E++++++++T + G + FVR + ++ + Sbjct: 9 EGVIMYRRDYRERDLLVKILTDRCGPLMFFVRGAKRKGFKLASDILPFTYGSYVGILADE 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + Y + + + E Y + LN Sbjct: 69 GLSYIVSAQETHHLTGIGADLNRNAYATYLLELVDQAFEEGRALGGWYKQVMAALNLINT 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + +E+ LL G +CVV G + L S K GG +C + Sbjct: 129 GRDPQVVVNVLEVQLLNRFGIAPVWDRCVVCGRSDLPLDYSEKMGGMLCLHHFAEDPYRF 188 Query: 184 LVLPS 188 + P Sbjct: 189 HLTPK 193 >gi|221068686|ref|ZP_03544791.1| DNA repair protein RecO [Comamonas testosteroni KF-1] gi|220713709|gb|EED69077.1| DNA repair protein RecO [Comamonas testosteroni KF-1] Length = 259 Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 56/155 (36%), Gaps = 8/155 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSR 61 + A IL + E ++ILEV TR GR + + +P+L +++++ Sbjct: 9 DEPAYILHQYDWSESSLILEVFTRHRGRVALAAKGVKRHTSNFRPVLLPLQPLKLSYTLG 68 Query: 62 LAQNLGEFRFEV-LESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 N + + + G+ L R L +P L+D+ + Sbjct: 69 AEGNAEIHTLKGAEWAGGHVMPQGDALWSGMYLNELLLRLLARDDPYAALFDIYAGVVRV 128 Query: 121 HKIPSV-----IGKIFVQIELMLLKNIGFGLDLTK 150 I + EL+LL+ +G DL + Sbjct: 129 LAGQHGGTTEAIEPVLRAFELVLLRELGHLPDLRQ 163 >gi|254785339|ref|YP_003072768.1| DNA repair protein RecO [Teredinibacter turnerae T7901] gi|237685975|gb|ACR13239.1| DNA repair protein RecO [Teredinibacter turnerae T7901] Length = 236 Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 58/188 (30%), Gaps = 7/188 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI-LQAGNLVRVNWRSRL 62 Q+ +L RS+ + IILE+ TRQ+G+ R R Q + V++ Sbjct: 7 QEVGFLLHSRSFTDSRIILELFTRQHGKLKAVHRLPSRKRQATTKPQPFIPLVVHYSGSG 66 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 ++ L + + GL L + LP L+ L Sbjct: 67 ELKN---LSDLETLSAPILGAGTSLFCGLYLNELLQKLLPVEFEYAGLFASYQRALLSLS 123 Query: 123 IPSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVSPKSGGAVCRSVGLPY 179 + EL LL +G+G++ + + + L Sbjct: 124 QAVPGEEDIPLREFELQLLAELGYGINFSMDTLGEAIGCNSERFYRFDPADGFTPTALNN 183 Query: 180 AEKMLVLP 187 + L+ Sbjct: 184 DRRALICS 191 >gi|332981251|ref|YP_004462692.1| DNA repair protein RecO [Mahella australiensis 50-1 BON] gi|332698929|gb|AEE95870.1| DNA repair protein RecO [Mahella australiensis 50-1 BON] Length = 244 Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 61/158 (38%), Gaps = 2/158 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 + +AI+L Y E + IL + +++ G+ + + + + ++ + V ++ Sbjct: 4 IKTEAIVLKHMDYLEADRILVLFSKELGKIHAIAKGSRRPKSRFLMASEIFVLADYMLYE 63 Query: 63 AQNLGEFRFEVLESHCAKLLSSS-LFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 +NL ++ +L + Y + + + EP ++ Y +L L Sbjct: 64 GKNLYTVTQSEVKCTFFELRQNMNNLAYAAYATNLCDAVIQDAEPNIKAYYLLLKTLQFL 123 Query: 122 KIPSVIG-KIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 P+ + + + L+ IG+ L +C G Sbjct: 124 SEPNTDASSLALIFAIKLMDFIGYRPLLDQCCDCGSDN 161 >gi|255656414|ref|ZP_05401823.1| DNA repair protein [Clostridium difficile QCD-23m63] gi|296878520|ref|ZP_06902525.1| recombination protein O [Clostridium difficile NAP07] gi|296430327|gb|EFH16169.1| recombination protein O [Clostridium difficile NAP07] Length = 257 Score = 79.1 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 62/188 (32%), Gaps = 4/188 (2%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M I+L Y E +IIL + TR+ G+ + + ++ + + N+ Sbjct: 1 MIILNTQGIVLKAIRYKESDIILTLFTRKLGKVSAIAKGAKKNKSSLLSSSQLFSYSNFT 60 Query: 60 -SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + + E+++S F Y + + E + L+ +L L Sbjct: 61 LKKQGNMYKVTQSEIIKSFYNISYDIEAFSYATYITKLVENSILENQTNNRLFILLAQTL 120 Query: 119 NCHKIPSVIG-KIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLWVSPKSGGAVCRSVG 176 + + I EL L IGF + KC+ + GG +C Sbjct: 121 YLYTQDNTDNRFITAAFELKFLDYIGFKPIVNKCINCECKILQNSVFNIYEGGILCSKCS 180 Query: 177 LPYAEKML 184 + + Sbjct: 181 KLFDNNIK 188 >gi|152967319|ref|YP_001363103.1| DNA repair protein RecO [Kineococcus radiotolerans SRS30216] gi|151361836|gb|ABS04839.1| DNA repair protein RecO [Kineococcus radiotolerans SRS30216] Length = 269 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 60/182 (32%), Gaps = 4/182 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+A++L GE + I+ ++TR +GR + + S R L+ V V Sbjct: 20 YRDEAVVLRTAKLGEADRIVSLLTRHHGRVRAVAKGVRRTSSRFGARLEPFTCVDVQLHR 79 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC-LELYDMLNIFLN 119 + + + + L+ G + RF + Y +L L Sbjct: 80 GRSLDTVTQADVLAPYGQVLVADYGLYTVGHALLETAERFTEVERETATQQYLLLVGALR 139 Query: 120 CHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + L L G+ C G + +GGAVC S P Sbjct: 140 SLSRREHDASLVLDAYLLRSLAVAGYAASFGDCARCGEAGPHAAFNVSAGGAVCPSCRPP 199 Query: 179 YA 180 + Sbjct: 200 GS 201 >gi|126700051|ref|YP_001088948.1| DNA repair protein [Clostridium difficile 630] gi|119361453|sp|Q182C0|RECO_CLOD6 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|115251488|emb|CAJ69321.1| DNA repair protein RecO (Recombination protein O) [Clostridium difficile] Length = 257 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 62/188 (32%), Gaps = 4/188 (2%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M I+L Y E +IIL + TR+ G+ + + ++ + + N+ Sbjct: 1 MIILNTQGIVLKAIRYKESDIILTLFTRKLGKVSAIAKGAKKNKSSLLSSSQLFSYSNFT 60 Query: 60 -SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + + E+++S F Y + + E + L+ +L L Sbjct: 61 LKKQGNMYKVTQSEIIKSFYNISYDIEAFSYATYITKLVENSILENQTNNRLFILLAQTL 120 Query: 119 NCHKIPSVIG-KIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLWVSPKSGGAVCRSVG 176 + + I EL L IGF + KC+ + GG +C Sbjct: 121 YLYTQDNTDNRFITAAFELKFLDYIGFKPIVNKCINCECKILQNSVFNIYEGGILCSKCS 180 Query: 177 LPYAEKML 184 + + Sbjct: 181 KLFDNNIK 188 >gi|260893580|ref|YP_003239677.1| DNA repair protein RecO [Ammonifex degensii KC4] gi|260865721|gb|ACX52827.1| DNA repair protein RecO [Ammonifex degensii KC4] Length = 246 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 50/155 (32%), Gaps = 3/155 (1%) Query: 1 MYWQ-DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M W + ++L V E + +L + + + G+ L G R + R + Sbjct: 1 MQWSCAEGVVLRVSPVREADRLLTIFSLERGKLLATAFGGARPRSRKRAATLPFCRARFF 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + + L L L Y + F P EP LY +L L Sbjct: 61 LKRRGDNYQVDQAELLERFPGLAHPRLLGYAGYLAEVVEGFSPLEEPNAPLYRLLVSSLR 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT 154 + + + LL+ G ++T C Sbjct: 121 WLRQNPELVAQAFCL--KLLRLGGLAPEMTACSSC 153 >gi|284030386|ref|YP_003380317.1| DNA repair protein RecO [Kribbella flavida DSM 17836] gi|283809679|gb|ADB31518.1| DNA repair protein RecO [Kribbella flavida DSM 17836] Length = 256 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 66/177 (37%), Gaps = 4/177 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+AI+L + GE + I ++TR +G+ V+ + S R L+ + V + + Sbjct: 4 YRDEAIVLRTQKLGEADRIATLLTRTHGKLRAVVKGVRRTSSRFGARLEPFSHVDLQLAT 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC-LELYDMLNIFLN 119 + ++ + + + + G + + R + E + + + +L L Sbjct: 64 GRSLDVVTQAVSIAAYGEGIVSDYARYTTGTVLLETVDRLVVEEKEPATQQHLLLAGALR 123 Query: 120 CHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 ++ L L G+ C G +P +GG VC + Sbjct: 124 VLSTGEREPRLVLDSFLLRSLAISGYAPSFGDCAKCGEPGPHRAFNPAAGGMVCTTC 180 >gi|309811037|ref|ZP_07704835.1| DNA repair protein RecO [Dermacoccus sp. Ellin185] gi|308435001|gb|EFP58835.1| DNA repair protein RecO [Dermacoccus sp. Ellin185] Length = 269 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 27/193 (13%), Positives = 61/193 (31%), Gaps = 3/193 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D AI+L GE + I+ ++TR G+ + + + + L+ G +V + Sbjct: 5 YRDAAIVLRTHKLGEADRIITMLTRNRGKKRAVAKGVRKTKSKFGARLEPGMVVDIQLHE 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 ++ + A + + R + + + +++L L Sbjct: 65 GRNLDVVTQVDLLASYGDAIAQDYPSYTACAAMLETADRLCEDSDRVVAHFNLLAGALAA 124 Query: 121 HKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + + + G+ C G + GGAVC P Sbjct: 125 LAQRQIPAHLVLDAYLVRSVATAGWTPSFIDCAGCGDPGPQRAFNLAVGGAVCPQCRPPG 184 Query: 180 AEKMLVLPSFLWK 192 + + L Sbjct: 185 STAPMPETFVLMD 197 >gi|257055406|ref|YP_003133238.1| DNA repair protein RecO [Saccharomonospora viridis DSM 43017] gi|256585278|gb|ACU96411.1| DNA replication and repair protein RecO [Saccharomonospora viridis DSM 43017] Length = 283 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 71/183 (38%), Gaps = 6/183 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++D ++L GE + I+ ++TR++G+ + + R L+ V V + + Sbjct: 4 YRDTGVVLRGHKLGEADRIITLLTRRHGKVRAVAKGVRRTTSRFGARLEPFGHVDVQFYT 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 ++ + E +++ ++ +I L E L L + Sbjct: 64 GRTLDV-ITQVETVDAFALPIVGDYQRYTAASAITETADRLTAEEGQPALKLYLLVVGAL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + ++ LL+++ G+ +T+C G + ++GG++C + Sbjct: 123 RALAEGRRDASLVLDAFLLRSMAFAGWAPAITECARCGQPGPHGAFNVQAGGSLCSRCRV 182 Query: 178 PYA 180 P + Sbjct: 183 PGS 185 >gi|319952749|ref|YP_004164016.1| DNA repair protein reco [Cellulophaga algicola DSM 14237] gi|319421409|gb|ADV48518.1| DNA repair protein recO [Cellulophaga algicola DSM 14237] Length = 239 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 48/152 (31%), Gaps = 5/152 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ----PILQAGNLVRV 56 M AI+L YG+ ++I+++ T G ++ + + Q + + Sbjct: 1 MQVTTKAIVLSALKYGDTSLIVKIFTASDGLKSYLLKGVFASKKGKLKTAYFQPLMQLEL 60 Query: 57 NWRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + L R + + + + L + E E L++ L Sbjct: 61 VAYHKNKGTLETVREAKPSYHYQSLHTDITKNALTFFLAEMLSNSIQEEEDNANLFEFLE 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLD 147 L I + ++L K GF D Sbjct: 121 ASLQWLDANEEISNFHLYFLILLTKYFGFYPD 152 >gi|126658910|ref|ZP_01730053.1| DNA repair protein RecO [Cyanothece sp. CCY0110] gi|126619860|gb|EAZ90586.1| DNA repair protein RecO [Cyanothece sp. CCY0110] Length = 279 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 74/236 (31%), Gaps = 13/236 (5%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN-WRS 60 +Q IIL + E + ++ +++ +YG V + + + + V + Sbjct: 5 IYQATGIILKGMPFQEADRLVTLLSPEYGLIRAIVPGARKQKSKLRGRCELFVINELLIA 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + E LES+ + + +P LELY++LN L Sbjct: 65 KGRSLDKITQAETLESYPGLSKDLGKLAAAQYLAELVLNLALDEQPQLELYELLNEHLRR 124 Query: 121 HKIPSVIGKIFVQIE---LMLLKNIGFGLDLTKCVVTG-----VTQDLLWVSPKSGGAVC 172 + S+ ++ + LL G G + C +T D W S A Sbjct: 125 LERMSLAESLYGYLAQAVFHLLAIAGIGPQVHYCCITQEELSPNFNDPSWCVGFSFDAGG 184 Query: 173 RSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL 228 ++ + I+ S L + LN+ L H Sbjct: 185 LINLAIRDKEKNNPNPIVLP---VINHRLKASELTLLQH-LNQSFLPHPGKILPSN 236 >gi|320095930|ref|ZP_08027551.1| DNA repair protein RecO [Actinomyces sp. oral taxon 178 str. F0338] gi|319977139|gb|EFW08861.1| DNA repair protein RecO [Actinomyces sp. oral taxon 178 str. F0338] Length = 207 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 66/202 (32%), Gaps = 4/202 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+AI+L GE + I+ ++T ++G+ + + S + L+ ++V V Sbjct: 5 YRDEAIVLRTHKLGEADRIITLLTAEHGQVRAVAKGVRRTSSKFGARLEPFSVVDVQAHR 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREP--CLELYDMLNIFL 118 + + + A L++ G + R + + + +L Sbjct: 65 GRSLDTITQVESLALHGDAIAADYDLYVAGTVIVEAAERLTADSDAAGHSQYLLLLGALH 124 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 K I L L G+ C G S GGAVC + P Sbjct: 125 ALAKRRHDPTLIRTSYLLRALALAGWAPSCYDCANCGAAGPHSAFSIAEGGAVCAACRPP 184 Query: 179 YAEKMLVLPSFLWKEEQTIDAD 200 A L + + D Sbjct: 185 GAASPSPDAMALMGDLLSGDWA 206 >gi|254976027|ref|ZP_05272499.1| DNA repair protein [Clostridium difficile QCD-66c26] gi|255093415|ref|ZP_05322893.1| DNA repair protein [Clostridium difficile CIP 107932] gi|255101593|ref|ZP_05330570.1| DNA repair protein [Clostridium difficile QCD-63q42] gi|255307462|ref|ZP_05351633.1| DNA repair protein [Clostridium difficile ATCC 43255] gi|255315160|ref|ZP_05356743.1| DNA repair protein [Clostridium difficile QCD-76w55] gi|255517829|ref|ZP_05385505.1| DNA repair protein [Clostridium difficile QCD-97b34] gi|255650945|ref|ZP_05397847.1| DNA repair protein [Clostridium difficile QCD-37x79] gi|260684015|ref|YP_003215300.1| DNA repair protein [Clostridium difficile CD196] gi|260687675|ref|YP_003218809.1| DNA repair protein [Clostridium difficile R20291] gi|260210178|emb|CBA64370.1| DNA repair protein [Clostridium difficile CD196] gi|260213692|emb|CBE05562.1| DNA repair protein [Clostridium difficile R20291] Length = 257 Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 62/188 (32%), Gaps = 4/188 (2%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M I+L Y E +IIL + TR+ G+ + + ++ + + N+ Sbjct: 1 MIILNTQGIVLKAIRYKESDIILTLFTRKLGKVSAIAKGAKKNKSSLLSSSQLFSYSNFT 60 Query: 60 -SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + + E+++S F Y + + E + L+ +L L Sbjct: 61 LKKQGNMYKVTQSEIIKSFYNISYDIEAFSYATYITKLVENSILENQTNNRLFILLAQTL 120 Query: 119 NCHKIPSVIG-KIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLWVSPKSGGAVCRSVG 176 + + I EL L IGF + KC+ + GG +C Sbjct: 121 YLYTQDNTDNRFITAAFELKFLDYIGFKPIVNKCINCECKILQNSVFNIYEGGILCSKCS 180 Query: 177 LPYAEKML 184 + + Sbjct: 181 KLFDNNIK 188 >gi|270291316|ref|ZP_06197538.1| DNA repair protein RecO [Pediococcus acidilactici 7_4] gi|304385066|ref|ZP_07367412.1| recombination protein O [Pediococcus acidilactici DSM 20284] gi|270280162|gb|EFA25998.1| DNA repair protein RecO [Pediococcus acidilactici 7_4] gi|304329260|gb|EFL96480.1| recombination protein O [Pediococcus acidilactici DSM 20284] Length = 253 Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 65/172 (37%), Gaps = 2/172 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSRLA 63 +++ +++ E +++++ +TR+YG+ + F++N + +++ + R + R Sbjct: 10 TGMVMFAKNHRENDLLVKFLTREYGKRMFFIKNAKKKDFKLRSAILPFTHGRYSGLIRSN 69 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ L Y + + + +D L L Sbjct: 70 GLSYINAALDVKQFENIFQDIELNAYATFLLNLVDAAFDDNFKIEAWFDRLARALTLIDA 129 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + I I++ LL + G + CVV G L S GG +C++ Sbjct: 130 GNDAEVITDLIQIQLLNSFGIAIVWDHCVVCGRRDLALDYSESRGGMLCQNH 181 >gi|281424994|ref|ZP_06255907.1| DNA repair protein RecO [Prevotella oris F0302] gi|281400838|gb|EFB31669.1| DNA repair protein RecO [Prevotella oris F0302] Length = 240 Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 49/156 (31%), Gaps = 5/156 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + AI+L +GE ++++++T Q GR R S R + Q ++ V Sbjct: 1 MVIKTKAIVLHAFKFGENKMMIDLLTEQQGRVTFAARISNSPRAKVKKQYFQPFAVLDVE 60 Query: 58 WRSRLA-QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R + + S + + L++ + Sbjct: 61 YDYRQKATIQTFIHVGIAYPLGSIPFDSYKLSISFFLAELTAYATRDEQTNAPLFNYIVS 120 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKC 151 + F + LL+ +GF +L Sbjct: 121 SIEWLDSCGTTFSNFHLVYIVHLLRFLGFYPNLEAY 156 >gi|121534211|ref|ZP_01666036.1| DNA repair protein RecO [Thermosinus carboxydivorans Nor1] gi|121307314|gb|EAX48231.1| DNA repair protein RecO [Thermosinus carboxydivorans Nor1] Length = 248 Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 37/194 (19%), Positives = 70/194 (36%), Gaps = 5/194 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 + +AI+L VR G + ++ + +RQYG+ + + LQ + V + Sbjct: 4 EYSVEAILLTVRDCGTADRMVTLFSRQYGKIAAVAFGARRPKSSFAGCLQPFSHVDLLLV 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + E++ H +Y + PE +P E++++L L+ Sbjct: 64 -RNRGGECIRQCEIIRGHRKLREELPRMVYTALVAEIVTELWPEHQPDPEVFELLLDVLS 122 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDL-LWVSPKSGGAVCRSVGLP 178 + + +L GF + +CV G L + +GG +C + G Sbjct: 123 ALEERNPRVAAIAAAWQLL-ALAGFAPEYRRCVACGSGVSLPAHFNIGAGGVMCPACGGS 181 Query: 179 YAEKMLVLPSFLWK 192 A L K Sbjct: 182 QASFTEGQADLLTK 195 >gi|332881941|ref|ZP_08449583.1| DNA repair protein RecO [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680176|gb|EGJ53131.1| DNA repair protein RecO [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 239 Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 52/167 (31%), Gaps = 4/167 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ----PILQAGNLVRV 56 MY + A++L Y + ++I+ TR+YG ++ + Q + + Sbjct: 1 MYQKTSALVLSAMKYADNSLIVRCFTREYGGCSYLLKGILKPSKSALKVGLFQPLAQLAL 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + +V+ + + + + P + L+D L+ Sbjct: 61 VATYKEGALSYIKEAKVIHPYSTLHTHPYKSVVTIFLSEVCAQICQPDTPDIPLFDFLSE 120 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV 163 L ++ L L + +GF D T + + Sbjct: 121 QLYRLDTTDYNPHFHLKFLLSLTRLLGFYPDTTHDHLPYFNIEEGIF 167 >gi|299142180|ref|ZP_07035313.1| DNA repair protein RecO [Prevotella oris C735] gi|298576269|gb|EFI48142.1| DNA repair protein RecO [Prevotella oris C735] Length = 240 Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 49/156 (31%), Gaps = 5/156 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + AI+L +GE ++++++T Q GR R S R + Q ++ V Sbjct: 1 MVIKTKAIVLHAFKFGENKMMIDLLTEQQGRVTFAARISNSPRAKVKKQYFQPFAVLDVE 60 Query: 58 WRSRLA-QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R + + S + + L++ + Sbjct: 61 YDYRQKATIQTFIHVGIAYPLGSIPFDSYKLSISFFLAELTAYATRDEQTNAPLFNYIVS 120 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKC 151 + F + LL+ +GF +L Sbjct: 121 SIEWLDSCGTTFSNFHLVYIVHLLRFLGFYPNLEAY 156 >gi|119961429|ref|YP_947965.1| DNA repair protein RecO [Arthrobacter aurescens TC1] gi|119948288|gb|ABM07199.1| putative DNA repair protein RecO [Arthrobacter aurescens TC1] Length = 277 Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 30/204 (14%), Positives = 63/204 (30%), Gaps = 8/204 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++DDA++L GE + I+ ++T+ +G+ + + S R L+ + + S Sbjct: 38 YRDDAVVLRTHKLGEADRIITLLTKHHGQVRAVAKGVRRTSSRFGARLEPFMVADLQLVS 97 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC-LELYDMLNIFLN 119 ++ + F + Y++L L Sbjct: 98 GRTLDIVTQAVAKGAYGSSIAADYGRFTVAAAMTETAEKLTDADTESGTAQYNLLVGALA 157 Query: 120 CHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 ++ ++ LL+ + G+ T+C G + GG VC Sbjct: 158 ALSRSDHPPEL--ILDSYLLRALATGGWAPSFTECARCGRPGPHTAFAAPIGGMVCSDCR 215 Query: 177 LPYAEKMLVLPSFLWKEEQTIDAD 200 P + L T + Sbjct: 216 PPGSPAPAPETVVLLGALLTGNWS 239 >gi|124008226|ref|ZP_01692923.1| DNA repair protein RecO [Microscilla marina ATCC 23134] gi|123986325|gb|EAY26147.1| DNA repair protein RecO [Microscilla marina ATCC 23134] Length = 233 Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 51/175 (29%), Gaps = 7/175 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVR----- 55 M + I++ Y E +II ++ T + G + +S++ + + Sbjct: 1 MLKKTRGIVIHYTKYSETSIIAKIFTEEMGMKTYIINGVRSNKNGSKIALYQPLTLLDMV 60 Query: 56 VNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 V ++ + L L + L E E L+D L Sbjct: 61 VYYKQNTSNIQRISEARCHVPFHNIPFDFQKSTIALFIAEVLSKALREEEENHLLFDFLL 120 Query: 116 IFLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 L + F + + +GF + V+ + VS S Sbjct: 121 NALVWFDDTQKDFRAFHLQFLAKMPRFLGFDPQ-SADVMIAEVNNQRPVSFPSTK 174 >gi|320527306|ref|ZP_08028491.1| DNA repair protein RecO [Solobacterium moorei F0204] gi|320132330|gb|EFW24875.1| DNA repair protein RecO [Solobacterium moorei F0204] Length = 250 Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 64/195 (32%), Gaps = 7/195 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + +L Y E ++IL V+T++YG+ + + + + + + Sbjct: 1 MNDRITGFVLKQSDYREADVILTVLTKEYGKLSFVAQGVRKMTSKNAGSIMPYTKTEILF 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP----EREPCLELYDML 114 + + + + + + L L + Y L Sbjct: 61 DYNETKTIFRLKNARCKEYYRSMHEDIAASSAAAVAAELINVLTLQASSDMTNSDEYAFL 120 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 +I + + + + +L+ G D+ CV G T ++ VSPK GG +C+ Sbjct: 121 DIVFSKLDEGYDPTLVLSLLFVDMLELAGLLPDVDACVTCGNTH-VVTVSPKDGGFLCQE 179 Query: 175 VGLPYAEKMLVLPSF 189 + + Sbjct: 180 HAEEHHIPFMKTEDL 194 >gi|161507650|ref|YP_001577604.1| DNA repair protein RecO [Lactobacillus helveticus DPC 4571] gi|172048291|sp|A8YVM6|RECO_LACH4 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|160348639|gb|ABX27313.1| DNA repair protein RecO [Lactobacillus helveticus DPC 4571] Length = 250 Score = 78.7 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 63/185 (34%), Gaps = 2/185 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 II + Y E +++ ++MT+Q G V+ + Q N + + + Sbjct: 9 QGIIFKRQKYKEADLLAKIMTKQDGIITLIVKGALRPKSQLSAATLNFSMGTYVIYTSGH 68 Query: 66 --LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ ++ + Y + E +P + YD+ L Sbjct: 69 GLSNLRTYKEVKQFDGLYRDLTKNAYTSFIFDLIDHAFVEYQPLGKYYDLAVFALKKIDA 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I +++ +L G +L CV+ G + + S K GG VC ++ Sbjct: 129 GVDNEMITQIVQMKMLSAFGVEPELRHCVICGKERGVFDYSIKLGGIVCSDHFAKVNSRL 188 Query: 184 LVLPS 188 + P Sbjct: 189 HLTPK 193 >gi|331269997|ref|YP_004396489.1| DNA repair protein RecO [Clostridium botulinum BKT015925] gi|329126547|gb|AEB76492.1| DNA repair protein RecO [Clostridium botulinum BKT015925] Length = 238 Score = 78.7 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 52/162 (32%), Gaps = 2/162 (1%) Query: 10 LGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SRLAQNLGE 68 L + Y E + ++ + T + G+ + + ++ + + + R Sbjct: 2 LKTQDYKENDKLVWLFTEKIGKICAIAKGAKKNKSKFMSSTQAFCFGEYVLFRGKSLYNI 61 Query: 69 FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI- 127 ++++S L YG + L + E EL+ K ++ Sbjct: 62 NEIDIIDSFQDLLKDMDTITYGSYFCELILIALEQEESNRELFKDFIKSFYFIKNKAMDL 121 Query: 128 GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 + EL LL G+G D KC + G + Sbjct: 122 EILARTFELKLLNATGYGFDFEKCCICGKKINKSNYLSIQYY 163 >gi|299530661|ref|ZP_07044076.1| DNA repair protein RecO [Comamonas testosteroni S44] gi|298721177|gb|EFI62119.1| DNA repair protein RecO [Comamonas testosteroni S44] Length = 259 Score = 78.7 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 55/155 (35%), Gaps = 8/155 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSR 61 + A IL + E ++ILEV TR GR + + +P+L +++++ Sbjct: 9 DEPAYILHQYDWSESSLILEVFTRHRGRVALAAKGVKRHTSNFRPVLLPLQPLKLSYTLG 68 Query: 62 LAQNLGEFRFEV-LESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 N + + G+ L R L +P L+D+ + Sbjct: 69 AEGNAEIHSLKGAEWVGGHVMPQGDALWSGMYLNELLLRLLARDDPYTALFDIYAGVVRV 128 Query: 121 HKIPSV-----IGKIFVQIELMLLKNIGFGLDLTK 150 I + EL+LL+ +G DL + Sbjct: 129 LAGQHGGTTEAIEPVLRAFELVLLRELGHLPDLRQ 163 >gi|81428489|ref|YP_395489.1| DNA repair protein O [Lactobacillus sakei subsp. sakei 23K] gi|90103522|sp|Q38XA1|RECO_LACSS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|78610131|emb|CAI55180.1| DNA repair protein O [Lactobacillus sakei subsp. sakei 23K] Length = 272 Score = 78.7 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 62/171 (36%), Gaps = 2/171 (1%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS--RLAQ 64 +++ ++Y EK+++++++T ++G+ + ++R + + + + R Sbjct: 11 GLVMYRKNYKEKDMLVKILTDRFGKKMFYLRGANKPKFRLSAAILPFTQAEYGGDIRDDG 70 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + L Y + + P+ EP YD + LN Sbjct: 71 LSFLNNVKSATQFQTISQDLFLNAYATYILNLIDVGFPDSEPLGIWYDKVEQALNLIDEG 130 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 I IE+ LL+ G L C V G T S GG +C+ Sbjct: 131 FDAAMITHIIEIQLLQVFGVQPQLQGCAVCGRTDLAFDYSESYGGLLCQRH 181 >gi|146298469|ref|YP_001193060.1| DNA repair protein RecO [Flavobacterium johnsoniae UW101] gi|254790554|sp|A5FM31|RECO_FLAJ1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|146152887|gb|ABQ03741.1| DNA repair protein RecO [Flavobacterium johnsoniae UW101] Length = 237 Score = 78.7 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 54/155 (34%), Gaps = 5/155 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP----ILQAGNLVRV 56 M + AI++ + EK++I++ T G FVR+ S R Q +++ + Sbjct: 1 MQIKTKAIVISSLKFQEKSLIVKCFTLSNGLKSYFVRDAFSSRKASQKIAYFQPLSILEI 60 Query: 57 NWRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + L F+ + + L + E E L+ L Sbjct: 61 EAVHKNKGTLENFKEIKTAVPFQTIHTDIFKSTIVMFLSEMLHYSIQEEEKNEPLFVFLE 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTK 150 L I + + L + K +GF D+++ Sbjct: 121 TALTWLDHHDDISNFHLILLLEITKYLGFYPDVSE 155 >gi|332529449|ref|ZP_08405408.1| DNA repair protein RecO [Hylemonella gracilis ATCC 19624] gi|332041095|gb|EGI77462.1| DNA repair protein RecO [Hylemonella gracilis ATCC 19624] Length = 249 Score = 78.3 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 5/124 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSR 61 ++ A +L + E ++ILEV TR +GR + + +P+L +R+ + Sbjct: 8 EEPAFVLHRYDWSESSLILEVFTRHHGRVALAAKGVKRPTSNFRPVLLPLQPLRLGYAGE 67 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + + L G L R L +P L+D+ + Sbjct: 68 GEVRT---LKSAEWAGGHVMPTGESLLSGYYLNELLIRLLARDDPHPALFDIYAQVVRLL 124 Query: 122 KIPS 125 Sbjct: 125 ASEH 128 >gi|256832763|ref|YP_003161490.1| DNA repair protein RecO [Jonesia denitrificans DSM 20603] gi|256686294|gb|ACV09187.1| DNA repair protein RecO [Jonesia denitrificans DSM 20603] Length = 251 Score = 78.3 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 77/234 (32%), Gaps = 22/234 (9%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++DDA++L + GE + I+ ++TR++G+ + + R L+ + V Sbjct: 4 YRDDAVVLRAQKLGEADRIITLLTREHGKVRAVGKGVRRTGSRFGARLEPFMHIDVQLNE 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + + ++ + ++V L E + + Sbjct: 64 -GRTFDVVTQVDTIGAYARDICIDYGRYTVAGALVETADRLVVAEREPSVQQFWLLAGAL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVC----- 172 + S + ++ LL+ G+ C G S +GGAVC Sbjct: 123 RTLASQQVPADLILDSYLLRAFAVAGYAPSFDVCAQCGAPGPHTAFSVAAGGAVCARCRP 182 Query: 173 RSVGLPYAEKMLVLPSFLWKE-EQTIDADS--------LKSAFQLTDYFLNKYA 217 P + + + L E + + L +AF T Y L + Sbjct: 183 PGSASPASGTFTHMAALLAGEWGVVLSSSDRHVREARGLIAAF--TQYHLERTI 234 >gi|193211824|ref|YP_001997777.1| DNA repair protein RecO [Chlorobaculum parvum NCIB 8327] gi|238692677|sp|B3QRD3|RECO_CHLP8 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|193085301|gb|ACF10577.1| DNA repair protein RecO [Chlorobaculum parvum NCIB 8327] Length = 260 Score = 78.3 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 61/159 (38%), Gaps = 4/159 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M + A++L Y +++ I ++TR+YG+ ++ G+S + + + GNL+ Sbjct: 1 MIVKTRAVVLRDIKYRDQSKICLLLTREYGQVSVILKGGRSAKSKTGMLFSPGNLIDAVL 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP-EREPCLELYDMLNIF 117 + ++L L L ++ L R+ E + L+ ++ Sbjct: 61 YKKGNRDLQLASDASLVKSPLSETPDLERFSVLYRVLDLVRYASGPEEKNVPLFTLVAAT 120 Query: 118 LNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + I L L+ +GF L +CV + Sbjct: 121 IERLCDTERDFQPILAGFLLRLVSVLGFTPALKRCVFSN 159 >gi|253681466|ref|ZP_04862263.1| DNA repair protein RecO [Clostridium botulinum D str. 1873] gi|253561178|gb|EES90630.1| DNA repair protein RecO [Clostridium botulinum D str. 1873] Length = 238 Score = 78.3 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 57/169 (33%), Gaps = 3/169 (1%) Query: 10 LGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SRLAQNLGE 68 L + Y E + ++ + T + G+ + + ++ + + + R Sbjct: 2 LKTQDYKENDKLVWLFTEKIGKVCAIAKGAKKNKSKFMSSTQVFCFGEYVLFRGKSLYNI 61 Query: 69 FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI- 127 ++++S L YG + L + E EL+ K ++ Sbjct: 62 NEIDIIDSFQNLLKDMDTITYGSYFCELILIALEQEESNRELFKDFIKSFYFIKNKAMDL 121 Query: 128 GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV-SPKSGGAVCRSV 175 + EL LL G+G D KC + G + S + G VC Sbjct: 122 EILARTFELKLLNASGYGFDFQKCCICGKKINKSNYLSIQYYGGVCSEC 170 >gi|218777906|ref|YP_002429224.1| DNA repair protein RecO [Desulfatibacillum alkenivorans AK-01] gi|226737860|sp|B8FKE1|RECO_DESAA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|218759290|gb|ACL01756.1| DNA repair protein RecO [Desulfatibacillum alkenivorans AK-01] Length = 258 Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 33/252 (13%), Positives = 74/252 (29%), Gaps = 18/252 (7%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS- 60 A+IL YG+ ++I+ T+ G+ +N + R L+ + V + + Sbjct: 5 TTSAVILRSIEYGDFDLIVTFFTQAQGKRAALAKNARKSFKRFGGALELFSKVSIVYAHG 64 Query: 61 -RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + + + ++ + E E++ +L L Sbjct: 65 KKKGGLPLLSESNLEQHFSNIRMDIHKTALASLWAETIYSWAEEEHAQEEIFQLLIRSLE 124 Query: 120 CHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 K+ + L L G L +CV+ + + + P Sbjct: 125 NLDNEKVDRDKVNILFLLRFLALAGLSPSLDQCVLCCRSLEDWGQGGICFDHARGGIVCP 184 Query: 179 YAEKMLVLPSFLWKEEQT----IDADSLKSA--FQLTDYFLNK------YALQHNIIHCH 226 L L ++ L +A +L+ +++ L +++ Sbjct: 185 KCGVCLAPGPVLSVGAVKQLLWLNKGDLAAAGRMKLSREAMDRGRDLLESFLAYHLGKEP 244 Query: 227 LLRENFLGKLLE 238 FL L Sbjct: 245 KS-LRFLKDLRR 255 >gi|226323778|ref|ZP_03799296.1| hypothetical protein COPCOM_01553 [Coprococcus comes ATCC 27758] gi|225207962|gb|EEG90316.1| hypothetical protein COPCOM_01553 [Coprococcus comes ATCC 27758] Length = 280 Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 68/212 (32%), Gaps = 3/212 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 +IL V GE + + ++T++ G+ F + + + +N Sbjct: 38 TGMILSVAPIGEYDKRVVILTKEKGKISAFAKGARRPNSPLAGACTPCNFGKFMLYEGRN 97 Query: 66 LGEFRFEVLESHCAKLLSSSL-FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH-KI 123 + +E++ A+L + Y + + E E+ +L + K Sbjct: 98 SNTLQSAEIENYFAELRTDVEAAYYAFYFLEFADFYTREANDEREMLKLLYQTMRVLTKK 157 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP-YAEK 182 + EL L G G + +CV G + S K GG VC G Y Sbjct: 158 IIPFELVRYIFELKALSVSGEGPQVFQCVRCGNRERPCVFSVKEGGLVCSECGQNVYDGM 217 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLN 214 L + + F L+D L Sbjct: 218 RLNTSTLYAMQFIVGTPVEKLYTFTLSDEVLK 249 >gi|223940465|ref|ZP_03632316.1| DNA repair protein RecO [bacterium Ellin514] gi|223890868|gb|EEF57378.1| DNA repair protein RecO [bacterium Ellin514] Length = 210 Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 52/154 (33%), Gaps = 3/154 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNW 58 M IIL R + + I+ +T +GR + + + L L ++ Sbjct: 1 MIENATGIILRTRPLTDTSFIIHWLTPDFGRLATVAKGARRAKSPFAGKLDLFYLADFSF 60 Query: 59 -RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 RSR ++ + ++H L + + P E +++++ F Sbjct: 61 LRSRRSELHNLREVNLKDTHAGLRRELDYVLQASYCTALVEQTTEMETPLPETFELMSGF 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKC 151 L + ++ E+ LL G DL Sbjct: 121 LKHLPQHPPLPQMLFGFEVKLLSEQGLQPDLEND 154 >gi|284052146|ref|ZP_06382356.1| DNA repair protein RecO [Arthrospira platensis str. Paraca] Length = 286 Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 57/188 (30%), Gaps = 10/188 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RSR 61 ++ IIL GE + +L ++T ++G + R + G V W ++ Sbjct: 5 YKATGIILKAIPLGESDRLLTILTPEFGLMRVVAPGARKSRSRLGGTTGLFVVNQWLIAK 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + E++ SH + G + +P EL+ +L+ L+ Sbjct: 65 GRSLDKITQAEIINSHSGLAKNLGKLAAGQYLAELVLSQALSEQPQPELFLLLSEHLDRL 124 Query: 122 KIPSVIGKIFVQIE---------LMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + I+ LL G + C +T + P Sbjct: 125 EELPNTSTEENAIDIVARLTHGIFHLLAWAGIAPQVQLCCLTQHPLNPNLSDPNWLVGFS 184 Query: 173 RSVGLPYA 180 + G Sbjct: 185 LAAGGIIN 192 >gi|308271397|emb|CBX28005.1| DNA repair protein recO [uncultured Desulfobacterium sp.] Length = 258 Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 28/233 (12%), Positives = 72/233 (30%), Gaps = 21/233 (9%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW-RSRL 62 AIIL +G+ ++IL + G+ ++ + R IL+ +++R+ ++ Sbjct: 8 PAIILRRVDFGDYDLILTFFSLNKGKISAIAKSAKKSTKRFGGILELFSVLRLVCSTAKG 67 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + L +++ S Y + + +Y +L L+ Sbjct: 68 RELLVLQEADLINSFSCIRGDLKKTAYASYFAELINEWSETGSEQEGIYRLLYFVLDQLD 127 Query: 123 -IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT-----GVTQDLLWVSPKSGGAVCRSVG 176 + + ++ +G +L+ C + +D + GG +C+ Sbjct: 128 ICRIPEEILSIIFQMRFADIVGVRPNLSVCTDCRIEIDRIKEDRVAFDFSKGGIICQKCA 187 Query: 177 LPYAEKMLVLP------------SFLWKEEQTIDADSLKSAFQLTDYFLNKYA 217 + + + S+K + F+ + Sbjct: 188 CISVNRFFLSKGTIKQLLWVESGDLSKAAKIRFTPSSVKEGLGFLESFITYHI 240 >gi|260101320|ref|ZP_05751557.1| DNA repair protein RecO [Lactobacillus helveticus DSM 20075] gi|260084905|gb|EEW69025.1| DNA repair protein RecO [Lactobacillus helveticus DSM 20075] gi|328465882|gb|EGF37065.1| DNA repair protein recO [Lactobacillus helveticus MTCC 5463] Length = 250 Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 64/185 (34%), Gaps = 2/185 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 II + Y E +++ ++MT+Q G V+ + Q N + + + Sbjct: 9 QGIIFKRQKYKEADLLAKIMTKQDGIITLIVKGALRPKSQLSAATLNFSMGTYVIYTSGH 68 Query: 66 --LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ ++ + Y + E +P + YD+ L Sbjct: 69 GLSNLRTYKEVKQFDGLYRDLTKNAYTSFIFDLIDHAFVEYQPLGKYYDLAVFALKKIDA 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I +++ +L G +L CV+ G + + S K GG VC + ++ Sbjct: 129 GVDNEMITQIVQMKMLSAFGVEPELRHCVICGKERGVFDYSIKLGGIVCSNHFAKINSRL 188 Query: 184 LVLPS 188 + P Sbjct: 189 HLTPK 193 >gi|264677120|ref|YP_003277026.1| pyridoxal phosphate biosynthetic protein PdxJ [Comamonas testosteroni CNB-2] gi|262207632|gb|ACY31730.1| Pyridoxal phosphate biosynthetic protein PdxJ [Comamonas testosteroni CNB-2] Length = 516 Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 55/155 (35%), Gaps = 8/155 (5%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSR 61 + A IL + E ++ILEV TR GR + + +P+L +++++ Sbjct: 9 DEPAYILHQYDWSESSLILEVFTRHRGRVALAAKGVKRHTSNFRPVLLPLQPLKLSYTLG 68 Query: 62 LAQNLGEFRFEV-LESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 N + + G+ L R L +P L+D+ + Sbjct: 69 AEGNAEIHSLKGAEWVGGHVMPQGDALWSGMYLNELLLRLLARDDPYTALFDIYAGVVRV 128 Query: 121 HKIPSV-----IGKIFVQIELMLLKNIGFGLDLTK 150 I + EL+LL+ +G DL + Sbjct: 129 LAGQHGGTTEAIEPVLRAFELVLLRELGHLPDLRQ 163 >gi|312881716|ref|ZP_07741493.1| DNA repair protein RecO [Vibrio caribbenthicus ATCC BAA-2122] gi|309370606|gb|EFP98081.1| DNA repair protein RecO [Vibrio caribbenthicus ATCC BAA-2122] Length = 208 Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 58/210 (27%), Gaps = 11/210 (5%) Query: 32 HLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLY 89 + +S R + LQ + + W A LS Sbjct: 1 MSILSKGARSKRSSLKGALQPFTPLLLKWSGNGALKTLREAEP---ISLGLPLSGINLYS 57 Query: 90 GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLT 149 G + R L + P L+ L + + EL LL +G+G+D Sbjct: 58 GFYINELIGRVLAQEVPMPGLFHDYLHALTELAQSNNPEPALRRFELSLLAAMGYGVDFL 117 Query: 150 KCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLT 209 C +G D + E + D LKSA + T Sbjct: 118 HCAGSGEMVDPEMTYRYREQKGFIASVRKDHLSFYGSELIAISERRFTTPDQLKSAKRFT 177 Query: 210 DYFLNKYALQHNIIHCH-LLRENFLGKLLE 238 + AL+ ++ RE F + Sbjct: 178 -----RVALKPYLLGKPLKSRELFFKMFSK 202 >gi|163787115|ref|ZP_02181562.1| DNA repair protein [Flavobacteriales bacterium ALC-1] gi|159877003|gb|EDP71060.1| DNA repair protein [Flavobacteriales bacterium ALC-1] Length = 239 Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 71/233 (30%), Gaps = 8/233 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP----ILQAGNLVRV 56 M +++I+L Y + ++I++ T+Q G +R + QA + +++ Sbjct: 1 MLTTNNSIVLSKLKYRDYDLIVKCYTQQRGVVSYILRGVLKSKKGQTKTVYFQALSQLQI 60 Query: 57 NWRSRLAQNLGEFRFEVLE-SHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + Q+L + L + + + L L L E E +L++ + Sbjct: 61 EENYKPNQSLHSIKEVKLNYIYKSLHTNIYKSAIVLFLSEILSNVLKEEEKNEDLFNYIK 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L + L L + +GF + + + G Sbjct: 121 TALQYLDSEDNFSNFHLLFLLKLTRYLGFQPENLNDSYPYFNLESGVFEASNQGIHSIFG 180 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL 228 K L+ +F + I+A + Y+ L Sbjct: 181 ANLTLLKRLLGTNFDALDSIKINAKQRHEFLNMLLYYFE---LHLGNFKKPKS 230 >gi|156741638|ref|YP_001431767.1| DNA repair protein RecO [Roseiflexus castenholzii DSM 13941] gi|156232966|gb|ABU57749.1| DNA repair protein RecO [Roseiflexus castenholzii DSM 13941] Length = 266 Score = 78.3 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 71/212 (33%), Gaps = 7/212 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++ +AII+ GE + +L ++T G+ + + R+ ++ + Sbjct: 2 YRCEAIIIRRSDSGEADRVLTILTPS-GKQRVIAKGARKIHSRLAGHIELFTHTTLMLAI 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + L+ + + R + E +++L L Sbjct: 61 -GRNLHIVTQSSPLDRFEHLRADLERIGAAYYAAELVDRLIAEESENRRAFELLLGALRA 119 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVCRSVGLP 178 + I EL LL +G+ L +C GV T+ SP +GGA+C Sbjct: 120 LNAGAAIDLTLRAYELHLLDAVGYRPQLYECAACGVRLTEATDRFSPAAGGALCPQCAGA 179 Query: 179 YAEKM-LVLPSFLWKEEQTIDADSLKSAFQLT 209 + + L +F I + +++ Sbjct: 180 DRRALPMRLSTFKLLRYMQIQPPEIAGELRVS 211 >gi|146296962|ref|YP_001180733.1| DNA repair protein RecO [Caldicellulosiruptor saccharolyticus DSM 8903] gi|166221888|sp|A4XKV7|RECO_CALS8 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|145410538|gb|ABP67542.1| DNA replication and repair protein RecO [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 244 Score = 78.3 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 66/184 (35%), Gaps = 4/184 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 + I+L ++ E + IL + T + G+ +N + + + Q + Sbjct: 4 IKAKGIVLKDVNFEESSKILTIFTSELGKIQALSKNCRRTLSPLGAVSQPLIYSEFVFT- 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + V+ES + L +Y I + F+ + ++ +L L Sbjct: 63 KTKEIYSISSASVIESFFDITQNVDLTIYSSYLIELVDSFIQIEQKNEDILRLLLNSLYM 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVSPKSGGAVCRSVGLPY 179 K + + E+ +L GF T+CV + ++ S K+ G VC Sbjct: 123 LKKGADPETVCRIFEIKMLIFTGFFPQFTQCVKCQKSNLSRIFFSFKNAGVVCAECKEEN 182 Query: 180 AEKM 183 ++ Sbjct: 183 DMEI 186 >gi|126662644|ref|ZP_01733643.1| DNA repair protein [Flavobacteria bacterium BAL38] gi|126626023|gb|EAZ96712.1| DNA repair protein [Flavobacteria bacterium BAL38] Length = 237 Score = 78.3 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 37/244 (15%), Positives = 76/244 (31%), Gaps = 14/244 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP----ILQAGNLVRV 56 M + AI+L + EK++I++ T G FV++ S++ Q ++ + Sbjct: 1 MLVKTKAIVLSSLKFQEKSLIVKCFTESDGLKSYFVQSAYSNKKANQKIAYFQPLTIIEI 60 Query: 57 NWRSRLAQNLGEFRFEVL-ESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + L F+ L S+ + L + E E L+ L Sbjct: 61 EANHKNKGTLEHFKEIRLAHSYYTINTDIVKSTIVIFLSEILHHAIKEEEKNQNLFSFLE 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L + + + L + K +GF D+++ SP + Sbjct: 121 TALLWLDTHDEMANFHLILLLEVTKYLGFYPDVSEMDFNFFDTKEASFSPFQSVNTLSAH 180 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGK 235 ++++ L ++ + ++ F Y L L Sbjct: 181 ETQLFKRLIDLKFDSNQKVFAGIERQIL--LKILLDF---YTLHLEGFKKPKS----LDI 231 Query: 236 LLEL 239 L E+ Sbjct: 232 LKEV 235 >gi|291565919|dbj|BAI88191.1| DNA repair protein RecO [Arthrospira platensis NIES-39] Length = 298 Score = 78.3 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 57/188 (30%), Gaps = 10/188 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RSR 61 ++ IIL GE + +L ++T ++G + R + G V W ++ Sbjct: 5 YKATGIILKAIPLGESDRLLTILTPEFGLMRVVAPGARKSRSRLGGTTGLFVVNQWLIAK 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + E++ SH + G + +P EL+ +L+ L+ Sbjct: 65 GRSLDKITQAEIINSHSGLAKNLGKLAAGQYLAELVLSQALSEQPQPELFLLLSEHLDRL 124 Query: 122 KIPSVIGKIFVQIE---------LMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + I+ LL G + C +T + P Sbjct: 125 EELPNTSTEENAIDIVARLTHGIFHLLAWAGIAPQVQLCCLTQHPLNPNLSDPNWLVGFS 184 Query: 173 RSVGLPYA 180 + G Sbjct: 185 LAAGGIIN 192 >gi|281421055|ref|ZP_06252054.1| DNA repair protein RecO [Prevotella copri DSM 18205] gi|281404973|gb|EFB35653.1| DNA repair protein RecO [Prevotella copri DSM 18205] Length = 241 Score = 78.3 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 54/155 (34%), Gaps = 5/155 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + AI+L YG+ +I++ T + GR VR +S + + + Q ++ + Sbjct: 1 MEIKTSAIVLQAIKYGDSQLIVDFFTEKLGRLSFMVRVPKSSKGKMKRQLFQPLMVLNLE 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKL-LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R NL R ++ + + S + L + LY + Sbjct: 61 FDYRPKSNLQRLRDVSIQIPFSDIPFSPYKLGISMFLAELLSYATRHEQANGALYLFIQD 120 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTK 150 + F + L ++GF ++ Sbjct: 121 SIEWLDHAKGAIANFHIVFMIQLSFHLGFMPNIES 155 >gi|293604016|ref|ZP_06686429.1| DNA repair protein RecO [Achromobacter piechaudii ATCC 43553] gi|292817620|gb|EFF76688.1| DNA repair protein RecO [Achromobacter piechaudii ATCC 43553] Length = 181 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 52/140 (37%), Gaps = 6/140 (4%) Query: 10 LGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQNLG 67 L ++ E ++I++ +R +G + + +P+L A + ++W Sbjct: 2 LHATAWRETSLIVQTFSRDHGCVAMVAKGAKRPYSVLRPVLSAFQPLLLSWTGNGEVKT- 60 Query: 68 EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI 127 E + L+ + + L R LP + L+D ++ L + Sbjct: 61 ---LTRAEIAGIRPLTGTALMSAWYMNELLLRLLPREDAHPLLFDAYDMALQQLSNGTRA 117 Query: 128 GKIFVQIELMLLKNIGFGLD 147 + E LL+ G+G+D Sbjct: 118 AGALRRFEWTLLRETGYGVD 137 >gi|94266117|ref|ZP_01289832.1| Recombination protein O, RecO [delta proteobacterium MLMS-1] gi|93453314|gb|EAT03754.1| Recombination protein O, RecO [delta proteobacterium MLMS-1] Length = 255 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 57/159 (35%), Gaps = 7/159 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW---RS 60 Q A++L V SYGE + I+ R G+ G + R++ + + + Sbjct: 5 QTSAVVLAVSSYGESDKIVTFYGRDSGKLSGIAKGANRSRIRFVNKLELFSLLELSYEPG 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R + + + E+ + + + RF E +P ++ +L L+ Sbjct: 65 RSSGLVRIDQAELSQPFATIRRDYHRYSAAALAGELAARFSGEGDPDGRIFQLLLWVLHT 124 Query: 121 HKIPSVI----GKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + E LL +G+ DL+ C G Sbjct: 125 IADCTRPTLELPPCLIFFETKLLALLGYAPDLSGCRRCG 163 >gi|296119857|ref|ZP_06838411.1| DNA repair protein RecO [Corynebacterium ammoniagenes DSM 20306] gi|295967011|gb|EFG80282.1| DNA repair protein RecO [Corynebacterium ammoniagenes DSM 20306] Length = 230 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 56/172 (32%), Gaps = 4/172 (2%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLAQNL 66 ++ +GE + ++ ++T+ +G + + + + LQ + V S Sbjct: 2 VIRSYDFGEADRVIVLLTKNHGLVRAVAKGVRRAKSRFGSRLQLFVNLDVQLYS-GRNLA 60 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 + + ++ A+++ ++ L LY+++ L+ + Sbjct: 61 TITQADTVDYFGAQIIDDYDKYTAACVMLEAAERLSLDH-DPFLYELVVATLSTLQGSEQ 119 Query: 127 IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 L + + G+ L C G P GGA C P Sbjct: 120 PMLELDAFLLKAMAHAGWAPSLFNCAQCGAPGPHHAFHPAIGGAACGKCRPP 171 >gi|293189544|ref|ZP_06608264.1| DNA repair protein RecO [Actinomyces odontolyticus F0309] gi|292821634|gb|EFF80573.1| DNA repair protein RecO [Actinomyces odontolyticus F0309] Length = 245 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 63/203 (31%), Gaps = 6/203 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++D+AI+L GE + I+ ++T ++G+ + + + ++ +++ Sbjct: 4 YRDEAIVLRTHKLGEADRIITLLTAEHGQVRAVAKGVRKTTSKFGARVEPFSVIDAQLH- 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP---EREPCLELYDMLNIF 117 R + + + + ++ +V L + +L Sbjct: 63 RGRTLDTLTQVASIAQYGDAIAANYDLYLAATVVVETAERLTADAHDGTHSQYLLLLGAL 122 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + I L L G+ C V G S GG VC + Sbjct: 123 NALARGRHDPTLIRTSYTLRALALAGWAPSCFDCAVCGTQGPHTSFSIPDGGTVCDTCRP 182 Query: 178 PYAEKMLVLPSFLWKEEQTIDAD 200 P A L + + D + Sbjct: 183 PGASSPAPDTVALLGQLLSGDWE 205 >gi|154509426|ref|ZP_02045068.1| hypothetical protein ACTODO_01957 [Actinomyces odontolyticus ATCC 17982] gi|153799060|gb|EDN81480.1| hypothetical protein ACTODO_01957 [Actinomyces odontolyticus ATCC 17982] Length = 245 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 64/202 (31%), Gaps = 4/202 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++D+AI+L GE + I+ ++T ++G+ + + + ++ +++ Sbjct: 4 YRDEAIVLRTHKLGEADRIITLLTAEHGQVRAVAKGVRKTTSKFGARVEPFSVIDAQLHR 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL--PEREPCLELYDMLNIFL 118 + +++ A + L+L + R + +L Sbjct: 64 GRTLDTLTQVASIVQYGDAIAANYDLYLAATVVVETAERLTADAHDGTHSQYLLLLGALN 123 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + I L L G+ C V G S GG VC + P Sbjct: 124 ALARGRHDPTLIRTSYTLRALALAGWAPSCFDCAVCGTQGPHTSFSIPDGGTVCDTCRPP 183 Query: 179 YAEKMLVLPSFLWKEEQTIDAD 200 A L + + D + Sbjct: 184 GASSPAPDTVALLGQLLSGDWE 205 >gi|220912716|ref|YP_002488025.1| DNA repair protein RecO [Arthrobacter chlorophenolicus A6] gi|219859594|gb|ACL39936.1| DNA repair protein RecO [Arthrobacter chlorophenolicus A6] Length = 250 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 70/212 (33%), Gaps = 8/212 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++DDA++L GE + I+ ++T+++G+ + + S R L+ +V + S Sbjct: 11 YRDDAVVLRTHKLGEADRIITLLTKRHGQVRAVAKGVRRTSSRFGARLEPFMVVDLQLIS 70 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER-EPCLELYDMLNIFLN 119 + ++ + + + E Y++L L Sbjct: 71 GRSLDIVTQAVAKGAYGGSIAADYGRYTVAAAMTETAEKLTDVDGEAATAQYNLLVGALA 130 Query: 120 CHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + ++ LL+ + G+ T C G+ + GG VC Sbjct: 131 ALSRDEHAAGL--ILDSYLLRALATGGWAPSFTDCARCGMPGPHRAFATALGGMVCPDCR 188 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQL 208 P + L T D + ++ L Sbjct: 189 PPGSPAPAAETVILLAALLTGDWPTADASLPL 220 >gi|94264354|ref|ZP_01288146.1| Recombination protein O, RecO [delta proteobacterium MLMS-1] gi|93455248|gb|EAT05461.1| Recombination protein O, RecO [delta proteobacterium MLMS-1] Length = 255 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 61/159 (38%), Gaps = 7/159 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI--LQAGNLVRVNW-RS 60 + A++L V SYGE + I+ G+ G + R++ + L+ +L+ + + Sbjct: 5 RTSAVVLAVSSYGESDKIVTFYGHDTGKLSGIAKGANRSRIRFVNKLELFSLLELYYEPG 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R + + + E+ + + + RF E +P ++ +L L+ Sbjct: 65 RSSGLVRIDQAELSQPFATIRRDYHRYSAAALAGELAARFSGEGDPDGRIFQLLLWVLHT 124 Query: 121 HKIPSVI----GKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + E LL +G+ DL+ C G Sbjct: 125 IADCTRPTLELPPCLIFFETKLLALLGYAPDLSGCRRCG 163 >gi|317485409|ref|ZP_07944288.1| DNA repair protein RecO [Bilophila wadsworthia 3_1_6] gi|316923368|gb|EFV44575.1| DNA repair protein RecO [Bilophila wadsworthia 3_1_6] Length = 256 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 5/180 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M W D A++LGV + E ++ L ++TR++G F G R + L N ++++ Sbjct: 1 MEWSDTALVLGVGRFRESDLWLRMLTRRHGIVSAFAFGGSRSRKRFCGCLDLFNELQIST 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL--PEREPCLELYDMLNI 116 ++ + L +L + L + V L P+ + + Sbjct: 61 KTTRNGMYLSLQEGNLIRGPRRLRTDWNRLGMFMNCVRFVEALGVPQDGAAGVFLLLKDT 120 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVSPKSGGAVCRSV 175 + +V + + L L G+ LT CV G D G VC Sbjct: 121 LELLEQSETVQDILPILFRLRLASQQGYAPALTACVSCGKKDFDHAGFLVSEGTIVCPDC 180 >gi|209527697|ref|ZP_03276194.1| DNA repair protein RecO [Arthrospira maxima CS-328] gi|209491869|gb|EDZ92227.1| DNA repair protein RecO [Arthrospira maxima CS-328] Length = 298 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 56/188 (29%), Gaps = 10/188 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RSR 61 ++ IIL GE + +L ++T ++G + R + G V W ++ Sbjct: 5 YKATGIILKAIPLGESDRLLTILTPEFGLMRVVAPGARKSRSRLGGTTGLFVVNQWLIAK 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + E++ SH + G + +P EL+ +L+ L+ Sbjct: 65 GRSLDKITQAEIINSHSGLAKNLGKLAAGQYLAELVLSQALSEQPQPELFLLLSEHLDRL 124 Query: 122 KIPSVIGKIFV---------QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + LL G + C +T + + P Sbjct: 125 EGLPNTSTEENAIGIVARLTHGIFHLLAWAGIAPQVQLCCLTQHPLNPNFSDPNWLVGFS 184 Query: 173 RSVGLPYA 180 + G Sbjct: 185 LAAGGIIN 192 >gi|77405230|ref|ZP_00782327.1| DNA repair protein RecO [Streptococcus agalactiae H36B] gi|77176126|gb|EAO78898.1| DNA repair protein RecO [Streptococcus agalactiae H36B] Length = 243 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 26/190 (13%), Positives = 59/190 (31%) Query: 11 GVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFR 70 R+Y E + ++++ T G+ + FV++ + +LQ + + Sbjct: 2 YNRNYREDDKLVKIFTETEGKRMFFVKHASKSKFNAVLQPLTIAHFILKINDNGLSYIDD 61 Query: 71 FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKI 130 ++ + + Y + + +L+ L L + + Sbjct: 62 YKEVLAFQEINSDLFKLSYASYITSLADVAISDNVADAQLFIFLKKTLELIEDGLDYEIL 121 Query: 131 FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFL 190 E+ LL+ G L+ CV S K G +C + + + P+ L Sbjct: 122 TNIFEVQLLERFGVALNFHDCVFCHRAGLPFDFSHKYSGLLCPNHYYKDERRNHLDPNML 181 Query: 191 WKEEQTIDAD 200 + Sbjct: 182 HLINRFQSIQ 191 >gi|239917730|ref|YP_002957288.1| DNA replication and repair protein RecO [Micrococcus luteus NCTC 2665] gi|281413776|ref|ZP_06245518.1| DNA replication and repair protein RecO [Micrococcus luteus NCTC 2665] gi|239838937|gb|ACS30734.1| DNA replication and repair protein RecO [Micrococcus luteus NCTC 2665] Length = 273 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 27/204 (13%), Positives = 61/204 (29%), Gaps = 5/204 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++ +AI+L GE + I+E +T + G + + S R+ +++ + Sbjct: 21 FRTEAIVLRTHRLGEADRIVEALTPEQGLVRAVAKGVRKTSSRLGSVVEPFMHSTLQLAR 80 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + ++L + L + ++ +P + Sbjct: 81 GRGELHTVSQAQLLHPYATMLAADYDAYTVAGALAEAVERVPAVDDGGRRAQYRLFHGAL 140 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + + LL+ + G+ +C G + GG VC Sbjct: 141 AALARGAHDPRLILHSFLLRALAQAGWAPTFDRCARCGAPGPHTALHVGLGGDVCPECRP 200 Query: 178 PYAEKMLVLPSFLWKEEQTIDADS 201 P A L D + Sbjct: 201 PGAAHPAPETFDLLSALAAGDWAT 224 >gi|77411229|ref|ZP_00787580.1| DNA repair protein RecO [Streptococcus agalactiae CJB111] gi|77162752|gb|EAO73712.1| DNA repair protein RecO [Streptococcus agalactiae CJB111] Length = 243 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 26/190 (13%), Positives = 60/190 (31%) Query: 11 GVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFR 70 R+Y E + ++++ T G+ + FV++ + +LQ + + Sbjct: 2 YNRNYREDDKLVKIFTETEGKRMFFVKHASKSKFNAVLQPLTIAHFILKINDNGLSYIDD 61 Query: 71 FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKI 130 ++ + + Y + + +L+ L L + + Sbjct: 62 YKEVLAFQEINSDLFKLSYASYITSLADVAISDNVADAQLFIFLKKTLELIEDGLDYEIL 121 Query: 131 FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFL 190 E+ LL+ G L+ CV S K G +C + + + P+ L Sbjct: 122 TNIFEVQLLERFGVALNFHDCVFCHRAGLPFDFSHKYSGLLCPNHYYKDERRNHLDPNML 181 Query: 191 WKEEQTIDAD 200 + + Sbjct: 182 YLINRFQSIQ 191 >gi|296140451|ref|YP_003647694.1| DNA repair protein RecO [Tsukamurella paurometabola DSM 20162] gi|296028585|gb|ADG79355.1| DNA repair protein RecO [Tsukamurella paurometabola DSM 20162] Length = 270 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 59/180 (32%), Gaps = 5/180 (2%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M ++D A++L GE + IL ++TR+ G + + R + + V+ + Sbjct: 4 MRSYRDSAVVLRQHKLGEADYILTLLTRENGLVRAVAKGVRRPRSRFGARLELFAHVDLQ 63 Query: 60 SRLA-QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE--PCLELYDMLNI 116 + + ++ L +++ L E P EL+ + Sbjct: 64 LYPGRNLDTVTQVHSIAAYSGDLAGDYGRYTTACAVIETAERLAGEERAPAPELHRLTVG 123 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L + + L + G+ L C G T +GGAVC Sbjct: 124 ALRAIAAGLRDRDLILISFLLRAMDAAGWAPALDLCARCGDTGPHRAFHVAAGGAVCVHC 183 >gi|271963862|ref|YP_003338058.1| DNA replication and repair protein RecO [Streptosporangium roseum DSM 43021] gi|270507037|gb|ACZ85315.1| DNA replication and repair protein RecO [Streptosporangium roseum DSM 43021] Length = 245 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 56/158 (35%), Gaps = 6/158 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++DD I+L GE + I+ V+TR+ G+ G + + R L+ V + + Sbjct: 4 YRDDGIVLRTHKLGEADRIVTVLTRRTGKIRGVAKGVRRTMSRFGARLEPFTHVDLQLHT 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 ++ + A + + G + R L E L L + Sbjct: 64 GRTLDVITQAETIRPYGEALVTDYPRYTAGSAMLETADR-LTLGEKEPSLRQFLLLVGGL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTG 155 + S + + ++ L+++ G+ L C Sbjct: 123 RTLGSGEHEPRLVLDAYFLRSLAVAGYAPALEACARCK 160 >gi|119358324|ref|YP_912968.1| DNA repair protein RecO [Chlorobium phaeobacteroides DSM 266] gi|229485532|sp|A1BJG7|RECO_CHLPD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119355673|gb|ABL66544.1| DNA replication and repair protein RecO [Chlorobium phaeobacteroides DSM 266] Length = 261 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 61/159 (38%), Gaps = 4/159 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M + AI+L Y +++ I + TR++G ++ G++ + + AG ++ + Sbjct: 1 MIVKTRAIVLREIRYRDQSKICSLFTREFGLLSVIIKGGRNPKSKLAGRFIAGTVLDIVL 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIF 117 + + + L + I+ L + + +E + L+ ++ Sbjct: 61 YKKTTREIQLVSEGNLLFSPMVPQPDIERYAIMYRIIDLVSQSIDGQEKNIPLFSLIASV 120 Query: 118 LNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 L ++ L L+ +GF + +CV++ Sbjct: 121 LEELYSTSDRFRLLYSWFLLKLVSLLGFEPSIHRCVLSH 159 >gi|291299550|ref|YP_003510828.1| DNA repair protein RecO [Stackebrandtia nassauensis DSM 44728] gi|290568770|gb|ADD41735.1| DNA repair protein RecO [Stackebrandtia nassauensis DSM 44728] Length = 251 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 63/183 (34%), Gaps = 9/183 (4%) Query: 1 MY---WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVR 55 M ++DDA++L V GE + I+ ++ R GR + + S + L + Sbjct: 1 MQRKFFRDDAVVLRVHKLGEADHIVSMLGRNSGRMRAVAKGVRRTSSKFGARLAPFGHID 60 Query: 56 VNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 V + ++ + ++ +I L E L Sbjct: 61 VQLIE-GRNLHTVTQVVGIDLYGRNIVRDYQSYTAACAISETAERLTPEEHEPSLRIFQL 119 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + + ++ LL+ + G+ LT+C + G + S +GG VC Sbjct: 120 TLGALRALSDAEHAATLVLDAYLLRTMGVSGWAPALTECALCGAAGEHRAFSVAAGGCVC 179 Query: 173 RSV 175 RS Sbjct: 180 RSC 182 >gi|227548796|ref|ZP_03978845.1| DNA repair protein RecO [Corynebacterium lipophiloflavum DSM 44291] gi|227079126|gb|EEI17089.1| DNA repair protein RecO [Corynebacterium lipophiloflavum DSM 44291] Length = 241 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 67/182 (36%), Gaps = 4/182 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++D A ++ +GE + ++ ++TR +G + + R + + V ++ + Sbjct: 7 YRDRAFVVRTYDFGEADRVVVLLTRHHGLVRSVAKGVRKSRSRFGSRIQPFVDIDVQLYP 66 Query: 63 AQNLGEFRFEVLESHCA-KLLSSSLFLYGLQSIVPLFRFLPEREPC--LELYDMLNIFLN 119 +NL ++ A +++ +I+ L + L+D L Sbjct: 67 GRNLATITAADTVAYFAGRIIEDFDRYAAGCAILEAAEKLSYSDAERGSSLFDATRDALE 126 Query: 120 CHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + P + L ++ G+G+ L C S +GGAVC + P Sbjct: 127 QLQSPEQHPTLVLDAFILRATEHAGWGVSLFHCANCQAPGPHKAFSAPTGGAVCNNCRPP 186 Query: 179 YA 180 + Sbjct: 187 GS 188 >gi|240145040|ref|ZP_04743641.1| DNA repair protein RecO [Roseburia intestinalis L1-82] gi|257202865|gb|EEV01150.1| DNA repair protein RecO [Roseburia intestinalis L1-82] Length = 254 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 29/202 (14%), Positives = 66/202 (32%), Gaps = 3/202 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++L V G+ + + ++T++ G+ F + + + A + ++ Sbjct: 8 TGMVLKVMPIGDYDRRITLLTKERGKITAFAKGARRPNSALVAAATPFSFGEFEMFEGRS 67 Query: 66 LGEFRFEVLESHCAKL-LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH-KI 123 ++++ ++ YG + + E E+ +L L Sbjct: 68 SYTVVRASIQNYFREVQEELEATYYGCYFLEFADYYCQENNDEREMLKLLYQSLRALTSA 127 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + EL + G ++ CV G ++L W + GG +C + Sbjct: 128 AYDKRLVRFIFELKAMAVNGEAPNVFSCVRCGEKENLRWFVTRRGGCICETCKKK-DPSP 186 Query: 184 LVLPSFLWKEEQTIDADSLKSA 205 FL +E + SA Sbjct: 187 EESGRFLLEESTLYTMQYIISA 208 >gi|256372044|ref|YP_003109868.1| DNA repair protein RecO [Acidimicrobium ferrooxidans DSM 10331] gi|256008628|gb|ACU54195.1| DNA repair protein RecO [Acidimicrobium ferrooxidans DSM 10331] Length = 249 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 76/199 (38%), Gaps = 2/199 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWR 59 ++D A++L GE++ + ++TR++G+ VR + R++ I+Q ++ V Sbjct: 4 RYRDLAVVLRTWPLGERDRLALLLTREHGKVRATVRGARAARSRLRGIVQPSAVLDVECW 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + V + + + ++ L L E + L Sbjct: 64 RGRELDGVAQAQLVAANLAGRGDLDPDTVGWCYELLDLADGLSEDGHGDDALFALLARGL 123 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + ++F + L ++ GFG L +C G +L + P S A C + G Sbjct: 124 GLLVEAPSRELFAALTLRAVQLAGFGPSLDRCGSCGAEGELTRIDPASQQARCDACGGVA 183 Query: 180 AEKMLVLPSFLWKEEQTID 198 + + L E +T D Sbjct: 184 IGVPAMRAARLVLEGRTRD 202 >gi|313818468|gb|EFS56182.1| DNA repair protein RecO [Propionibacterium acnes HL046PA2] Length = 443 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 55/172 (31%), Gaps = 8/172 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D A++L GE + I+ +++R++G L R + S + L NLV + Sbjct: 21 YRDQAVVLRTHKLGEADRIVSMLSREHGNILPLARGIRRTSSKFGARLDPFNLVDLQLVQ 80 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC-LELYDMLNIFLN 119 ++ + SLF + +P Y +L L Sbjct: 81 GRNLDVVAQVECLHPYSAPLRQDYSLFTAAEVMVEAADHLVPVDREPAPAQYRLLAGALR 140 Query: 120 CH-----KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 P + L L G+ DL CV G SP Sbjct: 141 VLGQGTTDGPRPPEMVLDSYLLRSLSASGYAPDLVDCVRCGTPGPHQGFSPS 192 >gi|87200674|ref|YP_497931.1| recombinational DNA repair protein (RecF pathway)-like [Novosphingobium aromaticivorans DSM 12444] gi|87136355|gb|ABD27097.1| Recombinational DNA repair protein (RecF pathway)-like protein [Novosphingobium aromaticivorans DSM 12444] Length = 202 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 3/148 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + AI+ VR +GE ++ +MT ++G +V + ++P+L GNL+ R Sbjct: 1 MQIRAPAILCSVRPHGEHGAVVRLMTEEHGLAAAYVAGARGRELRPLLIPGNLLEAEVRG 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R A L R E++ S L + LPE P LYD L L+ Sbjct: 61 RAASQLPSARLELVASRGPWLTEPLPSAGIGWACALTAATLPEGHPYPLLYDSLGALLDA 120 Query: 121 HK---IPSVIGKIFVQIELMLLKNIGFG 145 ++ E++LL+ +G+G Sbjct: 121 ICLAPSARGWARVLAGYEVLLLREVGYG 148 >gi|255327483|ref|ZP_05368550.1| DNA repair protein RecO [Rothia mucilaginosa ATCC 25296] gi|255295377|gb|EET74727.1| DNA repair protein RecO [Rothia mucilaginosa ATCC 25296] Length = 283 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 56/158 (35%), Gaps = 4/158 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 W+D A+IL + GE + I+ ++TR G + + + L+ +++ Sbjct: 7 WRDAALILRTQKLGETDRIIIMLTRDGGITHAVAKAVRKPTSKFGGRLEPFMHTDLSFSR 66 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCL-ELYDMLNIFLN 119 + L ++ A ++++ +I L L + ++Y + + L Sbjct: 67 GRTNLHTITQAATLHAYTAPIMANYNAYTCASTIAELAEALTKDTDSTADIYTLTHGALA 126 Query: 120 CHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + I + + G+ L C G Sbjct: 127 ALAHGQHVPQRILTRYLARSMNAAGWPLIGENCTRCGN 164 >gi|291535365|emb|CBL08477.1| DNA replication and repair protein RecO [Roseburia intestinalis M50/1] Length = 254 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 29/202 (14%), Positives = 66/202 (32%), Gaps = 3/202 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++L V G+ + + ++T++ G+ F + + + A + ++ Sbjct: 8 TGMVLKVMPIGDYDRRITLLTKERGKITAFAKGARRPNSALVAAATPFSFGEFEMFEGRS 67 Query: 66 LGEFRFEVLESHCAKL-LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH-KI 123 ++++ ++ YG + + E E+ +L L Sbjct: 68 SYTVVRASIQNYFREVQEELEATYYGCYFLEFADYYCQENNDEREMLKLLYQSLRALTSA 127 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + EL + G ++ CV G ++L W + GG +C + Sbjct: 128 AYDKRLVRFIFELKAMAVNGEAPNVFSCVRCGEKENLRWFMTRRGGCICETCEKK-DPSP 186 Query: 184 LVLPSFLWKEEQTIDADSLKSA 205 FL +E + SA Sbjct: 187 EESGRFLLEESTLYTMQYIISA 208 >gi|283458099|ref|YP_003362713.1| recombinational DNA repair protein [Rothia mucilaginosa DY-18] gi|283134128|dbj|BAI64893.1| recombinational DNA repair protein [Rothia mucilaginosa DY-18] Length = 309 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 56/158 (35%), Gaps = 4/158 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 W+D A+IL + GE + I+ ++TR G + + + L+ +++ Sbjct: 33 WRDAALILRTQKLGETDRIIIMLTRDGGITHAVAKAVRKPTSKFGGRLEPFMHTDLSFSR 92 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCL-ELYDMLNIFLN 119 + L ++ A ++++ +I L L + ++Y + + L Sbjct: 93 GRTNLHTITQAATLHAYTAPIMANYDAYTCASTIAELAEALTKDTDSTADIYTLTHGALA 152 Query: 120 CHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + I + + G+ L C G Sbjct: 153 ALAHGQHVPQRILTRYLARSMNAAGWPLIGENCTRCGN 190 >gi|326803487|ref|YP_004321305.1| DNA repair protein RecO [Aerococcus urinae ACS-120-V-Col10a] gi|326650240|gb|AEA00423.1| DNA repair protein RecO [Aerococcus urinae ACS-120-V-Col10a] Length = 255 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 62/172 (36%), Gaps = 2/172 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 I+L R Y EK++++++ T+ YG+ + FVRN + VR + + Sbjct: 9 PGIVLYQRPYKEKDLLVKIFTQPYGKRMFFVRNIHKPNNVLKQPSFAFVRAEYIGTINDR 68 Query: 66 LGEFRFEVLESHCA--KLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 F EV + Y + +P+RE L+ L L+ + Sbjct: 69 GFSFLKEVKSMTFPKHTMSDLEAMAYASYLCHLVDASMPDREVDQVLFTQLEQALDKIET 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 I +E+ LL G L C + Q + S G +C+ Sbjct: 129 GFNPAIISNILEVQLLAKFGVMPQLHACQICQEDQGIFDFSVIFDGLLCQKH 180 >gi|294674977|ref|YP_003575593.1| DNA repair protein RecO [Prevotella ruminicola 23] gi|294473236|gb|ADE82625.1| putative DNA repair protein RecO [Prevotella ruminicola 23] Length = 241 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 55/163 (33%), Gaps = 5/163 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFV---RNGQSHRMQPILQAGNLVRVN 57 M + AI+L YGE +I+++ T+ +GR V + + + Q ++ + Sbjct: 1 MLTKTQAIVLHAIKYGETRLIVDMFTKVFGRQAFIVSIPKTPRGKVKKQFFQPLTILEIE 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKL-LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R Q L + L + A + L L+ L + LY+ L Sbjct: 61 TDIRPRQQLQKLHDVRLAAPFASIPFEPDKLAISLFVAEFLYYALRSEQRNELLYEYLEN 120 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 + S + L L + +GF +L Sbjct: 121 SIVWLDGQQSSFANFHLVFLLRLTRFLGFYPNLDDYKDGDYFD 163 >gi|297172258|gb|ADI23236.1| recombinational DNA repair protein (recF pathway) [uncultured nuHF2 cluster bacterium HF0770_13K08] Length = 263 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 58/156 (37%), Gaps = 3/156 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI--LQAGNLVRVNWRS 60 + D I+L + EK+ IL +T + G+ G + G+S R + L + Sbjct: 4 IETDGIVLKTMDFKEKDCILTFLTAKVGKKAGILHGGKSLRSGNAAKAELFVLNHFEFSE 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +L R L+ + + + L + E +D+L ++ Sbjct: 64 KPNMDLVRIRKCELQESFPLVRKNYSKFLHASYFSELLLQCEIPELDSHEYFDLLKNAMS 123 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 +I + E++LLK +G +L C G Sbjct: 124 LLSESQTDTEIKLNFEILLLKLLGITPNLEICFQCG 159 >gi|161353755|ref|YP_480379.2| DNA repair protein RecO [Frankia sp. CcI3] gi|119361459|sp|Q2JDJ2|RECO_FRASC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 243 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 66/178 (37%), Gaps = 6/178 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+ ++L E + I+ V+TR+ GR + + S R L+ G V + S Sbjct: 4 YRDEGVVLRTAPLAEADRIITVLTRRTGRVRAVAKGVRKTSSRFGSRLEPGTYVDLLLHS 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 A + + +++ + A + ++ L E L L + Sbjct: 64 GRALDT-VTQADIISPYGATIAVDYPRYTAAAVMLETAERLTSEERQPALRLFLLLVGGL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + ++ LL+ + G+G+ L C G L +S GG VC Sbjct: 123 RTLAGDERPPALVLDAFLLRALAVSGYGMALDHCARCGGPGLHLSLSVPGGGVVCPQC 180 >gi|86566841|gb|ABD10650.1| DNA replication and repair protein RecO [Frankia sp. CcI3] Length = 289 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 66/178 (37%), Gaps = 6/178 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+ ++L E + I+ V+TR+ GR + + S R L+ G V + S Sbjct: 50 YRDEGVVLRTAPLAEADRIITVLTRRTGRVRAVAKGVRKTSSRFGSRLEPGTYVDLLLHS 109 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 A + + +++ + A + ++ L E L L + Sbjct: 110 GRALDT-VTQADIISPYGATIAVDYPRYTAAAVMLETAERLTSEERQPALRLFLLLVGGL 168 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + ++ LL+ + G+G+ L C G L +S GG VC Sbjct: 169 RTLAGDERPPALVLDAFLLRALAVSGYGMALDHCARCGGPGLHLSLSVPGGGVVCPQC 226 >gi|288801614|ref|ZP_06407056.1| DNA repair protein RecO [Prevotella melaninogenica D18] gi|288335656|gb|EFC74089.1| DNA repair protein RecO [Prevotella melaninogenica D18] Length = 241 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 51/156 (32%), Gaps = 5/156 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRN---GQSHRMQPILQAGNLVRVN 57 M + AI+L +G+ ++I+++ T GR R + + Q L+ + Sbjct: 1 MILKSKAIVLRSLKFGDSSLIIDMFTELEGRISFITRIPKTAKGKIKKQYFQPLTLLDLE 60 Query: 58 WRSRLAQNLGEFRFEVL-ESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R +L + + + + L L+ + LY+ + Sbjct: 61 FDYRPRTSLQRIKEVRILRPYGSIPFDPVKSAILLFLSEFLYYVTRGEQQNAHLYNYVCA 120 Query: 117 FLNCHKI-PSVIGKIFVQIELMLLKNIGFGLDLTKC 151 + + + L + IGF +L Sbjct: 121 SMEWLDEAERDYANFHLVFMMRLSRFIGFFPNLDAY 156 >gi|258593726|emb|CBE70067.1| putative DNA repair protein recO (Recombination protein O) [NC10 bacterium 'Dutch sediment'] Length = 249 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 60/157 (38%), Gaps = 4/157 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR 61 +AI++G + GE + I+ TR+ G+ R + R + L+ L ++ + Sbjct: 5 TTEAIVIGGHNLGEADRIIPFFTRKLGKVRAVARGARRVRSRYGGTLELFTLGQLVFFES 64 Query: 62 LAQNLGEFRFEVL-ESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + L + + E G + + + EP E++ + Sbjct: 65 PNRTLHKINEFSVMEPFAGLKADLGRLGRGAYLVELAGASVEDEEPNEEIFLL-LRDALT 123 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + ++ E+ LL+ +G+ L+L +C+V Sbjct: 124 LLVLYDDPRLVRSFEIRLLRIVGYLLELYRCLVCRSV 160 >gi|256419508|ref|YP_003120161.1| DNA repair protein RecO [Chitinophaga pinensis DSM 2588] gi|256034416|gb|ACU57960.1| DNA repair protein RecO [Chitinophaga pinensis DSM 2588] Length = 243 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 34/236 (14%), Positives = 78/236 (33%), Gaps = 9/236 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L YG+ + I+ + T +G V +S + + Q GN++ + Sbjct: 1 MLHKTRGIVLRTVKYGDTSAIVNIFTELFGVQSYMVNGVRSSKPKAKGNLFQPGNILEMV 60 Query: 58 WRSRLAQNLGEFRFEVL-ESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + + L + + + L I L + L E E ++LY Sbjct: 61 VYHYEQKTIQRISEFKLGYIYTSLHFNIVKNTVALYMIELLQKSLREPEQQVDLYYFAEQ 120 Query: 117 FLNCHKIPS--VIGKIFVQIELMLLKNIGFGLD--LTKCVVT-GVTQDLLWVSPKSGGAV 171 L + + I + L L +++GF L+ ++ + + P Sbjct: 121 ALQALDMAPLGIAANIPLYFTLKLAEHLGFRLNGRYSEYAHYLDLQEGSFTDLPPHHSNY 180 Query: 172 CRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHL 227 + +++ S+ +E ++ D + F + ++ Sbjct: 181 LDAANSEITDRLFQCKSWEALDEINMNKDKRRKLLYAYLDFFRLHLPDFQELNSPP 236 >gi|330718561|ref|ZP_08313161.1| DNA repair protein RecO [Leuconostoc fallax KCTC 3537] Length = 263 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 51/181 (28%), Gaps = 4/181 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS----R 61 I+L R Y + ++++ V+T G R + + + + + Sbjct: 5 HGIVLYTRQYKDNDLLVRVLTETEGLRTFLARGAKKQKSKLSAGVQTYTLSLFEGALPKQ 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + + + Y L + EP Y I L+ Sbjct: 65 NGSLGYINDVQDTKQYTRLIKDIEANAYVAVIASLLDAAFEDGEPITHWYQQFVIALDKI 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 + I E+ LL +G + + G + S K G + + Sbjct: 125 NNGADPQIITNIFEVQLLVPLGVAPNWRADPIDGNQVGIFDYSEKYNGIISENHFGLDEH 184 Query: 182 K 182 + Sbjct: 185 R 185 >gi|15827261|ref|NP_301524.1| DNA repair protein RecO [Mycobacterium leprae TN] gi|221229739|ref|YP_002503155.1| DNA repair protein RecO [Mycobacterium leprae Br4923] gi|20139698|sp|Q9CCN0|RECO_MYCLE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254764647|sp|B8ZUT3|RECO_MYCLB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|13092810|emb|CAC30141.1| conserved hypothetical protein [Mycobacterium leprae] gi|219932846|emb|CAR70726.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length = 268 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 57/181 (31%), Gaps = 7/181 (3%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN 57 M ++D A++L + GE + I+ ++TR +G + + + L+ + Sbjct: 1 MRLYRDWALVLRQHNLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAYIDAQ 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + +++ ++S +++ L E Sbjct: 61 LHP-GRNLDIVTQVVSIDAFATDIVSDYGRYTCGCAMLETAERLAGEERAPAPTLHRLTV 119 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + + ++ LL+ + G+ LT C +GG+VC Sbjct: 120 SALRAVADGNRPRDLLLDAYLLRAMGIAGWAPALTACARCATPGPHRAFHIAAGGSVCVH 179 Query: 175 V 175 Sbjct: 180 C 180 >gi|466972|gb|AAA17158.1| B1937_F1_25 [Mycobacterium leprae] Length = 269 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 57/181 (31%), Gaps = 7/181 (3%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN 57 M ++D A++L + GE + I+ ++TR +G + + + L+ + Sbjct: 2 MRLYRDWALVLRQHNLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAYIDAQ 61 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + +++ ++S +++ L E Sbjct: 62 LHP-GRNLDIVTQVVSIDAFATDIVSDYGRYTCGCAMLETAERLAGEERAPAPTLHRLTV 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + + ++ LL+ + G+ LT C +GG+VC Sbjct: 121 SALRAVADGNRPRDLLLDAYLLRAMGIAGWAPALTACARCATPGPHRAFHIAAGGSVCVH 180 Query: 175 V 175 Sbjct: 181 C 181 >gi|595944|gb|AAA56763.1| RecO [Haemophilus influenzae] Length = 99 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 11/59 (18%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRL 62 +L R Y E ++++++ T + GR + ++ R + +LQ + + W + Sbjct: 7 RGFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKRSSWKSVLQPFTPLLLRWTGKS 65 >gi|311104759|ref|YP_003977612.1| DNA repair protein RecO [Achromobacter xylosoxidans A8] gi|310759448|gb|ADP14897.1| DNA repair protein RecO [Achromobacter xylosoxidans A8] Length = 195 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 52/144 (36%), Gaps = 6/144 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 +L ++ E ++I++ +R +G + + +P+L A + ++W Sbjct: 12 PGYMLHATAWRETSLIVQTFSRDHGCVAMVAKGAKRPYSVLRPVLSAFQPLLLSWTGNGE 71 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 E + L+ + + L R LP + LYD + L Sbjct: 72 VKT----LTRAEIAGIRPLTGTALMSAWYLNELLLRLLPREDAHPLLYDAYDFALQQLSG 127 Query: 124 PSVIGKIFVQIELMLLKNIGFGLD 147 + + E LL+ G+G+D Sbjct: 128 GTRAAGALRRFEWTLLRETGYGVD 151 >gi|88802003|ref|ZP_01117531.1| DNA repair protein [Polaribacter irgensii 23-P] gi|88782661|gb|EAR13838.1| DNA repair protein [Polaribacter irgensii 23-P] Length = 240 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 29/220 (13%), Positives = 68/220 (30%), Gaps = 5/220 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP----ILQAGNLVRVNW 58 AI+L Y + ++I++ T + G ++ + Q + + Sbjct: 4 ITTKAIVLNSLKYSDTSLIVKCYTAEEGLKAYIIKGVLKAKKGGIKAAYFQPLTQLNLVA 63 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIF 117 +L + + + + + + I + + E E + Y+ L Sbjct: 64 NHSTKSSLHTLKEVQILNPYKTIFRDIVKQSVVLFISEVLSNSIQEEEKNTDFYNYLEAA 123 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L I + L + +GF D+++ +G S +G S Sbjct: 124 LIWLDAHDKISNFHLLFLLNASRFLGFYPDISEIERSGFDLLNGSFSEATGNRNIISGNE 183 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYA 217 + K L+ +F E + + Q+ + + Sbjct: 184 LFQFKKLLGINFDTIENASFSKKERQLVLQIIIRYFELHL 223 >gi|86131238|ref|ZP_01049837.1| recombination protein O [Dokdonia donghaensis MED134] gi|85818649|gb|EAQ39809.1| recombination protein O [Dokdonia donghaensis MED134] Length = 239 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 70/234 (29%), Gaps = 10/234 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ----PILQAGNLVRV 56 M + +AI+ YGE ++I++ T+ G +RN + + Q + + Sbjct: 1 MLVKTEAIVFSALKYGEADLIVKAFTKSSGVKSYLLRNILKSKKGKLRVAMFQPLTHLEI 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLN 115 + L R + +H L + + I + R + E E L++ L Sbjct: 61 EANHKDKGTLESIREAKVITHYTSLHTQVAKSAIVFFISDMLRSSVQEEEENAPLFEFLV 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + S I + + L +GF D L S + Sbjct: 121 ASSLWLDLHSDIANFHLLFLVKLSGYLGFYPD-DSEAHHIYFNLLDGYFESSERTLYSRS 179 Query: 176 GLPYA-EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL 228 G K + +F + ++ S + L Y L Sbjct: 180 GEEIELLKRFLGINFDALTQIKLNQKQRTSFLNI---LLQYYELHLQGFKKPRS 230 >gi|225377162|ref|ZP_03754383.1| hypothetical protein ROSEINA2194_02808 [Roseburia inulinivorans DSM 16841] gi|225211067|gb|EEG93421.1| hypothetical protein ROSEINA2194_02808 [Roseburia inulinivorans DSM 16841] Length = 260 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 61/179 (34%), Gaps = 2/179 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++L G+ + + ++TR+ G+ F R + Q + + ++ Sbjct: 8 TGMVLNAMPIGDYDKRITLLTRERGKITAFARGARKPNSQFLAATNPFSFGEFELFEGRS 67 Query: 66 LGEFRFEVLESHCAKLLSSS-LFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 ++++ +L + YG + + E E+ +L L + P Sbjct: 68 TYTVAKVSIQNYFRELAADFNAAYYGFYFLEFADYYCQENNDETEMLKLLYQTLRALESP 127 Query: 125 SVIGKI-FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + ++ EL L G ++ C G + L W S K+ +C K Sbjct: 128 AFSNRLVRCIYELRTLTINGEAPNVFGCTKCGKKEALHWFSGKTARMLCDHCVNELRRK 186 >gi|297569283|ref|YP_003690627.1| DNA repair protein RecO [Desulfurivibrio alkaliphilus AHT2] gi|296925198|gb|ADH86008.1| DNA repair protein RecO [Desulfurivibrio alkaliphilus AHT2] Length = 269 Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 77/216 (35%), Gaps = 15/216 (6%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR---S 60 A+IL VRS+GE + I+ R+ G+ G + Q R++ + + + Sbjct: 5 HTRAVILAVRSHGEADKIVTFCGRETGKRNGIAKGAQRSRIRFVNKLELFSLLELSYEEG 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R + + + E+LE A + L +L E +P +L+ +L L Sbjct: 65 RSSGLVRIDQAELLEPFAAIRGDYLKYAAASLVGELLQAWLEEADPDPQLFSLLLWVLQT 124 Query: 121 H--------KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT----QDLLWVSPKSG 168 I V EL LL +G+ L C T + S G Sbjct: 125 IAGDATKDRNPSRNIMAAVVFFELKLLDLLGYRPGLEACRQCHGTALPAGESYHFSLAGG 184 Query: 169 GAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKS 204 G +C + A + +LP L + A L + Sbjct: 185 GLICPACNRQRASRHNLLPLSLATAKILAKAQELAN 220 >gi|226307200|ref|YP_002767160.1| DNA repair protein RecO [Rhodococcus erythropolis PR4] gi|259563682|sp|C1A1D6|RECO_RHOE4 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226186317|dbj|BAH34421.1| DNA repair protein RecO [Rhodococcus erythropolis PR4] Length = 271 Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 57/181 (31%), Gaps = 7/181 (3%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVN 57 M ++D A++L + GE + I+ ++TRQ+G + + + L+ + V Sbjct: 1 MRLYRDTAVVLRLHKLGEADHIVTLLTRQFGLVRAVAKGVRRTTSKFGARLEPFAHIDVQ 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLE---LYDML 114 + + +++ ++ +++ L E + Sbjct: 61 LLP-GKNLDIITQVQTVDAFATDIVDDYSRYTTACAVLETAERLAGEERAPAPQLQRLTV 119 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + + + L + G+ L +C +GGAVC Sbjct: 120 GALRAIAEQARPVEFVLDAFLLRAMGYAGWAPALEECARCSAPGPHRAFHVAAGGAVCTY 179 Query: 175 V 175 Sbjct: 180 C 180 >gi|297559706|ref|YP_003678680.1| DNA repair protein RecO [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296844154|gb|ADH66174.1| DNA repair protein RecO [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 243 Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 28/203 (13%), Positives = 68/203 (33%), Gaps = 6/203 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D+ ++L + GE + I+ ++TR+ G + + R + L+ V + + Sbjct: 4 YRDEGVVLRNQKLGEADRIITLLTRRTGLVRAVGKGVRRTRSRFGARLEPCTHVDLQLHA 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 ++ V A + S + + + + + L L + Sbjct: 64 GRTLDVITQAETVRAYGEAVVSDYSRYTAATAMLETAEKVVSVEK-DPALRQFLLLIGAL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + ++ LL+++ G+ L +C G + + +GG VC Sbjct: 123 RTLGEGSHDSRLVLDAYLLRSLAVAGYAPSLAECARCGSRGEHRAFAVHAGGMVCTVCRP 182 Query: 178 PYAEKMLVLPSFLWKEEQTIDAD 200 + L D + Sbjct: 183 HGSVHPSPDTLRLMSALLGGDWE 205 >gi|255659364|ref|ZP_05404773.1| DNA repair protein RecO [Mitsuokella multacida DSM 20544] gi|260848448|gb|EEX68455.1| DNA repair protein RecO [Mitsuokella multacida DSM 20544] Length = 246 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 67/201 (33%), Gaps = 5/201 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 +Q +A++LG +++G+ + ++ T++ G + R +Q + + + Sbjct: 4 YQTEAVVLGSKNWGDADKMMTFFTKERGLVRAAAFGCRRPRSPLAGGMQMFSYLDLQLSE 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + + YG L FLPE +P ++ L L+ Sbjct: 64 GRRVDTVRQCLLR-RHYRKLSEDLTAMAYGSFVAEFLREFLPEGQPEPRMFAALLDILDA 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLWVSPKSGGAVCRSVGLPY 179 + + + L++ G L CV G + S GG +CR P Sbjct: 123 FERRNPRVTAVAAV-YQLMEFTGLQLRYENCVHCGRKIEGDAAFSMHEGGVLCRDCATPD 181 Query: 180 AEKMLVLPSFLWKEEQTIDAD 200 A+ + D Sbjct: 182 AKAFPEELRHFIVGLRDFDWQ 202 >gi|325662227|ref|ZP_08150842.1| DNA repair protein RecO [Lachnospiraceae bacterium 4_1_37FAA] gi|331086021|ref|ZP_08335104.1| DNA repair protein RecO [Lachnospiraceae bacterium 9_1_43BFAA] gi|325471479|gb|EGC74700.1| DNA repair protein RecO [Lachnospiraceae bacterium 4_1_37FAA] gi|330406944|gb|EGG86449.1| DNA repair protein RecO [Lachnospiraceae bacterium 9_1_43BFAA] Length = 248 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 2/184 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 +IL G+ + + ++T++ G+ F R + + ++ Sbjct: 8 TGMILSAAPVGDYDKRVVILTKERGKISAFARGARRPNSSLVGVTTPFAFGEMTLYEGKS 67 Query: 66 LGEFRFEVLESHCAKLLSSSL-FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH-KI 123 + ++ ++L + YG + + E E+ +L L + Sbjct: 68 SYNLVQADISNYFSELRTDMEGAYYGFYFMEFADYYTKENNDEREMLKLLYQSLRALVRK 127 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I EL + G ++ CV G T++L S G +C + Sbjct: 128 TIPYELIRYIFELKSISINGEAPEVFACVSCGSTEELEVFSESGQGMLCSECCHEVKDGK 187 Query: 184 LVLP 187 + P Sbjct: 188 RLHP 191 >gi|167035365|ref|YP_001670596.1| DNA repair protein RecO [Pseudomonas putida GB-1] gi|189039661|sp|B0KV25|RECO_PSEPG RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166861853|gb|ABZ00261.1| DNA repair protein RecO [Pseudomonas putida GB-1] Length = 227 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 74/231 (32%), Gaps = 12/231 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R+Y E + +++ T GR +R +S + +++ + V R R Sbjct: 8 PAYVLHSRAYKETSALVDFFTP-QGRVRAVLRRARS-KGGSLVRPFVPLEVELRGRGELK 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + A L GL L R LP P L++ + L Sbjct: 66 N---VGGMDSAGTAAWLHGDALFSGLYLNELLMRLLPAEAPFPTLFEHYTLTLQALGAGR 122 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + + E LL +G+ L + V + A V L Sbjct: 123 PLEPLLRSFEWRLLDELGYAFSLQQDVNDQPVAADGLYRLR-VDAGLERVELAQPGLFRG 181 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHL-LRENFLGK 235 E +L +A + L + AL ++ L RE F + Sbjct: 182 TELLALAEANWEAPGALLAAKR-----LMRQALAVHLGAKPLVSRELFRKR 227 >gi|329946922|ref|ZP_08294334.1| DNA repair protein RecO [Actinomyces sp. oral taxon 170 str. F0386] gi|328526733|gb|EGF53746.1| DNA repair protein RecO [Actinomyces sp. oral taxon 170 str. F0386] Length = 249 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 66/205 (32%), Gaps = 8/205 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D+AI+L GE + I+ ++TR +G+ + + S R L+ ++V V + Sbjct: 6 YRDEAIVLRTYKLGEADRIIVMLTRHHGQVRAVAKGVRRTSSRFGARLEPFSMVDVQLHA 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR------FLPEREPCLELYDML 114 ++ + A ++F + R L + + Sbjct: 66 GRNLDVVTQAEIIDPFGRAVCADYAMFTCASTMVETAERLSADNGDLGTEASPQQYLLLA 125 Query: 115 NIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 G I L L G+ C + G + GGAVC S Sbjct: 126 GALAAMAHRRHAPGLILDSYLLRALALGGWAPSCYDCALCGAPGPHRAFHVQVGGAVCES 185 Query: 175 VGLPYAEKMLVLPSFLWKEEQTIDA 199 A ++ + L + D Sbjct: 186 CRSAGAVEVEPVTMVLLGALLSGDW 210 >gi|306818296|ref|ZP_07452025.1| recombination protein O [Mobiluncus mulieris ATCC 35239] gi|304648941|gb|EFM46237.1| recombination protein O [Mobiluncus mulieris ATCC 35239] Length = 243 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 58/177 (32%), Gaps = 4/177 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSR 61 +D+AI+L + GE + I+ +++ G + R+ L+ +V V R Sbjct: 5 RDEAIVLRTQDLGEADRIVTLLSANNGLVRAVAHGVRKTTSRIGARLEPFGVVDVLIRPG 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLNIFLNC 120 + E L + + + +V L E Y + L+ Sbjct: 65 RGGLHNVEQVETLAPYGRSIAADYALFTTANLMVETLERLSEEAWATDRYYRLTLGALHA 124 Query: 121 HKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + L LL G+ C G + +P +GGAVC Sbjct: 125 LALSRHEPGLVLDSYLLRLLGLAGWAASCWNCATCGAGGPHRYFNPAAGGAVCGECK 181 >gi|290769993|gb|ADD61760.1| putative protein [uncultured organism] Length = 247 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 28/178 (15%), Positives = 56/178 (31%), Gaps = 2/178 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SRLAQ 64 +IL GE + L ++T++YG+ F + + I + + + R Sbjct: 8 TGMILSAMPVGEYDRRLVILTKEYGKITVFAKGARKPNSALIGVTRSFIFGTFEVYRGRD 67 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI- 123 + ++ E + + Y + E E+ ++L I L Sbjct: 68 SYTMYKASAKEYFENVVNDLNAVCYACYFAEIADYYGRENLDASEMINLLYITLKALGRG 127 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I E+ ++ G D C G +L S G C++ + Sbjct: 128 AVSHELIRFIYEIRMIAVNGECPDFFTCHECGREDNLYVYSYSRNGLCCKNCATNVYD 185 >gi|269976425|ref|ZP_06183410.1| DNA repair protein RecO [Mobiluncus mulieris 28-1] gi|307701456|ref|ZP_07638475.1| DNA repair protein RecO [Mobiluncus mulieris FB024-16] gi|269935226|gb|EEZ91775.1| DNA repair protein RecO [Mobiluncus mulieris 28-1] gi|307613366|gb|EFN92616.1| DNA repair protein RecO [Mobiluncus mulieris FB024-16] Length = 259 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 58/177 (32%), Gaps = 4/177 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSR 61 +D+AI+L + GE + I+ +++ G + R+ L+ +V V R Sbjct: 21 RDEAIVLRTQDLGEADRIVTLLSANNGLVRAVAHGVRKTTSRIGARLEPFGVVDVLIRPG 80 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLNIFLNC 120 + E L + + + +V L E Y + L+ Sbjct: 81 RGGLHNVEQVETLAPYGRSIAADYALFTTANLMVETLERLSEEAWATDRYYRLTLGALHA 140 Query: 121 HKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + L LL G+ C G + +P +GGAVC Sbjct: 141 LALSRHEPGLVLDSYLLRLLGLAGWAASCWNCATCGAGGPHRYFNPAAGGAVCGECK 197 >gi|227874977|ref|ZP_03993126.1| DNA repair protein RecO [Mobiluncus mulieris ATCC 35243] gi|227844426|gb|EEJ54586.1| DNA repair protein RecO [Mobiluncus mulieris ATCC 35243] Length = 243 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 58/177 (32%), Gaps = 4/177 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSR 61 +D+AI+L + GE + I+ +++ G + R+ L+ +V V R Sbjct: 5 RDEAIVLRTQDLGEADRIVTLLSANNGLVRAVAHGVRKTTSRIGARLEPFGVVDVLIRPG 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLNIFLNC 120 + E L + + + +V L E Y + L+ Sbjct: 65 RGGLHNVEQVETLAPYGRSIAADYALFTTANLMVETLERLSEEAWATDRYYRLTLGALHA 124 Query: 121 HKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + L LL G+ C G + +P +GGAVC Sbjct: 125 LALSRHEPGLVLDSYLLRLLGLAGWAASCWNCATCGAGGPHRYFNPAAGGAVCGECK 181 >gi|256851186|ref|ZP_05556575.1| DNA repair protein RecO [Lactobacillus jensenii 27-2-CHN] gi|260660610|ref|ZP_05861525.1| DNA repair protein RecO [Lactobacillus jensenii 115-3-CHN] gi|282934652|ref|ZP_06339895.1| DNA repair protein RecO [Lactobacillus jensenii 208-1] gi|297206051|ref|ZP_06923446.1| recombination protein O [Lactobacillus jensenii JV-V16] gi|256616248|gb|EEU21436.1| DNA repair protein RecO [Lactobacillus jensenii 27-2-CHN] gi|260548332|gb|EEX24307.1| DNA repair protein RecO [Lactobacillus jensenii 115-3-CHN] gi|281301227|gb|EFA93528.1| DNA repair protein RecO [Lactobacillus jensenii 208-1] gi|297149177|gb|EFH29475.1| recombination protein O [Lactobacillus jensenii JV-V16] Length = 251 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 59/184 (32%), Gaps = 2/184 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR--SRLA 63 I+ + Y E +++ +++++ G VR + + N++ + Sbjct: 9 TGIVFKRQRYKEADVLAKIISKDMGIFTMLVRGALRPKSKLSASVLAFSYGNYQVLTSQK 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ ++ +L Y + E + E Y+++ + L Sbjct: 69 GLSPLKTYKDIKQFSNLYSDLTLNSYACYLCDLVDHAFVEYQSLGEFYNLILVALTKLNA 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I +EL +L G +C + G S +GG +C+ A Sbjct: 129 GQDPEIICQLVELQMLAAYGVRPQFKQCAICGEIHGPFDYSISAGGVICQKHFNEVARMH 188 Query: 184 LVLP 187 L Sbjct: 189 LDAK 192 >gi|115376813|ref|ZP_01464037.1| DNA repair protein RecO [Stigmatella aurantiaca DW4/3-1] gi|115366175|gb|EAU65186.1| DNA repair protein RecO [Stigmatella aurantiaca DW4/3-1] Length = 223 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 55/159 (34%), Gaps = 3/159 (1%) Query: 21 ILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLAQNLGEFRFEVLESHC 78 ++ ++TRQ+G+ F + + + L+ +RV+ + ++L + Sbjct: 1 MVTLLTRQHGKLTAFAAGARKSKRRFAGALEPFMYLRVHLVETRGSTVRLDSTDILAGYY 60 Query: 79 AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELML 138 A L L ++ + EP EL+ +L +L + EL Sbjct: 61 AARQELPLIARALYAVEMCRELTRDHEPHPELFALLEEYLVRLNAKEAGPTSLLAFELSA 120 Query: 139 LKNIGFGLDLTKCVVTGVTQDLL-WVSPKSGGAVCRSVG 176 L + G C + G GGAVC G Sbjct: 121 LAHAGLMPRFDACALCGGEPGERPRFDQAHGGAVCEPCG 159 >gi|172039459|ref|YP_001805960.1| DNA repair protein RecO [Cyanothece sp. ATCC 51142] gi|171700913|gb|ACB53894.1| putative recombination protein O [Cyanothece sp. ATCC 51142] Length = 282 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 67/217 (30%), Gaps = 12/217 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN-WRSR 61 +Q I+L + E + ++ +++ +YG V + + + + V ++ Sbjct: 9 YQTTGIVLKGMPFQEADRLVTLLSPEYGLIRAIVPGARKQKSKLRGRCELFVINELLIAK 68 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + E LES+ + +P LELY++LN L Sbjct: 69 GRSLDKITQAETLESYPGLSKDLGKLAAAQYLAELALNLALDDQPQLELYELLNEHLRRL 128 Query: 122 KIPSVIGKIFVQIE---LMLLKNIGFGLDLTKCVVTG-----VTQDLLWVSPKSGGA--- 170 + SV ++ + LL G G + C +T D W S A Sbjct: 129 EKMSVAESLYGYLAQAVFHLLAIAGIGPQVHCCCLTQEELTPNFNDPNWCVGFSFDAGGL 188 Query: 171 VCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQ 207 + + + + + +L Sbjct: 189 INLEIKDRGKNNSHSVVLPIINHKLKASELTLLQHLN 225 >gi|148360407|ref|YP_001251614.1| DNA repair protein RecO [Legionella pneumophila str. Corby] gi|296106526|ref|YP_003618226.1| DNA repair protein RecO (recombination protein O) [Legionella pneumophila 2300/99 Alcoy] gi|254764638|sp|A5IFW8|RECO_LEGPC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|148282180|gb|ABQ56268.1| DNA repair protein RecO [Legionella pneumophila str. Corby] gi|295648427|gb|ADG24274.1| DNA repair protein RecO (recombination protein O) [Legionella pneumophila 2300/99 Alcoy] Length = 229 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 67/206 (32%), Gaps = 10/206 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A ++ + G+ + L++ TR+ G + G++ + Q +LQA + W S + Sbjct: 8 AWVIHKQWSGDTSARLKLFTREMGLINCLCKGGRTPKKQSLLQAFIPL---WVSIEERYD 64 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 + + + L GL L+ L P +L+D LN + Sbjct: 65 QYYTRNIESTSSRLDLEGHSLFSGLYINELLYYTLSPDFPDPDLFDAYLFTLNGIALARE 124 Query: 127 IGKIF---VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I + E LLK G+ TG L V V + +K Sbjct: 125 REVIEALLRRFEWALLKACGYTFSFLHEARTG----ELIVPDSYYQFVAGEGFILGGDKK 180 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLT 209 + L + + + + Sbjct: 181 IPGEHLLAIAADNLSESAYLKSAKFI 206 >gi|94986745|ref|YP_594678.1| hypothetical protein LI0301 [Lawsonia intracellularis PHE/MN1-00] gi|254764637|sp|Q1MRL9|RECO_LAWIP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|94730994|emb|CAJ54357.1| hypothetical protein LI0301 [Lawsonia intracellularis PHE/MN1-00] Length = 249 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 65/183 (35%), Gaps = 4/183 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR- 59 M W D+AIIL + S+ E ++ ++++T Q+G F G R + G L + R Sbjct: 1 MEWLDNAIILELGSFRESDVWVKLLTSQHGVISAFAFGGHRSRRRFCGCLGILNEIQVRV 60 Query: 60 --SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 SR + L ++ + + F + I L + +Y ++ Sbjct: 61 QTSRNGRFLNLQEASLINGPIQLRTNKNRFGAFINCIRFLEVVGVSSDAAPPVYTLMKEL 120 Query: 118 LNCH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 K I + L + G+ + C G + S G + S+ Sbjct: 121 FYFFEKNTQPYEIIPILFRLRIASEQGYAPIFSNCAKCGRLINNKGFFGISDGIIVCSIC 180 Query: 177 LPY 179 + Y Sbjct: 181 INY 183 >gi|293376341|ref|ZP_06622578.1| DNA repair protein RecO [Turicibacter sanguinis PC909] gi|325843400|ref|ZP_08167958.1| DNA repair protein RecO [Turicibacter sp. HGF1] gi|292645030|gb|EFF63103.1| DNA repair protein RecO [Turicibacter sanguinis PC909] gi|325489322|gb|EGC91696.1| DNA repair protein RecO [Turicibacter sp. HGF1] Length = 247 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 68/194 (35%), Gaps = 5/194 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M D IIL +YGE + I++V+TR G FV+N + L + Sbjct: 1 MALDVDGIILKNFNYGEHHKIIKVLTRNMGVIGVFVQNANKVNTKKSALVQPLTSARFNL 60 Query: 61 R-----LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + ++ + EV + L Y I + + + E +Y +L Sbjct: 61 KPSTNANSELYYLYSGEVENHYLNIKLDYETVAYFYFMIELILKGVSSDEYSAYIYRLLK 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 FL+ + + + ++ +G L C T+ ++ + + GG VC Sbjct: 121 NFLDAADAGYNPYLLSLIFQFKMMPVLGIEPVLDCCANCRSTEQIVTIGIRQGGLVCAKC 180 Query: 176 GLPYAEKMLVLPSF 189 ++ P Sbjct: 181 YDNTQPILIDAPLI 194 >gi|297571539|ref|YP_003697313.1| DNA repair protein RecO [Arcanobacterium haemolyticum DSM 20595] gi|296931886|gb|ADH92694.1| DNA repair protein RecO [Arcanobacterium haemolyticum DSM 20595] Length = 243 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 68/178 (38%), Gaps = 6/178 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++DDAI+L GE + ++ +++R +G+ + + R ++ + V V Sbjct: 4 YRDDAIVLRTHDIGEADRVITMLSRNHGKIRAVAKGVRKTGSRFGARVEPFSHVDVQIYL 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREP--CLELYDMLNIFL 118 + + L + + + +IV + + + +L+ +L+ L Sbjct: 64 -GKTLDTISQVDTLSQYGRTIGRNYDAYTAASAIVEFADIINDSDSAADPQLFALLHGAL 122 Query: 119 NCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 ++ V L + G+G + +C GV ++ +GGAVC Sbjct: 123 YAVAQQVHPPELIVYSYILRSMMVAGWGFSIDECASCGVPGPHSALNIAAGGAVCDDC 180 >gi|119485167|ref|ZP_01619552.1| DNA repair protein RecO [Lyngbya sp. PCC 8106] gi|119457395|gb|EAW38520.1| DNA repair protein RecO [Lyngbya sp. PCC 8106] Length = 303 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 21/160 (13%), Positives = 47/160 (29%), Gaps = 10/160 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSR 61 + I L GE + +L ++T ++G + + R + +V + Sbjct: 5 YTATGINLKAIPLGESDRLLTILTPEHGLIRAVAPSARKPRSKLGGRSELFIVNQLLLYK 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + ++++S+ + + P EL+ +LN L+ Sbjct: 65 GRSLDRITQADLIKSYGGLSQNLGKLSASQYLAEVVLSVALSEHPQEELFLLLNEHLDRL 124 Query: 122 KIPSVIGKIFVQI---------ELMLLKNIGFGLDLTKCV 152 + +I LL G + C Sbjct: 125 EHLPNTPQIETITATIAYLTHGMFHLLAWSGISPQVQHCC 164 >gi|332665579|ref|YP_004448367.1| DNA repair protein recO [Haliscomenobacter hydrossis DSM 1100] gi|332334393|gb|AEE51494.1| DNA repair protein recO [Haliscomenobacter hydrossis DSM 1100] Length = 241 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 50/151 (33%), Gaps = 5/151 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVR-VNWR 59 M + I+ Y E ++I+++ T G FV +S + + ++ V+ Sbjct: 1 MLIETRGIVFRTVKYSESSLIVDIYTEAKGLQSYFVNGVRSQKSRQNASIFQVMTLVDLV 60 Query: 60 SRLAQNLGEFRFEVLES---HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + + ++ G R + ++S + A G + + E E L+ L Sbjct: 61 AGVREDRGLNRIKEIKSAFVYRAIPFDVRKSAVGTFITEVARKTIREAEAHPALFAFLYN 120 Query: 117 FLNCHKIPSVI-GKIFVQIELMLLKNIGFGL 146 + + + +GF Sbjct: 121 TFLFLDQTQYPVANAHLHFLVEMSGFLGFMP 151 >gi|113460242|ref|YP_718300.1| DNA repair protein RecO [Haemophilus somnus 129PT] gi|112822285|gb|ABI24374.1| DNA replication and repair protein RecO [Haemophilus somnus 129PT] Length = 202 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 61/206 (29%), Gaps = 10/206 (4%) Query: 35 FVRNGQSHRM--QPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQ 92 + ++ R + +LQ + +NW R + L ++ G Sbjct: 1 MAKGARAKRSAWKSLLQPFTPLLLNWSGRGELK---ILIKAEAISLTLPLQTTALYSGFY 57 Query: 93 SIVPLFRFLPEREPCLELYDMLNIFLNCHKI-PSVIGKIFVQIELMLLKNIGFGLDLTKC 151 + R L +L+ L P I K E LL+ +G+ +D C Sbjct: 58 VNELIARLLAPETAYPDLFQYYLQCLTALASSPQEIEKSLRTFEFQLLEVLGYAVDFCHC 117 Query: 152 VVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDY 211 +G D + + ++ + +D L++A + + Sbjct: 118 AGSGKPVDEKMTYRYREEKGFIASLIKDNLTFYGRELLAFERREFVDKTVLQAAKRFSRI 177 Query: 212 FLNKYALQHNIIHCHLLRENFLGKLL 237 L Y RE F +L Sbjct: 178 ALKYYL---GNKPL-KSRELFTQNIL 199 >gi|86143723|ref|ZP_01062099.1| DNA repair protein [Leeuwenhoekiella blandensis MED217] gi|85829766|gb|EAQ48228.1| DNA repair protein [Leeuwenhoekiella blandensis MED217] Length = 238 Score = 76.4 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 67/233 (28%), Gaps = 9/233 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ----PILQAGNLVRV 56 M AI++ YGE ++I+ T + G ++ + + Q + + + Sbjct: 1 MLVTTKAIVISAIKYGEADLIVRCFTEEAGLKSYILQRILKSKKGKLRTAMFQPASQLEL 60 Query: 57 NWRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + L R +V++ + + L L + E E LY L Sbjct: 61 VAVHKDKGTLESIREAKVIQPYVSLHTDVLKSSVVLFLSEMLRNAIQEEEENRALYAFLE 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + L L K +GF D ++ + P Sbjct: 121 HAFLWFDLHEQTANFHLLFLLELTKYLGFYPDTSELHQPHFNLETGIFEPVEHFYSISEE 180 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL 228 L K+L+ +F ++ + L Y L + Sbjct: 181 NLN-TLKLLLGINFDALFTIKLNQKRRADFINM---LLAYYELHLHGFKKPKS 229 >gi|295132042|ref|YP_003582718.1| DNA repair protein RecO [Zunongwangia profunda SM-A87] gi|294980057|gb|ADF50522.1| DNA repair protein RecO [Zunongwangia profunda SM-A87] Length = 239 Score = 76.4 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 61/222 (27%), Gaps = 5/222 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ----PILQAGNLVRV 56 M AI++ YGE ++I+ + + + G +R + Q + + Sbjct: 1 MIVNSKAIVISALKYGEADLIVNLYSLESGLRTYMLRGILKSKKGKFKVSQFQLLTQLEI 60 Query: 57 NWRSRLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + L +V+ ++ + + + L + E E LY L Sbjct: 61 VASHKNKGTLEYLKDAKVINTYTSLHTNMIKTSLVMFIAEVLKSAIREEEANPALYHFLE 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + + L L +GF D P C Sbjct: 121 TAFSWLDLHDKTANFHIMFLLKLSGFLGFQPDDLNTEQPFFNLLEGTFEPVKTNDYCVEG 180 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYA 217 + + +F + + + ++ + + Sbjct: 181 ENLDILRAFLNVNFNDMQRVKLSGEQRADFLRMLLQYYELHI 222 >gi|325856530|ref|ZP_08172219.1| DNA repair protein RecO [Prevotella denticola CRIS 18C-A] gi|327313064|ref|YP_004328501.1| DNA repair protein RecO [Prevotella denticola F0289] gi|325483499|gb|EGC86472.1| DNA repair protein RecO [Prevotella denticola CRIS 18C-A] gi|326945921|gb|AEA21806.1| DNA repair protein RecO [Prevotella denticola F0289] Length = 242 Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 54/156 (34%), Gaps = 5/156 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFV---RNGQSHRMQPILQAGNLVRVN 57 M + AI+L +G+ ++I++++T Q GR V + + + Q L+ + Sbjct: 1 MILKSKAIVLRSLKFGDASLIIDMLTEQEGRVSFIVHIPKTAKGKIKKQYFQPLTLLDLV 60 Query: 58 WRSRLAQNLGEFRFEVL-ESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R +L + + + + L L+ + LY+ + Sbjct: 61 FDYRQRVSLQRIKDVRILHPYGSIPFDPVKSAILLFLSEFLYHVTRGEQRNAGLYNYVKA 120 Query: 117 FLNCHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKC 151 + + + L + IGF +L Sbjct: 121 SVEWLDEAEQGYASFHLVFMMRLSRFIGFFPNLEAY 156 >gi|162449950|ref|YP_001612317.1| DNA repair protein RecO (recombination protein O) [Sorangium cellulosum 'So ce 56'] gi|161160532|emb|CAN91837.1| DNA repair protein RecO (recombination protein O) [Sorangium cellulosum 'So ce 56'] Length = 239 Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 44/225 (19%), Positives = 76/225 (33%), Gaps = 10/225 (4%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH-RMQPILQAGNLVRVNWRS 60 + A+++ +GE ++++ + T Q G R + + P L+ +L+RV Sbjct: 11 RLRTGALLVRRVPFGEADLLVGLFTEQGGLISATARGARRSAKRFPALEPMHLLRVTLEI 70 Query: 61 RLAQNLGEFRFEVLE-SHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R L + +E +++ + P + LN L+ Sbjct: 71 RPGAELAQLTEAAIERPRLRLAADLGRLEVAGRALRWVREIAPAHTAEQAAWSELNQLLD 130 Query: 120 CHKIPSVIGKIFVQIEL--MLLKNIGFGLDLTKCVVTGVTQDLLWV---SPKSGGAVCRS 174 S + E LL G+GL+LT+CV G D P GG VCR+ Sbjct: 131 RLDEVSTPPPQALLAETGLRLLVAFGWGLELTQCVRCGRACDTTQSACADPARGGLVCRA 190 Query: 175 VGLPYAEKMLVLPSFLW---KEEQTIDADSLKSAFQLTDYFLNKY 216 G L I + + A L + L + Sbjct: 191 CGGGPVVLRPEPRERLLAAMLGGAPIPEEDVPLALDLVEGALTAH 235 >gi|229493249|ref|ZP_04387041.1| DNA repair protein RecO [Rhodococcus erythropolis SK121] gi|229319980|gb|EEN85809.1| DNA repair protein RecO [Rhodococcus erythropolis SK121] Length = 327 Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 23/178 (12%), Positives = 56/178 (31%), Gaps = 6/178 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++D A++L + GE + I+ ++TRQ+G + + + L+ + V Sbjct: 60 YRDTAVVLRLHKLGEADHIVTLLTRQFGLVRAVAKGVRRTTSKFGARLEPFAHIDVQLLP 119 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLE---LYDMLNIF 117 + + +++ ++ +++ L E + Sbjct: 120 -GKNLDIITQVQTVDAFATDIVDDYSRYTTACAVLETAERLAGEERAPAPQLQRLTVGAL 178 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + + L + G+ L +C +GGAVC Sbjct: 179 RAIAEQARPVEFVLDAFLLRAMGYAGWAPALEECARCSAPGPHRAFHVAAGGAVCTYC 236 >gi|52841178|ref|YP_094977.1| DNA repair protein RecO [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|81603441|sp|Q5ZWZ0|RECO_LEGPH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|52628289|gb|AAU27030.1| DNA repair protein RecO [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 229 Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 67/206 (32%), Gaps = 10/206 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A ++ + G+ + L++ TR+ G + G++ + Q +LQA + W S + Sbjct: 8 AWVIHKQWSGDTSARLKLFTRELGLINCLCKGGRTPKKQSLLQAFIPL---WVSIEERYD 64 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 + + + L GL L+ L P +L+D LN + Sbjct: 65 QYYTRNIESTSSRLDLEGHSLFSGLYINELLYYTLSPDFPDPDLFDAYLFTLNGIALARE 124 Query: 127 IGKIF---VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I + E LLK G+ TG L V V + +K Sbjct: 125 REAIEALLRRFEWALLKACGYTFSFLHEARTG----ELIVPDSYYQFVAGEGFILGGDKE 180 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLT 209 + L + + + + Sbjct: 181 IPGEHLLAIAADNLSESAYLKSAKFI 206 >gi|229552354|ref|ZP_04441079.1| recombination protein O [Lactobacillus rhamnosus LMS2-1] gi|258539725|ref|YP_003174224.1| DNA repair protein recO [Lactobacillus rhamnosus Lc 705] gi|229314336|gb|EEN80309.1| recombination protein O [Lactobacillus rhamnosus LMS2-1] gi|257151401|emb|CAR90373.1| DNA repair protein recO [Lactobacillus rhamnosus Lc 705] Length = 271 Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 71/202 (35%), Gaps = 4/202 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS--RLA 63 + +++ ++Y E +++++++T Q+G+ + V + ++ R + Sbjct: 9 EGLVMSRQNYRESDMLVKILTDQFGKKMFLVNRARKPGFTLAAGILPFTHADYIGEVRDS 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + +L Y L P+ P + + L+ Sbjct: 69 GLSYLSAIKSPTQYRQISNDITLNAYAAYIFGLLDLAFPDERPVGFWFKQVKQALHLIDT 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I +E+ +LK G + CV+ G T L S GG +C+ ++ Sbjct: 129 GLDPQIIANVVEVQMLKAYGVEPNWRGCVIDGRTDLPLDFSESYGGLLCQQHWDKDPHRL 188 Query: 184 LVLPS--FLWKEEQTIDADSLK 203 P F + T+D +K Sbjct: 189 HASPRAIFYLRRFSTLDLSQVK 210 >gi|325963337|ref|YP_004241243.1| DNA replication and repair protein RecO [Arthrobacter phenanthrenivorans Sphe3] gi|323469424|gb|ADX73109.1| DNA replication and repair protein RecO [Arthrobacter phenanthrenivorans Sphe3] Length = 250 Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 59/184 (32%), Gaps = 8/184 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++DDA++L GE + I+ ++T+ +G+ + + S R L+ + + S Sbjct: 11 YRDDAVVLRTHKLGEADRIITLLTKHHGQVRAVAKGVRRTSSRFGARLEPFMVADLQLVS 70 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC-LELYDMLNIFLN 119 ++ + + + Y++L L Sbjct: 71 GKTLDIVTQAVAKGAYGGSIAADYGRYTVAAAMTETAEKLTDVDGEAGTAQYNLLVGALA 130 Query: 120 CHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + ++ LL+ + G+ T C G+ S GG VC Sbjct: 131 SLSRDEHAAGL--ILDSYLLRALATGGWAPSFTHCARCGMPGPHTAFSAALGGMVCGGCR 188 Query: 177 LPYA 180 P + Sbjct: 189 PPGS 192 >gi|54293918|ref|YP_126333.1| DNA repair protein recO [Legionella pneumophila str. Lens] gi|81601436|sp|Q5WXW5|RECO_LEGPL RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|53753750|emb|CAH15208.1| DNA repair protein recO [Legionella pneumophila str. Lens] Length = 229 Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 67/206 (32%), Gaps = 10/206 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A ++ + G+ + L++ TR+ G + G++ + Q +LQA + W S + Sbjct: 8 AWVIHKQWSGDTSARLKLFTRELGLINCLCKGGRTPKKQSLLQAFIPL---WVSIEERYD 64 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 + + + L GL L+ L P +L+D LN + Sbjct: 65 QYYTRNIESTSSRLDLEGHSLFSGLYINELLYYTLSPDFPDPDLFDAYLFTLNGIALARE 124 Query: 127 IGKIF---VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I + E LLK G+ TG L V V + +K Sbjct: 125 REAIEALLRRFEWALLKACGYTFSFLHEARTG----ELIVPDSYYQFVAGEGFILGGDKE 180 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLT 209 + L + + + + Sbjct: 181 IPGEHLLAIAADNLSEPAYLKSAKFI 206 >gi|332291949|ref|YP_004430558.1| DNA repair protein RecO [Krokinobacter diaphorus 4H-3-7-5] gi|332170035|gb|AEE19290.1| DNA repair protein RecO [Krokinobacter diaphorus 4H-3-7-5] Length = 239 Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 72/234 (30%), Gaps = 10/234 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ----PILQAGNLVRV 56 M + +AI+ YGE ++I++ T+ G +R + + Q + + Sbjct: 1 MLVKTEAIVFSALKYGEADLIVKAFTKSSGLKSYLIRGVLKSKKGKLRVAMFQPLTHLEI 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCL-ELYDMLN 115 + L R + +H L + + I + R + E L+D + Sbjct: 61 EANHKDKGTLESIREAKVVTHYTSLHTEVAKSAIVFFIADVLRSSVQEEEENVPLFDFIV 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + I + L L +GF D V + + + ++ Sbjct: 121 NASLWLDLNNTIANFHLLFLLKLSSYLGFYPD-DSEVQHEYFNLMDGMFENAETSIYCRS 179 Query: 176 GLPYA-EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL 228 G K+ + +F ++ S + L Y L + Sbjct: 180 GQDIELLKLFLGTNFDALVSIKLNQKQRTSFLNM---LLQYYELHLHGFKKPRS 230 >gi|270340241|ref|ZP_06007550.2| conserved hypothetical protein [Prevotella bergensis DSM 17361] gi|270332128|gb|EFA42914.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] Length = 240 Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 57/158 (36%), Gaps = 5/158 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFV---RNGQSHRMQPILQAGNLVRVN 57 M + A++L +G+ +I++++TR+ GR + G+ + Q L+ + Sbjct: 1 MEVKTRALVLHALKFGDSQMIVDLLTREQGRVSFICYIPKTGRGKVKKQFFQPLTLLNLV 60 Query: 58 WRSRLAQNLGEFRFEVL-ESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + + +L F + + + + + L L + LYD + Sbjct: 61 YTYKPNHSLQRFSEISISQPYGSLPFDAYKLSITLFISEFLTYATRGEQENTHLYDYIES 120 Query: 117 FLNCHKI-PSVIGKIFVQIELMLLKNIGFGLDLTKCVV 153 + + + L + IGF +L+ V Sbjct: 121 SMMWLDNVSRSFANFHLVFMMHLSRFIGFFPNLSDNVR 158 >gi|218248277|ref|YP_002373648.1| DNA repair protein RecO [Cyanothece sp. PCC 8801] gi|226737859|sp|B7K1F0|RECO_CYAP8 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|218168755|gb|ACK67492.1| DNA repair protein RecO [Cyanothece sp. PCC 8801] Length = 273 Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 57/159 (35%), Gaps = 4/159 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN-WRSR 61 ++ IIL GE + ++ +++ ++G V + + + ++ V + ++ Sbjct: 5 YKATGIILKGMPIGEADRLVTILSPEWGLIRAVVPGARKSKSRLRGRSELFVINDLLIAK 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + LES+ G + +P ELY++L L Sbjct: 65 GRSLDKITQADTLESYPKLSQELGKLASGQYLAELVLCLAVSEQPQGELYELLKEHLRRL 124 Query: 122 KIPSVIGKIFVQIE---LMLLKNIGFGLDLTKCVVTGVT 157 + S + + LL G G + +C +T T Sbjct: 125 EDISSGQSLHSHLAQAVFHLLAIAGIGPQVHRCCLTQET 163 >gi|119713401|gb|ABL97463.1| DNA repair protein RecO [uncultured marine bacterium HF130_81H07] Length = 238 Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 70/226 (30%), Gaps = 9/226 (3%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR 59 + AI+L ++ E ++I T +YG R +S + + I G + + + Sbjct: 5 RFSSKAILLHSANFRESSLIGTFFTDEYGLIKLVARGARSKKNKLSNIKVPGAIFEIEFG 64 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN---I 116 + + + ++ S L + R + P ++ L Sbjct: 65 GKGDLKNLYTCEIID----SIIIKESNLKIYLYLNEIIIRTIEPEAPVKSIFKSLISLYK 120 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + P+ + EL L+ +G+ LT ++ L Sbjct: 121 DIQLSESPTERELKLRKFELDLISELGYEFSLTLDSKGKKIKEDLIYEFIPSKGFQEVNK 180 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNI 222 + +L + E ++ S K + L+ + + Sbjct: 181 ESLKDVILGSSILKFNEGVFLNDQSKKFIKNIMKSSLDTISSKPLN 226 >gi|282859417|ref|ZP_06268523.1| DNA repair protein RecO [Prevotella bivia JCVIHMP010] gi|282587815|gb|EFB93014.1| DNA repair protein RecO [Prevotella bivia JCVIHMP010] Length = 241 Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 59/155 (38%), Gaps = 5/155 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + AI+L YG+ ++I++++T + GR VR ++ + + Q L+ + Sbjct: 1 MLQKTKAIVLHSLKYGDSSLIIDLLTEEEGRLTFIVRLPKTPKGKIKKQYFQPMTLLDIA 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNI 116 + R ++ + ++ + + L I L + LY + Sbjct: 61 FDFRPHASMQRIKDIRIDIPFTTIPFDPIKSSILLFISEFLLYITRSEQYNKALYQFVAK 120 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTK 150 + + F L L K IGF +L++ Sbjct: 121 SVEWLDTATDHLANFHLTFMLHLSKFIGFHPNLSE 155 >gi|225548174|ref|ZP_03769459.1| hypothetical protein RUMHYD_00153 [Blautia hydrogenotrophica DSM 10507] gi|225040613|gb|EEG50859.1| hypothetical protein RUMHYD_00153 [Blautia hydrogenotrophica DSM 10507] Length = 250 Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 2/184 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 +++ GE + L ++TR+ G+ F + + + A V ++ ++ Sbjct: 8 QGMVISAIPVGEYDKRLVLLTRERGKISAFAKGARRPNSPLLAAANPFVLGSFTLYEGRS 67 Query: 66 LGEFRFEVLESHCAKLLSSSL-FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN-CHKI 123 + +L +G + + E E ++L + L Sbjct: 68 SYTVNQAAPSHYFTELAQEQPGIYFGFYFLELADYYGREGVDAHETVNLLYVSLKALLNP 127 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + E LL G + +CV ++L + S G VC + ++ Sbjct: 128 KIPDELVRSIYEFRLLVIQGEYPQIFQCVSCSREEELTYFSQSLHGMVCHNCRQTASDLS 187 Query: 184 LVLP 187 V Sbjct: 188 YVDE 191 >gi|262375523|ref|ZP_06068756.1| DNA repair protein RecO [Acinetobacter lwoffii SH145] gi|262309777|gb|EEY90907.1| DNA repair protein RecO [Acinetobacter lwoffii SH145] Length = 236 Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 28/202 (13%), Positives = 57/202 (28%), Gaps = 17/202 (8%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y E++ I+ + T++YGR G +R + ++ Sbjct: 7 HGYLIHHRKYRERSHIVHLFTQEYGRVDGILRQ----------MPPPQYQPIRLQASGKS 56 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH---- 121 + ++ + F G L R P + + L Sbjct: 57 ELKNFTKLEIVNQPIFFFGDAFFSGFYLNEILLRLCPLEVEMPQTFAKYAETLTALQQLS 116 Query: 122 ---KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + +I Q E +LL+ +G+GLD + + S Sbjct: 117 AQSNPNLYLKQILRQFEHVLLEELGYGLDFSVDANQVQINPEQHYYFQLNAGFMPSAKTL 176 Query: 179 YAEKMLVLPSFLWKEEQTIDAD 200 + + E D + Sbjct: 177 RSTMSGQQILSMLTHENGGDFN 198 >gi|58337482|ref|YP_194067.1| DNA repair protein [Lactobacillus acidophilus NCFM] gi|227904118|ref|ZP_04021923.1| recombination protein O [Lactobacillus acidophilus ATCC 4796] gi|67460737|sp|Q5FJT8|RECO_LACAC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|58254799|gb|AAV43036.1| DNA repair protein [Lactobacillus acidophilus NCFM] gi|227868137|gb|EEJ75558.1| recombination protein O [Lactobacillus acidophilus ATCC 4796] Length = 250 Score = 76.0 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 28/185 (15%), Positives = 65/185 (35%), Gaps = 2/185 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 II + Y E +++ +++T+Q G V+ + + N + + + Sbjct: 9 QGIIFKRQKYKEADLLAKIITKQSGIITLIVKGAMRPKSKLSAATLNFSAGTYVIYTSGH 68 Query: 66 --LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ ++ A + Y + E +P + Y++ L Sbjct: 69 GLSNLRTYKKVQQFDALYRDLTKNAYVSFIFDLIDHAFVEYQPLGQYYNLAVFALEKISA 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I +++ +L G +L+ CV+ G + + S K GG +C ++ Sbjct: 129 GVDSEMITQIVQMKMLSAYGVKPELSHCVICGKEKGIFDYSIKLGGVICSDHFNVVESRL 188 Query: 184 LVLPS 188 + P Sbjct: 189 HLKPK 193 >gi|257060399|ref|YP_003138287.1| DNA repair protein RecO [Cyanothece sp. PCC 8802] gi|256590565|gb|ACV01452.1| DNA repair protein RecO [Cyanothece sp. PCC 8802] Length = 273 Score = 76.0 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 57/159 (35%), Gaps = 4/159 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN-WRSR 61 ++ IIL GE + ++ +++ ++G V + + + ++ V + ++ Sbjct: 5 YKATGIILKGMPIGEADRLVTILSPEWGLIRAVVPGARKSKSRLRGRSELFVINDLLIAK 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + LES+ G + +P ELY++L L Sbjct: 65 GRSLDKITQADTLESYPKLSQELGKLAAGQYLAELVLCLAVSEQPQGELYELLKEHLRRL 124 Query: 122 KIPSVIGKIFVQIE---LMLLKNIGFGLDLTKCVVTGVT 157 + S + + LL G G + +C +T T Sbjct: 125 EDISSGQSLHSHLAQAVFHLLAIAGIGPQVHRCCLTQET 163 >gi|229828495|ref|ZP_04454564.1| hypothetical protein GCWU000342_00557 [Shuttleworthia satelles DSM 14600] gi|229793089|gb|EEP29203.1| hypothetical protein GCWU000342_00557 [Shuttleworthia satelles DSM 14600] Length = 248 Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 23/172 (13%), Positives = 52/172 (30%), Gaps = 2/172 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++L GE + + ++TR+ G F R + R Q + G + + N Sbjct: 8 TGMVLSTMPIGEFDKRVVLLTRELGEISAFARGARRPRSQLLAATGPMAFGTFELYEGLN 67 Query: 66 LGEFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 +E++ ++ + + E + +L L Sbjct: 68 SYTLARASIEAYFLEIAEDYDKVCLAAYFLEMAEYYGIENSDESQRLLLLYQTLRALASD 127 Query: 125 SVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + + E+ + G D+ C G + L + +C Sbjct: 128 KFSPRLLRIIYEIRTMGINGEYPDVFSCAACGRKEGLAYFHMGRRAVICSDC 179 >gi|258647684|ref|ZP_05735153.1| DNA repair protein RecO [Prevotella tannerae ATCC 51259] gi|260852513|gb|EEX72382.1| DNA repair protein RecO [Prevotella tannerae ATCC 51259] Length = 240 Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 54/189 (28%), Gaps = 6/189 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L Y + I++V+TR+ G FVR + R Q V + Sbjct: 1 MLIKSRGIVLHTLKYNDAGCIVDVLTREEGFQSFFVRISRGKRGGLKSAFFQPLTAVDIE 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 W + NL R L L L L+D Sbjct: 61 WNHKPTSNLQTLRSVSPHPMLGL-ERPEKITLALFLAEFLRTALRSEPIAAPLFDYTWDS 119 Query: 118 LNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + F L + +GF +L G+ DL S + + Sbjct: 120 IEWLNLSEQHFSNFHLVFLLRMTHFLGFYPNLANYAD-GMYFDLENSSFVAHQPLHSHYL 178 Query: 177 LPYAEKMLV 185 P L Sbjct: 179 DPTDAAFLP 187 >gi|307152071|ref|YP_003887455.1| DNA repair protein RecO [Cyanothece sp. PCC 7822] gi|306982299|gb|ADN14180.1| DNA repair protein RecO [Cyanothece sp. PCC 7822] Length = 283 Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 57/182 (31%), Gaps = 4/182 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-GNLVRVNWRSR 61 +Q IIL GE + ++ ++T +YG + H+ + +A +V + Sbjct: 5 YQATGIILKGMPLGESDRLVTILTSEYGLIRAVAPGARKHKSRLRGRAELFVVNQLLIVK 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + E LES+ + +P +ELY++LN L Sbjct: 65 GRSLEKIIQAETLESYPGLSRDLGKLTVSQYIAELVLSLALSEQPQIELYELLNEHLRRI 124 Query: 122 KIPSVIGKIFVQIE---LMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + S ++ + LL G C +T ++ G Sbjct: 125 EQLSTPQSLYAHLAQAVYHLLAIAGVAPVFHSCCLTHQPIQTNFIDAHWRVGFSFDSGGT 184 Query: 179 YA 180 Sbjct: 185 IN 186 >gi|251772616|gb|EES53181.1| Recombination protein O (RecO) [Leptospirillum ferrodiazotrophum] Length = 289 Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 68/238 (28%), Gaps = 10/238 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + +IL Y + I+ +R+ G GF R S + L R R Sbjct: 5 EVLILRSGRYLDSAKIVTFFSREGGLGTGFARGATSRDNRFGASLEPLTRSRLSLRRGTL 64 Query: 66 LG---EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 G +V+ S+ ++ + L FLPE P L+ + L+ Sbjct: 65 AGLARILHADVIASYPRIRTDYDRLVWAGLIVRFLLGFLPESHPEPSLFALACGALDRLD 124 Query: 123 IPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 + L +G+G+ C G T + Sbjct: 125 GRVGPPAAVWEGFARQALALLGWGIPAAVCRRCGRTGG----EKEEREEAESHYFRASDG 180 Query: 182 KMLVLPSFLWKEEQTID--ADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 + L + + + +A +++ L R FL +++ Sbjct: 181 AVFCRSCRLAEGGGELWGVEAEVLNALSRNGGSVDEDVLSPGPGPLLRERLAFLDRVI 238 >gi|220934268|ref|YP_002513167.1| DNA repair protein RecO [Thioalkalivibrio sp. HL-EbGR7] gi|219995578|gb|ACL72180.1| DNA repair protein RecO [Thioalkalivibrio sp. HL-EbGR7] Length = 233 Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 70/234 (29%), Gaps = 16/234 (6%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M IL VR Y + + IL+++T GR R +S + + + W+ Sbjct: 1 MNRVHTTGFILHVRPYRDNSHILDLLTEAEGRTACLFRG-RSQKARS----FARYELAWQ 55 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R +LE A +L++ G + LP + P ++ + Sbjct: 56 GRGELKT----LSLLEEQSAVVLAAQRLACGFYVNELALKLLPRQIPLEGFFEDYAHTVA 111 Query: 120 CHKIPSVI-GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 P + E LL +G GL+ +D + G + Sbjct: 112 ALARPDEDLEPLLRGYERSLLHYLGEGLESIDLAALEP-EDCYVYEAQRGLRLAGPGERS 170 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENF 232 + + A +L L+ + LQ I R F Sbjct: 171 RGPCVHGETLRELLGGGVQTPRGRQEAKRLLRGLLD-HHLQGRRIM---SRALF 220 >gi|134300314|ref|YP_001113810.1| DNA repair protein RecO [Desulfotomaculum reducens MI-1] gi|172044328|sp|A4J7D2|RECO_DESRM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|134053014|gb|ABO50985.1| DNA replication and repair protein RecO [Desulfotomaculum reducens MI-1] Length = 256 Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 51/177 (28%), Gaps = 2/177 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 ++ DAI+L R E + IL V + Q G+ + + Sbjct: 3 IYKLDAIVLKSRDMREADKILTVYSIQRGKQRIVAHGAAKPNSRKRGAVQPFCFSEFMLH 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + L+ A++ L I L + L Sbjct: 63 RGREIDAISQAELKEGFAEIRYDLDRLTAAAYITELLDGFVAEGEPNQNLFSLLYSALHL 122 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT--GVTQDLLWVSPKSGGAVCRSVG 176 I E LL G DLT C V + + + + + GG +C+ Sbjct: 123 IAVGNSEMILRGFEAKLLGFSGLQPDLTNCSVCGAEIRETKVSFAVQQGGILCKDCA 179 >gi|91202469|emb|CAJ72108.1| hypothetical protein kustd1363 [Candidatus Kuenenia stuttgartiensis] Length = 257 Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 54/160 (33%), Gaps = 4/160 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP---ILQAGNLVRVNW 58 + DAI LG Y + + I+ TR YG+ + + + + R+ + Sbjct: 3 ILKTDAITLGRTDYSDSSQIIIFYTRDYGKINTIAKGFKRSSGKYNSKAIDLLTHYRILF 62 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIF 117 + L VL+++ + + F + +P L+D+ Sbjct: 63 IKKEHSTLHTLTDAVLQNNYPAFRHDLDKYFRASCMAELVNEFTEKNDPNEPLFDLFLNT 122 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 LN + + EL +L +G+ + C+ Sbjct: 123 LNHIATDTNTTIWLLAFELKMLNILGYLPEWEHCIHCKKK 162 >gi|323464339|gb|ADX76492.1| DNA repair protein RecO [Staphylococcus pseudintermedius ED99] Length = 256 Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 86/252 (34%), Gaps = 17/252 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + II+ YGE + I+ ++ + VR + + V+ + Sbjct: 1 MLVKQKGIIIKAVDYGESDKIITILNEHGAKVPLMVRRAKKIKSGLQATTQIFVQGLFIY 60 Query: 61 RL-AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 +VL + Y + + R + E +Y +L+ + Sbjct: 61 NQWKGMGTLTSVDVLNLNYELRQDIYAHSYASLCLETIDRAMETDEINPTMYRLLDFTFD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGGAVCRS--- 174 + I + L + GF +DL+KCV+TG T L S K G + Sbjct: 121 RFQQGVSPQLIANIVMLKCMPRFGFDVDLSKCVMTGETNPAKLTHFSFKFDGIIATEVTH 180 Query: 175 ---VGLPYAEKMLVLPSFLWK-EEQTIDADSLKSAFQLTDYFLNKYAL---QHNIIHCHL 227 LP + K + L L I+A ++ A + + ++K+ L + Sbjct: 181 RDPHALPLSNKTIYLTYVLKDLPLDKINALRIQDA--IVEE-MSKFILLLYKEYAGMYFK 237 Query: 228 LRENFLGKLLEL 239 + + +L L Sbjct: 238 S-QRLINQLNRL 248 >gi|218439778|ref|YP_002378107.1| DNA repair protein RecO [Cyanothece sp. PCC 7424] gi|226737858|sp|B7K8P1|RECO_CYAP7 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|218172506|gb|ACK71239.1| DNA repair protein RecO [Cyanothece sp. PCC 7424] Length = 283 Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 73/237 (30%), Gaps = 11/237 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN-WRSR 61 +Q IIL GE + ++ ++T +YG V + H+ + ++ V + Sbjct: 5 YQATGIILKGMPLGEADRLVTILTSEYGLIQAVVPGARKHKSRLRGRSELFVVNQLLIVK 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + E LES+ + +P +ELY++LN L Sbjct: 65 GRSLDKLIQAETLESYPGLSRDLGKLTASQYLAELVLSLALCEQPQIELYELLNEHLRRI 124 Query: 122 KIPSVIGKIFVQIE---LMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + ++ + LL G + +C ++ + ++ G Sbjct: 125 EQKATPQTLYPHLAQAVFHLLAIAGVAPQVYQCCLSREPIETNFIDSLWRVGFSFESGGA 184 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAF--QLTDYFLNKYALQHNIIHC-HLLRENF 232 F + + + + +LT + LQ + F Sbjct: 185 INLSSDRRQPF--QPSDDLKKEIFLNKLNWKLTA--VELTLLQQLGQKFLPQAYDIF 237 >gi|224024597|ref|ZP_03642963.1| hypothetical protein BACCOPRO_01324 [Bacteroides coprophilus DSM 18228] gi|224017819|gb|EEF75831.1| hypothetical protein BACCOPRO_01324 [Bacteroides coprophilus DSM 18228] Length = 252 Score = 75.2 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 50/169 (29%), Gaps = 5/169 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + I+L Y +K+ I+ + T Q GR + +S + + Q +LV Sbjct: 12 MLRKSKGIVLHTVKYSDKSNIVHIYTEQGGRMSFLIPASRSRKSAVNGLLFQPLSLVEFE 71 Query: 58 WRSRL-AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R + + + + L L+R L E L+ L Sbjct: 72 ADIRPRSGLHPIREAKSWQPFQSLPYDPYKSAIALFLAEFLYRALKEEAENAPLFAYLVH 131 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVS 164 + + + + L + +G ++ L Sbjct: 132 SVLWLDACDTNFANFHLVFLMRLSRFLGLYPNVEGYAEGDCFDLLNACF 180 >gi|307609737|emb|CBW99248.1| DNA repair protein recO [Legionella pneumophila 130b] Length = 229 Score = 75.2 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 67/206 (32%), Gaps = 10/206 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A ++ + G+ + L++ T++ G + G++ + Q +LQA + W S + Sbjct: 8 AWVIHKQWSGDTSARLKLFTKELGLINCLCKGGRTPKKQSLLQAFIPL---WVSIEERYD 64 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 + + + L GL L+ L P +L+D LN + Sbjct: 65 QYYTRNIESTSSRLDLEGHSLFSGLYINELLYYTLSPDFPDPDLFDAYLFTLNGIALARE 124 Query: 127 IGKIF---VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I + E LLK G+ TG L V V + +K Sbjct: 125 REAIEALLRRFEWALLKACGYTFSFLHEARTG----ELIVPDSHYQFVAGEGFILGGDKK 180 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLT 209 + L + + + + Sbjct: 181 IPGEHLLAIAADNLSESAYLKSAKFI 206 >gi|319892623|ref|YP_004149498.1| DNA recombination and repair protein RecO [Staphylococcus pseudintermedius HKU10-03] gi|317162319|gb|ADV05862.1| DNA recombination and repair protein RecO [Staphylococcus pseudintermedius HKU10-03] Length = 256 Score = 75.2 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 86/252 (34%), Gaps = 17/252 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + II+ YGE + I+ ++ + VR + + V+ + Sbjct: 1 MLVKQKGIIIKAVDYGESDKIITILNEHGAKVPLMVRRAKKIKSGLQATTQIFVQGLFIY 60 Query: 61 RL-AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 +VL + Y + + R + E +Y +L+ + Sbjct: 61 NQWKGMGTLTSVDVLNLNYELRQDIYAHSYASLCLETIDRAMETDEINPTMYRLLDFAFD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGGAVCRS--- 174 + I + L + GF +DL+KCV+TG T L S K G + Sbjct: 121 RFQQGVSPQLIANIVMLKCMPRFGFDVDLSKCVMTGETNPAKLTHFSFKFDGIIATEVTH 180 Query: 175 ---VGLPYAEKMLVLPSFLWK-EEQTIDADSLKSAFQLTDYFLNKYAL---QHNIIHCHL 227 LP + K + L L I+A ++ A + + ++K+ L + Sbjct: 181 RDPHALPLSNKTIYLTYVLKDLPLDKINALRIQDA--IVEE-MSKFILLLYKEYAGMYFK 237 Query: 228 LRENFLGKLLEL 239 + + +L L Sbjct: 238 S-QRLINQLNRL 248 >gi|326203515|ref|ZP_08193379.1| DNA repair protein RecO [Clostridium papyrosolvens DSM 2782] gi|325986335|gb|EGD47167.1| DNA repair protein RecO [Clostridium papyrosolvens DSM 2782] Length = 253 Score = 75.2 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 58/168 (34%), Gaps = 2/168 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SRLAQ 64 +++ + GE + I+ V+T + G+ +N + + + + + + Sbjct: 11 KGLVIREVNTGEADKIITVLTAEEGKISIAAKNARRAKSSLSAGSQLFAYSEYMLFKGKE 70 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 +V+E + Y + + + E EP E+ +L L Sbjct: 71 LYNMSSCQVIEPNYEIRNDIEKLTYCSHILELISDNVQEGEPSEEVLRLLLNTLYVISKT 130 Query: 125 SVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV 171 + K I V EL L+ +G+ + CV G QD + Sbjct: 131 NRPLKLITVVFELRLMSLLGYEPHVISCVNCGKAQDESMYFDFDSSGL 178 >gi|220928033|ref|YP_002504942.1| DNA repair protein RecO [Clostridium cellulolyticum H10] gi|219998361|gb|ACL74962.1| DNA repair protein RecO [Clostridium cellulolyticum H10] Length = 250 Score = 75.2 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 69/185 (37%), Gaps = 3/185 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SRLAQ 64 +++ + GE + I+ V+T + G+ +N + + + ++ + + Sbjct: 7 KGLVIKEINTGEADKIITVLTAEEGKISIAAKNARRAKSSLGAGSQLFAYSDYMLFKGKE 66 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 +V+E + +Y + + + E EP E+ +L L Sbjct: 67 LYNMSSCQVIEPNYEIRNDIEKLIYCSHILELILDNVQEGEPSEEILQLLLNTLYVISKT 126 Query: 125 SVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK-SGGAVCRSVGLPYAEK 182 + + + EL L+ +G+ + CV G QD S G +C+ P + Sbjct: 127 NRPLNLVTRVFELRLMSLLGYEPHVISCVNCGKAQDENMYFDFDSSGLICKKCLNPRSRS 186 Query: 183 MLVLP 187 L+LP Sbjct: 187 FLLLP 191 >gi|167767682|ref|ZP_02439735.1| hypothetical protein CLOSS21_02217 [Clostridium sp. SS2/1] gi|317499139|ref|ZP_07957416.1| DNA repair protein RecO [Lachnospiraceae bacterium 5_1_63FAA] gi|167710699|gb|EDS21278.1| hypothetical protein CLOSS21_02217 [Clostridium sp. SS2/1] gi|291560816|emb|CBL39616.1| DNA replication and repair protein RecO [butyrate-producing bacterium SSC/2] gi|316893552|gb|EFV15757.1| DNA repair protein RecO [Lachnospiraceae bacterium 5_1_63FAA] Length = 240 Score = 75.2 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 60/176 (34%), Gaps = 2/176 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 + ++L + GE + + ++T++ GR F R + Q + Sbjct: 4 EIKVTGMVLQAGNIGEYDKRIVLLTKERGRISAFARGAKKATSQYAAACQPFTFGEFSLY 63 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN-- 119 +N + +E++ L +Y L +L L Sbjct: 64 EGKNSFNLMWAGVENYFDTLKKDLDLIYYASYFCELASYLTRENNDELEILKLLYQTLRA 123 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 K I + E+ +L G G++ ++CV G +DL+W + G VC Sbjct: 124 LEKKTIDIELVRCIYEIKILALYGIGIEASRCVKCGSREDLIWFDARESGVVCNKC 179 >gi|295424886|ref|ZP_06817601.1| recombination protein O [Lactobacillus amylolyticus DSM 11664] gi|295065452|gb|EFG56345.1| recombination protein O [Lactobacillus amylolyticus DSM 11664] Length = 255 Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 28/185 (15%), Positives = 65/185 (35%), Gaps = 2/185 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW--RSRLA 63 II + Y E +++ +++T++ G VR + Q N + + Sbjct: 9 QGIIFKRQKYKEADLLAKIITKEDGIITLVVRGALRPKSQLNAATLNFSYGRYVIYTNGR 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ ++ + + Y + + E +P + Y++ L Sbjct: 69 GLSNLRTYKEVKQYDGLYNDLTKNAYASFILDLIDHAFVEYQPLGKYYELAKFALERINE 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + I +++ +LK G +L C++ G + S K GG +C ++ Sbjct: 129 NTDPEMITQIVQMQMLKAYGVEPELRHCLICGKETGIFDYSIKLGGVICSDHFATENSRL 188 Query: 184 LVLPS 188 + P Sbjct: 189 HLKPK 193 >gi|315604782|ref|ZP_07879842.1| DNA repair protein RecO [Actinomyces sp. oral taxon 180 str. F0310] gi|315313511|gb|EFU61568.1| DNA repair protein RecO [Actinomyces sp. oral taxon 180 str. F0310] Length = 245 Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 62/203 (30%), Gaps = 6/203 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++D+AI+L GE + I+ ++T ++G+ + + + ++ +++ Sbjct: 4 YRDEAIVLRTHKLGEADRIITLLTAEHGQVRSVAKGVRRTTSKFGARVEPFSVIDAQLH- 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE---PCLELYDMLNIF 117 R + + + + ++ IV L + +L Sbjct: 63 RGRTLDTLTQVASIAQYGDAIAANYDLYLAATVIVETAERLTTDATDGTHSQYLLLLGAL 122 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + I L L G+ C + G S GG VC + Sbjct: 123 NALARSRHDPTLIRTSYTLRALALAGWAPSCFDCAICGSKGPHGSFSIPDGGTVCDTCRP 182 Query: 178 PYAEKMLVLPSFLWKEEQTIDAD 200 P A L + + D Sbjct: 183 PGASSPAPDTVALLGQLLSGDWA 205 >gi|270159973|ref|ZP_06188629.1| DNA repair protein RecO [Legionella longbeachae D-4968] gi|289165283|ref|YP_003455421.1| DNA repair protein recO [Legionella longbeachae NSW150] gi|269988312|gb|EEZ94567.1| DNA repair protein RecO [Legionella longbeachae D-4968] gi|288858456|emb|CBJ12334.1| DNA repair protein recO [Legionella longbeachae NSW150] Length = 229 Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 71/212 (33%), Gaps = 11/212 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +A +L + G+ + + +TR++G + G++ + Q +LQA + V+ Sbjct: 1 MTRTVEAWVLHKQWSGDTSARVSFLTREFGIVQCLYKGGRTPKKQALLQAFTPLWVSIAE 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R + + + L + GL L+ L L++ LN Sbjct: 61 RYDR---YYIQSIESISSTLPLIGNALFAGLYINEILYYALAPNSSDSMLFEAYLFTLNK 117 Query: 121 H---KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 K V+ + + E LL+ G+ LT+ T + + G Sbjct: 118 LVSTKDRLVLEALLRRFEWTLLRTCGYSFSLTQEARTEN-----LILAELHYQFIAGEGF 172 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLT 209 + L + + + + ++ Sbjct: 173 VSDSGGIPGEHILALAQDNLSDTAYLKSAKII 204 >gi|237785900|ref|YP_002906605.1| DNA repair protein RecO [Corynebacterium kroppenstedtii DSM 44385] gi|237758812|gb|ACR18062.1| DNA repair protein RecO [Corynebacterium kroppenstedtii DSM 44385] Length = 266 Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 65/196 (33%), Gaps = 20/196 (10%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWR 59 ++D A+++ + E + I+ ++TR++G + + ++ + L +V V Sbjct: 4 NYRDRALVVRHYDFSEADRIVVLLTREHGVVRAVAKGVRKNKSRFGGRLAPFVVVDVQLY 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 E + S+ ++ S +++ + L E L D + Sbjct: 64 VGRGSLATLTSAETVRSYNQLIVDSYAKYTAACAVLDVAEKLTVGE-EATLCDDAAAAIR 122 Query: 120 CHKIPSVIGKIFV--------------QIELMLLKNI---GFGLDLTKCVVTGVTQDLLW 162 + +++ +L+ + G+ L C G Sbjct: 123 DIAHSWPVDSAAQGEQSSVRGEGLPTLRVDKFVLRALAAEGWEPQLFSCAGCGQPGPHHA 182 Query: 163 VSPKSGGAVCRSVGLP 178 S GGAVC + P Sbjct: 183 FSASIGGAVCGACRPP 198 >gi|149371051|ref|ZP_01890646.1| DNA repair protein [unidentified eubacterium SCB49] gi|149355837|gb|EDM44395.1| DNA repair protein [unidentified eubacterium SCB49] Length = 239 Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 44/155 (28%), Gaps = 5/155 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM----QPILQAGNLVRV 56 M +AI+L + YGE ++I T G +R + Q + + Sbjct: 1 MVTTTNAIVLSTKKYGEADLIATCYTASDGVKTYMLRGILKSKKGKIRASHFQLLTQLEI 60 Query: 57 NWRSRLAQNLGEFRFEVLE-SHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + L + + + + L + E E LY+ ++ Sbjct: 61 EANHKNKGTLEYLKDAKIAVPYQTLHTDIVKSCLVMFLSEILTSTIREEESNNSLYNFIS 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTK 150 L + L L +GF D Sbjct: 121 KSLETLDHAEEFANFHIYFLLQLSTYLGFYPDDNN 155 >gi|303235629|ref|ZP_07322236.1| DNA repair protein RecO [Prevotella disiens FB035-09AN] gi|302484076|gb|EFL47064.1| DNA repair protein RecO [Prevotella disiens FB035-09AN] Length = 241 Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 74/231 (32%), Gaps = 10/231 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRN---GQSHRMQPILQAGNLVRVN 57 M + I+L YG+ +I++V+T GR VR + + Q L+ + Sbjct: 1 MNTKTRGIVLRSVRYGDAKLIIDVLTELSGRISFAVRVPKTAKGKLKRQYFQPMTLLDME 60 Query: 58 WRSRLAQNLGEFRFEVLE-SHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R L + + + + L L+ + + L++ + Sbjct: 61 YEWRERNTLQNMKDVRIALPYTSIPFEPVKSTMLLFLAEFLYYVTRDEQQNATLFNYIYN 120 Query: 117 FLNCHKIPSVIGKIFVQIELMLL-KNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGGAVCR 173 L F + ++ L K +GF L + + + S A Sbjct: 121 SLEWLDNSEKDYANFHLVFMIRLGKFLGFQPYLEEYTQGAYFDLRNGCFTSSLPFHADYL 180 Query: 174 SVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIH 224 L+ +F + + + ++TDY L+ Y L + Sbjct: 181 PQKESEQMYTLMRMTFDTMKVFKLSHNERN---RITDYILHYYRLHVPNMP 228 >gi|238917281|ref|YP_002930798.1| DNA repair protein RecO (recombination protein O) [Eubacterium eligens ATCC 27750] gi|238872641|gb|ACR72351.1| DNA repair protein RecO (recombination protein O) [Eubacterium eligens ATCC 27750] Length = 247 Score = 74.8 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 28/178 (15%), Positives = 57/178 (32%), Gaps = 2/178 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SRLAQ 64 +IL GE + L ++T++YG+ F + + I + + + R + Sbjct: 8 TGMILSAMPVGEYDRRLVILTKEYGKITVFAKGARKPNSTLIGVTRSFIFGTFEVYRGRE 67 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI- 123 + ++ E + + Y + E E+ ++L I L Sbjct: 68 SYTMYKASAKEYFENVVNDLNAVCYACYFAEIADYYGRENLDASEMINLLYITLKALGRG 127 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I E+ ++ G D C G +L S G C++ + Sbjct: 128 AVSHELIRFIYEIRMVAVNGECPDFFTCHECGREDNLYVYSYSRNGLCCKNCATNVYD 185 >gi|255282514|ref|ZP_05347069.1| DNA repair protein RecO [Bryantella formatexigens DSM 14469] gi|255266807|gb|EET60012.1| DNA repair protein RecO [Bryantella formatexigens DSM 14469] Length = 247 Score = 74.8 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 70/213 (32%), Gaps = 2/213 (0%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++L GE + + ++T++ G+ GF + + + A + + Sbjct: 8 TGMVLSAVPVGEYDKRIVLLTKERGKISGFAKGARRQNSPLMAAAKPFSFGTFECYEGRT 67 Query: 66 LGEFRFEVLESHC-AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + ++ L YG+ + + E EL +L + L + Sbjct: 68 SYNIYQAQISNYFEGLSLDFEGAYYGMYFLEFADYYARENSDEKELLKLLYVSLRALENQ 127 Query: 125 SVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + K+ EL + G ++ C V G T+ L S G VC + Sbjct: 128 HLPKKLVRYVFELRAMVINGEYPEVFCCTVCGSTEHLTGYSHAGNGVVCADCLRAAHAET 187 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 L+ + + F +++ L ++ Sbjct: 188 LLESTIFTMQYVVATPLEKLYTFTVSEEVLEEF 220 >gi|304383675|ref|ZP_07366134.1| recombination protein O [Prevotella marshii DSM 16973] gi|304335199|gb|EFM01470.1| recombination protein O [Prevotella marshii DSM 16973] Length = 241 Score = 74.8 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 52/163 (31%), Gaps = 5/163 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRN---GQSHRMQPILQAGNLVRVN 57 M + AI+L YG+ +++E++T ++GR R + + Q L+ + Sbjct: 1 MLIKTRAIVLHTFKYGDAKLVIELLTEKFGRLSFMSRIPKTAKGKLKKQFFQPLTLLEIE 60 Query: 58 WRSRLAQNLGEFRFEVLE-SHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R L R + + L L+ + L++ L Sbjct: 61 FDMRQRGGLQTMRDARIALPFVSIPFEPVKLSLSLFVAEFLYYATRSEQENTPLFNYLIN 120 Query: 117 FLNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 + + L L + +GF +L T Sbjct: 121 CIEWLDNSCGAFANFHLVFTLRLSRFLGFYPNLEASAATAYFD 163 >gi|295693062|ref|YP_003601672.1| DNA repair protein reco [Lactobacillus crispatus ST1] gi|295031168|emb|CBL50647.1| DNA repair protein recO [Lactobacillus crispatus ST1] Length = 251 Score = 74.8 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 59/185 (31%), Gaps = 2/185 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 II + Y E +++ ++MT+Q G V+ + + N + + Sbjct: 9 QGIIFKRQKYKEADLLAKIMTKQDGIMTLIVKGALKPKSRLSAATLNFSIGTYVIYTSGK 68 Query: 66 LGEFRFEVLESHC--AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 E+ + Y + E +P + YD+ L Sbjct: 69 GLSNLRTYKEARQFDGLYNDLTKNAYISFIFDLIDHAFVEYQPIGKYYDLALFALKKIDS 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I +++ +L G L CV+ G + + S K GG +C +M Sbjct: 129 GVDAEMITQIVQMKILAAYGVEPQLKHCVICGKEKGVFDYSIKMGGVICSDHFSTVTSRM 188 Query: 184 LVLPS 188 + P Sbjct: 189 HLKPK 193 >gi|258511946|ref|YP_003185380.1| DNA repair protein RecO [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478672|gb|ACV58991.1| DNA repair protein RecO [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 271 Score = 74.8 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 52/157 (33%), Gaps = 4/157 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 W +A+++ V YGE++ IL ++T G R G + A + + Sbjct: 4 IWTTEAVVVRVVRYGERDAILTLLTET-GLVTAMARGGARPVGRLSAAARLCAQGTYVLY 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC--LELYDMLNIFLN 119 + +G+ R + L + + L P Y L+ Sbjct: 63 QGRGMGDVRQAEIARQRRALHEDVVKAAYAAYLCDLASRAIPERPDAPPAAYRQFVAVLD 122 Query: 120 CHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTG 155 + V + + EL + +G G D C+ G Sbjct: 123 GLEADRVPADVLARAFELKVCAWLGVGPDWRVCIRCG 159 >gi|218288618|ref|ZP_03492895.1| DNA repair protein RecO [Alicyclobacillus acidocaldarius LAA1] gi|218241275|gb|EED08450.1| DNA repair protein RecO [Alicyclobacillus acidocaldarius LAA1] Length = 271 Score = 74.8 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 52/157 (33%), Gaps = 4/157 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 W +A+++ V YGE++ IL ++T G R G + A + + Sbjct: 4 IWTTEAVVVRVVRYGERDAILTLLTET-GLVTAMARGGARPVGRLSAAARLCAQGTYVLY 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC--LELYDMLNIFLN 119 + +G+ R + L + + L P Y L+ Sbjct: 63 QGRGMGDVRQAEIARQRRALHEDVVKAAYAAYLCDLASRAIPERPDAPPAAYRQFVAVLD 122 Query: 120 CHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTG 155 + V + + EL + +G G D C+ G Sbjct: 123 GLEADRVPADVLARAFELKVCAWLGVGPDWRVCIRCG 159 >gi|255037791|ref|YP_003088412.1| DNA repair protein RecO [Dyadobacter fermentans DSM 18053] gi|254950547|gb|ACT95247.1| DNA repair protein RecO [Dyadobacter fermentans DSM 18053] Length = 231 Score = 74.8 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 51/168 (30%), Gaps = 7/168 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP----ILQAGNLVRV 56 M I L Y E +II + T +G V +S + + Q L+ + Sbjct: 1 MLHTTRGIALSYIRYKESSIIARIYTETFGIQTYIVNGVRSSKSKSNRIAFFQPLTLLDL 60 Query: 57 NWRSRLAQNLGEFRF--EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 + ++ + + GL L + L E E L+ + Sbjct: 61 VVYHKNKEDSIHRISELKCYAPFASIPYDVIKSGLGLFVTEMLGKTLREEENNEPLFHFI 120 Query: 115 NIFLNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLL 161 + +Q + L +GFG++ + + + + Sbjct: 121 EQSVLYLDGAEGGYENFHIQFLMQLAHYLGFGVETVDDLESELKDNHF 168 >gi|199599318|ref|ZP_03212716.1| Recombinational DNA repair protein (RecF pathway) [Lactobacillus rhamnosus HN001] gi|199589757|gb|EDY97865.1| Recombinational DNA repair protein (RecF pathway) [Lactobacillus rhamnosus HN001] gi|259649851|dbj|BAI42013.1| DNA repair protein RecO [Lactobacillus rhamnosus GG] Length = 271 Score = 74.8 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 71/202 (35%), Gaps = 4/202 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS--RLA 63 + +++ ++Y E +++++++T Q+G+ + V + ++ R + Sbjct: 9 EGLVMSRQNYRESDMLVKILTDQFGKKMFLVNRARKPGFTLAAGILPFTHADYIGEVRDS 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + +L Y L P+ P + + L+ Sbjct: 69 GLSYLSAIKNPTQYRQISNDITLNAYAAYIFGLLDLAFPDGRPVGFWFKQVKQALHLIDT 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I +E+ +LK G + CV+ G T L S GG +C+ ++ Sbjct: 129 GLDPQIIANVVEVQMLKAYGVEPNWRGCVIDGRTDLPLDFSESYGGLLCQQHWDKDPHRL 188 Query: 184 LVLPS--FLWKEEQTIDADSLK 203 P F + T+D +K Sbjct: 189 HASPRAIFYLRRFSTLDLSQVK 210 >gi|153853790|ref|ZP_01995146.1| hypothetical protein DORLON_01137 [Dorea longicatena DSM 13814] gi|149753540|gb|EDM63471.1| hypothetical protein DORLON_01137 [Dorea longicatena DSM 13814] Length = 239 Score = 74.8 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 2/184 (1%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGE 68 IL GE + + ++TR+ G+ F R + + + + Sbjct: 2 ILTAAPIGEYDRRVVILTRERGKISAFARGARRPNSALMGVTSPFSFGEFTVYEGRTSYT 61 Query: 69 FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCL-ELYDMLNIFLNCH-KIPSV 126 + ++ +L + Y + L + E+ +L L I Sbjct: 62 LVSASVSNYFQELRTDVEGAYYGFYFMDLAGYYAREANDETEMLKLLYQTLRALTNIHIP 121 Query: 127 IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVL 186 I EL + G G + +C++ G + S + GG +C ++ + +L Sbjct: 122 NELIRCIYELKTITVNGEGPQVMECIMCGDKEREKVFSIRRGGVICTQCAGHISDGIRLL 181 Query: 187 PSFL 190 PS L Sbjct: 182 PSTL 185 >gi|238927456|ref|ZP_04659216.1| DNA repair protein RecO [Selenomonas flueggei ATCC 43531] gi|238884738|gb|EEQ48376.1| DNA repair protein RecO [Selenomonas flueggei ATCC 43531] Length = 243 Score = 74.8 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 57/197 (28%), Gaps = 1/197 (0%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I+LG RS+GE + I+ + T++ G + R V + + + Sbjct: 7 EGIVLGTRSWGEADKIVTIYTKERGLVRAAAFGCRRPRSPLAGAMQMFVHADLQFAEGRR 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 L + + + ++ + L + E + + Sbjct: 67 LETVKTASVRASHHRIADDLMALAYATFTAEVVCAFMPEGVADEHFFDTLALIVTAFETR 126 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 + L L G C+ G + + GGA+C + A Sbjct: 127 HPRVAALAAVLRTLDAAGLQQTYDHCIHCGAAIEGDAFFHAGEGGALCGTCAAAGARPFA 186 Query: 185 VLPSFLWKEEQTIDADS 201 L + Q +D Sbjct: 187 AALRALLTDLQHLDWTD 203 >gi|319440589|ref|ZP_07989745.1| DNA repair protein RecO [Corynebacterium variabile DSM 44702] Length = 257 Score = 74.8 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 69/191 (36%), Gaps = 14/191 (7%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRV-NW 58 ++D+A ++ GE + I+ ++TR +G G + + + + L V V + Sbjct: 5 NYRDEAFVVRTHDLGEADQIIVLLTRHHGIVRGVAKGVRRTKSRFGARLDRFCRVDVLIY 64 Query: 59 RSRL-----AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCL----- 108 R + ++ +++ Y +++ + + Sbjct: 65 PGRNRAKIDGGLATLSDTAAVRTYAPPIVADVDRYYAAVAMLEIAELTVRGDYGEGEDAT 124 Query: 109 ELYDMLNIFLNCHKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKS 167 ++D+L+ L + + + ++ L +L+ G+ L C G P + Sbjct: 125 RIFDLLDAALGDLGVSPLPPRTQADRLVLQVLEVAGWAPSLVDCAQCGARGPHRAFHPHA 184 Query: 168 GGAVCRSVGLP 178 GGAVC P Sbjct: 185 GGAVCVRCRPP 195 >gi|170077380|ref|YP_001734018.1| DNA repair protein RecO [Synechococcus sp. PCC 7002] gi|169885049|gb|ACA98762.1| DNA repair protein RecO [Synechococcus sp. PCC 7002] Length = 270 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 49/160 (30%), Gaps = 9/160 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M ++ IIL GE + ++ +++ + G + HR + LV + Sbjct: 1 MSFKVTGIILKGSPLGEADRLVTILSPEQGLVKAVAPGARQHRSALRGRTELLVVNEFVL 60 Query: 61 -RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R + ++L S+ + G + P ELY++L L Sbjct: 61 TRGRSLDRIQQADMLTSYSGLRHDFAKLAVGQYLAEVTHYLAVSQTPQPELYELLREHLR 120 Query: 120 CHKIPSVIGK--------IFVQIELMLLKNIGFGLDLTKC 151 + Q LL GF + C Sbjct: 121 RIEALEFQPSARVTQIIAHLTQALFHLLAIAGFAPQVQHC 160 >gi|161344755|ref|NP_442000.2| DNA repair protein RecO [Synechocystis sp. PCC 6803] gi|119370514|sp|Q55569|RECO_SYNY3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 271 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 20/186 (10%), Positives = 56/186 (30%), Gaps = 6/186 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 +Q I++ ++GE + ++ + + +YG + + + + + + + Sbjct: 5 YQTLGIVVKGMAFGESDRLVTIFSPEYGLIRAIAPGARKPKSSLRGRTELFVVNQFLLFA 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + S+ + G I + E LY++ L Sbjct: 65 GKSLDRINQAETQ-YSYPGLGQNVCNLAAGQYLIELILALGTEASAQTSLYELFTEHLRR 123 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + + I+ + L + G C +T T + + +G Sbjct: 124 LETEATVENIYGHLAQALFHCLGAEGIAPQFHHCAITAQTISPNFYDRQWRVGFSPELGG 183 Query: 178 PYAEKM 183 + Sbjct: 184 IVDLRS 189 >gi|104783261|ref|YP_609759.1| DNA repair protein RecO [Pseudomonas entomophila L48] gi|122402120|sp|Q1I5W0|RECO_PSEE4 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|95112248|emb|CAK16975.1| Recombination protein RecO [Pseudomonas entomophila L48] Length = 227 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 78/232 (33%), Gaps = 14/232 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A +L R+Y E + +++ +T GR +R + + +++ + V R R Sbjct: 8 PAYVLHSRAYKETSALVDFLTP-QGRVRAVLRRARG-KGGSLVRPFVPLEVELRGRGELK 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + A L GL L R LP P L++ + L Sbjct: 66 N---VGRLDSTGIAAWLHGDALFSGLYLNELLMRLLPAEAPYPALFEHYTLTLQALAAGR 122 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + + E LL +G+ L++ V + + R + + Sbjct: 123 PLEPLLRSFEWRLLDELGYAFSLSQDVNDAAVVADGLYRLRVDAGLERV--ELFQPGLFK 180 Query: 186 LPSFLWKEEQTID-ADSLKSAFQLTDYFLNKYALQHNIIHCHL-LRENFLGK 235 L E D +L +A + L + AL ++ L RE F + Sbjct: 181 GSELLALAEADWDAPGALLAAKR-----LMRQALAVHLGTKPLVSRELFRKR 227 >gi|325261979|ref|ZP_08128717.1| DNA repair protein RecO [Clostridium sp. D5] gi|324033433|gb|EGB94710.1| DNA repair protein RecO [Clostridium sp. D5] Length = 246 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 63/212 (29%), Gaps = 3/212 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++L GE + + ++T++ G+ F + + + + ++ Sbjct: 7 TGMVLSTAPIGEYDRRVVILTKEQGKLAAFAKGSRRPNSPLVGAVNPFTFGEFTMYEGRS 66 Query: 66 LGEFRFEVLESHCA-KLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH-KI 123 + + ++ A YG + + E E+ +L + Sbjct: 67 SHTIQSVNVLNYFAELREDIVGAYYGFYFLEFANYYTKESNDEREMLKLLYQTMRALTNP 126 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP-YAEK 182 I EL G G ++ +CV G + S + GG VC Sbjct: 127 HIPDRLIRYIFELKAYCINGEGPEVFQCVSCGDKERPAVFSVRKGGLVCSECDRDIIDGI 186 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLN 214 L + + F +TD L+ Sbjct: 187 RLDNSTLYSMQYIESSKIEKLYTFNVTDKVLD 218 >gi|241895550|ref|ZP_04782846.1| recombination protein O [Weissella paramesenteroides ATCC 33313] gi|241871128|gb|EER74879.1| recombination protein O [Weissella paramesenteroides ATCC 33313] Length = 263 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 69/172 (40%), Gaps = 2/172 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS--RLA 63 DAI++ R + EK+++++++TRQ G+ + ++R+G+S R Q + L + Sbjct: 6 DAIVMYQRDHKEKDLMVKMLTRQAGKRMFYIRHGKSQRYQFSAEIQPLRTATFEGTINST 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + + L Y + + + +P YD++ LN Sbjct: 66 GMSFINDVKATKDTSFLMTDIVLNAYMTYILGLIDAAFVDNQPIPRWYDLVIEALNKLNS 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 I E+ LL G KCV+ G + L S + G +C+ Sbjct: 126 GLDPQGIANYFEIQLLPVFGMQPTWGKCVICGRSDLPLDFSEEFNGTLCQQH 177 >gi|196232564|ref|ZP_03131416.1| DNA repair protein RecO [Chthoniobacter flavus Ellin428] gi|196223326|gb|EDY17844.1| DNA repair protein RecO [Chthoniobacter flavus Ellin428] Length = 177 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 45/146 (30%), Gaps = 4/146 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M AI+L E ++I+ T G+ + + + + +L + + Sbjct: 1 ME-TTTAILLRKTKLTETSLIVTWFTEANGKIQTVAKGARQPKSRFAGLLDLFFDCEIQF 59 Query: 59 R-SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 SR ++ + H L + + + P EL+D+L Sbjct: 60 MRSRKSELHILREVVLRNPHEGLRLDYTRVALAAYFVELIELVTEPDHPARELHDLLMRA 119 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIG 143 K + E L + +G Sbjct: 120 FGHLNEKPASLKALLHFESELARLLG 145 >gi|323141986|ref|ZP_08076837.1| DNA repair protein RecO [Phascolarctobacterium sp. YIT 12067] gi|322413518|gb|EFY04386.1| DNA repair protein RecO [Phascolarctobacterium sp. YIT 12067] Length = 253 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 64/187 (34%), Gaps = 9/187 (4%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRL 62 DDA++L V+++ + T+++G+ + + +LQ + + + Sbjct: 11 DDALVLHVKNWQTADKYAVCFTKEHGKLRFIAYGARYEKNIHGRLLQPFANLHIEVQ--- 67 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + K + Y + +R P ELY+ML L Sbjct: 68 QGQKIDKLRSCELLQMPKSMDMQQMAYAAVASELTAVLTEDRVPQPELYEMLGAALAALM 127 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV---TQDLLWVSPKSGGAVCRSVGLPY 179 + + + LL GF LT CV G Q+ W SP GG +C S Y Sbjct: 128 QRNPRLVVLSYA-IKLLAATGFAPQLTHCVHCGEAVTAQENAWFSPLQGGLICSSCRSTY 186 Query: 180 AEKMLVL 186 L Sbjct: 187 NGDGLEP 193 >gi|313884069|ref|ZP_07817835.1| DNA repair protein RecO [Eremococcus coleocola ACS-139-V-Col8] gi|312620516|gb|EFR31939.1| DNA repair protein RecO [Eremococcus coleocola ACS-139-V-Col8] Length = 270 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 70/210 (33%), Gaps = 9/210 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNW 58 M + + I+L R Y E + +++V T ++G + ++++ + + Sbjct: 1 MNERFEGIVLFNRPYKEDDALIKVFTDRFGTKMFYLKHVKKPNHPLASQMIPLTRHEFVG 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 L+ + + + +Y + + + P L LY +L L Sbjct: 61 MIHDQGFSFLREGTSLDMYRSNQVDYKKQVYTAYISQLVDAAIDDNVPNLALYQLLRGSL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 V I +E+ LL G L+ C V Q+ S K G +C Sbjct: 121 EQINQGQVPELITHFVEIHLLPLFGTQLNWQTCQVCDSQQEPADFSIKLQGRLCPHH--- 177 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQL 208 + P + + + +L + L Sbjct: 178 ----LNHDPYRMHLNPRALHIAALLAGLSL 203 >gi|90961871|ref|YP_535787.1| DNA repair protein [Lactobacillus salivarius UCC118] gi|119361463|sp|Q1WTP7|RECO_LACS1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|90821065|gb|ABD99704.1| DNA repair protein [Lactobacillus salivarius UCC118] Length = 260 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 78/248 (31%), Gaps = 20/248 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSRLAQ 64 AI+ ++Y E+++++ + T +YG FVR + ++ + Sbjct: 10 AIVTKRKNYRERDMLVTMFTDKYGFKTFFVRGVRKRGFKLGAAILPFTHGTYIGSINSEG 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPE--REPCLELYDMLNIFLNCHK 122 + ++ + L Y + + + ++ + L+ Sbjct: 70 LSFITATKGIDQFQSINQDIILNAYATYILELVKAAFEDSIDVTNTLWFEKVLKALSLIN 129 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 I IE+ LL G + CV+ G TQ S GG +CR + Sbjct: 130 DGFDAQIIANIIEVQLLGKFGVQPNWRSCVICGETQSQFDYSESYGGILCRKHWYMDKNR 189 Query: 183 -------MLVLPSFLWKEEQTID----ADSLKSAFQLTDYFLNKYALQHNIIHCHLLREN 231 M L F + ++ K +LT + + R Sbjct: 190 LNLDQRTMYYLRKFSIVDLNYLNSIKVNADTKKKLKLT----LNEIYDNQVGIYVKARS- 244 Query: 232 FLGKLLEL 239 F+ K+ ++ Sbjct: 245 FIDKMTKV 252 >gi|325125923|gb|ADY85253.1| DNA repair protein recO protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 249 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 55/177 (31%), Gaps = 2/177 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 ++ + Y E +++ ++ T++ G + G + + + +R Sbjct: 9 HGLLFKRQQYKEADLLAKLWTKELGIVTVIAKGGMRPKSQLAAAVLPFTEGTFSILTRYK 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ L H Y E + YD+L + N Sbjct: 69 GISQLRTYKKLSQHDELFTDLDKNAYLSYLFDLADHAFSEYQKLGGYYDLLLVAFNRIVA 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 I ++L LL G L CV+ G + + S +GG VC + Sbjct: 129 GQDPEIIAQIVQLQLLDAFGVAPQLGACVICGKEKGIFDYSIAAGGVVCSDHFRSVS 185 >gi|300933268|ref|ZP_07148524.1| DNA repair protein RecO [Corynebacterium resistens DSM 45100] Length = 231 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 56/171 (32%), Gaps = 2/171 (1%) Query: 10 LGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLAQNLG 67 L GE ++IL ++TR +G+ G + + + + L V V Sbjct: 2 LRTYRLGEADLILVLLTRDHGQVRGVAKAIRKSKSRFGAKLDRFTRVNVQIYPGRGLANI 61 Query: 68 EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI 127 V + + G ++ F E L D L H+ + Sbjct: 62 TDADAVESYASPIVADPDRYFAGCAALEVAQLFGGEDSSVFSLLDATLRDLAIHEPSLPL 121 Query: 128 GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 I + L L+ G+ L C G T P +GGAVC + P Sbjct: 122 VNIVDRFVLHCLEIAGWAPSLVNCAQCGKTGPHRAFHPMAGGAVCVNCRPP 172 >gi|300214598|gb|ADJ79014.1| DNA repair protein recO (Recombination protein O) [Lactobacillus salivarius CECT 5713] Length = 260 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 78/248 (31%), Gaps = 20/248 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSRLAQ 64 AI+ ++Y E+++++ + T +YG FVR + ++ + Sbjct: 10 AIVTKRKNYRERDMLVTMFTDKYGFKTFFVRGVRKRGFKLGAAILPFTHGTYIGSINSEG 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPE--REPCLELYDMLNIFLNCHK 122 + ++ + L Y + + + ++ + L+ Sbjct: 70 LSFITATKDIDQFQSINQDIILNAYATYILELVKAAFEDSIDVTNTLWFEKVLKALSLIN 129 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 I IE+ LL G + CV+ G TQ S GG +CR + Sbjct: 130 DGFDAQIIANIIEVQLLGKFGVQPNWRSCVICGETQSQFDYSESYGGILCRKHWYMDKNR 189 Query: 183 -------MLVLPSFLWKEEQTID----ADSLKSAFQLTDYFLNKYALQHNIIHCHLLREN 231 M L F + ++ K +LT + + R Sbjct: 190 LNLDQRTMYYLRKFSIVDLNYLNSIKVNADTKKRLKLT----LNEIYDNQVGIYVKARS- 244 Query: 232 FLGKLLEL 239 F+ K+ ++ Sbjct: 245 FIDKMTKV 252 >gi|327403370|ref|YP_004344208.1| DNA repair protein recO [Fluviicola taffensis DSM 16823] gi|327318878|gb|AEA43370.1| DNA repair protein recO [Fluviicola taffensis DSM 16823] Length = 235 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 54/151 (35%), Gaps = 2/151 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M QD AI+L Y E ++I+ + T + G + + + IL + + + Sbjct: 1 MKIQDKAIVLSRSPYSESSLIVNLFTLESGLQTFLFQGARKKK-GLILFPLEIAEITYYK 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNIFLN 119 R +L + +L+ + L I L L + +L+ LN ++ Sbjct: 60 RNDSSLLKLTEMQALEPLHELVGNPLKSSIAFFISELLLICLRDNHQDKKLFHFLNEEIH 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTK 150 + + + + K GF ++ Sbjct: 120 WLNTSEELSNYLIWLLAQVSKLEGFQPEIQH 150 >gi|116514233|ref|YP_813139.1| recombinational DNA repair protein RecO [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122275035|sp|Q04A21|RECO_LACDB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|116093548|gb|ABJ58701.1| DNA replication and repair protein RecO [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 249 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 55/177 (31%), Gaps = 2/177 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 ++ + Y E +++ ++ T++ G + G + + + +R Sbjct: 9 HGLLFKRQQYKEADLLAKLWTKELGIVTVIAKGGMRPKSQLAAAVLPFTEGTFSILTRYK 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ L H Y E + YD+L + N Sbjct: 69 GISQLRTYKKLSQHDELFTDLDKNAYLSYLFDLADHAFSEYQKLGGYYDLLLVAFNRIVA 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 I ++L LL G L CV+ G + + S +GG VC + Sbjct: 129 GQDPEIIAQIVQLQLLDAFGVAPQLGACVICGKEKGIFDYSIAAGGVVCSDHFRSVS 185 >gi|227890897|ref|ZP_04008702.1| recombination protein O [Lactobacillus salivarius ATCC 11741] gi|227867306|gb|EEJ74727.1| recombination protein O [Lactobacillus salivarius ATCC 11741] Length = 260 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 78/248 (31%), Gaps = 20/248 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSRLAQ 64 AI+ ++Y E+++++ + T +YG FVR + ++ + Sbjct: 10 AIVTKRKNYRERDMLVTMFTDKYGFKTFFVRGVRKRGFKLGAAILPFTHGTYIGSINSEG 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPE--REPCLELYDMLNIFLNCHK 122 + ++ + L Y + + + ++ + L+ Sbjct: 70 LSFITATKGIDQFQSINQDIILNAYATYILELVKAAFEDSIDVTNTLWFEKVLKALSLIN 129 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 I IE+ LL G + CV+ G TQ S GG +CR + Sbjct: 130 DGFDAQIITNIIEVQLLGKFGVQPNWRSCVICGETQSQFDYSESYGGILCRKHWYMDKNR 189 Query: 183 -------MLVLPSFLWKEEQTID----ADSLKSAFQLTDYFLNKYALQHNIIHCHLLREN 231 M L F + ++ K +LT + + R Sbjct: 190 LNLDQRTMYYLRKFSIVDLNYLNSIKVNADTKKRLKLT----LNEIYDNQVGIYVKARS- 244 Query: 232 FLGKLLEL 239 F+ K+ ++ Sbjct: 245 FIDKMTKV 252 >gi|326773537|ref|ZP_08232820.1| DNA repair protein RecO [Actinomyces viscosus C505] gi|326636767|gb|EGE37670.1| DNA repair protein RecO [Actinomyces viscosus C505] Length = 249 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 70/208 (33%), Gaps = 12/208 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++D+AIIL GE + I+ ++TR +G+ + + R L+ ++ V + Sbjct: 6 YRDEAIILRTYKLGEADRIIVMLTRHHGQVRAVAKGVRRTTSRFGARLEPFSMTDVQLHA 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER-----EPCLELYDMLN 115 ++ + ++F + R + E + Y +L Sbjct: 66 GRTLDVVTQAEIIDPFGRVVSADYAMFTCASTMVETAERLSADDGDLGTEASPQQYLLLA 125 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L + ++ LL+ + G+ C + G ++GGAVC Sbjct: 126 GALAAMSHRRHAPGL--ILDSYLLRALALGGWAPSCYDCALCGAPGPHRAFHIQAGGAVC 183 Query: 173 RSVGLPYAEKMLVLPSFLWKEEQTIDAD 200 S A ++ L + D Sbjct: 184 ESCRSAGAVEVEPATMALLGALLSGDWA 211 >gi|313204665|ref|YP_004043322.1| DNA repair protein reco [Paludibacter propionicigenes WB4] gi|312443981|gb|ADQ80337.1| DNA repair protein RecO [Paludibacter propionicigenes WB4] Length = 240 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 49/152 (32%), Gaps = 5/152 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM---QPILQAGNLVRVN 57 M + IIL Y + I+ V T+Q+GR V + +LQ ++V ++ Sbjct: 1 MLSKTTGIILHSIKYTDSASIVTVYTQQFGRVSYMVHGVNKKKSMCRAALLQPLSMVEMD 60 Query: 58 -WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + + + L LF+ L + EP LY L Sbjct: 61 VFHVPGKDIQRIKDLRMNYQFTGIPFNPVKNSLALFLSEVLFKSLRQTEPDENLYLFLEN 120 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLD 147 + F + + + +GF + Sbjct: 121 SIQQLDCCEEGIANFHLVFLIKMSRYLGFAPN 152 >gi|302343330|ref|YP_003807859.1| DNA repair protein RecO [Desulfarculus baarsii DSM 2075] gi|301639943|gb|ADK85265.1| DNA repair protein RecO [Desulfarculus baarsii DSM 2075] Length = 253 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 62/158 (39%), Gaps = 6/158 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI---LQAGNLVRVNWRS 60 +D A++L +R GE +++++ R+ GR + + R + L L W S Sbjct: 6 RDHALVLRLRELGESDLLVDFFGRRIGRGTAIAKGARRSRKRFFGLLLVGHLLELELWPS 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + +LE+H A +L+G + L R +P D+ L+ Sbjct: 66 KSGDLWRLEAAWLLENHQALRADWRRWLFGAPVLELLLRATASHDPHPAALDLALRALSA 125 Query: 121 HKIPSVIGKIFVQIELMLL---KNIGFGLDLTKCVVTG 155 S + ++ + L +G+GL L CV G Sbjct: 126 CGQASDKKLLASRLLVFCLLLASELGYGLSLEHCVRCG 163 >gi|325290524|ref|YP_004266705.1| DNA replication and repair protein RecO [Syntrophobotulus glycolicus DSM 8271] gi|324965925|gb|ADY56704.1| DNA replication and repair protein RecO [Syntrophobotulus glycolicus DSM 8271] Length = 247 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 51/163 (31%), Gaps = 4/163 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 + DAI++ R YGE + +L + R+ G+ + + + + Q Sbjct: 4 YHADAIVIRTREYGEADKLLTLFAREKGKLEVIAKGARKPASKQRGGTQLFTYADF-LIY 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + ES + G L +P +++ + FL Sbjct: 63 KGKTLDLINQVHPKESFGHIWKDFDRNIAGTAMAELLDAATIREQPEPQVFVLFLSFLFL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV 163 + L++ +G+ D+ C+ G + Sbjct: 123 LEGIDPYLAQAAFSLR-LMRLLGYLPDIGACLDCGESSPEKQY 164 >gi|323144162|ref|ZP_08078798.1| DNA repair protein RecO [Succinatimonas hippei YIT 12066] gi|322416070|gb|EFY06768.1| DNA repair protein RecO [Succinatimonas hippei YIT 12066] Length = 246 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 54/148 (36%), Gaps = 4/148 (2%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRL 62 A ++ R Y E ++++E T +GR + + + +LQ ++V++ + Sbjct: 8 SPAFVIHSREYHEHSLLIEFFTLNHGRVAAIAKRVKTVRSSFKYLLQPFFPLKVSF--KQ 65 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 ++ ++V S + L+ ++ +L+ L Sbjct: 66 GKSDLWQVYDVEPSGELISFAVPEIFCASYLNELLYYLYKSKDSDPKLFASYLETLKSIS 125 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTK 150 + K + E LL ++G+G+ Sbjct: 126 EKISLDKALREFEFALLDSLGYGIRFED 153 >gi|301300989|ref|ZP_07207152.1| DNA repair protein RecO [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851405|gb|EFK79126.1| DNA repair protein RecO [Lactobacillus salivarius ACS-116-V-Col5a] Length = 220 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 58/173 (33%), Gaps = 4/173 (2%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSRLAQ 64 AI+ ++Y E+++++ + T +YG FVR + ++ + Sbjct: 10 AIVTKRKNYRERDMLVTMFTDKYGFKTFFVRGVRKRGFKLGAAILPFTHGTYIGSINSEG 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPE--REPCLELYDMLNIFLNCHK 122 + ++ + L Y + + + ++ + L+ Sbjct: 70 LSFITATKGIDQFQSINQDIILNAYATYILELVKAAFEDSIDVTNTLWFEKVLKALSLIN 129 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 I IE+ LL G + CV+ G TQ S GG +CR Sbjct: 130 DGFDAQIIANIIEVQLLGKFGVQPNWRSCVICGETQSQFDYSESYGGILCRKH 182 >gi|317472457|ref|ZP_07931780.1| DNA repair protein RecO [Anaerostipes sp. 3_2_56FAA] gi|316900075|gb|EFV22066.1| DNA repair protein RecO [Anaerostipes sp. 3_2_56FAA] Length = 246 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 56/179 (31%), Gaps = 2/179 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 + ++L + GE + + ++T++ GR F R + L + Sbjct: 4 EIKVTGLVLNAGNIGEFDKRVTLLTKERGRITAFARGAKKATSPYAAACQPLTFGEFSLY 63 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM--LNIFLN 119 ++ + + + + L + +L + Sbjct: 64 EGRSSFNLMWADVGHYFEGVKEDLLLVSYGSYFCEFASYLTRENNDEKEILKLLYLSLRA 123 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 K I E+ L+ G G+++ C G T+DL + SGG +C + Sbjct: 124 LEKKTIDPKLIRRVYEIKLMALYGQGMEVFCCTQCGSTEDLSYFDSGSGGILCSNCTKS 182 >gi|227878693|ref|ZP_03996607.1| recombination protein O [Lactobacillus crispatus JV-V01] gi|256843287|ref|ZP_05548775.1| DNA repair protein RecO [Lactobacillus crispatus 125-2-CHN] gi|256850356|ref|ZP_05555784.1| DNA repair protein recO [Lactobacillus crispatus MV-1A-US] gi|262046496|ref|ZP_06019458.1| DNA repair protein RecO [Lactobacillus crispatus MV-3A-US] gi|293380130|ref|ZP_06626217.1| DNA repair protein RecO [Lactobacillus crispatus 214-1] gi|312978178|ref|ZP_07789922.1| DNA repair protein RecO [Lactobacillus crispatus CTV-05] gi|227861708|gb|EEJ69313.1| recombination protein O [Lactobacillus crispatus JV-V01] gi|256614707|gb|EEU19908.1| DNA repair protein RecO [Lactobacillus crispatus 125-2-CHN] gi|256712753|gb|EEU27746.1| DNA repair protein recO [Lactobacillus crispatus MV-1A-US] gi|260573367|gb|EEX29925.1| DNA repair protein RecO [Lactobacillus crispatus MV-3A-US] gi|290923300|gb|EFE00216.1| DNA repair protein RecO [Lactobacillus crispatus 214-1] gi|310894896|gb|EFQ43966.1| DNA repair protein RecO [Lactobacillus crispatus CTV-05] Length = 251 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 2/185 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 II + Y E +++ ++MT+Q G V+ + + N + ++ Sbjct: 9 QGIIFKRQKYKEADLLAKIMTKQDGIMTLIVKGALRPKSRLSAATLNFSIGTYVIYTSEK 68 Query: 66 LGEFRFEVLESHC--AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + Y + E +P + YD+ L Sbjct: 69 GLSNLRTYKGARQFDGLYNDLTKNAYISFIFDLIDHAFVEYQPIGKYYDLALFALKKIDS 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I +++ +L G L CV+ G + + S K GG +C +M Sbjct: 129 GVDAEMITQIVQMKILAAYGVEPQLKHCVICGKEKGVFDYSIKMGGVICSDHFSTVTSRM 188 Query: 184 LVLPS 188 + P Sbjct: 189 HLKPK 193 >gi|54296964|ref|YP_123333.1| DNA repair protein recO [Legionella pneumophila str. Paris] gi|81601917|sp|Q5X6G0|RECO_LEGPA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|53750749|emb|CAH12156.1| DNA repair protein recO [Legionella pneumophila str. Paris] Length = 229 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 67/206 (32%), Gaps = 10/206 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A ++ + G+ + L++ TR+ G + G++ + Q +LQA + W S + Sbjct: 8 AWVIHKQWSGDTSARLKLFTRELGLINCLCKGGRTPKKQSLLQAFIPL---WVSIEERYD 64 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 + + + L GL L+ L P +L+D LN + Sbjct: 65 QYYTRNIESTSSRLDLEGHSLFSGLYINELLYYTLSPDFPDSDLFDAYLFTLNGIALARE 124 Query: 127 IGKIF---VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I + E LLK G+ TG L V V + +K Sbjct: 125 REAIEALLRRFEWALLKACGYTFSFLHEARTG----ELIVPDSHYQFVAGEGFILGGDKK 180 Query: 184 LVLPSFLWKEEQTIDADSLKSAFQLT 209 + L + + + + Sbjct: 181 IPGEHLLAIAADNLSESAYLKSAKFI 206 >gi|319792227|ref|YP_004153867.1| DNA repair protein reco [Variovorax paradoxus EPS] gi|315594690|gb|ADU35756.1| DNA repair protein RecO [Variovorax paradoxus EPS] Length = 257 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 53/154 (34%), Gaps = 11/154 (7%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSR 61 + A +L + E ++ILEV TR +GR + + S +P+L +++N+ Sbjct: 9 HEPAYVLHRYDWSESSLILEVFTRHHGRIALVAKGAKRPSSNFRPVLLPLQPLQLNY--- 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + L G L R L + L+D + Sbjct: 66 GGDAEIRTLKGAEWMGGHVMPTGEALLSGYYINELLLRLLARDDAHEALFDAYAGVVQVL 125 Query: 122 KIPSVIGKIFVQ------IELMLLKNIGFGLDLT 149 V + Q EL+LL+ +G L Sbjct: 126 AGDHVGAQAATQAAALRAFELILLREVGLLPSLD 159 >gi|313123893|ref|YP_004034152.1| DNA repair protein reco [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280456|gb|ADQ61175.1| DNA repair protein recO [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 249 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 55/177 (31%), Gaps = 2/177 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 ++ + Y E +I+ ++ T++ G + G + + +R Sbjct: 9 HGLLFKRQQYKEADILAKLWTKELGIVTVIAKGGMRPKSQLAAAVLPFTEGTFGILTRYK 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + ++ L H Y E + YD+L + N Sbjct: 69 GISQLWTYKKLSQHDELFTDLDKNAYLSYLFDLADHAFSEYQKLGGYYDLLLVAFNRIVA 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 I ++L LL G L CV+ G + + S +GG VC + Sbjct: 129 GQDPEIIAQIVQLQLLDAFGVAPQLGACVICGKEKGIFDYSIAAGGVVCSDHFRSVS 185 >gi|268611991|ref|ZP_06145718.1| DNA replication and repair protein RecO [Ruminococcus flavefaciens FD-1] Length = 255 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 52/167 (31%), Gaps = 4/167 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRLA 63 + I+L RS GE++ ++++TR G V+ + + Q R R Sbjct: 13 EGIVLRERSVGEQDKFIDILTRDRGVLEASVKGARKINGKSGSSSQLFAYSRFCLDQRR- 71 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH-K 122 L E L S + L + ++ + L+ K Sbjct: 72 NMLYLNSAEPLHIFYGLRDSLTKISLASYFSEVLRFCVIPEAQNNDILRLTLNCLHYLEK 131 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 + EL L+ IGF D+ C G + + G Sbjct: 132 NERSEEFLKAVFELRLMSEIGFMPDIVACRECGTFEPEEIFFSITDG 178 >gi|94502129|ref|ZP_01308630.1| DNA repair protein RecO [Oceanobacter sp. RED65] gi|94425731|gb|EAT10738.1| DNA repair protein RecO [Oceanobacter sp. RED65] Length = 244 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 67/236 (28%), Gaps = 12/236 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS-HRMQPILQAGNLVRVNWRSR 61 + A +L R Y E + +++ T YG R + ++ Q LQ L + + Sbjct: 2 IKQRAYLLHSRPYKETSALVDFFTPDYGHIRCMARGVKKANKYQQPLQPFTLYTIFFHGD 61 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPE--REPCLELYDMLNIFLN 119 + LS + G L R L L+D L Sbjct: 62 SGLKN---LDKFEIFSLPLNLSGNPLFSGFYINEVLLRALRSDAEVESQSLFDAYEDVLA 118 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + EL LL+++G + T D V Y Sbjct: 119 SLN-SEGLELSLRLFELSLLEHMGQQYEWALDFRTESMVDDNAFYGFFVEQGMARVSQKY 177 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKS--AFQLTDYFLNKYALQHNIIHCHL-LRENF 232 A F E + + L ++ + AL+ I + + RE Sbjct: 178 ANSNPN-AVFRGNELKALSHGELLDQNVLKMCKRLF-RLALRPIIGYKPIQARELL 231 >gi|259046830|ref|ZP_05737231.1| DNA repair protein RecO [Granulicatella adiacens ATCC 49175] gi|259036453|gb|EEW37708.1| DNA repair protein RecO [Granulicatella adiacens ATCC 49175] Length = 260 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 70/172 (40%), Gaps = 2/172 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 D I++ ++Y EK+++++++TR +G+ + F+RN Q R + + QN Sbjct: 8 DGIVIMRQTYREKDMLVKILTRDHGKLMFFLRNAQQSNHPLTAATQVFTRATFLGHIHQN 67 Query: 66 LGEFRFEVLESHCAKL-LSSSLFLYGLQSIVPLFRFLPEREP-CLELYDMLNIFLNCHKI 123 F + + A + L L + L + + ++ +L + Sbjct: 68 GFSFLKDSHDIKPATIVLQDVKAQAVLAYLTQLTDAVMDDHIVNKTVFQLLWDSIEAINN 127 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 I E+ +L+ G ++ CV+ DL+ S + G +C++ Sbjct: 128 GIDAEVILRFFEIKILRYFGVEVEWQHCVICNRDTDLVDFSIQKHGCLCKNH 179 >gi|260910951|ref|ZP_05917592.1| recombination protein O [Prevotella sp. oral taxon 472 str. F0295] gi|260634942|gb|EEX52991.1| recombination protein O [Prevotella sp. oral taxon 472 str. F0295] Length = 242 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 52/158 (32%), Gaps = 5/158 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + AI+L YG+ +I +++T +GR ++ + + + Q L+ + Sbjct: 1 MLVKTHAIVLRSLKYGDSQLITDLLTEAFGRVSFVSSIPRTQKAKIKKQLFQPLTLLEIE 60 Query: 58 WRSRLA-QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R + + + S + L L + + + LY + Sbjct: 61 FDHRPNARLQRLRDARMTYPFTSIPYSEAKLAIALFVAEFLSHATRDEQQNVSLYKYVET 120 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVV 153 + F + L + +GF +L Sbjct: 121 SVRWLDGAQHAFANFHLAFMIRLSRFLGFYPNLDDYTR 158 >gi|317132161|ref|YP_004091475.1| DNA repair protein RecO [Ethanoligenens harbinense YUAN-3] gi|315470140|gb|ADU26744.1| DNA repair protein RecO [Ethanoligenens harbinense YUAN-3] Length = 265 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 45/156 (28%), Gaps = 2/156 (1%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SRLA 63 D +++ + GE + L ++TR+YG R + + L ++ + Sbjct: 17 TDGLVIRDYNVGEADRFLTLLTRKYGAIRASARGARRIKSGVSTGTQLLCHADFTLFKGR 76 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK- 122 + L P+ E ++ L + Sbjct: 77 EKYIIDEATPLTLFMGIRAELEKLALAQYFCELEDFLAPKEEEAELFLRLILNALALLEA 136 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 +I E+ LL G+ DL C G + Sbjct: 137 GKHPSMQIKAAFEMRLLAISGYMPDLVACAGCGTYE 172 >gi|325068603|ref|ZP_08127276.1| DNA replication and repair protein RecO [Actinomyces oris K20] Length = 249 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 70/208 (33%), Gaps = 12/208 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++D+AIIL GE + I+ ++TR +G+ + + R L+ ++ V + Sbjct: 6 YRDEAIILRTYKLGEADRIIVMLTRHHGQVRAVAKGVRRTTSRFGARLEPFSMTDVQLHA 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER-----EPCLELYDMLN 115 ++ + ++F + R + E + Y +L Sbjct: 66 GRTLDVVTQAEIIDPFGRVVSADYAMFTCASTMVETAERLSADDGDLGTEASPQQYLLLA 125 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 L + ++ LL+ + G+ C + G ++GGAVC Sbjct: 126 GALAAMSHRRHAPGL--ILDSYLLRALALGGWAPSCYDCALCGAPGPHRAFHIQAGGAVC 183 Query: 173 RSVGLPYAEKMLVLPSFLWKEEQTIDAD 200 S A ++ L + D Sbjct: 184 ESCRSAGAVEVEPSTMALLGALLSGDWA 211 >gi|329954163|ref|ZP_08295258.1| DNA repair protein RecO [Bacteroides clarus YIT 12056] gi|328528140|gb|EGF55120.1| DNA repair protein RecO [Bacteroides clarus YIT 12056] Length = 242 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 52/163 (31%), Gaps = 5/163 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L Y + +II+++ T GR V +S + + Q +LV + Sbjct: 1 MLQKTQGIVLHSLKYKDTSIIVDIYTEVSGRASFLVPVSRSRKAAVKSVLFQPLSLVELE 60 Query: 58 WRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R + + + + L + L L+R L E L+ L Sbjct: 61 ADFRPNTTIYKVKEAKSLYPFTSIPYDPYKSAIALFLSEFLYRALREEAENRPLFAYLQH 120 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 + S + + L + +G +L Sbjct: 121 SIVWLDECGSGFANFHLVFLMRLSRFLGLYPNLEDYHSGDYFD 163 >gi|309388939|gb|ADO76819.1| DNA repair protein RecO [Halanaerobium praevalens DSM 2228] Length = 256 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 32/244 (13%), Positives = 73/244 (29%), Gaps = 21/244 (8%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS-HRMQPILQAGNLVRVNWRSR 61 ++ +A++L GE + ++ + T++ G+ + + + + L + Sbjct: 4 FETEALVLKQFDLGEADRLITLYTKEKGKLKAVAKGARKGKKTRSGLVLPFSYHNFTLYQ 63 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 E + + Y + R E E L+ +L I L Sbjct: 64 GRSLAKINHIESIAMNSKLRDDLDYMAYASVVSEYIERSGLEAEADQALFSLLAIILEKM 123 Query: 122 KIPSVIG--KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 FV + LL +G ++ C V G +L +P S + Sbjct: 124 AQAKKNELLFNFVIFKAKLLLLLGVKPEIENCTVCGKKVNLKKGAPLSVEEGGTICKNCF 183 Query: 180 AEKMLVLPSFL-----------------WKEEQTIDADSLKSAFQLTDYFLNKYA-LQHN 221 + + ++ +L+ ++T+ FL + L+ Sbjct: 184 NQNEYYKSTVFSLSEMRVLYKIIFAEISQLKKARFSDQTLEKINKITEKFLVYHLELEPK 243 Query: 222 IIHC 225 + Sbjct: 244 SLSF 247 >gi|256545609|ref|ZP_05472967.1| DNA repair protein RecO (recombination protein O) [Anaerococcus vaginalis ATCC 51170] gi|256398686|gb|EEU12305.1| DNA repair protein RecO (recombination protein O) [Anaerococcus vaginalis ATCC 51170] Length = 252 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 67/185 (36%), Gaps = 8/185 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SRLAQ 64 + +L SY E + I+E+ T+ G+ + + + + V+ ++ + + Sbjct: 10 EGFVLREFSYRESSKIIEIFTKDMGKISVIAKGVLNKKNSNLSSTQRFVKASYNLYKSGE 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 R L +K + + +I L + + +Y++L+ + + Sbjct: 70 KFFGIRDASLLKSYSKSNKNFDIIIYKSAICDLLLKTIDYDQKDLVYNLLDKTFDSFEKA 129 Query: 125 SVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQD--LLWVSPKSGGAVCRSVGLPY 179 LLK I GF +L +C + G + + S K GG VC S Sbjct: 130 --SENYLNIFLCFLLKYISFSGFKPNLKECSLCGSKINPSDAYFSIKDGGIVCSSCKKIK 187 Query: 180 AEKML 184 + + Sbjct: 188 KDIVY 192 >gi|212702602|ref|ZP_03310730.1| hypothetical protein DESPIG_00628 [Desulfovibrio piger ATCC 29098] gi|212674043|gb|EEB34526.1| hypothetical protein DESPIG_00628 [Desulfovibrio piger ATCC 29098] Length = 250 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 54/159 (33%), Gaps = 4/159 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M W D A++L + ++ E +I L+++ R++G F G R + L N ++ Sbjct: 1 MEWTDQALVLRMGAFRESDIWLKLLCREHGLLTLFAFGGSRSRRRFCGCLDVLNSLQCRV 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDMLNIF 117 RS L L + + + + + E + ++ Sbjct: 61 RSSKDGRFLNLEEAALLQGPRLLRRNWQRMGLAANCLRFVEAMGVGEDAAPEAFLLVEDL 120 Query: 118 LNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTG 155 + + L L +GF +L +C G Sbjct: 121 RAVLEAEKAPPVLLPLYFRLRLAGALGFAPNLGQCGRCG 159 >gi|306820782|ref|ZP_07454407.1| recombination protein O [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551172|gb|EFM39138.1| recombination protein O [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 259 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 79/233 (33%), Gaps = 8/233 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + +AII+ + Y E + I+ T+++G+ F + + + + V+ Sbjct: 1 MNVETEAIIIKTQKYKEFDEIVTAFTKKFGKINMFAHSSKKVKSPLLSGTQLFGHVDMEI 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE-PCLELYDMLNIFLN 119 L ++ ++ K Y + + + + L+ N Sbjct: 61 DLRESSSRLFSSKIKKSYYKFSEDLHKYYLASYLCEMIEKTQQENITDIRLFKTTLEIFN 120 Query: 120 CHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLL-WVSPKSGGAVCRSVGL 177 + K+ EL+LL+N+G L C+ + S G+V + Sbjct: 121 YIENTKGKLKLIRLVFELILLRNLGVSPQLDCCIFCDTDDTEILRYIDISQGSVVCDNCV 180 Query: 178 PYAEKM--LVLPSFLWKEEQTIDADSLKSAF--QLTDYFLNK-YALQHNIIHC 225 + + L + + + ++ L + ++ D L + N I+ Sbjct: 181 KKSMISHPYRMDRNLIRFMKYVYSNDLSNVLEVKIADILLEQLDVFIQNYINY 233 >gi|326381619|ref|ZP_08203313.1| DNA repair protein RecO [Gordonia neofelifaecis NRRL B-59395] gi|326199866|gb|EGD57046.1| DNA repair protein RecO [Gordonia neofelifaecis NRRL B-59395] Length = 273 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 22/171 (12%), Positives = 52/171 (30%), Gaps = 6/171 (3%) Query: 10 LGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLAQNLG 67 L GE + I+ +T ++G + + + L+ V V++ Sbjct: 2 LRQHKLGEADRIITFLTAEHGLVRAVAKGVRRTRSKFGARLEPFAHVDVHFYP-GRNLDV 60 Query: 68 EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI 127 + + L + +++ +++ L E + + Sbjct: 61 ITQVDSLHAFSDDIVADYGRYTTACAVLETAERLAGEERAPAQHLHRLTVGALAALAEDR 120 Query: 128 GKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + ++ LL+ + G+ L+ C +GGAVC Sbjct: 121 RDRQLILDAFLLRAMSSAGWMPALSVCARCAQPGPHRAFHVAAGGAVCIHC 171 >gi|300173397|ref|YP_003772563.1| DNA repair protein RecO [Leuconostoc gasicomitatum LMG 18811] gi|299887776|emb|CBL91744.1| DNA repair protein RecO [Leuconostoc gasicomitatum LMG 18811] Length = 263 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 69/237 (29%), Gaps = 17/237 (7%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS---RL 62 I+L R Y + ++++ ++T G R + + V + + Sbjct: 5 KGIVLYTRQYKDNDLLVRMLTETRGLRTFLARGAKKQKSHLSAAMQPYTVVTFEGAFAKR 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER-EPCLELYDMLNIFLNCH 121 LG ++ +L+ I L E E Y+ L + L Sbjct: 65 TVGLGYINDIQQATYHRRLVDDIEANAYAALIASLIDETFEEGEVITRWYNQLLLALLKL 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I E+ LL +G + ++G T S K G + + Sbjct: 125 DEGLDPQIIANIFEIQLLVPLGVAPNWRADPISGQTTGRFDYSEKYNGIIAENHYELDEH 184 Query: 182 KMLVLPS--FLWKEEQTIDADSLKS---------AFQLTDYFL-NKYA-LQHNIIHC 225 ++++ F ++ ID + Q ++ + L+ Sbjct: 185 RLMIDQKTMFYLRQFSVIDLRQIHQIKISTTTKRGLQRVIDYIYDNQLGLKPRAKKF 241 >gi|224536621|ref|ZP_03677160.1| hypothetical protein BACCELL_01496 [Bacteroides cellulosilyticus DSM 14838] gi|224521712|gb|EEF90817.1| hypothetical protein BACCELL_01496 [Bacteroides cellulosilyticus DSM 14838] Length = 244 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 24/169 (14%), Positives = 50/169 (29%), Gaps = 5/169 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L Y + ++I ++ T GR V+ +S + + Q LV + Sbjct: 1 MLQKTLGIVLHTLKYNDTSLIADIYTETAGRASFIVKIPRSRKAAVKSVLFQPLALVELE 60 Query: 58 WRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R ++ + + + L L+R + E L+ L Sbjct: 61 ADFRSNASMYKITEAKSYYPFSSIPYDPYKSSIALFLAEFLYRAVREEAENRPLFAYLQH 120 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVS 164 + + + L + +G +L L Sbjct: 121 SIIWLDECRDSFANFHLVFLMRLSRFLGLYPNLEDYENGDYFDLLNACF 169 >gi|254421751|ref|ZP_05035469.1| DNA repair protein RecO [Synechococcus sp. PCC 7335] gi|196189240|gb|EDX84204.1| DNA repair protein RecO [Synechococcus sp. PCC 7335] Length = 368 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 81/251 (32%), Gaps = 12/251 (4%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN-WRS 60 ++ I L GE + ++ V+T++YG + H+ + ++G V Sbjct: 5 NYKATGINLKGMPMGEADRLVTVLTKEYGLVRAIAPGARKHKSKLAGRSGLFVVNEVLFV 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + E + S + +P ELY +L L Sbjct: 65 KGKSLDKLVQAETVRSFPGLSKDLAKLTASQYLAEIALALALSEQPQAELYYLLIEHLGR 124 Query: 121 HKIPSVIGKIFVQIE--LMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVCRSVG 176 + + + LL G ++ +C ++ DL + +VC Sbjct: 125 IESAPTAHVLACLAQATFHLLALAGVAPEVHRCCLSRSPLAIDLSNPDWRVAFSVCSGGA 184 Query: 177 LPYAEKMLVLPSFLWKEEQTID--ADSLKSAFQLTDYFLNK---YALQHNIIHCHLLREN 231 + E + +L + +Q ID D +A + +Y ++ A + + + Sbjct: 185 VALEEVERLENEYLQEVKQQIDSQKDDWIAAEETAEYSISSSYPRASKPSNTDAPASKRT 244 Query: 232 FL--GKLLELI 240 +L I Sbjct: 245 LTMSSRLRRQI 255 >gi|37519653|ref|NP_923030.1| DNA repair protein RecO [Gloeobacter violaceus PCC 7421] gi|62287453|sp|Q7NPH1|RECO_GLOVI RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|35210644|dbj|BAC88025.1| gll0084 [Gloeobacter violaceus PCC 7421] Length = 261 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 50/156 (32%), Gaps = 3/156 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SR 61 ++ I L GE ++++ ++TR+ G R + + + V + + R Sbjct: 6 YRATGINLRRMPLGESDLLMTILTRENGLVRAVARGARKANARIGGRTEQFVVNDLQLYR 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + E L + L + + E + +LYD+L + L Sbjct: 66 GRSLDQLTQAESLRTFPGLLQDLGRLTAAQYLAEGVLQEATEGQAQEDLYDLLLVHLERL 125 Query: 122 KIPSVIGKIFVQIE--LMLLKNIGFGLDLTKCVVTG 155 + LL G ++ C V+ Sbjct: 126 AATPSHQIAARLVHGVYQLLAVGGVAPEVHFCTVSH 161 >gi|325686030|gb|EGD28088.1| DNA repair protein RecO [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 249 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 54/177 (30%), Gaps = 2/177 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 ++ + Y E +I+ ++ T++ G + G + + +R Sbjct: 9 HGLLFKRQQYKEADILAKLWTKELGIVTVIAKGGMRPKSQLAAAVLPFTEGTFGILTRYK 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + ++ L H Y E + YD+L + N Sbjct: 69 GISQLWTYKKLSQHDELFTDLDKNAYLSYLFDLADHAFSEYQKLGGYYDLLLVAFNRIVA 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 I ++L LL G L CV+ G + + S +GG VC Sbjct: 129 GQDPEIIAQIVQLQLLDAFGVAPQLGACVICGKEKGIFDYSIAAGGVVCSDHFRSVN 185 >gi|302874335|ref|YP_003842968.1| DNA repair protein RecO [Clostridium cellulovorans 743B] gi|307689398|ref|ZP_07631844.1| DNA repair protein RecO [Clostridium cellulovorans 743B] gi|302577192|gb|ADL51204.1| DNA repair protein RecO [Clostridium cellulovorans 743B] Length = 235 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 61/197 (30%), Gaps = 3/197 (1%) Query: 10 LGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SRLAQNLGE 68 L + E + ++ V T +G+ V+ + + + + Sbjct: 2 LKAQDIKESDKLVTVFTEDFGKMNILVKGANRAKSAMLPLTLQFCFCDLVLFKGKSMYTI 61 Query: 69 FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP-SVI 127 V+ES L YG I + L E E ++ L K S + Sbjct: 62 NEGNVIESFQNFLEDIDSLAYGSYLIELIDISLSEGEVNQYIFRELITCYYIMKNRASSM 121 Query: 128 GKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLWVSPKSGGAVCRSVGLPYAEKMLVL 186 I V + LL G G+ L +C V + + ++ G +C S + Sbjct: 122 EAIVVYFQCKLLYYTGHGITLDRCSVCKSKIISSNYFNFQTIGGICNSCEKKNGISVSYE 181 Query: 187 PSFLWKEEQTIDADSLK 203 L K I + + Sbjct: 182 AYSLLKYIMKIKLEDIA 198 >gi|260583652|ref|ZP_05851400.1| DNA repair protein RecO [Granulicatella elegans ATCC 700633] gi|260158278|gb|EEW93346.1| DNA repair protein RecO [Granulicatella elegans ATCC 700633] Length = 267 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 70/185 (37%), Gaps = 2/185 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 I+L + Y E ++I+++ +R++G+ + FVRN Q R + + QN Sbjct: 8 TGIVLFRQEYKEHDMIVKIFSREFGKQMFFVRNLQRSSHPLSAATLPFTRAVFIGTIHQN 67 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREP--CLELYDMLNIFLNCHKI 123 F E LE + + + + + + + + ELYD+L + + Sbjct: 68 GFSFIRECLEVQNHRRIYEQIEVQAVMTYMMQLVDAVMEDRIVNTELYDLLENCIRAVEN 127 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + EL +LK G +C + +S K G +C +++ Sbjct: 128 DLDPFILMHYFELKMLKYFGVAFQWQQCCFCEESVGPFDISLKHHGLLCSRHYDKDEKRL 187 Query: 184 LVLPS 188 + P Sbjct: 188 QLSPK 192 >gi|104774143|ref|YP_619123.1| DNA repair protein RecO (recombination protein O) [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|300812203|ref|ZP_07092645.1| DNA repair protein RecO [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|119361462|sp|Q1G9W7|RECO_LACDA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|103423224|emb|CAI98052.1| DNA repair protein RecO (Recombination protein O) [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|300496839|gb|EFK31919.1| DNA repair protein RecO [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 249 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 54/177 (30%), Gaps = 2/177 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 ++ + Y E +++ ++ T++ G + G + + +R Sbjct: 9 HGLLFKRQQYKEADLLAKLWTKELGIVTVIAKGGMRPKSQLAAAVLPFTEGTFGILTRYK 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ L H Y E + YD+L + N Sbjct: 69 GISQLRTYKKLSQHDELFTDLDKNAYLSYLFDLADHAFSEYQKLGGYYDLLLVAFNRIVA 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 I ++L LL G L CV+ G + + S +GG VC + Sbjct: 129 GQDPEIIAQIVQLQLLDAFGVAPQLGACVICGKEKGIFDYSIAAGGVVCSDHFRSVS 185 >gi|256820982|ref|YP_003142261.1| DNA repair protein RecO [Capnocytophaga ochracea DSM 7271] gi|256582565|gb|ACU93700.1| DNA repair protein RecO [Capnocytophaga ochracea DSM 7271] Length = 238 Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 50/155 (32%), Gaps = 5/155 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP----ILQAGNLVRV 56 MY + AI++ Y + ++I++ T+ G ++ + + + Q L+ + Sbjct: 1 MYDKVRAIVISSLKYSDNSLIVKCFTQTMGTRSYLLQGVLAQKKGNLKTALFQPFMLLEL 60 Query: 57 NWRSRLAQNLGEFRFEVLE-SHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + LG + + + + + P E++ L Sbjct: 61 VATHKNNGTLGRVKEAKIAVPYYSLHTDMYKSAVSMFLSEVCAFVCTSEAPDEEMFLFLE 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTK 150 L ++ L + + +GF D T Sbjct: 121 QKLLFFDRNDFSANFHLKFLLDITRYLGFYPDTTH 155 >gi|238854657|ref|ZP_04644987.1| DNA repair protein RecO [Lactobacillus jensenii 269-3] gi|260664400|ref|ZP_05865252.1| DNA repair protein RecO [Lactobacillus jensenii SJ-7A-US] gi|282932952|ref|ZP_06338349.1| DNA repair protein RecO [Lactobacillus jensenii 208-1] gi|313472196|ref|ZP_07812688.1| DNA repair protein RecO [Lactobacillus jensenii 1153] gi|238832447|gb|EEQ24754.1| DNA repair protein RecO [Lactobacillus jensenii 269-3] gi|239529576|gb|EEQ68577.1| DNA repair protein RecO [Lactobacillus jensenii 1153] gi|260561465|gb|EEX27437.1| DNA repair protein RecO [Lactobacillus jensenii SJ-7A-US] gi|281302987|gb|EFA95192.1| DNA repair protein RecO [Lactobacillus jensenii 208-1] Length = 251 Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 61/184 (33%), Gaps = 2/184 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLA 63 I+ + Y E +++ +++++ G VR + + + A + + + Sbjct: 9 TGIVFKRQRYKEADVLAKIISKDMGIFTMLVRGALRPKSKLSASVLAFSFGKYQVLTSQK 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ ++ +L Y L E + Y ++ + L+ Sbjct: 69 GLSTLKTYKDVKQFTNLYSDLTLNSYACYLCDLLDHAFIEYQSLGNFYKLILVALDKLNA 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I +EL +L G L +C + G T S +GG +C+ A Sbjct: 129 GVDPEIICQLVELQMLAVYGVRPQLKQCAICGETHGPFDYSISAGGIICQKHFNQIARMH 188 Query: 184 LVLP 187 L Sbjct: 189 LNDK 192 >gi|302344974|ref|YP_003813327.1| DNA repair protein RecO [Prevotella melaninogenica ATCC 25845] gi|302149782|gb|ADK96044.1| DNA repair protein RecO [Prevotella melaninogenica ATCC 25845] Length = 241 Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 50/156 (32%), Gaps = 5/156 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRN---GQSHRMQPILQAGNLVRVN 57 M + AI+L +G+ +I+++ T GR R + + Q L+ + Sbjct: 1 MILKSKAIVLRSLKFGDSLLIIDMFTELEGRISFITRIPKTAKGKIKKQYFQPLTLLDLE 60 Query: 58 WRSRLAQNLGEFRFEVL-ESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R +L + + + + L L+ + LY+ + Sbjct: 61 FDYRPRTSLQRIKEVRILRPYGSIPFDPVKSAILLFLSEFLYYVTRGEQQNAHLYNYICA 120 Query: 117 FLNCHKI-PSVIGKIFVQIELMLLKNIGFGLDLTKC 151 + + + L + IGF +L Sbjct: 121 SMEWLDEAEHDYANFHLVFMMRLSRFIGFFPNLDAY 156 >gi|73662499|ref|YP_301280.1| recombination protein O [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|92087035|sp|Q49Y09|RECO_STAS1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|72495014|dbj|BAE18335.1| putative recombination protein O [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 251 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 61/184 (33%), Gaps = 3/184 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-R 59 M + II+ YGE + I+ ++ + VR + + V + Sbjct: 1 MLIKQKGIIIKTIDYGESDKIITILNEYGAKVPLMVRRAKKSKSGLQANTQLFVYGLFIY 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 S+ +V++ + L Y + R + Y++L+ L+ Sbjct: 61 SKWKGMGTLSSVDVIDQNYHLRLDIYESSYASLCTETIDRSMETDGISKNSYELLHFVLD 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD--LLWVSPKSGGAVCRSVGL 177 + + V + L + GF +CV+T L+ S K GA+ +V Sbjct: 121 KIRQGISAQLMSVVVLLKCMTKFGFNAVFDRCVITQSEDQSKLVGYSFKYDGAISENVAY 180 Query: 178 PYAE 181 Sbjct: 181 KDTH 184 >gi|49483814|ref|YP_041038.1| recombination protein O [Staphylococcus aureus subsp. aureus MRSA252] gi|257425691|ref|ZP_05602115.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus 55/2053] gi|257428352|ref|ZP_05604750.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus 65-1322] gi|257430989|ref|ZP_05607369.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus 68-397] gi|257433677|ref|ZP_05610035.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus E1410] gi|257436591|ref|ZP_05612635.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus M876] gi|282904148|ref|ZP_06312036.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus C160] gi|282905975|ref|ZP_06313830.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus Btn1260] gi|282908885|ref|ZP_06316703.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus WW2703/97] gi|282914373|ref|ZP_06322159.1| DNA repair protein RecO family protein [Staphylococcus aureus subsp. aureus M899] gi|282919342|ref|ZP_06327077.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus C427] gi|282924667|ref|ZP_06332335.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus C101] gi|283958330|ref|ZP_06375781.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus A017934/97] gi|293503447|ref|ZP_06667294.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus 58-424] gi|293510464|ref|ZP_06669170.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus M809] gi|293531004|ref|ZP_06671686.1| DNA repair protein RecO family protein [Staphylococcus aureus subsp. aureus M1015] gi|295428144|ref|ZP_06820776.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus EMRSA16] gi|56749561|sp|Q6GGD4|RECO_STAAR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|49241943|emb|CAG40638.1| putative recombination protein O [Staphylococcus aureus subsp. aureus MRSA252] gi|257271385|gb|EEV03531.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus 55/2053] gi|257275193|gb|EEV06680.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus 65-1322] gi|257278419|gb|EEV09055.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus 68-397] gi|257281770|gb|EEV11907.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus E1410] gi|257283942|gb|EEV14065.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus M876] gi|282313502|gb|EFB43897.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus C101] gi|282317152|gb|EFB47526.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus C427] gi|282321554|gb|EFB51879.1| DNA repair protein RecO family protein [Staphylococcus aureus subsp. aureus M899] gi|282327149|gb|EFB57444.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331267|gb|EFB60781.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus Btn1260] gi|282595766|gb|EFC00730.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus C160] gi|283790479|gb|EFC29296.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus A017934/97] gi|290920272|gb|EFD97338.1| DNA repair protein RecO family protein [Staphylococcus aureus subsp. aureus M1015] gi|291095113|gb|EFE25378.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus 58-424] gi|291466828|gb|EFF09348.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus M809] gi|295128502|gb|EFG58136.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus EMRSA16] Length = 250 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 64/184 (34%), Gaps = 3/184 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + II+ YGE + I+ ++ + R + + Q V + Sbjct: 1 MLMRQKGIIIKAVDYGESDKIITILNEHGAKVPLMARRAKKVKTGLQAQTQLFVYGLFIY 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +G +V+ H + + Y + + R + E + Y +L L Sbjct: 61 NKWRGMGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDEGDVAPYNYQLLQFVLE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVCRSVGL 177 + + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 121 KIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKYDGAISRQEAS 180 Query: 178 PYAE 181 Sbjct: 181 KDVH 184 >gi|307566036|ref|ZP_07628494.1| DNA repair protein RecO [Prevotella amnii CRIS 21A-A] gi|307345224|gb|EFN90603.1| DNA repair protein RecO [Prevotella amnii CRIS 21A-A] Length = 241 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 59/155 (38%), Gaps = 5/155 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + AI+L YG+ ++I++++T + GR V+ ++ + + Q L+ + Sbjct: 1 MLRKSKAIVLHTIKYGDSSLIIDLLTEEEGRLTFIVKLSKTMKGKMKKQYFQPMTLLDIE 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSI-VPLFRFLPEREPCLELYDMLNI 116 + R N+ + ++ + + + L I L + L+ + Sbjct: 61 FDFRPNANMQHIKDIRIDIPFTTIPFNPIKTSILLFISEFLLYATRSEQYNKTLFQFVKK 120 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTK 150 + F L L K IGF +L+K Sbjct: 121 SIEWLDASVSNFANFHITFMLHLSKFIGFFPNLSK 155 >gi|21674907|ref|NP_662972.1| recombination/replication protein RecO, putative [Chlorobium tepidum TLS] gi|21648134|gb|AAM73314.1| recombination/replication protein RecO, putative [Chlorobium tepidum TLS] Length = 253 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 58/151 (38%), Gaps = 4/151 (2%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRLAQNL 66 +L Y +++ I ++TR+YG+ ++ G+S + + P+ GN++ + +++ Sbjct: 2 VLRDIKYRDQSKICLLLTREYGQVSVILKGGRSAKSRIGPLFSPGNVIDAVLYKKGNRDI 61 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNCHKI-P 124 L L ++ L R+ E + L+ + + + Sbjct: 62 QFLSDASLVLSPLSESPDLDRFGVLYRVLDLIRYASTHEEKNVPLFTITHSAIWRLCHAE 121 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 I L L+ +GF L +CV + Sbjct: 122 RNFQTILAWFLLRLVGVLGFAPSLDRCVFSN 152 >gi|319935429|ref|ZP_08009866.1| hypothetical protein HMPREF9488_00697 [Coprobacillus sp. 29_1] gi|319809645|gb|EFW06058.1| hypothetical protein HMPREF9488_00697 [Coprobacillus sp. 29_1] Length = 245 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 60/155 (38%), Gaps = 3/155 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRLA 63 + IIL Y E ++IL + T++YG+ R + + Q + ++ + Sbjct: 11 EGIILKKTVYKENDMILHIYTKEYGKIGIIARGIRKITSKNARACQEMMISEMSINLK-K 69 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + ++ + + + +R+L + P + YD+L L Sbjct: 70 GLSSLMKATPVDYLRHIKENLDSEIVANYVLEYFYRYLEDNNPNQDEYDILYHSLKALDH 129 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 +++ + +L + G +D+ CVV G ++ Sbjct: 130 GYSPLLVYLLFNVFVLNHNGVSIDVEGCVVCGSSK 164 >gi|291533047|emb|CBL06160.1| DNA repair protein RecO [Megamonas hypermegale ART12/1] Length = 246 Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 73/232 (31%), Gaps = 15/232 (6%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 + + ++LGV+++G + I+ +++ YG+ + + +Q + + + Sbjct: 3 IYTTEVLVLGVKNWGNADKIVTLLSPTYGKITAAAYGCRRPKSPLAASMQPFSWLDIQL- 61 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 S+ + + E + Y E EP E+Y+ L L Sbjct: 62 SKGEKMDTVRQCEHKGFFSDLYEDLTAMAYASFIAELAKELCSEDEPQAEIYEKLLKILP 121 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRSVGLP 178 C + + + G L ++C + G + GGA+C S Sbjct: 122 CLTKFNPRICALA-SAYQIFEYTGCQLHYSQCALCGSKIEGDCHFDAMQGGAICTSCNQG 180 Query: 179 YAEKMLVLPSFLWKEEQTIDAD----------SLKSAFQLTDYFLNKYALQH 220 + +D D L +A ++ ++ + Sbjct: 181 KQINYSASVRLFIEHLLYLDWDNPPKFQVKGIDLINAEKILLDYIQSLIGKP 232 >gi|218132941|ref|ZP_03461745.1| hypothetical protein BACPEC_00802 [Bacteroides pectinophilus ATCC 43243] gi|217991814|gb|EEC57818.1| hypothetical protein BACPEC_00802 [Bacteroides pectinophilus ATCC 43243] Length = 258 Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 24/182 (13%), Positives = 60/182 (32%), Gaps = 2/182 (1%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 ++L GE + + ++T++ G+ F + + + + + Sbjct: 9 GMVLSSMPVGEFDRRIVLLTKERGKIAAFAKGARRMNSPLMGVTQPFAFGKFELYEGRTS 68 Query: 67 GEFRFEVLESHCAKL-LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH-KIP 124 + R + ++ ++ Y + E ++ ++L + L Sbjct: 69 YDIRRADISNYFTEVSSDLDAICYACYFAELADYYGRENLDASQILNLLYMTLRALANDN 128 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 I E+ L+ G ++ +C ++ L + S G VC S A + L Sbjct: 129 IPDELIRYIYEIKLISINGECPNMFECAECRKSEGLHYFSMSRFGIVCDSCVRNTAGECL 188 Query: 185 VL 186 + Sbjct: 189 EI 190 >gi|57651959|ref|YP_186463.1| RecO family DNA repair protein [Staphylococcus aureus subsp. aureus COL] gi|87162406|ref|YP_494221.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|151221681|ref|YP_001332503.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus str. Newman] gi|161509794|ref|YP_001575453.1| recombination protein RecO [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140014|ref|ZP_03564507.1| recombination protein RecO [Staphylococcus aureus subsp. aureus str. JKD6009] gi|258450605|ref|ZP_05698667.1| RecO family DNA repair protein [Staphylococcus aureus A5948] gi|262049141|ref|ZP_06022018.1| hypothetical protein SAD30_0298 [Staphylococcus aureus D30] gi|262051226|ref|ZP_06023450.1| hypothetical protein SA930_1657 [Staphylococcus aureus 930918-3] gi|282920115|ref|ZP_06327840.1| DNA repair protein RecO [Staphylococcus aureus A9765] gi|294848597|ref|ZP_06789343.1| DNA repair protein RecO [Staphylococcus aureus A9754] gi|62287350|sp|Q5HFJ4|RECO_STAAC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361487|sp|Q2FGF7|RECO_STAA3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|172048906|sp|A6QHA9|RECO_STAAE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|189039773|sp|A8Z4A5|RECO_STAAT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|57286145|gb|AAW38239.1| DNA repair protein RecO family [Staphylococcus aureus subsp. aureus COL] gi|87128380|gb|ABD22894.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|150374481|dbj|BAF67741.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus str. Newman] gi|160368603|gb|ABX29574.1| recombination protein RecO [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257861763|gb|EEV84562.1| RecO family DNA repair protein [Staphylococcus aureus A5948] gi|259160863|gb|EEW45883.1| hypothetical protein SA930_1657 [Staphylococcus aureus 930918-3] gi|259162810|gb|EEW47375.1| hypothetical protein SAD30_0298 [Staphylococcus aureus D30] gi|282594463|gb|EFB99448.1| DNA repair protein RecO [Staphylococcus aureus A9765] gi|294824623|gb|EFG41046.1| DNA repair protein RecO [Staphylococcus aureus A9754] gi|329728390|gb|EGG64827.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus 21189] Length = 250 Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 64/184 (34%), Gaps = 3/184 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + II+ YGE + I+ ++ + R + + Q V + Sbjct: 1 MLMRQKGIIIKAVDYGESDKIITILNEHGAKVPLMARRAKKVKTGLQAQTQLFVYGLFIY 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +G +V+ H + + Y + + R + E + Y +L L Sbjct: 61 NQWRGMGTLNSVDVISQHYKLQMDLYVSSYAALAAETIERSMDEGDIAPYNYQLLQFVLE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVCRSVGL 177 + + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 121 KIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGAISRQEAS 180 Query: 178 PYAE 181 Sbjct: 181 KDVH 184 >gi|313888960|ref|ZP_07822620.1| DNA repair protein RecO [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845133|gb|EFR32534.1| DNA repair protein RecO [Peptoniphilus harei ACS-146-V-Sch2b] Length = 234 Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 54/144 (37%), Gaps = 1/144 (0%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RSRLAQN 65 I+L +GE + I+ V T++YG+ V+ S + + + + + + Sbjct: 10 GIVLNEMGFGESSKIIRVFTKEYGKISIMVKGAMSPKSRNLSVSQVFGLNEYLLKKGQSF 69 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 ++LES+ + +Y + + + E + +D+L LN Sbjct: 70 FYISDSKILESNFKIRENYDNLIYASLLLEIIDKSSISGEANKKAFDLLRKTLNFFNFTK 129 Query: 126 VIGKIFVQIELMLLKNIGFGLDLT 149 + + EL L IG+ L Sbjct: 130 DPIGLALAFELKYLSFIGYRPKLD 153 >gi|218131842|ref|ZP_03460646.1| hypothetical protein BACEGG_03464 [Bacteroides eggerthii DSM 20697] gi|317474543|ref|ZP_07933817.1| DNA repair protein RecO [Bacteroides eggerthii 1_2_48FAA] gi|217986145|gb|EEC52484.1| hypothetical protein BACEGG_03464 [Bacteroides eggerthii DSM 20697] gi|316909224|gb|EFV30904.1| DNA repair protein RecO [Bacteroides eggerthii 1_2_48FAA] Length = 242 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 51/163 (31%), Gaps = 5/163 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L Y + +II+++ T GR V +S + + Q +LV + Sbjct: 1 MLQKTQGIVLHSLKYKDTSIIVDIYTEVSGRASFLVPVSRSRKAAVKSVLFQPLSLVELE 60 Query: 58 WRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R + + + + + L L+R L E L+ L Sbjct: 61 ADFRPNTTIYKVKEAKSFYPFTSIPYDPYKSAIALFLSEFLYRALREEAENRPLFAYLQH 120 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 + S + + L + +G +L Sbjct: 121 SIVWLDECGSGFANFHLVFLMRLSRFLGLYPNLEDYHSGDCFD 163 >gi|288929801|ref|ZP_06423644.1| DNA repair protein RecO [Prevotella sp. oral taxon 317 str. F0108] gi|288328902|gb|EFC67490.1| DNA repair protein RecO [Prevotella sp. oral taxon 317 str. F0108] Length = 243 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 50/156 (32%), Gaps = 5/156 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + AI+L YG+ +I +++T +GR ++ + + + Q ++ + Sbjct: 1 MLVKTHAIVLRSIKYGDSQLITDMLTETFGRVSFVSNIPRTQKAKIKKQLFQPLTILEIE 60 Query: 58 WRSRLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R L + + S + L L + + LY + Sbjct: 61 LDHRPNTRLQRLRDARMAYPFTSIPYSEAKLAITLFLAEFLCHATRSEQQNVPLYRYVET 120 Query: 117 FLNCHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKC 151 + + + L + +GF +L Sbjct: 121 SVRWLDGAQQLFANFHLAFMIRLSRFLGFYPNLENY 156 >gi|255320777|ref|ZP_05361952.1| DNA repair protein RecO [Acinetobacter radioresistens SK82] gi|262379447|ref|ZP_06072603.1| DNA repair protein RecO [Acinetobacter radioresistens SH164] gi|255302154|gb|EET81396.1| DNA repair protein RecO [Acinetobacter radioresistens SK82] gi|262298904|gb|EEY86817.1| DNA repair protein RecO [Acinetobacter radioresistens SH164] Length = 236 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 30/209 (14%), Positives = 60/209 (28%), Gaps = 18/209 (8%) Query: 1 MYWQD-DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 M + ++ R Y EK+ ++ + T +YGR G +R + Sbjct: 1 MRNEALHGYLIHYRKYREKSHLVYLFTEEYGRIDGILRQV----------PPPQYQSLAL 50 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + ++ + F G L R P E + Y + L Sbjct: 51 QASGKGELKNFSKLEIVNQPIFFYGDAFFSGFYLNELLLRLCPLEEAMPQTYQQYQLTLV 110 Query: 120 CHKIPSVIG-------KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + +V +I Q E +LL+ +G+ +D + + + Sbjct: 111 KLQQLAVNTQPGLLLRQILRQFEHILLEELGYAIDFSVDAHQQPVEPERHYHFQIQEGFI 170 Query: 173 RSVGLPYAEKMLVLPSFLWKEEQTIDADS 201 A + E+ D Sbjct: 171 PVQKASSATLAGQSLLTMLDYEKGADFSQ 199 >gi|256827189|ref|YP_003151148.1| DNA repair protein RecO [Cryptobacterium curtum DSM 15641] gi|256583332|gb|ACU94466.1| DNA repair protein RecO [Cryptobacterium curtum DSM 15641] Length = 256 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 54/195 (27%), Gaps = 9/195 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + AI+L E + I++ + R R + + + Sbjct: 7 HERAIVLHRNRLRESDAIVDALIEDGSRISFVARGALKPSNPFAARLDLFGVCDVMLAPS 66 Query: 64 QNLGEFRFEVL-ESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + L L +H + L R E P L+ M L+ Sbjct: 67 RGLAIVSEARLAAAHAPLRSDIIRNAAAAPILDALRRCAHEDLPVPRLFPMTESILDHLS 126 Query: 123 IPSVI--GKIFVQIELMLLKNIGFGLDLTKCVVTG------VTQDLLWVSPKSGGAVCRS 174 I + L L +GF L C+ G D + S GGA+C Sbjct: 127 TCEEIVLCPLTAAYLLKLFALLGFRPSLDTCIDCGQSLLEDNPTDEVRFSYIDGGALCYD 186 Query: 175 VGLPYAEKMLVLPSF 189 + L L + Sbjct: 187 CAASHVHVALSLHTL 201 >gi|225012385|ref|ZP_03702821.1| DNA repair protein RecO [Flavobacteria bacterium MS024-2A] gi|225003362|gb|EEG41336.1| DNA repair protein RecO [Flavobacteria bacterium MS024-2A] Length = 241 Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 57/157 (36%), Gaps = 7/157 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM-----QPILQAGNLVR 55 M +A+ L YG+ ++I T++YG ++ S R + + + L+ Sbjct: 1 MQSSTEALTLTTVKYGDSSLIAACYTKEYGLQSYMLKGILSSRTNKKTPKSLFEPLTLLE 60 Query: 56 VNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREP--CLELYDM 113 + LG + L + L + + + + + E +LY Sbjct: 61 LEATKNSTDRLGFIKEAKLHYPYQTIPFDLRKKTLLFFLAEVIQQVIKEEQEANNQLYAF 120 Query: 114 LNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTK 150 L + +G +++ L L K IGF +++ Sbjct: 121 LKKRMLWLDTEENVGLFHIKLMLDLSKFIGFYPNISD 157 >gi|167764150|ref|ZP_02436277.1| hypothetical protein BACSTE_02534 [Bacteroides stercoris ATCC 43183] gi|167698266|gb|EDS14845.1| hypothetical protein BACSTE_02534 [Bacteroides stercoris ATCC 43183] Length = 242 Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 52/163 (31%), Gaps = 5/163 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L Y + +II+++ T GR V +S + + Q +LV + Sbjct: 1 MLQKTQGIVLHSLKYKDTSIIVDIYTEVSGRASFLVPVSRSRKAAVKSVLFQPLSLVELE 60 Query: 58 WRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R ++ + + + + L L+R L E L+ L Sbjct: 61 ADFRPNTSIYKVKEAKSFYPFTSIPYDPYKSAIALFLSEFLYRALREEAENRPLFAYLQH 120 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 + S + + L + +G +L Sbjct: 121 SIVWLDECGSGFANFHLVFLMRLSRFLGLYPNLEDYHGGDYFD 163 >gi|15924556|ref|NP_372090.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus Mu50] gi|15927146|ref|NP_374679.1| hypothetical protein SA1395 [Staphylococcus aureus subsp. aureus N315] gi|156979884|ref|YP_001442143.1| hypothetical protein SAHV_1553 [Staphylococcus aureus subsp. aureus Mu3] gi|257793642|ref|ZP_05642621.1| DNA repair protein RecO [Staphylococcus aureus A9781] gi|258411058|ref|ZP_05681338.1| DNA repair protein RecO [Staphylococcus aureus A9763] gi|258420138|ref|ZP_05683093.1| DNA repair protein RecO [Staphylococcus aureus A9719] gi|258423994|ref|ZP_05686876.1| DNA repair protein RecO [Staphylococcus aureus A9635] gi|258437398|ref|ZP_05689382.1| DNA repair protein recO [Staphylococcus aureus A9299] gi|258443604|ref|ZP_05691943.1| DNA repair protein recO [Staphylococcus aureus A8115] gi|258446811|ref|ZP_05694965.1| DNA repair protein recO [Staphylococcus aureus A6300] gi|258448725|ref|ZP_05696837.1| DNA repair protein recO [Staphylococcus aureus A6224] gi|258453542|ref|ZP_05701520.1| DNA repair protein recO [Staphylococcus aureus A5937] gi|282893067|ref|ZP_06301301.1| DNA repair protein RecO [Staphylococcus aureus A8117] gi|282928199|ref|ZP_06335804.1| DNA repair protein RecO [Staphylococcus aureus A10102] gi|295406689|ref|ZP_06816494.1| DNA repair protein RecO [Staphylococcus aureus A8819] gi|297245729|ref|ZP_06929594.1| DNA repair protein RecO [Staphylococcus aureus A8796] gi|54039036|sp|P65986|RECO_STAAN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|54041796|sp|P65985|RECO_STAAM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|166221911|sp|A7X2W3|RECO_STAA1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|13701364|dbj|BAB42658.1| SA1395 [Staphylococcus aureus subsp. aureus N315] gi|14247337|dbj|BAB57728.1| similar to DNA repair protein RecO [Staphylococcus aureus subsp. aureus Mu50] gi|156722019|dbj|BAF78436.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|257787614|gb|EEV25954.1| DNA repair protein RecO [Staphylococcus aureus A9781] gi|257840208|gb|EEV64672.1| DNA repair protein RecO [Staphylococcus aureus A9763] gi|257843849|gb|EEV68243.1| DNA repair protein RecO [Staphylococcus aureus A9719] gi|257845615|gb|EEV69647.1| DNA repair protein RecO [Staphylococcus aureus A9635] gi|257848603|gb|EEV72591.1| DNA repair protein recO [Staphylococcus aureus A9299] gi|257851010|gb|EEV74953.1| DNA repair protein recO [Staphylococcus aureus A8115] gi|257854386|gb|EEV77335.1| DNA repair protein recO [Staphylococcus aureus A6300] gi|257858003|gb|EEV80892.1| DNA repair protein recO [Staphylococcus aureus A6224] gi|257864273|gb|EEV87023.1| DNA repair protein recO [Staphylococcus aureus A5937] gi|282590006|gb|EFB95088.1| DNA repair protein RecO [Staphylococcus aureus A10102] gi|282764385|gb|EFC04511.1| DNA repair protein RecO [Staphylococcus aureus A8117] gi|285817248|gb|ADC37735.1| DNA recombination and repair protein RecO [Staphylococcus aureus 04-02981] gi|294968436|gb|EFG44460.1| DNA repair protein RecO [Staphylococcus aureus A8819] gi|297177380|gb|EFH36632.1| DNA repair protein RecO [Staphylococcus aureus A8796] gi|329727140|gb|EGG63596.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus 21172] gi|329733186|gb|EGG69523.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus 21193] Length = 250 Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 64/184 (34%), Gaps = 3/184 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + II+ YGE + I+ ++ + R + + Q V + Sbjct: 1 MLMRQKGIIIKAVDYGESDKIITILNEHGAKVPLMARRAKKVKTGLQAQTQLFVYGLFIY 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +G +V+ H + + Y + + R + E + Y +L L Sbjct: 61 NQWRGMGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDEGDIAPYNYQLLQFVLE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVCRSVGL 177 + + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 121 KIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGAISRQEAS 180 Query: 178 PYAE 181 Sbjct: 181 KDVH 184 >gi|82751169|ref|YP_416910.1| recombination protein [Staphylococcus aureus RF122] gi|119361488|sp|Q2YT13|RECO_STAAB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|82656700|emb|CAI81127.1| probable recombination protein [Staphylococcus aureus RF122] Length = 250 Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 64/184 (34%), Gaps = 3/184 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + II+ YGE + I+ ++ + R + + Q V + Sbjct: 1 MLMRQKGIIIKAVDYGESDKIITILNEHGAKVPLMARRAKKVKTGLQAQTQLFVYGLFIY 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +G +V+ H + + Y + + R + E + Y +L L Sbjct: 61 NQWRGMGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDEGDIAPYNYQLLQFVLE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVCRSVGL 177 + + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 121 KIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGAISRQEAS 180 Query: 178 PYAE 181 Sbjct: 181 KDVH 184 >gi|197122960|ref|YP_002134911.1| DNA repair protein RecO [Anaeromyxobacter sp. K] gi|238689872|sp|B4UG90|RECO_ANASK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|196172809|gb|ACG73782.1| DNA repair protein RecO [Anaeromyxobacter sp. K] Length = 254 Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 52/157 (33%), Gaps = 3/157 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGF--VRNGQSHRMQPILQAGNLVRVNWR 59 + ++L YGE + ++ ++T + G+ F R L+ L+ R Sbjct: 3 RVKLTGVVLRAVDYGESDRVVTLLTAERGKVSAFARGARASRRRFGGALEPFTLLSAEVR 62 Query: 60 SRL-AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R + LG V+ A + + + +P EL+++L +L Sbjct: 63 ERSGSDLLGLDSVSVVRGFGALRGDLGRIACAGYAAELARELVRDHQPHDELFELLVAYL 122 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + EL L+ G L C G Sbjct: 123 DALDAGPPRPAALRAFELGALRAAGLMPRLDACARCG 159 >gi|220917752|ref|YP_002493056.1| DNA repair protein RecO [Anaeromyxobacter dehalogenans 2CP-1] gi|254790505|sp|B8JDE1|RECO_ANAD2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|219955606|gb|ACL65990.1| DNA repair protein RecO [Anaeromyxobacter dehalogenans 2CP-1] Length = 254 Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 51/153 (33%), Gaps = 3/153 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGF--VRNGQSHRMQPILQAGNLVRVNWRSRL- 62 ++L YGE + ++ ++T + G+ F R L+ L+ R R Sbjct: 7 TGVVLRAVDYGESDRVVTLLTAERGKVSAFARGARASRRRFGGALEPFTLLSAEVRERSG 66 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + LG V+ A + + + +P EL+++L +L+ Sbjct: 67 SDLLGLDSVSVVRGFGALRGDLGRIACAGYAAELARELVRDHQPHDELFELLVAYLDALD 126 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 EL L+ G L C G Sbjct: 127 AGPPRPAALRAFELGALRAAGLMPRLDACARCG 159 >gi|71279899|ref|YP_270775.1| recombination protein O [Colwellia psychrerythraea 34H] gi|71145639|gb|AAZ26112.1| recombination protein O [Colwellia psychrerythraea 34H] Length = 236 Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 79/243 (32%), Gaps = 18/243 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNW 58 M Q +A +L R Y E +++++T Q G+ V GQS R + ++Q +++ Sbjct: 1 MIEQ-NAFVLHSRPYRENQQLVDLLTEQDGKVTALVYVGQSKRSIKKGLIQPFLPLKLTL 59 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + + + +S+ L L R L E+ C L+ L Sbjct: 60 KGQGNVKYITQIDSISKSYS---LVKYSLFSSFYINELLIRLLTEQIACQHLFSQYQTTL 116 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 I EL LL+ +G D + V + + G Sbjct: 117 TALAQGEEIAPQLRLFELALLEELGLSFDFSPVFEHDV--NYFHYIAEQGFVPVYDPFPK 174 Query: 179 YAEKMLVLPSFLWKEE-----QTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 + + + Q ++ + F+L L + + + + R+ F Sbjct: 175 NSTQCFDKTHLQAIAQRGSLYQNGMSEDVSYTFKL----LMRQVINQLLGNKPLNSRKLF 230 Query: 233 LGK 235 K Sbjct: 231 ANK 233 >gi|327382538|gb|AEA54014.1| DNA repair protein recO [Lactobacillus casei LC2W] gi|327385735|gb|AEA57209.1| DNA repair protein recO [Lactobacillus casei BD-II] Length = 259 Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 25/187 (13%), Positives = 65/187 (34%), Gaps = 2/187 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS--RLA 63 + +++ ++Y E +++++++T ++G+ + + + ++ R + Sbjct: 9 EGLVMSRQNYRESDMLVKILTDRFGKKMFLLNRARKPGFTLGAGILPFTHADYIGEVRES 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + +L Y + P+ P ++ + L Sbjct: 69 GLSYLSAIKNATQYRQISDDITLNAYAAYIFGLIDLAFPDGRPVGFWFNQIKQALYLIDS 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I IE+ +LK G + CV+ G L S GG +C++ ++ Sbjct: 129 GLDPQIIANVIEVQMLKEYGVEPNWRGCVIDGRADLPLDFSESYGGLLCQNHWDKDPHRL 188 Query: 184 LVLPSFL 190 P + Sbjct: 189 HASPRVI 195 >gi|312869095|ref|ZP_07729269.1| DNA repair protein RecO [Lactobacillus oris PB013-T2-3] gi|311095341|gb|EFQ53611.1| DNA repair protein RecO [Lactobacillus oris PB013-T2-3] Length = 261 Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 58/172 (33%), Gaps = 2/172 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 II+ R Y E++++++++T + G + +VR+ + + ++ L + Sbjct: 9 RGIIIYRRDYRERDLLIKILTDRIGPAMFYVRDAKKRGFRLASDILPFTHGSYIGSLDDH 68 Query: 66 --LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + S Y + + + +P +D + L Sbjct: 69 GLSFINTASETHQYQHIAGDLSRNAYATYILALVDHAFTDGQPLGGWFDQVAAALALIDR 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + IE LL G +CV+ G L S + GG +C Sbjct: 129 GQDEQVVTNVIETQLLTVFGVAPTWDRCVICGRADRPLDFSEQYGGMLCNRH 180 >gi|21283247|ref|NP_646335.1| hypothetical protein MW1518 [Staphylococcus aureus subsp. aureus MW2] gi|49486401|ref|YP_043622.1| putative recombination protein O [Staphylococcus aureus subsp. aureus MSSA476] gi|38258613|sp|Q8NWB5|RECO_STAAW RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|56749514|sp|Q6G901|RECO_STAAS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|21204687|dbj|BAB95383.1| MW1518 [Staphylococcus aureus subsp. aureus MW2] gi|49244844|emb|CAG43305.1| putative recombination protein O [Staphylococcus aureus subsp. aureus MSSA476] Length = 250 Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 64/184 (34%), Gaps = 3/184 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + II+ YGE + I+ ++ + R + + Q V + Sbjct: 1 MLMRQKGIIIKAVDYGESDKIITILNEHGAKVPLMARRAKKVKTGLQAQTQLFVYGLFIY 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +G +V+ H + + Y + + R + E + Y +L L Sbjct: 61 NQWRGMGTLNSVDVISQHYKLQMDLFVSSYASLAAETIERSMDEGDIAPYNYQLLQFVLE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVCRSVGL 177 + + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 121 KIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGAISRQEAS 180 Query: 178 PYAE 181 Sbjct: 181 KDVH 184 >gi|118444042|ref|YP_878551.1| DNA repair protein RecO [Clostridium novyi NT] gi|171472989|sp|A0Q1P9|RECO_CLONN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|118134498|gb|ABK61542.1| DNA repair protein RecO [Clostridium novyi NT] Length = 256 Score = 72.2 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 71/202 (35%), Gaps = 7/202 (3%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-S 60 ++ A+IL + Y E + ++ + T + G+ + + + + I + Sbjct: 8 IFKTKALILKTQDYKENDKLVWLFTEKIGKVCAIAKGAKKSKSKFIASTQTFCFGEYVLY 67 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R E+++S + L YG + L + + EL+ Sbjct: 68 RGKSLYSINEVEIIDSFQSLLSDMDTITYGSYFCELILIALEQEQSDRELFKDFIKSFYF 127 Query: 121 HKIPSVI-GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV-SPKSGGAVCRSV--- 175 K ++ + EL LLK G+G D KC + G + S + G VC + Sbjct: 128 LKNQAMDLEILARTFELKLLKATGYGFDFEKCCICGKRINKTNYLSIQYYGGVCDNCEKT 187 Query: 176 -GLPYAEKMLVLPSFLWKEEQT 196 G + + FL+K Sbjct: 188 GGFKISYAAYGVLKFLYKTSIE 209 >gi|332881733|ref|ZP_08449381.1| DNA repair protein RecO [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680372|gb|EGJ53321.1| DNA repair protein RecO [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 241 Score = 72.2 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 48/154 (31%), Gaps = 5/154 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + ++L Y + ++I+++ T G V+ +S + + +++ ++ Sbjct: 1 MQEKTQGVVLRTLKYNDNSLIVDIYTATRGTVSFMVKLPKSRKATLKGVFFRPLSILEID 60 Query: 58 WRSRLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R L ++ + L L R L L+ + Sbjct: 61 FDYRQKSALQRIRDVRFDYTYQSLPYDPYKSSIALFLAEFLCRVLKHEAGGGPLFSYILY 120 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLT 149 L F L + +GF ++ Sbjct: 121 SLQWLDASERAFSNFHLVFITRLTRFLGFYPNVE 154 >gi|213963746|ref|ZP_03391996.1| DNA repair protein RecO [Capnocytophaga sputigena Capno] gi|213953626|gb|EEB64958.1| DNA repair protein RecO [Capnocytophaga sputigena Capno] Length = 238 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 5/152 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP----ILQAGNLVRV 56 MY + +AI++ Y + ++I++ T+ G + S + + Q L+ + Sbjct: 1 MYEKVEAIVISNLKYSDNSLIVKCFTKTLGTRSYLQQGILSAKKNSQTIALFQPFTLLEL 60 Query: 57 NWRSRLAQNLGEFRFEVL-ESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + +LG + + + + L P +EL++ L Sbjct: 61 VATHKSNGSLGRIKEAKVTTPYLSLHTDIYKSTVSLFLSEICANICTSEAPDIELFNYLE 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLD 147 L ++ L L K +GF D Sbjct: 121 EKLIYLDRNEFSANFHLKFLLDLSKYLGFYPD 152 >gi|167747960|ref|ZP_02420087.1| hypothetical protein ANACAC_02692 [Anaerostipes caccae DSM 14662] gi|167652610|gb|EDR96739.1| hypothetical protein ANACAC_02692 [Anaerostipes caccae DSM 14662] Length = 246 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 25/179 (13%), Positives = 55/179 (30%), Gaps = 2/179 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 + ++L + GE + + ++T++ GR F R + L + Sbjct: 4 EIKVTGLVLNAGNIGEFDKRVTLLTKERGRITAFARGAKKATSPYAAACQPLTFGEFSLY 63 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM--LNIFLN 119 ++ + + + + L + +L + Sbjct: 64 EGRSSFNLMWADVGHYFEGVKEDLLLVSYGSYFCEFASYLTRENNDEKEILKLLYLSLRA 123 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 K I E+ L+ G G+++ C G T+DL +GG +C + Sbjct: 124 LEKKTIDPKLIRRVFEIKLMALYGQGMEVFCCTQCGSTEDLSCFDSSAGGILCSNCRKS 182 >gi|283770642|ref|ZP_06343534.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus H19] gi|283460789|gb|EFC07879.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus H19] Length = 250 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 3/181 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + II+ YGE + I+ ++ + R + + Q V + Sbjct: 1 MLMRQKGIIIKAIDYGESDKIITILNEHGAKVPLMARRAKKVKTGLQAQTQLFVYGLFIY 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +G +V+ H + + Y + + R + E + Y +L L Sbjct: 61 NQWRGMGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDEGDIAPYNYQLLQFVLE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVCRSVGL 177 + + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 121 KIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGAISRQEAS 180 Query: 178 P 178 Sbjct: 181 K 181 >gi|302333242|gb|ADL23435.1| putative recombinational DNA repair protein (RecF pathway) [Staphylococcus aureus subsp. aureus JKD6159] Length = 250 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 64/184 (34%), Gaps = 3/184 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + II+ YGE + I+ ++ + R + + Q V + Sbjct: 1 MLMRQKGIIIKAVDYGESDKIITILNEHGAKVPLMARRAKKVKTGLQAQTQLFVYGLFIY 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +G +V+ H + + Y + + R + E + Y +L L Sbjct: 61 NQWRGMGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDEGDIAPYNYQLLQFVLE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVCRSVGL 177 + + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 121 KIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGAISRQEAS 180 Query: 178 PYAE 181 Sbjct: 181 KDIH 184 >gi|238924232|ref|YP_002937748.1| DNA repair and genetic recombination protein [Eubacterium rectale ATCC 33656] gi|238875907|gb|ACR75614.1| DNA repair and genetic recombination protein [Eubacterium rectale ATCC 33656] gi|291529104|emb|CBK94690.1| DNA replication and repair protein RecO [Eubacterium rectale M104/1] Length = 242 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 60/179 (33%), Gaps = 2/179 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++L G+ + + ++T++ G+ F R + Q + + + ++ Sbjct: 8 TGMVLSAMPVGDFDKRITILTKERGKITAFARGARRPNSQLMAGSNPFSFGEFELFEGKS 67 Query: 66 LGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + ++ +L +Y G + F E ++ +L L + P Sbjct: 68 AYSLSKVTISNYFRELTQDLEAVYTGFYFLEFCGYFCQENNDEKDMLKLLYQSLRALESP 127 Query: 125 -SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + EL + G G L C+ + L S + GG C + G + Sbjct: 128 AYKNELVRAVFELKAITINGEGPSLFSCIHCHSREGLNVFSARRGGVFCDNCGTQVQGR 186 >gi|282911204|ref|ZP_06319006.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus WBG10049] gi|282324899|gb|EFB55209.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus WBG10049] Length = 250 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 64/184 (34%), Gaps = 3/184 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + II+ YGE + I+ ++ + R + + Q V + Sbjct: 1 MLMRQKGIIIKAVDYGESDKIITILNEYGAKVPLMARRAKKVKTGLQAQTQLFVYGLFIY 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +G +V+ H + + Y + + R + E + Y +L L Sbjct: 61 NKWRGMGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDEGDVAPYNYQLLQFVLE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVCRSVGL 177 + + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 121 KIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKYDGAISRQEAS 180 Query: 178 PYAE 181 Sbjct: 181 KDVH 184 >gi|282916836|ref|ZP_06324594.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus D139] gi|282319323|gb|EFB49675.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus D139] Length = 250 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 3/181 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + II+ YGE + I+ ++ + R + + Q V + Sbjct: 1 MLMRQKGIIIKAVDYGESDKIITILNEHGAKVPLMARRAKKVKTGLQAQTQLFVYGLFIY 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +G +V+ H + + Y + + R + E + Y +L L Sbjct: 61 NQWRGMGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDEGDIAPYNYQLLQFVLE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVCRSVGL 177 + + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 121 KIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGAISRQEAS 180 Query: 178 P 178 Sbjct: 181 K 181 >gi|227495960|ref|ZP_03926271.1| Recombinational DNA repair protein (RecF pathway) [Actinomyces urogenitalis DSM 15434] gi|226834514|gb|EEH66897.1| Recombinational DNA repair protein (RecF pathway) [Actinomyces urogenitalis DSM 15434] Length = 161 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 21/156 (13%), Positives = 53/156 (33%), Gaps = 9/156 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++D+AI+L GE + I+ ++TR +G+ + + R L+ ++V V + Sbjct: 6 YRDEAIVLRTYRLGEADRIIVMLTRAHGQVRAVAKGVRKTGSRFGARLEPFSMVDVQLHA 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER-----EPCLELYDMLN 115 + ++ + ++F + R + + + +L Sbjct: 66 GRSLDVVTQVETIEPFSAPVCSDYAVFTCASTMVETAERLTEDDGDLGTTDSPQQFLLLY 125 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKC 151 L + ++ LL+ + C Sbjct: 126 GALAAMARRRHAPGLV--LDSYLLRALALAGWAPSC 159 >gi|298387921|ref|ZP_06997470.1| DNA repair protein RecO [Bacteroides sp. 1_1_14] gi|298259328|gb|EFI02203.1| DNA repair protein RecO [Bacteroides sp. 1_1_14] Length = 242 Score = 72.2 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 53/191 (27%), Gaps = 5/191 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L Y + +II+++ T GR V +S + + Q + + Sbjct: 1 MLQKTKGIVLHTLKYNDTSIIVDMYTELSGRTSFLVPVPRSRKAAVKSVLFQPLSFIEFE 60 Query: 58 WRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R L + + + L L+R + E L+ L Sbjct: 61 ADYRPNATLYRVKEAKSFYPFTSIPYDPYKSSMALFLAEFLYRAIREEAENRPLFAYLQH 120 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + + L + +G +L L + + S Sbjct: 121 SVIWLDECREGFANFHLVFLMRLSRFLGLYPNLEDYHTGDYFDLLNACFTSTRPQLHSSY 180 Query: 176 GLPYAEKMLVL 186 P L Sbjct: 181 INPEEAGRLRQ 191 >gi|121595568|ref|YP_987464.1| DNA repair protein RecO [Acidovorax sp. JS42] gi|166221880|sp|A1WAW3|RECO_ACISJ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|120607648|gb|ABM43388.1| DNA repair protein RecO [Acidovorax sp. JS42] Length = 262 Score = 72.2 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 48/138 (34%), Gaps = 3/138 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSR 61 + A +L + E ++ILE TR YGR + + +P+L +RV + Sbjct: 8 DEPAYVLHSYDWSESSLILETFTRHYGRVALVAKGAKKPTSNFRPVLLPLQPLRVTYTLG 67 Query: 62 LAQNLGEFRFEV-LESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + + + + L GL L R L + L+D + Sbjct: 68 GEGHGEIHALKGAEWAGGHVMPTGDALLSGLYLNELLLRLLAREDTHAPLFDTYAGVVRV 127 Query: 121 HKIPSVIGKIFVQIELML 138 G+ +E +L Sbjct: 128 LATVDHEGEHGDALEPVL 145 >gi|261416565|ref|YP_003250248.1| DNA repair protein RecO [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373021|gb|ACX75766.1| DNA repair protein RecO [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327326|gb|ADL26527.1| putative DNA repair protein RecO [Fibrobacter succinogenes subsp. succinogenes S85] Length = 263 Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 38/197 (19%), Positives = 66/197 (33%), Gaps = 24/197 (12%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 + AI+L Y + + I++ +T + G V+ G+ + L L V +R Sbjct: 2 IKTRAIVLHRFPYSDSSFIVKALTEESGIVSFIVKGGKKKESPFRGALDPLALSEVVFRQ 61 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 +L + L L + L + R+ P+ P E ++ L ++ Sbjct: 62 NPNTDLQFIKEATLLDWRKNLRNDLLSTAKAQVMTEMILRYAPQGVPLQEEFERLEQAIS 121 Query: 120 CHKIPSVI----------------GKIFVQIELMLLKNI---GFGLDLTKCVVTGVT--Q 158 S LL G+ LDLT C G T + Sbjct: 122 EFDSDSPQDSPTPEGSAHSSTSSVPDKSRIFAQWLLDTCDMWGYNLDLTTCSRCGHTLEE 181 Query: 159 DLLWVSPKSGGAVCRSV 175 P++GG VC++ Sbjct: 182 PAADFFPETGGFVCQAC 198 >gi|166032678|ref|ZP_02235507.1| hypothetical protein DORFOR_02393 [Dorea formicigenerans ATCC 27755] gi|166027035|gb|EDR45792.1| hypothetical protein DORFOR_02393 [Dorea formicigenerans ATCC 27755] Length = 246 Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 60/179 (33%), Gaps = 2/179 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 ++L G+ + + ++T++ G+ F R + + + Sbjct: 3 QITVTGMVLSATPVGDYDRRVVLLTKERGKIAAFARGARRTNSSLLGVTSPFSFGEFVVY 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSL-FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + ++ ++L + YG + + E EL +L L Sbjct: 63 EGRTSYTLMSASISNYFSELRTDVEGAYYGFYFLDFAGYYAREANDETELLKLLYQTLRA 122 Query: 121 H-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + I EL + G G + +CV G ++ + S + GG VCR + Sbjct: 123 LTNVHIPNRLIRCIYELKAVCINGEGPQVFECVSCGRWEENMKFSVRKGGLVCRKCEIH 181 >gi|310659077|ref|YP_003936798.1| DNA double strand break repair/recombination protein [Clostridium sticklandii DSM 519] gi|308825855|emb|CBH21893.1| DNA double strand break repair and homologous recombination factor [Clostridium sticklandii] Length = 248 Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 68/161 (42%), Gaps = 3/161 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + + I++ YGE + IL +++++ G+ F + + + + + N+ Sbjct: 1 MQIETEGIVVKTVKYGEADTILTIVSQKLGKITVFTKASKRVKSPLMSASQIFAYSNFVL 60 Query: 61 -RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + R E+++++ F Y + + + E + ++L+++L L+ Sbjct: 61 THQSGSYRLQRVELIKNYYKISTDLDKFFYASYFMELSEKLMIEHQTNIKLFNLLKDTLD 120 Query: 120 CHKIPSVI--GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 + + EL +L+ GF ++ KC G+ Q Sbjct: 121 ILLELDTQKLELMRIVYELKILECSGFKPEVLKCANCGIIQ 161 >gi|326386768|ref|ZP_08208389.1| recombinational DNA repair protein (RecF pathway)-like protein [Novosphingobium nitrogenifigens DSM 19370] gi|326208821|gb|EGD59617.1| recombinational DNA repair protein (RecF pathway)-like protein [Novosphingobium nitrogenifigens DSM 19370] Length = 202 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 60/148 (40%), Gaps = 3/148 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + +AI+ +R +GE I+ +T +G +V + ++P+L GN + V R+ Sbjct: 1 MLIRVEAILCAMRPHGEHGGIIRALTGDHGMVAAYVSGARGRTLRPVLIPGNTLAVEIRA 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R L R E++ S L + LPE P L+ L L+ Sbjct: 61 RGGSQLPGARTELVASRAPWLGEPLPAAAIDWATALTAATLPEGHPYPALHTALGALLDA 120 Query: 121 HKIPSV---IGKIFVQIELMLLKNIGFG 145 ++ E +LL+ +G+G Sbjct: 121 ICHAPSARGWARVLAGYEALLLREVGYG 148 >gi|289550663|ref|YP_003471567.1| DNA recombination and repair protein RecO [Staphylococcus lugdunensis HKU09-01] gi|315658158|ref|ZP_07911030.1| recombination protein O [Staphylococcus lugdunensis M23590] gi|289180195|gb|ADC87440.1| DNA recombination and repair protein RecO [Staphylococcus lugdunensis HKU09-01] gi|315496487|gb|EFU84810.1| recombination protein O [Staphylococcus lugdunensis M23590] Length = 251 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 72/209 (34%), Gaps = 10/209 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + II+ YGE + ++ ++ + VR + + V + Sbjct: 1 MLMKQKGIIIKSVDYGESDKVITILNEHGAKVPLMVRRAKKAKSGFQAHTQLFVYGLFIY 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +G +V+ H L Y S + + + ++E Y++L+ L Sbjct: 61 NQWRGMGTLNSIDVINQHYELRLDLYTHSYASLSAEIIDKAMDDQEISKYYYELLHFVLT 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGGAVCRSVGL 177 + + + L + GF + CV+TG T +L+ S K GA+ + Sbjct: 121 KITAGTSAQLMSIITMLKCMHKYGFSANFNHCVITGSTNPSNLIGYSFKFHGAISQEAA- 179 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAF 206 P L +T+ ++ Sbjct: 180 ------YRDPHALLISNKTLYLLNILQQL 202 >gi|29348840|ref|NP_812343.1| DNA repair protein [Bacteroides thetaiotaomicron VPI-5482] gi|81586736|sp|Q8A275|RECO_BACTN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|29340746|gb|AAO78537.1| DNA repair protein [Bacteroides thetaiotaomicron VPI-5482] Length = 242 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 53/191 (27%), Gaps = 5/191 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L Y + +II+++ T GR V +S + + Q + + Sbjct: 1 MLQKTKGIVLHTLKYNDTSIIVDMYTELSGRTSFLVPVPRSRKAAVKSVLFQPLSFIEFE 60 Query: 58 WRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R L + + + L L+R + E L+ L Sbjct: 61 ADFRPNATLYRVKEAKSFYPFTSIPYDPYKSSMALFLAEFLYRAVREEAENRPLFAYLQH 120 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + + L + +G +L L + + S Sbjct: 121 SVIWLDECREGFANFHLVFLMRLSRFLGLYPNLEDYHTGDYFDLLNACFTSTRPQLHSSY 180 Query: 176 GLPYAEKMLVL 186 P L Sbjct: 181 INPEEAGRLRQ 191 >gi|224542129|ref|ZP_03682668.1| hypothetical protein CATMIT_01304 [Catenibacterium mitsuokai DSM 15897] gi|224524966|gb|EEF94071.1| hypothetical protein CATMIT_01304 [Catenibacterium mitsuokai DSM 15897] Length = 245 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 83/225 (36%), Gaps = 14/225 (6%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSR 61 + + ++L + E + IL + T YGR + + + + + +L R Sbjct: 8 KTEGVVLKITPSKESDAILSIYTHDYGRISVYGKGIRKINSKNARGVTPSSLSLFELNIR 67 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 R +E + + + +R++PE +P L+ Y L L Sbjct: 68 -KGLSTLVRATGIEYYIHIQDHIETDILAQCLLEYYYRYVPENKPDLDTYAFLVDALKAI 126 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I+ I + ++K+ G L++ CV G T + S GG VCR P Sbjct: 127 DTGYSYKLIYALILVFIMKDNGIELEVDGCVHCGHTS-VTSFSLVDGGFVCRKHQTPQDV 185 Query: 182 KM----------LVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 +M + + +ID LK + +Y++++Y Sbjct: 186 QMSIEALKAIRHIYKTPMAHIDTLSIDESVLKEILFIFEYYIDEY 230 >gi|291542201|emb|CBL15311.1| DNA repair protein RecO [Ruminococcus bromii L2-63] Length = 248 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 23/173 (13%), Positives = 53/173 (30%), Gaps = 2/173 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-R 59 M ++ + +I+ ++ GE++ ++ +T+ G FV+ ++ + A L Sbjct: 1 MKFRTEGLIIKEQNIGEQDKLVFALTKSNGVIRAFVKGAKNIKNGKCAAASLLSYSRLTI 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + ++ + + + P + ++ L Sbjct: 61 YKGRESYIIGEAQPIRIFSKLRSDVTKMCLAQYFCELALTICPREQKADSFLSLVLNSLY 120 Query: 120 CHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV 171 I +E+ L G+ DL C G L GA+ Sbjct: 121 LLSENKRSADLIKPCLEMRLASMAGYMPDLRMCRECGEYITPLMYFLPRIGAL 173 >gi|86157729|ref|YP_464514.1| DNA replication and repair protein RecO [Anaeromyxobacter dehalogenans 2CP-C] gi|119361446|sp|Q2IQJ8|RECO_ANADE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|85774240|gb|ABC81077.1| DNA replication and repair protein RecO [Anaeromyxobacter dehalogenans 2CP-C] Length = 254 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 51/157 (32%), Gaps = 3/157 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGF--VRNGQSHRMQPILQAGNLVRVNWR 59 + ++L YGE + ++ ++T + G+ F R L+ L+ R Sbjct: 3 RVKLTGVVLRAVDYGESDRVVTLLTAERGKVSAFARGARASRRRFGGALEPFTLLSAEVR 62 Query: 60 SRL-AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R + LG V+ A + + + +P EL+D+L +L Sbjct: 63 ERSGSDLLGLDSVSVVRGFGALRGDLGRIACAGYAAELARELVRDHQPHDELFDLLVAYL 122 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 EL L+ G L C G Sbjct: 123 GALDAAPPRPAALRAFELGALRAAGLMPRLDACARCG 159 >gi|325105246|ref|YP_004274900.1| DNA repair protein RecO [Pedobacter saltans DSM 12145] gi|324974094|gb|ADY53078.1| DNA repair protein RecO [Pedobacter saltans DSM 12145] Length = 241 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 31/219 (14%), Positives = 77/219 (35%), Gaps = 13/219 (5%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + I+L V Y E ++++++ T ++G + + + + +LQA +L+ + Sbjct: 1 MLHKTRGIVLKVTDYSESSVVVKIFTEKFGVQSYLINGVKKPKAKVKMNMLQALHLLDMV 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNI 116 + + + + + + +++ + E+ L++ ++ Sbjct: 61 VYHKPMATMHKVSDVRSSPILSSIPYDISKSAIAMFLNEVIYKSIKEQVDDALLFEFIST 120 Query: 117 FLNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + + + L + +GF DL+ + K G V Sbjct: 121 SIELLDQEDGSVANFHLVFLMKLTRFLGFHPDLS------FADTSSYFDLKEGAFVSSEP 174 Query: 176 GLPYAEKMLVLPSFLWKEEQTI-DADSLKSAFQLTDYFL 213 + K L F+ I D ++K LT +L Sbjct: 175 PHAFFIKEFFLEKFIEIIRTPIQDYKNVKLD-NLTRKYL 212 >gi|152995277|ref|YP_001340112.1| DNA repair protein RecO [Marinomonas sp. MWYL1] gi|150836201|gb|ABR70177.1| DNA repair protein RecO [Marinomonas sp. MWYL1] Length = 245 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 69/219 (31%), Gaps = 18/219 (8%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M A ++ R + + I+L+++T + G G R + + I + + Sbjct: 1 MRVS--AYVIHTRPFQDSKILLDMLTLEQGLIRGVWRLPK-KEARVIPGPFLCYEMEFTG 57 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R + A L L L + LP P +++++ + Sbjct: 58 RSDLKT---VKSLESIKSASSLDGLPLYAALYVHELLEKLLPINLPLPDVFELYKWLIEN 114 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + I + + E+ L +G G+++ V + + G Sbjct: 115 LHAGAPIAPLLRRFEVGLFSELGVGINMVSTGRGEVLEARQLYQFHYKFGLRPYYG---- 170 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQ 219 E +P + + +D + +++K L Sbjct: 171 EIPKQMPMLYVEGQVALDYHA--------GKWMDKQVLS 201 >gi|317508571|ref|ZP_07966232.1| recombination protein O [Segniliparus rugosus ATCC BAA-974] gi|316253115|gb|EFV12524.1| recombination protein O [Segniliparus rugosus ATCC BAA-974] Length = 247 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 25/184 (13%), Positives = 62/184 (33%), Gaps = 6/184 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D ++L GE + I+ ++TR++G + + + L+ + V V Sbjct: 4 YRDVGVVLRNHQLGEADRIVALLTREHGLVRAVAKGVRRTRSKFGARLEPFSCVDVQLYQ 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + ++ + L+++ ++ + +I+ L + Sbjct: 64 GRSLDV-ITQAATLDANSEEITADYGKYTTGCAILETATLLAGPQGAPAGQLHTLTRGAL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + + L+ + G+ L C G P++GG VC Sbjct: 123 AALRKGEKPRDLILAAFFLRAMGHAGWMPALADCARCGKEGPHRAFHPRAGGVVCPLCRP 182 Query: 178 PYAE 181 P + Sbjct: 183 PGSS 186 >gi|6647943|sp|Q9ZD01|Y549_RICPR RecName: Full=Uncharacterized protein RP549 gi|3861098|emb|CAA14998.1| unknown [Rickettsia prowazekii] Length = 135 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 48/138 (34%), Positives = 72/138 (52%), Gaps = 3/138 (2%) Query: 102 PEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLL 161 + + L + L +L+ + ++ EL LL G+ LDLTKC V+ VT DL Sbjct: 1 MKEKNILFFFSFLINYLDNLSKNFCF-RDYISFELNLLAETGYKLDLTKCCVSHVTTDLT 59 Query: 162 WVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN 221 +VSPKS A+ VG PY +K+L+LP FL ++ I + K A LT+YF N+Y +N Sbjct: 60 YVSPKSARALSYKVGKPYRDKLLILPKFLLAKDSEITLEEKKQALTLTNYFFNRYLFHNN 119 Query: 222 IIHCHLLRENFLGKLLEL 239 RE F+ + + Sbjct: 120 --RQVKAREEFIEYITNI 135 >gi|320534193|ref|ZP_08034719.1| DNA repair protein RecO [Actinomyces sp. oral taxon 171 str. F0337] gi|320133588|gb|EFW26010.1| DNA repair protein RecO [Actinomyces sp. oral taxon 171 str. F0337] Length = 171 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 58/163 (35%), Gaps = 12/163 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++D+AIIL GE + I+ ++TR +G+ + + R L+ ++ V + Sbjct: 6 YRDEAIILRTYKLGEADRIIVMLTRHHGQVRAVAKGVRRTTSRFGARLEPFSMTDVQLHA 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER-----EPCLELYDMLN 115 + ++ + A ++F + R + E + + +L Sbjct: 66 GRSLDVVTQAEIIDPFGRAVSADYAMFTCASTMVETAERLSADDGDLGTEASPQQFLLLA 125 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTG 155 L + ++ LL+ + G+ C + G Sbjct: 126 GALAAMSHRRHAPGL--ILDSYLLRALALGGWAPSCYDCALCG 166 >gi|312890249|ref|ZP_07749790.1| DNA repair protein RecO [Mucilaginibacter paludis DSM 18603] gi|311297361|gb|EFQ74489.1| DNA repair protein RecO [Mucilaginibacter paludis DSM 18603] Length = 241 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 72/208 (34%), Gaps = 7/208 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+ +YGE ++I++V T ++G V + R + +LQ L+ + Sbjct: 1 MLHKTRGIVFKTTNYGESSVIVQVYTEKFGLQSYIVNGVKKPRAKISRNMLQPLYLLDMV 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYG-LQSIVPLFRFLPEREPCLELYDMLNI 116 + N+ + + L L++ + ++ L++ + Sbjct: 61 VYHKATGNVQRIAELKNSPVLQSIPYDMIKTSIVLFLNEVLYKAVKHQDTDENLFNFIFH 120 Query: 117 FLNCHKIPSVI-GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ--DLLWVSPKSGGAVCR 173 + + + L L + +GF ++ + + D ++ K A+ Sbjct: 121 GIEWLEHQQEGLANFHLLFLLKLTRYMGFYPEVNQDINADFFDMKDGVFKRYKPDHALYL 180 Query: 174 SVGLPYAEKMLVLPSFLWKEEQTIDADS 201 S L+ SF ++ + D Sbjct: 181 SPPHTQNFNKLLQYSFENMQQLKLSNDE 208 >gi|253568815|ref|ZP_04846225.1| DNA repair protein [Bacteroides sp. 1_1_6] gi|251840834|gb|EES68915.1| DNA repair protein [Bacteroides sp. 1_1_6] Length = 242 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 53/191 (27%), Gaps = 5/191 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L Y + +II+++ T GR V +S + + Q + + Sbjct: 1 MLQKTKGIVLHTLKYNDTSIIVDMYTELSGRTSFLVPVPRSRKAAVKSVLFQPLSFIEFE 60 Query: 58 WRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R L + + + L L+R + E L+ L Sbjct: 61 ADFRPNATLYRVKEAKSFYPFTSIPYDPYKSSMALFLAEFLYRAIREEAENRPLFAYLQH 120 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + + L + +G +L L + + S Sbjct: 121 SVIWLDECREGFANFHLVFLMRLSRFLGLYPNLEDYHTGDYFDLLNACFTSTRPQLHSSY 180 Query: 176 GLPYAEKMLVL 186 P L Sbjct: 181 INPEEAGRLRQ 191 >gi|223985699|ref|ZP_03635746.1| hypothetical protein HOLDEFILI_03052 [Holdemania filiformis DSM 12042] gi|223962310|gb|EEF66775.1| hypothetical protein HOLDEFILI_03052 [Holdemania filiformis DSM 12042] Length = 250 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 61/160 (38%), Gaps = 7/160 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRLA 63 +A+IL + Y E + ++ V+++ YG+ R + + L + + + Sbjct: 7 EAVILKQQDYRENDALITVLSKDYGKLGFVCRGIRKMASKNAVSCMPFVLSELMFDYKEQ 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCL-----ELYDMLNIFL 118 L + + + + + Q + + L E+ E+Y++L++ L Sbjct: 67 ATLFSLKSARVLAAHRHIREDLEKMTIAQVMCEIADKLLEQGESDLEAAGEVYELLSVSL 126 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 + + I Q + LK G + +CV+ TQ Sbjct: 127 DRLDSETDSYLILAQFTALALKTEGIEPVVDECVLCSNTQ 166 >gi|259503182|ref|ZP_05746084.1| recombination protein O [Lactobacillus antri DSM 16041] gi|259168839|gb|EEW53334.1| recombination protein O [Lactobacillus antri DSM 16041] Length = 268 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 55/172 (31%), Gaps = 2/172 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSRLA 63 II+ R Y E++++++++T + G + +VR+ + R+ L Sbjct: 16 RGIIIYRRDYRERDLLIKILTDRIGPAMFYVRDAKKRGFRLAGDLLPFTHGSYIGSLADN 75 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + S Y + + +P +D + L Sbjct: 76 GLSFINAASETHQYRHIAGDLSKNAYATYILALADHAFADGQPLGGWFDQVAAALALIDH 135 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + IE LL G +CV+ G L S + GG +C Sbjct: 136 GQDEQVVTNVIETQLLTVFGVAPTWDRCVICGRADRPLDFSEQYGGMLCSQH 187 >gi|312793588|ref|YP_004026511.1| DNA repair protein reco [Caldicellulosiruptor kristjanssonii 177R1B] gi|312875915|ref|ZP_07735905.1| DNA repair protein RecO [Caldicellulosiruptor lactoaceticus 6A] gi|311797396|gb|EFR13735.1| DNA repair protein RecO [Caldicellulosiruptor lactoaceticus 6A] gi|312180728|gb|ADQ40898.1| DNA repair protein RecO [Caldicellulosiruptor kristjanssonii 177R1B] Length = 244 Score = 71.8 bits (174), Expect = 9e-11, Method: Composition-based stats. Identities = 30/187 (16%), Positives = 59/187 (31%), Gaps = 3/187 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 + I+L ++ E + IL V+T +G+ +N + + + Q R Sbjct: 4 IKTKGIVLKETNFEESSKILTVLTSDFGKIQVLSKNCRRLLSVLSAVSQPLMFCEFVIR- 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + V+ES +L +Y I + FL + ++ +L L Sbjct: 63 KTKDIYSISSASVIESFFELSQDVNLAIYSGYLIELVDSFLEFEQKNEDVLRLLLNSLYL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 K + E+ +L GF T+CV G + Sbjct: 123 LKKGKDPEVVSRIFEIKILVYTGFFPQFTQCVKCQRKDITRAFFSFKNGGLTCEACKEDN 182 Query: 181 EKMLVLP 187 + + + Sbjct: 183 DIEIEIE 189 >gi|297590890|ref|ZP_06949528.1| recombination protein O [Staphylococcus aureus subsp. aureus MN8] gi|297575776|gb|EFH94492.1| recombination protein O [Staphylococcus aureus subsp. aureus MN8] gi|315195468|gb|EFU25855.1| putative recombination protein O [Staphylococcus aureus subsp. aureus CGS00] Length = 248 Score = 71.8 bits (174), Expect = 9e-11, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 63/181 (34%), Gaps = 3/181 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + II+ YGE + I+ ++ + R + + Q V + Sbjct: 2 RQKGIIIKAVDYGESDKIITILNEHGAKVPLMARRAKKVKTGLQAQTQLFVYGLFIYNKW 61 Query: 64 QNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + +G +V+ H + + Y + + R + E + Y +L L + Sbjct: 62 RGMGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDEGDVAPYNYQLLQFVLEKIE 121 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVCRSVGLPYA 180 + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 122 SGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKYDGAISRQEASKDV 181 Query: 181 E 181 Sbjct: 182 H 182 >gi|167759229|ref|ZP_02431356.1| hypothetical protein CLOSCI_01576 [Clostridium scindens ATCC 35704] gi|167663103|gb|EDS07233.1| hypothetical protein CLOSCI_01576 [Clostridium scindens ATCC 35704] Length = 247 Score = 71.4 bits (173), Expect = 9e-11, Method: Composition-based stats. Identities = 26/216 (12%), Positives = 59/216 (27%), Gaps = 3/216 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 ++L GE + + ++T++ G+ F R + + + Sbjct: 3 QVTVTGMVLKASPIGEYDRRVVILTKERGKITAFARGARRPNSSLVGVTSPFTFGEFMVY 62 Query: 62 LAQNLGEFRFEVLESHCA-KLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + ++ + + YG + + E + +L L Sbjct: 63 EGRTSFTLVSASVTNYFSELRIDVEGAYYGFYFLEFADYYAREYNDETQPLKLLYQTLRA 122 Query: 121 H-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + EL + G + KC+ G + S + GG VC + Sbjct: 123 LTNPHLDNRLVRYIYELKAVAINGEAPQVFKCICCGDRERPALFSVRKGGLVCSACSGRI 182 Query: 180 -AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLN 214 L + + F + + L Sbjct: 183 TDGMALKTSTLYAMQYIISSNIEKLYTFTVKEEILE 218 >gi|330997805|ref|ZP_08321640.1| DNA repair protein RecO [Paraprevotella xylaniphila YIT 11841] gi|329569693|gb|EGG51458.1| DNA repair protein RecO [Paraprevotella xylaniphila YIT 11841] Length = 285 Score = 71.4 bits (173), Expect = 9e-11, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 50/155 (32%), Gaps = 5/155 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + ++L Y + ++I+++ T G V+ +S + + +++ ++ Sbjct: 45 MQEKTQGVVLRTLKYNDNSLIVDIYTAIRGTVSFMVKLPKSRKAALKGVFFRPLSILEID 104 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNI 116 + R L R + L L L R L E L+ + Sbjct: 105 FDYRQKSALQRIRDVRFKYVYQTLPYDPRKSSMALFLAEFLCRVLKHEEGSDTLFSYILY 164 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTK 150 L F L + +GF ++ + Sbjct: 165 SLQWLDASGEGFSNFHLVFLTRLTRFLGFYPNVEE 199 >gi|168704036|ref|ZP_02736313.1| probable DNA repair protein recO [Gemmata obscuriglobus UQM 2246] Length = 308 Score = 71.4 bits (173), Expect = 9e-11, Method: Composition-based stats. Identities = 18/117 (15%), Positives = 37/117 (31%), Gaps = 2/117 (1%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVNWRSRLAQ 64 AI+ + E + I + TR++G+ + G+ + + V + + + Sbjct: 8 AIVTRGTDWSETSRITTLFTREFGKIRALAKGGRRLKSNFDVAFDLLTVCEVVFIRKASG 67 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + E A + G L L + +P L+D L Sbjct: 68 LELLTEARMNEQFPALRKNLPALYAGYYVAELLAEGLQDYDPHPVLFDAALAILRAL 124 >gi|239631409|ref|ZP_04674440.1| DNA repair protein recO [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239525874|gb|EEQ64875.1| DNA repair protein recO [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 259 Score = 71.4 bits (173), Expect = 9e-11, Method: Composition-based stats. Identities = 28/199 (14%), Positives = 70/199 (35%), Gaps = 4/199 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS--RLA 63 + +++ ++Y E +++++++T ++G+ + + + ++ R + Sbjct: 9 EGLVMSRQNYRESDMLVKILTDRFGKKMFLLNRARKPGFTLGAGILPFTHADYIGEVRES 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + +L Y + P+ P ++ + L Sbjct: 69 GLSYLSAIKNATQYRQISDDITLNAYAAYIFGLIDLAFPDGRPVGFWFNQIKQALYLIDS 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I IE+ +LK G + CV+ G L S GG +C++ ++ Sbjct: 129 GLDPQIIANVIEVQMLKEYGVEPNWRGCVIDGRADLPLDFSESYGGLLCQNHWDKDPHRL 188 Query: 184 LVLPS--FLWKEEQTIDAD 200 P F + T+D + Sbjct: 189 HASPRAIFYLRRFSTLDLN 207 >gi|118462249|ref|YP_881252.1| DNA repair protein RecO [Mycobacterium avium 104] gi|118163536|gb|ABK64433.1| DNA repair protein RecO [Mycobacterium avium 104] Length = 256 Score = 71.4 bits (173), Expect = 9e-11, Method: Composition-based stats. Identities = 21/171 (12%), Positives = 50/171 (29%), Gaps = 6/171 (3%) Query: 10 LGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLAQNLG 67 L GE + I+ ++TR +G + + + L+ + Sbjct: 2 LRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDAQLHP-GRNLDI 60 Query: 68 EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI 127 + +++ ++S +++ L E + Sbjct: 61 VTQVVSIDAFATDIVSDYGRYTCACAMLETAERLAGEERAPAPALHGLTVSALRAVADGR 120 Query: 128 GKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + ++ LL+ + G+ LT+C +GG+VC Sbjct: 121 RSRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHVGAGGSVCPHC 171 >gi|88195374|ref|YP_500178.1| hypothetical protein SAOUHSC_01667 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|284024625|ref|ZP_06379023.1| hypothetical protein Saura13_08540 [Staphylococcus aureus subsp. aureus 132] gi|87202932|gb|ABD30742.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|269941056|emb|CBI49440.1| putative recombination protein O [Staphylococcus aureus subsp. aureus TW20] gi|302751397|gb|ADL65574.1| putative recombinational DNA repair protein (RecF pathway) [Staphylococcus aureus subsp. aureus str. JKD6008] gi|315198739|gb|EFU29067.1| hypothetical protein CGSSa01_09464 [Staphylococcus aureus subsp. aureus CGS01] gi|320140549|gb|EFW32403.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus MRSA131] gi|320144086|gb|EFW35855.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus MRSA177] gi|329314242|gb|AEB88655.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus T0131] Length = 248 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 63/181 (34%), Gaps = 3/181 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + II+ YGE + I+ ++ + R + + Q V + Sbjct: 2 RQKGIIIKAVDYGESDKIITILNEHGAKVPLMARRAKKVKTGLQAQTQLFVYGLFIYNQW 61 Query: 64 QNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + +G +V+ H + + Y + + R + E + Y +L L + Sbjct: 62 RGMGTLNSVDVISQHYKLQMDLYVSSYAALAAETIERSMDEGDIAPYNYQLLQFVLEKIE 121 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVCRSVGLPYA 180 + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 122 SGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGAISRQEASKDV 181 Query: 181 E 181 Sbjct: 182 H 182 >gi|323340795|ref|ZP_08081047.1| recombination protein O [Lactobacillus ruminis ATCC 25644] gi|323091918|gb|EFZ34538.1| recombination protein O [Lactobacillus ruminis ATCC 25644] Length = 264 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 23/172 (13%), Positives = 57/172 (33%), Gaps = 3/172 (1%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR-LAQN 65 I++ R Y E++++++++T +YG ++R + + + Sbjct: 11 GIVVSKRDYKERDLLVKILTNRYGYKTFYIRGAKKRGFRLGAIILPFSHGRYLGSINDDG 70 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC--LELYDMLNIFLNCHKI 123 L + + + ++ L + + + Y + L Sbjct: 71 LSYLSTGKEIDQYQNIFNDIMLNAYASYVLGLGEAAIKDDCILASQWYRKIERALQLIDQ 130 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 I +E+ +L+ G + C V G + S GG +C++ Sbjct: 131 GVNPLIIVSIMEIQMLELFGVAPEWRFCAVCGNQRSSFDYSESYGGILCKNH 182 >gi|212696009|ref|ZP_03304137.1| hypothetical protein ANHYDRO_00545 [Anaerococcus hydrogenalis DSM 7454] gi|212676996|gb|EEB36603.1| hypothetical protein ANHYDRO_00545 [Anaerococcus hydrogenalis DSM 7454] Length = 224 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 64/176 (36%), Gaps = 8/176 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SRLAQ 64 + +L +Y E + I+E+ T+ G+ + + + + V+ ++ + Sbjct: 10 EGFVLREFTYKESSKIIEIFTKNMGKISVIAKGVLNKKNTNLSSTQRFVKASYNLYKSGD 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + L +K + + +I L + + +Y++L+ + Sbjct: 70 KFFGIKDASLIKSYSKSNKNFDIIVYKSAICDLLLRTIDFDQKELVYNLLDKTFESFEKA 129 Query: 125 SVIGKIFVQIELMLLKNI---GFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCRSV 175 LLK I GF +L C + G + + ++ S + GG VC S Sbjct: 130 --SENYLNIFLCFLLKYISFSGFKPNLKGCSICGENIKPNYVYFSIEDGGVVCNSC 183 >gi|189464546|ref|ZP_03013331.1| hypothetical protein BACINT_00888 [Bacteroides intestinalis DSM 17393] gi|189438336|gb|EDV07321.1| hypothetical protein BACINT_00888 [Bacteroides intestinalis DSM 17393] Length = 245 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 24/169 (14%), Positives = 50/169 (29%), Gaps = 5/169 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L Y + ++I ++ T GR V+ +S + + Q LV + Sbjct: 1 MLQKTLGIVLHTLKYNDTSLIADIYTEVVGRASFIVKIPRSRKAAVKPVLFQPLALVELE 60 Query: 58 WRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R ++ + + + L L+R + E L+ L Sbjct: 61 ADFRPNASIYKITEAKSFYPFSSIPYDPYKSSIALFLAEFLYRAVREEAENRPLFAYLQH 120 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVS 164 + + + L + +G +L L Sbjct: 121 SIIWLDECRDNFANFHLVFLMRLSRFLGLYPNLEDYQKGDYFDMLNACF 169 >gi|308048451|ref|YP_003912017.1| DNA repair protein RecO [Ferrimonas balearica DSM 9799] gi|307630641|gb|ADN74943.1| DNA repair protein RecO [Ferrimonas balearica DSM 9799] Length = 241 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 36/232 (15%), Positives = 69/232 (29%), Gaps = 15/232 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVR--NGQSHRMQPILQAGNLVRVNWRSRLA 63 A +L R Y E +++L++++ +GR R + LQ + ++ R Sbjct: 9 RAYLLHARPYRESSLLLDLLSETHGRVAAVARVGGKTGGARKAQLQPFRPLMISLSGRST 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 ++ L+ GL R L E +P L+D + L Sbjct: 69 LRT---LAQLEAPTLPMPLNGQRLFAGLYLNELCQRLLREWQPLDGLFDHYHEALLGLAG 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVS-PKSGGAVCRSVGLPYAEK 182 + + + E LL +G + + G V R Sbjct: 126 ETPMEPHLREFERALLDLLGVLPPPGEDADGVALMAEARYAWQPQQGWVLRGAAGSGYSG 185 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFL 233 +L + + + +K A + L+ + R FL Sbjct: 186 DSLLQWQQQRLQTPQAMNEIKRA--------VRELLRPLLGDKPLHSRTLFL 229 >gi|210617162|ref|ZP_03291429.1| hypothetical protein CLONEX_03651 [Clostridium nexile DSM 1787] gi|210149437|gb|EEA80446.1| hypothetical protein CLONEX_03651 [Clostridium nexile DSM 1787] Length = 242 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 55/177 (31%), Gaps = 2/177 (1%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 +IL GE + + ++T++ G+ F + + + + ++ Sbjct: 2 GMILSASPIGENDKRIVILTKEKGKISAFAKGARRQNSHLLGATNPFSFGEFVLYEGRSS 61 Query: 67 GEFRFEVLESHCAKL-LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH-KIP 124 + ++ +L YG + + E ++ +L L Sbjct: 62 YNLMQANISNYFMELATDLEGAYYGFYFMEFADYYTKEHNDERQMLRLLYQTLRALSSNK 121 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 + EL L G D+ C G + + S ++ G VC ++ Sbjct: 122 IPRELVRYIFELKTLVVNGEYPDVFHCTGCGAQEQGVLFSSRNRGIVCEKCRRTVSD 178 >gi|291522459|emb|CBK80752.1| DNA replication and repair protein RecO [Coprococcus catus GD/7] Length = 250 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 25/185 (13%), Positives = 61/185 (32%), Gaps = 2/185 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 +++ + GE + + ++T++ G+ GF R + + A V + ++ Sbjct: 8 TGMVISTMAVGEYDKRVVILTKERGKIHGFARGAKRPGNSLMAAAQPFVFGEFMLLEGRS 67 Query: 66 LGEFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + ++ + YG + + E LE+ +L + Sbjct: 68 AYTISSVKVMNYFEEFRKDMDATCYGCYFLEFADYYGRENADDLEMLKLLYQTVRALCKK 127 Query: 125 SV-IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 ++ I EL ++ G +C T++L S + G +C Sbjct: 128 TIAYPLIRCIYELKIMAVNGECPQCFECACCHTTENLSVFSARYRGLLCEKCAGHEKMTT 187 Query: 184 LVLPS 188 + + Sbjct: 188 ISISP 192 >gi|300866448|ref|ZP_07111140.1| DNA repair protein recO [Oscillatoria sp. PCC 6506] gi|300335552|emb|CBN56300.1| DNA repair protein recO [Oscillatoria sp. PCC 6506] Length = 306 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 30/210 (14%), Positives = 63/210 (30%), Gaps = 11/210 (5%) Query: 1 MY--WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRV 56 M ++ I L GE + +L ++TR++G + R + + + Sbjct: 1 MNRTYKATGINLKSMPMGEHDRLLTILTREFGLIRAVAPGVRKQRSHLGGRSELFVVNEL 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 ++ + E +ES+ G + +P EL+ +LN Sbjct: 61 LL-AKGRSLDKITQAETIESYSGLSRDLGKLASGQYLAELVLTQALSEQPQEELFSLLNE 119 Query: 117 FLNCHKIPSVIGK------IFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 L+ + LL G + C +T + + P Sbjct: 120 HLSRLERLPRKTDSKTVVAHLAHGIFHLLALGGIAPQVQVCGITQRPLNPNFTDPDWQVG 179 Query: 171 VCRSVGLPYAEKMLVLPSFLWKEEQTIDAD 200 S G + L + ++I+ + Sbjct: 180 FSISDGGTISLSELASLEIKQQGNESIEKE 209 >gi|225010218|ref|ZP_03700690.1| DNA repair protein RecO [Flavobacteria bacterium MS024-3C] gi|225005697|gb|EEG43647.1| DNA repair protein RecO [Flavobacteria bacterium MS024-3C] Length = 239 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 59/202 (29%), Gaps = 7/202 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM----QPILQAGNLVRV 56 M AI+L YG+ ++I+++ T G + S + + + + + Sbjct: 1 MQQTTKAIVLKTIKYGDNSLIVKLYTASSGLKSYMLNGVLSRKKGKFNKAHFLPLSQLEI 60 Query: 57 NWRSRLAQNLGEFRFEVL-ESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + R NL L + + + L L + E EL+ + Sbjct: 61 VAQHRDKGNLERLIEAKLSYPYQSAHTHMAKNAIVLFLSEFLSNAIQEETENKELFSFIE 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 L I + + + K GF DL+ S + + Sbjct: 121 TALQWLDNEDQIANFHLFFLVEISKYFGFYPSDNHMDSPYF--DLVEGDFCSHAGLNPHM 178 Query: 176 GLPYAEKMLVLPSFLWKEEQTI 197 G P + + + I Sbjct: 179 GEPEISFFKSILGINFDKLNDI 200 >gi|227534996|ref|ZP_03965045.1| recombination protein RecO [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187387|gb|EEI67454.1| recombination protein RecO [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 259 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 28/199 (14%), Positives = 70/199 (35%), Gaps = 4/199 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS--RLA 63 + +++ ++Y E +++++++T ++G+ + + + ++ R + Sbjct: 9 EGLVMSRQNYRESDMLVKILTDRFGKKMFLLNRARKPGFTLGAGILPFTHADYIGEVRES 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + +L Y + P+ P ++ + L Sbjct: 69 GLSYLSAIKNATQYRQISDDITLNAYAAYIFGLIDLAFPDGRPVGFWFNQIKQALYLIDS 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I IE+ +LK G + CV+ G L S GG +C++ ++ Sbjct: 129 GLDPQIIANVIEVQMLKEYGVEPNWRGCVIDGRADLPLDFSESYGGLLCQNHWDKDPHRL 188 Query: 184 LVLPS--FLWKEEQTIDAD 200 P F + T+D + Sbjct: 189 HASPRAIFYLRRFSTLDLN 207 >gi|282880623|ref|ZP_06289329.1| DNA repair protein RecO [Prevotella timonensis CRIS 5C-B1] gi|281305518|gb|EFA97572.1| DNA repair protein RecO [Prevotella timonensis CRIS 5C-B1] Length = 241 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 21/163 (12%), Positives = 54/163 (33%), Gaps = 5/163 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + +AI+L YG+ +I+++ T + G R ++ + Q + + Sbjct: 1 MLVKTEAIVLRALKYGDAQLIVDLFTERMGCVTFIHRVKKTKHGRIGVQFFQPLTHLEIE 60 Query: 58 WRS-RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + + + ++ + + + L L++ + + LY + Sbjct: 61 YDALHNGRLPRLKEVRMVNPYLSIPFDALKLSISLFIAEFLYQCVKGEQASGALYQYVTT 120 Query: 117 FLNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 ++ + + L L + IGF +L Sbjct: 121 SVHWLDAATAGFANFHLVFMLHLTRFIGFYPNLEDDTGHDFFD 163 >gi|242279454|ref|YP_002991583.1| DNA repair protein RecO [Desulfovibrio salexigens DSM 2638] gi|259563676|sp|C6BV69|RECO_DESAD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|242122348|gb|ACS80044.1| DNA repair protein RecO [Desulfovibrio salexigens DSM 2638] Length = 246 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 20/159 (12%), Positives = 48/159 (30%), Gaps = 3/159 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRV-N 57 M + +IL + E ++ + ++ G F G R + L+ + V Sbjct: 1 MELTEKVVILKTGKFKENDLWVRFLSATRGVQNAFAFGGSRSRRRFGGCLEPFSQVLFKT 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 ++ +++ + + + ER+ ++D+L Sbjct: 61 GTNKTGTYQVLQEGSLVKGYPGIRSDFRKMGLAANCFKFIESAVLERDGNRAVFDLLTET 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 L+ + + + G+ D T C G Sbjct: 121 LDVIEEADPDDFFPLFFRAKVAFEQGYNPDFTICAQCGK 159 >gi|296394229|ref|YP_003659113.1| DNA repair protein RecO [Segniliparus rotundus DSM 44985] gi|296181376|gb|ADG98282.1| DNA repair protein RecO [Segniliparus rotundus DSM 44985] Length = 247 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 25/178 (14%), Positives = 62/178 (34%), Gaps = 6/178 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 ++D ++L GE + I+ ++TR++G + + + L+ + V V Sbjct: 4 YRDVGVVLRNHQLGEADRIVALLTREHGVVRAVAKGVRRTRSKFGARLEPFSCVDVQLYQ 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + ++ + L+++ ++ + +I+ L + Sbjct: 64 GRSLDV-ITQAMTLDANSEEITADYGKYTTGCAILETATLLAGPQGAPAQQLHTLTRGAL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + + L+ + G+ L C G +P++GGAVC Sbjct: 123 VALRKGEKPRDLILSAFFLRAMGHAGWMPALVDCARCGAQGPHRAFNPRAGGAVCPLC 180 >gi|304380845|ref|ZP_07363505.1| recombination protein O [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|304340572|gb|EFM06506.1| recombination protein O [Staphylococcus aureus subsp. aureus ATCC BAA-39] Length = 248 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 63/181 (34%), Gaps = 3/181 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + II+ YGE + I+ ++ + R + + Q V + Sbjct: 2 RQKGIIIKAVDYGESDKIITILNEHGAKVPLMARRAKKVKTGLQAQTQLFVYGLFIYNQW 61 Query: 64 QNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + +G +V+ H + + Y + + R + E + Y +L L + Sbjct: 62 RGMGTLNSVDVISQHYKLQMDLYVSSYAALAAETIERSMDEGDIAPYNYQLLQFVLEKIE 121 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVCRSVGLPYA 180 + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 122 SGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGAISRQEASKDV 181 Query: 181 E 181 Sbjct: 182 H 182 >gi|325849578|ref|ZP_08170816.1| DNA repair protein RecO [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480059|gb|EGC83136.1| DNA repair protein RecO [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 252 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 66/176 (37%), Gaps = 8/176 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SRLAQ 64 + +L +Y E + I+E+ T+ G+ + + + + V+ ++ + + Sbjct: 10 EGFVLREFTYKESSKIIEIFTKNMGKISVIAKGVLNKKNTNLSSTQRFVKASYNLYKSGE 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + L +K + + +I L + + +Y++L+ + Sbjct: 70 KFFGIKDASLIKSYSKSNKNFDIIVYKSAICDLLLRTIDFDQKELVYNLLDKTFESFEKA 129 Query: 125 SVIGKIFVQIELMLLKNI---GFGLDLTKCVVTG--VTQDLLWVSPKSGGAVCRSV 175 LLK I GF +L +C + G + + ++ S + GG VC S Sbjct: 130 --SENYLNIFLCFLLKYISFSGFKPNLKECSICGENIKPNYVYFSIEDGGVVCNSC 183 >gi|291524970|emb|CBK90557.1| DNA replication and repair protein RecO [Eubacterium rectale DSM 17629] Length = 242 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 60/179 (33%), Gaps = 2/179 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++L G+ + + ++T++ G+ F R + Q + + + +N Sbjct: 8 TGMVLSAMPVGDFDKRITILTKERGKITAFARGARRPNSQLMAGSNPFSFGEFELFEGKN 67 Query: 66 LGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + ++ +L +Y G + F E ++ +L L + P Sbjct: 68 AYSLSKVTISNYFRELTQDLEAVYTGFYFLEFCGYFCQENNDEKDMLKLLYQSLRALESP 127 Query: 125 -SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + EL + G G L C+ + L S + GG C + G + Sbjct: 128 AYKNELVRAVFELKAITINGEGPLLFSCIHCHSREGLNVFSARRGGVFCDNCGTQVQGR 186 >gi|320529425|ref|ZP_08030513.1| DNA repair protein RecO [Selenomonas artemidis F0399] gi|320138391|gb|EFW30285.1| DNA repair protein RecO [Selenomonas artemidis F0399] Length = 242 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 70/202 (34%), Gaps = 3/202 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + + IILG +++GE + ++ V TR+ G + R V +++ Sbjct: 1 MLYTAEGIILGAKNWGEADKVMTVFTRERGMLRAAAFGCRRPRSALAGAMQMFVHADFQL 60 Query: 61 RLAQNLGEFRFEVLESHCAKLL-SSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 L + V+ +H AKL + Y + FLPE P + +D L L Sbjct: 61 AEGPRLETVKTAVVRAHHAKLSADLTALAYATFVAEVVREFLPEGVPDEQFFDRLAQILT 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLWVSPKSGGAVCRSVGLP 178 + + + +L G G +C+ G + + GGA+C Sbjct: 121 AFETRNPRITALAAVLQ-ILSAAGLGQTYERCLHCGTEITGNAFFHAREGGALCAGCRTA 179 Query: 179 YAEKMLVLPSFLWKEEQTIDAD 200 AE L D Sbjct: 180 DAEDFPAELRELLTGLGAFDWA 201 >gi|148268050|ref|YP_001246993.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus JH9] gi|150394118|ref|YP_001316793.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus JH1] gi|253316041|ref|ZP_04839254.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253732219|ref|ZP_04866384.1| recombination protein RecO [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733184|ref|ZP_04867349.1| recombination protein RecO [Staphylococcus aureus subsp. aureus TCH130] gi|255006352|ref|ZP_05144953.2| DNA repair protein RecO [Staphylococcus aureus subsp. aureus Mu50-omega] gi|269203194|ref|YP_003282463.1| RecO family DNA repair protein [Staphylococcus aureus subsp. aureus ED98] gi|296275812|ref|ZP_06858319.1| DNA repair protein recO [Staphylococcus aureus subsp. aureus MR1] gi|147741119|gb|ABQ49417.1| DNA replication and repair protein RecO [Staphylococcus aureus subsp. aureus JH9] gi|149946570|gb|ABR52506.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus JH1] gi|253724008|gb|EES92737.1| recombination protein RecO [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728724|gb|EES97453.1| recombination protein RecO [Staphylococcus aureus subsp. aureus TCH130] gi|262075484|gb|ACY11457.1| RecO family DNA repair protein [Staphylococcus aureus subsp. aureus ED98] gi|312829954|emb|CBX34796.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129844|gb|EFT85834.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus CGS03] Length = 248 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 63/181 (34%), Gaps = 3/181 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + II+ YGE + I+ ++ + R + + Q V + Sbjct: 2 RQKGIIIKAVDYGESDKIITILNEHGAKVPLMARRAKKVKTGLQAQTQLFVYGLFIYNQW 61 Query: 64 QNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + +G +V+ H + + Y + + R + E + Y +L L + Sbjct: 62 RGMGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDEGDIAPYNYQLLQFVLEKIE 121 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVCRSVGLPYA 180 + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 122 SGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGAISRQEASKDV 181 Query: 181 E 181 Sbjct: 182 H 182 >gi|298694848|gb|ADI98070.1| probable recombination protein [Staphylococcus aureus subsp. aureus ED133] Length = 248 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 63/181 (34%), Gaps = 3/181 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + II+ YGE + I+ ++ + R + + Q V + Sbjct: 2 RQKGIIIKAVDYGESDKIITILNEHGAKVPLMARRAKKVKTGLQAQTQLFVYGLFIYNQW 61 Query: 64 QNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + +G +V+ H + + Y + + R + E + Y +L L + Sbjct: 62 RGMGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDEGDIAPYNYQLLQFVLEKIE 121 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVCRSVGLPYA 180 + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 122 SGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGAISRQEASKDV 181 Query: 181 E 181 Sbjct: 182 H 182 >gi|311748757|ref|ZP_07722542.1| DNA repair protein RecO [Algoriphagus sp. PR1] gi|126577291|gb|EAZ81539.1| DNA repair protein RecO [Algoriphagus sp. PR1] Length = 229 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 5/152 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVR----V 56 M + I+L Y E +II+++ TR+ G V +S + + + + V Sbjct: 1 MLHKTKGIVLSYFRYKETSIIVKIFTRELGLKPYLVNGVRSQKSKSKIALYQPMTLLDLV 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + + ++ ++ + L + R + E L+D L++ Sbjct: 61 VYNKENSGLQRISEAKLAKAQQLTPFDFNRTGLALFMTEIVSRSIFENYQNEHLFDFLSM 120 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLD 147 + K F + K +GF D Sbjct: 121 SILVLDQKDTSLKHFPLVFLMEQAKYLGFAPD 152 >gi|120437510|ref|YP_863196.1| DNA repair protein RecO [Gramella forsetii KT0803] gi|254764634|sp|A0M684|RECO_GRAFK RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|117579660|emb|CAL68129.1| DNA repair protein RecO [Gramella forsetii KT0803] Length = 239 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 28/222 (12%), Positives = 61/222 (27%), Gaps = 5/222 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR----MQPILQAGNLVRV 56 M AII+ YGE ++I++ T G ++ R + Q+ + + Sbjct: 1 MLIHTKAIIISALKYGEADLIVKAYTLSDGLCTYMLKGVLKSRKGKFKASMFQSLTQLEI 60 Query: 57 NWRSRLAQNLGEFRFEVLE-SHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 R + + + ++ + + L + E E L+ L Sbjct: 61 VANHRGGGKMEYLKEAKVTGNYQSLHTHPIKLAMVMFLAEMLRNAIREEESNEPLFHYLE 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 I + L L + +GF ++ + S C Sbjct: 121 YSFQFLDSTDKIANFHLLFLLNLTRYLGFQPEMGIKDLPVFNLLDGIFQDFSSNDYCIEG 180 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYA 217 K + F + ++ S + + + Sbjct: 181 KNVDLLKSFLGTDFDALQYIKMNQTSRNDFLSMLLLYYELHI 222 >gi|302871792|ref|YP_003840428.1| DNA repair protein RecO [Caldicellulosiruptor obsidiansis OB47] gi|302574651|gb|ADL42442.1| DNA repair protein RecO [Caldicellulosiruptor obsidiansis OB47] Length = 244 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 53/158 (33%), Gaps = 3/158 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 + I+L ++ E + IL V T +G+ +N + + + Q R Sbjct: 4 IKTKGIVLKEINFEESSKILTVFTSDFGKIQVLSKNCKRLLSVLSAVSQPLMYCEFVIR- 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + V+ES +L +Y I + FL + ++ +L L Sbjct: 63 KTKDIFSISSASVIESFFELSQDVNLAIYSGYLIELVDSFLEFEQKNEDVLRLLLNSLYL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 K + E+ +L GF T+CV Sbjct: 123 LKKGKDPEVVSRIFEIKILVYTGFFPQFTQCVKCQRKD 160 >gi|222111789|ref|YP_002554053.1| DNA repair protein Reco [Acidovorax ebreus TPSY] gi|254790520|sp|B9MDP4|RECO_DIAST RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|221731233|gb|ACM34053.1| DNA repair protein RecO [Acidovorax ebreus TPSY] Length = 262 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 48/138 (34%), Gaps = 3/138 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSR 61 + A +L + + ++ILE TR YGR + + +P+L +RV + Sbjct: 8 DEPAYVLHSYDWSDSSLILETFTRHYGRVALVAKGAKKPTSNFRPVLLPLQPLRVTYTLG 67 Query: 62 LAQNLGEFRFEV-LESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + + + + L GL L R L + L+D + Sbjct: 68 GEGHGEIHALKGAEWAGGHVMPTGDALLSGLYLNELLLRLLAREDTHAPLFDTYAGVVRV 127 Query: 121 HKIPSVIGKIFVQIELML 138 G+ +E +L Sbjct: 128 LATVDHEGEHGDALEPVL 145 >gi|227529167|ref|ZP_03959216.1| recombination protein O [Lactobacillus vaginalis ATCC 49540] gi|227350892|gb|EEJ41183.1| recombination protein O [Lactobacillus vaginalis ATCC 49540] Length = 256 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 59/172 (34%), Gaps = 2/172 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 II+ R Y E++++++++T + G + FV+ + + + L N Sbjct: 9 RGIIMFRRDYRERDLLVKILTDKIGPAMFFVKGAKKRGFRLAADILPFTHGEYIGSLTDN 68 Query: 66 --LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + S Y + + + + ++ + L+ Sbjct: 69 GLSFINTASDTSQYRSIASDISKNAYATYILALVDSAFQDGQGIGGWFNQVAAALDLINS 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 I IE LL G +CV+ G L S + GG +CR+ Sbjct: 129 GLDEQVIANVIETQLLVRFGVAPTWDRCVICGRDDLPLDFSEQYGGMLCRNH 180 >gi|241668235|ref|ZP_04755813.1| DNA repair protein RecO [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876770|ref|ZP_05249480.1| DNA repair protein recO [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842791|gb|EET21205.1| DNA repair protein recO [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 233 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 89/233 (38%), Gaps = 14/233 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLV--RVNWRSRLAQN 65 IL Y E ++++ + TR++G+ G +R + + + Q + +++ + Sbjct: 8 YILHQCKYQENSLLVSIFTREFGKISGLIR--VNKKTINLYQPLVKLRGQISLAKKSDGL 65 Query: 66 LGEFRFEVLES-HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + E +ES + ++ Y + I L + E E E Y + +N Sbjct: 66 SKIYNVEFVESFYQNTYINLLSLQYMNELIYLLLSYSHEEEFLFEKYGFILKNINEINYK 125 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 + EL LL ++G G+ + + + + L S + G +P + Sbjct: 126 ----YLLRMFELELLDSLGQGIYVDCDIDGMLIDESLNYSILTAGFKKNLSAIPNSIAGK 181 Query: 185 VLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 L + + + + LK+ ++T +++ YAL R+ + L Sbjct: 182 NLLK-INQSVSSWTDEDLKAISKVTRAYID-YALA---GKQLRSRKLLIDYLN 229 >gi|261366883|ref|ZP_05979766.1| DNA repair protein RecO [Subdoligranulum variabile DSM 15176] gi|282570997|gb|EFB76532.1| DNA repair protein RecO [Subdoligranulum variabile DSM 15176] Length = 247 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 24/184 (13%), Positives = 53/184 (28%), Gaps = 3/184 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M ++L GE + IL ++T + G + + + G + Sbjct: 1 MQIATTGLVLRQVKVGEADQILTLLTPELGVVSASAKGSLRLKNKLFSACGLFCYSEFSL 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLE--LYDMLNIFL 118 ++ ++ + S + + + L P + L +LN Sbjct: 61 TSGRSHYFVESAQVKKVFHGVSESVEAMSLATYMAEIVLSLSPAPPEADAQLRLLLNSLY 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ-DLLWVSPKSGGAVCRSVGL 177 + ++ EL + G+ +L C G + + P G +C Sbjct: 121 MIGLKKLSLRQLKTIYELRAMSMAGYQPNLLACSECGKYEGGEFYFDPVEGNLLCEECAD 180 Query: 178 PYAE 181 Sbjct: 181 KARH 184 >gi|56750569|ref|YP_171270.1| DNA repair protein RecO [Synechococcus elongatus PCC 6301] gi|81299793|ref|YP_400001.1| DNA repair protein RecO [Synechococcus elongatus PCC 7942] gi|62287376|sp|Q5N4L9|RECO_SYNP6 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|123557076|sp|Q31PK5|RECO_SYNE7 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|56685528|dbj|BAD78750.1| hypothetical protein [Synechococcus elongatus PCC 6301] gi|81168674|gb|ABB57014.1| DNA replication and repair protein RecO [Synechococcus elongatus PCC 7942] Length = 266 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 50/155 (32%), Gaps = 7/155 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLV---RVNWR 59 + AI+L GE + +L +++ G + R + + V + Sbjct: 5 YTTTAIVLKATPLGEADRLLTLLSPDQGLLRVVATGARKPRSKLGGRTALFVVGDCLIAC 64 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + L + E L SH A + + ER P EL+ +L L Sbjct: 65 GKSLDRL--QQVETLTSHTALSGDLARLAAAQYLTELVLAQALERHPQPELFALLCRDLA 122 Query: 120 CHKIPSVIGKIFVQIE--LMLLKNIGFGLDLTKCV 152 + S + + ++ LL G+ C Sbjct: 123 RIETQSGLEVLPYLLQSTWQLLAWAGWAPQTHYCC 157 >gi|297207715|ref|ZP_06924150.1| recombination protein O [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911796|ref|ZP_07129239.1| recombination protein O [Staphylococcus aureus subsp. aureus TCH70] gi|296887732|gb|EFH26630.1| recombination protein O [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300886042|gb|EFK81244.1| recombination protein O [Staphylococcus aureus subsp. aureus TCH70] Length = 248 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 63/181 (34%), Gaps = 3/181 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + II+ YGE + I+ ++ + R + + Q V + Sbjct: 2 RQKGIIIKAVDYGESDKIITILNEHGAKVPLMARRAKKVKTGLQAQTQLFVYGLFIYNQW 61 Query: 64 QNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + +G +V+ H + + Y + + R + E + Y +L L + Sbjct: 62 RGMGTLNSVDVISQHYKLQMDLFVSSYASLAAETIERSMDEGDIAPYNYQLLQFVLEKIE 121 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVCRSVGLPYA 180 + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 122 SGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGAISRQEASKDV 181 Query: 181 E 181 Sbjct: 182 H 182 >gi|282878005|ref|ZP_06286813.1| DNA repair protein RecO [Prevotella buccalis ATCC 35310] gi|281299840|gb|EFA92201.1| DNA repair protein RecO [Prevotella buccalis ATCC 35310] Length = 241 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 50/155 (32%), Gaps = 5/155 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR---NGQSHRMQPILQAGNLVRVN 57 M + AI+L YG+ +I ++ T+ G R +P Q ++ + Sbjct: 1 MLVKTQAIVLRTIKYGDSQLITDLFTQAMGNVSFIQRMRTGKGGRVGKPYFQPLTILDIE 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKL-LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R + L + L + + +S L L+ + LY + Sbjct: 61 FDERPNKQLQRIKEMRLAYPFSTIPFNSYKLSISLFLSEFLYFSVRGEHEVGALYQYVEN 120 Query: 117 FLNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTK 150 + + + L + IGF +L Sbjct: 121 SIRWLDSAEGAFANFHLVFMMHLTRFIGFYPNLEN 155 >gi|323440464|gb|EGA98176.1| recombination protein [Staphylococcus aureus O11] gi|323443238|gb|EGB00856.1| recombination protein [Staphylococcus aureus O46] Length = 248 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 64/181 (35%), Gaps = 3/181 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + II+ YGE + I+ ++ + R + + Q V + Sbjct: 2 RQKGIIIKAVDYGESDKIITILNEHGAKVPLMARRAKKVKTGLQAQTQLFVYGLFIYNQW 61 Query: 64 QNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + +G +V+ H + + Y + + R + E + Y +L+ L + Sbjct: 62 RGMGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDEGDIAPYNYQLLDFVLEKIE 121 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVCRSVGLPYA 180 + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 122 SGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGAISRQEASKDV 181 Query: 181 E 181 Sbjct: 182 H 182 >gi|298207087|ref|YP_003715266.1| possible DNA repair protein RecO [Croceibacter atlanticus HTCC2559] gi|83849721|gb|EAP87589.1| possible DNA repair protein RecO [Croceibacter atlanticus HTCC2559] Length = 238 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 62/205 (30%), Gaps = 4/205 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR----MQPILQAGNLVRV 56 M AI++ YGE ++I+++ T G +R + Q L+ V Sbjct: 1 MLVTTKAIVISALKYGEADLIVKLFTESSGLKSYLLRGILKSKRGKFRASQFQPLTLLEV 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + + L R + + L + L + + L R + E Sbjct: 61 VAKHKDKGTLETLRDAKILATYQTLHTDLLKSTVIMFLAELLRNAIQEEEKNPELFGFLE 120 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + L +GF + T + S + C S Sbjct: 121 TAFLWFDKYNSSNFHLLFLVKLSLFLGFYPEGTNKNASFFNLLDGTFQEVSTNSYCISGI 180 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADS 201 ++L+ +F EE ++ + Sbjct: 181 HKDTLELLLGINFDGLEELKLNQTN 205 >gi|298372573|ref|ZP_06982563.1| DNA repair protein RecO [Bacteroidetes oral taxon 274 str. F0058] gi|298275477|gb|EFI17028.1| DNA repair protein RecO [Bacteroidetes oral taxon 274 str. F0058] Length = 237 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 69/226 (30%), Gaps = 14/226 (6%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWR 59 M +AI+L +Y + I+ + +RQ G +R + +L+ + V + + Sbjct: 1 MLITTEAIVLNHIAYSDNKRIITLFSRQEGLLSAMLRSGNRKSTKVSLLEPFSTVEIIAK 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + L+ + + L L ++R + E+ LYD L+ ++ Sbjct: 61 RGNGSLVYINDISPLKIYKTIPFDAEKRLTTLFMAEVVYRTIREQYRDTSLYDFLDRTIS 120 Query: 120 CHKIPSVIGKIFVQIELMLLKN---IGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 V + LL+ +G + + + Sbjct: 121 LLDFTCD--NTLVFSLIFLLEYGRRLGIYPNTETYSEGAIFD---MQNGVFCRQTTHHEH 175 Query: 177 LPYAEKMLVLPSFLWKEEQTIDA-----DSLKSAFQLTDYFLNKYA 217 E +L FL ++ + D + + F + Sbjct: 176 FATEESSRILAQFLNEKTDSYDIGQYTRTQMIEILDIVVRFFELHL 221 >gi|332525371|ref|ZP_08401534.1| DNA replication and repair protein RecO [Rubrivivax benzoatilyticus JA2] gi|332108643|gb|EGJ09867.1| DNA replication and repair protein RecO [Rubrivivax benzoatilyticus JA2] Length = 251 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 6/145 (4%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRLAQN 65 +L + E ++I+E+ TR+ GR + + + +++P+L + V A Sbjct: 12 YVLHSWDWSETSLIVELFTRERGRVVVAAKGAKRPTSQLRPVLLPFQRIAVQLGRTPADE 71 Query: 66 LGEFRFEVLESHCAKLLSSS--LFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 E + L + L ++ +L+D L + Sbjct: 72 AAEIHTLRTAEWGGGVPPVPAAAMFSAFYCNELLMKLLARQDAYPQLFDAYAETLAA--L 129 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDL 148 + EL+LL+ G +L Sbjct: 130 AADEASALRAFELVLLRETGLLPEL 154 >gi|312437965|gb|ADQ77036.1| recombination protein O [Staphylococcus aureus subsp. aureus TCH60] Length = 248 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 63/181 (34%), Gaps = 3/181 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + II+ YGE + I+ ++ + R + + Q V + Sbjct: 2 RQKGIIIKAVDYGESDKIITILNEYGAKVPLMARRAKKVKTGLQAQTQLFVYGLFIYNKW 61 Query: 64 QNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + +G +V+ H + + Y + + R + E + Y +L L + Sbjct: 62 RGMGTLNSVDVISQHYKLQMDLYVSSYASLAAETIERSMDEGDVAPYNYQLLQFVLEKIE 121 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVCRSVGLPYA 180 + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 122 SGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKYDGAISRQEASKDV 181 Query: 181 E 181 Sbjct: 182 H 182 >gi|227498621|ref|ZP_03928765.1| DNA repair protein recO [Acidaminococcus sp. D21] gi|226904077|gb|EEH89995.1| DNA repair protein recO [Acidaminococcus sp. D21] Length = 247 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 66/201 (32%), Gaps = 7/201 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVNWRS 60 +QD+A+IL VR++ + R +G+ + I+Q +RV Sbjct: 6 FQDEAVILEVRNWQTADKYAVCFCRHHGKVPFIAYGAAYPKSTSGRIVQPFAQLRVTLMP 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + ++ YG + + E EP E + ++ Sbjct: 66 GRKVATLRGCEFM---NLPHVMDIEGMAYGAIIAEAVMQLFEEEEPLEEAFFLICQAFT- 121 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRSVGLPY 179 + LL GF L C G ++ + SP GG +CR L + Sbjct: 122 LFPNHNKRLVTDSTLFKLLALCGFDPVLDYCTTCGKPMEEDGYFSPVQGGFLCRDCALDH 181 Query: 180 AEKMLVLPSFLWKEEQTIDAD 200 + V L + T+D Sbjct: 182 DLPLTVKAKALVQHLLTLDFK 202 >gi|319900372|ref|YP_004160100.1| DNA replication and repair protein RecO [Bacteroides helcogenes P 36-108] gi|319415403|gb|ADV42514.1| DNA replication and repair protein RecO [Bacteroides helcogenes P 36-108] Length = 242 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 49/163 (30%), Gaps = 5/163 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L Y + +II EV T GR V +S + + Q LV + Sbjct: 1 MLQKTQGIVLHTLKYKDTSIIAEVYTEVAGRASFMVPVPRSRKAVVKAVLFQPLALVELE 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNI 116 R ++ + + + L L L+R + E L+ L Sbjct: 61 ADFRPNASIYKIKEAKSSWPFSTLPYDPCKAAIALFLSEFLYRAVREEAENRPLFAYLRH 120 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 + + + L + +G +L Sbjct: 121 SIIWLDECREGFANFHLVFLMRLSRFLGLYPNLEDYHRGDYFD 163 >gi|300361842|ref|ZP_07058019.1| recombination protein O [Lactobacillus gasseri JV-V03] gi|300354461|gb|EFJ70332.1| recombination protein O [Lactobacillus gasseri JV-V03] Length = 250 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 64/188 (34%), Gaps = 2/188 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL--A 63 +I + Y E +++ ++MT+ +G VR + + N + Sbjct: 9 QGLIFKRKKYKEADVLAKIMTKDHGIFTIDVRGALRPKSRLGAATLNFSYGKYIVNTNWK 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 F+ ++ L + Y + L E + YD++ L Sbjct: 69 GISTLRTFKDVKQLDQLYLDLTKNAYSSYVLDLLDHAFVEYKDIGSFYDLIMKALLKINS 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I ++L LL G L +C++ G Q S + GG +C +++M Sbjct: 129 GEDAAIITQMVQLKLLNAYGVAPQLDRCLICGKVQGTFDYSLELGGIICSDHFNSVSQRM 188 Query: 184 LVLPSFLW 191 + P + Sbjct: 189 HLDPKVVA 196 >gi|312622366|ref|YP_004023979.1| DNA repair protein reco [Caldicellulosiruptor kronotskyensis 2002] gi|312202833|gb|ADQ46160.1| DNA repair protein RecO [Caldicellulosiruptor kronotskyensis 2002] Length = 244 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 53/158 (33%), Gaps = 3/158 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 + I+L ++ E + IL V+T +G+ +N + + Q R Sbjct: 4 IKTKGIVLKETNFEESSKILTVLTSDFGKIQVLSKNCRRLLSVLSACSQPLMFCEFVIR- 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + V+ES +L +Y I + FL + ++ +L L Sbjct: 63 KTKDIYSISSASVIESFFELSQDVNLAIYSGYLIELVDSFLEFEQKNEDVLRLLLNSLYL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 K + E+ +L GF T+CV Sbjct: 123 LKKGKDPEMVSRIFEIKILVYTGFFPQFTQCVKCQRKD 160 >gi|228475983|ref|ZP_04060691.1| DNA repair protein RecO [Staphylococcus hominis SK119] gi|228269806|gb|EEK11286.1| DNA repair protein RecO [Staphylococcus hominis SK119] Length = 249 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 63/201 (31%), Gaps = 9/201 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + II+ YGE + I+ ++ + VR + + V + Sbjct: 1 MLEKQKGIIIKSVDYGESDKIITILNEHGAKIPIMVRRAKKSKTGLQAHTQLFVYGLFIY 60 Query: 61 RL-AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 +V+ + L Y + + R L E L Y +L LN Sbjct: 61 NKWKGMGTLSSIDVINQYYQLRLDIFDSSYATLCVEAIDRSLEPDEVSLYHYKLLEFVLN 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD--LLWVSPKSGGAVC----- 172 + + + + L + GFG C +TG T L+ S K G + Sbjct: 121 KISEGNSAQLMSIIVLLKCMNKFGFGAFFNYCAITGDTDQSKLIAYSFKYDGTISETVLN 180 Query: 173 -RSVGLPYAEKMLVLPSFLWK 192 L + K L L K Sbjct: 181 NDPYALKLSNKTFYLLDILQK 201 >gi|283470844|emb|CAQ50055.1| DNA repair protein RecO [Staphylococcus aureus subsp. aureus ST398] Length = 248 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 63/181 (34%), Gaps = 3/181 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + II+ YGE + I+ ++ + R + + Q V + Sbjct: 2 RQKGIIIKAVDYGESDKIITILNEHGAKVPLMARRAKKVKTGLQAQTQLFVYGLFIYNQW 61 Query: 64 QNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + +G +V+ H + + Y + + R + E + Y +L L + Sbjct: 62 RGMGTLNSVDVISQHYKLQMDLYVSSYSSLAAETIERSMDEGDIAPYNYQLLQFVLEKIE 121 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVCRSVGLPYA 180 + + V + L +K GF +C V+G DL+ S K GA+ R Sbjct: 122 SGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQADLIGYSFKFDGAISRQEAFKDV 181 Query: 181 E 181 Sbjct: 182 H 182 >gi|89900540|ref|YP_523011.1| DNA repair protein RecO [Rhodoferax ferrireducens T118] gi|119361477|sp|Q21XM3|RECO_RHOFD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|89345277|gb|ABD69480.1| DNA repair protein RecO [Rhodoferax ferrireducens T118] Length = 251 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 42/127 (33%), Gaps = 6/127 (4%) Query: 2 YWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNW 58 D+ A +L + E ++ILEV TR +GR + + +PIL L+ V + Sbjct: 5 RISDEPAYVLHRHDWSESSLILEVFTRHHGRIALVAKGVKRPSSSFRPILLPLQLLHVAF 64 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + + + GL L L +P L+D+ + Sbjct: 65 ---GGDAEIRILKAAEWQGGHVMPTGDALMSGLYLNELLLTLLARDDPHTRLFDVYTQVV 121 Query: 119 NCHKIPS 125 Sbjct: 122 QVIASGH 128 >gi|153809179|ref|ZP_01961847.1| hypothetical protein BACCAC_03490 [Bacteroides caccae ATCC 43185] gi|149128155|gb|EDM19375.1| hypothetical protein BACCAC_03490 [Bacteroides caccae ATCC 43185] Length = 242 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 48/171 (28%), Gaps = 5/171 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L Y + +II+++ T GR V +S + + Q + + Sbjct: 1 MLQKTKGIVLHTLKYNDTSIIVDMYTELSGRASFLVAVPRSRKAAVKSVLFQPLSFIEFE 60 Query: 58 WRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R L + + + L L+R + E L+ L Sbjct: 61 ADYRPNATLYRIKEAKSFYPFSSIPYDPYKSSMALFLSEFLYRAVREEAENRPLFAYLQH 120 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 + + + L + +G +L L Sbjct: 121 SIIWLDECGGGFANFHLVFLMRLSRFLGLYPNLEDYHTGDYFDLLNACFTS 171 >gi|325681541|ref|ZP_08161066.1| DNA repair protein RecO [Ruminococcus albus 8] gi|324106808|gb|EGC01099.1| DNA repair protein RecO [Ruminococcus albus 8] Length = 251 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 66/221 (29%), Gaps = 12/221 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH-RMQPILQAGNLVRVNW----RS 60 ++L GE + + V+T + G +VR G+ + QA + + + + Sbjct: 5 KGLVLKEIDSGESSKSICVLTAELGVIYIYVRGGRKSGKTASSTQALSYSTLCFEEKRNA 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + E ++ L + L E E E+ + L+ Sbjct: 65 KGQVSRYLNSSEPVKLFYNIRLDAKKVALAAYFSEMLIYCGTEGEDHTEVLRLALNSLHF 124 Query: 121 HK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKS-GGAVCRSVGLP 178 + E LL IG L C + C Sbjct: 125 LNEDKMDPELLKCVFEFRLLCEIGLRPGLVGCANCFSYESEPMYFDFDRNCLECADCCQD 184 Query: 179 YAEKMLVLPS----FLWKEEQTIDADSLKSAFQLTDYFLNK 215 + L+ +L + D + L F+++D +L K Sbjct: 185 AENRGLMALDKTMLYLVRFIALTDYERLFY-FKISDRYLEK 224 >gi|298243469|ref|ZP_06967276.1| DNA repair protein RecO [Ktedonobacter racemifer DSM 44963] gi|297556523|gb|EFH90387.1| DNA repair protein RecO [Ktedonobacter racemifer DSM 44963] Length = 276 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 25/176 (14%), Positives = 52/176 (29%), Gaps = 24/176 (13%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 + DAIIL GE + +L ++T G+ + + R L+ R+ + + Sbjct: 7 YSTDAIILKHSDLGEADRVLTLLTPYKGKIHAVAKGVRRPVSRKSGHLELLCQSRL-YIA 65 Query: 61 RLAQNLGEFRFEVLESHCAKLL--SSSLFLYGLQSIVPLFRFLPEREPCLELY------- 111 + + + ++ A + + RF+ + ++Y Sbjct: 66 QGRNLHIITQAQTSDAFLALRQGDDIWYRTCAIYLAELVDRFVEDDTQHEDVYNLLLLAL 125 Query: 112 ------------DMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 L+ + E+ LL IG+ L C Sbjct: 126 KTLDEDARKVQQQHLDDSSEPEHERDRSMLLLRYFEIYLLSCIGYEPLLRTCAHCD 181 >gi|289209106|ref|YP_003461172.1| recombination protein O RecO [Thioalkalivibrio sp. K90mix] gi|288944737|gb|ADC72436.1| Recombination protein O RecO [Thioalkalivibrio sp. K90mix] Length = 219 Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 48/143 (33%), Gaps = 9/143 (6%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQ 64 ++L R+ E + +LE++T + GR VR +Q L+ + WR R Sbjct: 9 TQGVVLHARALRENSRVLELLTGEAGRVAAVVRG-----KAGSVQPFVLLDLAWRGRGEL 63 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + + L+ + GL + R P P E L Sbjct: 64 PTLQVAEQQRVFP----LTGRTLVCGLYLNELVLRLYPREAPIPEALPALLTAYARLAAR 119 Query: 125 SVIGKIFVQIELMLLKNIGFGLD 147 + + E LL I GL+ Sbjct: 120 ERADVVLRRAEWALLLPIDSGLE 142 >gi|167739549|ref|ZP_02412323.1| DNA repair protein RecO [Burkholderia pseudomallei 14] Length = 207 Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 11/211 (5%) Query: 29 YGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSL 86 +GR + + + +LQ + ++W + L+ Sbjct: 1 HGRIALVAKGAKRPHSALRGVLQTFQPLSLSWSGKSELRT---LTGAEWVGGMLPLAGDA 57 Query: 87 FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGL 146 L G + L +F +P L+ + L ++ E +LL+ G+ + Sbjct: 58 LLCGFYANELLVKFCAREDPHPPLFQHYLVTLTRLAHGEPPVQVLRSFERVLLRETGYAM 117 Query: 147 DLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE-KMLVLPSFLWKEEQTIDADSLKSA 205 L + V + V + + ++ + L EE + Sbjct: 118 TLKRTVARRAVEPDKLYVFDPQRGVRDAGSDAPSHWPVIAGQTLLDMEEDDYHRAQTVAQ 177 Query: 206 FQLTDYFLNKYALQHNIIHCHLL-RENFLGK 235 + L ++ L + L R+ + Sbjct: 178 SKT----LMRFLLNTYLGGTPLATRQILIDL 204 >gi|312127539|ref|YP_003992413.1| DNA repair protein reco [Caldicellulosiruptor hydrothermalis 108] gi|311777558|gb|ADQ07044.1| DNA repair protein RecO [Caldicellulosiruptor hydrothermalis 108] Length = 244 Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 54/158 (34%), Gaps = 3/158 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 + I+L ++ E + IL V+T +G+ +N + + + Q R Sbjct: 4 IKTKGIVLKETNFEESSKILTVLTSDFGKIQVLSKNCRRLLSVLSAVSQPLMFCEFVIR- 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R V+ES +L +Y I + FL + ++ +L L Sbjct: 63 RTKDIYSISSASVIESFFELSQDVNLAIYSGYLIELVDTFLEFEQKNEDVLRLLLNSLYL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 K + E+ +L GF T+CV Sbjct: 123 LKKGKDPEVVSRIFEIKILVYTGFFPQFTQCVKCQRKD 160 >gi|119513475|ref|ZP_01632500.1| DNA repair protein RecO [Nodularia spumigena CCY9414] gi|119461876|gb|EAW42888.1| DNA repair protein RecO [Nodularia spumigena CCY9414] Length = 295 Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 21/161 (13%), Positives = 52/161 (32%), Gaps = 6/161 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN-WRSR 61 ++ I L + GE + I+ ++TR++G + ++G V ++ Sbjct: 5 YKATGINLKAQVLGESDRIVTILTREFGLIQAVAPGARKQNSSLGGRSGMFVVNELLIAK 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + ++++ G + +P ELY +LN +L+ Sbjct: 65 GRSLDRITQAQTVKTYPDLAKDLGKLAAGQYLAEIVLCQALSEQPQEELYQLLNEYLHQL 124 Query: 122 KIPSVIGKIFVQIE-----LMLLKNIGFGLDLTKCVVTGVT 157 ++ + + G + C +T Sbjct: 125 ELLPKTDTSAIYAQLAQGVFHFFALAGLSPQVQVCCLTQKI 165 >gi|42519245|ref|NP_965175.1| DNA repair protein RecO [Lactobacillus johnsonii NCC 533] gi|61215125|sp|Q74IZ0|RECO_LACJO RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|41583533|gb|AAS09141.1| DNA repair protein RecO [Lactobacillus johnsonii NCC 533] Length = 250 Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 64/188 (34%), Gaps = 2/188 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL--A 63 +I + Y E +++ ++MT+ +G VR + + N + Sbjct: 9 QGLIFKRKKYKEADVLTKIMTKDHGIFTIDVRGALRPKSRLGAATLNFSYGKYIVNTNWK 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 F+ ++ L + Y + L E + YD++ L Sbjct: 69 GISTLRTFKDVKQLDQLYLDLTKNAYSSYVLDLLDHAFVEYKDIGSFYDLIIKALLKINS 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I ++L LL G L +C++ G Q S + GG +C +++M Sbjct: 129 GEDAAIITQMVQLKLLNAYGVAPQLDRCLICGKVQGKFDYSLELGGIICSDHFNSVSQRM 188 Query: 184 LVLPSFLW 191 + P + Sbjct: 189 HLDPKVVA 196 >gi|220906414|ref|YP_002481725.1| DNA repair protein RecO [Cyanothece sp. PCC 7425] gi|254790518|sp|B8HXS5|RECO_CYAP4 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|219863025|gb|ACL43364.1| DNA repair protein RecO [Cyanothece sp. PCC 7425] Length = 293 Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 56/153 (36%), Gaps = 3/153 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++ I L GE + +L ++TR+YG + R ++G V Sbjct: 5 YKATGINLKAMPLGESDRLLTILTREYGLIRVVAPGARKPRSSLGGRSGLFVVNELLIAP 64 Query: 63 AQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 ++L + + E L S+ S + +P +EL+D+L +L+ Sbjct: 65 GRSLHKLSQAETLTSYARLSKHLSTLTASQYLAELVIYQALSEQPQVELFDLLCYYLSWL 124 Query: 122 KIPSVIGKIFV--QIELMLLKNIGFGLDLTKCV 152 + + V + LL+ G + +C Sbjct: 125 EQSPEQEVLAVLSRAVFHLLEWAGIAPQVQQCC 157 >gi|110639673|ref|YP_679883.1| DNA replication and repair protein RecO [Cytophaga hutchinsonii ATCC 33406] gi|110282354|gb|ABG60540.1| DNA replication and repair protein RecO [Cytophaga hutchinsonii ATCC 33406] Length = 224 Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 45/152 (29%), Gaps = 5/152 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLV----RV 56 M + I+L Y + +II +V T +G + + +S + + + + V Sbjct: 1 MLHKTKGIVLNYIKYSDTSIIAKVYTEAFGLQSYIINSVRSAKAKNKIALFQPLTLLDMV 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + E + + + L + L E EL+D L Sbjct: 61 VYHKNNHGLQRISEMRCAEPYFSIPFDIHKTSISIFLSELLLKTLKEESDNQELFDFLFH 120 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLD 147 L+ F L +GF Sbjct: 121 SLHALDKIEKNVLNFHVSFMLRYSFYLGFFPQ 152 >gi|262405439|ref|ZP_06081989.1| DNA repair protein RecO [Bacteroides sp. 2_1_22] gi|262356314|gb|EEZ05404.1| DNA repair protein RecO [Bacteroides sp. 2_1_22] Length = 242 Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 49/171 (28%), Gaps = 5/171 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L Y + +II+++ T GR V +S + + Q + + + Sbjct: 1 MLQKTKGIVLHTLKYNDTSIIVDMYTELSGRASFLVTVPRSRKAAVKSVLFQPLSFIELE 60 Query: 58 WRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R L + + + L L+R + E L+ L Sbjct: 61 ADYRPNATLYRVKEAKSFYPFSSIPYDPYKSSMALFLSEFLYRAIREEAENRPLFAYLQH 120 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 + + + L + +G +L L Sbjct: 121 SIIWLDECGDGFANFHLVFLMRLSRFLGLYPNLEDYHTGDYFDLLNACFTS 171 >gi|253580800|ref|ZP_04858063.1| DNA repair protein RecO [Ruminococcus sp. 5_1_39B_FAA] gi|251847870|gb|EES75837.1| DNA repair protein RecO [Ruminococcus sp. 5_1_39BFAA] Length = 247 Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 26/190 (13%), Positives = 59/190 (31%), Gaps = 5/190 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++L GE + + ++TR+ G+ F + + Q + A V + ++ Sbjct: 5 QGVVLSAMPVGEYDKRIVLLTRERGKISAFAKGARRPNSQFLAAANPFVFGTFALYEGRS 64 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL--NCHKI 123 + H +L +Y + L + + + L Sbjct: 65 SYNLNQVSISHHFVELAGEQPGIYYGYYFLELADYFGQEGIDEKESMNLLYVTVKALLNP 124 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG---VTQDLLWVSPKSGGAVCRSVGLPYA 180 + EL ++ G L CV V + L+ S ++ G + ++ Sbjct: 125 NIDNRLVRCIFELRMMAAQGLCPSLFHCVCCERQPVEGEELFFSQQNHGILDKACLGHVN 184 Query: 181 EKMLVLPSFL 190 + + L Sbjct: 185 DAKRISAPAL 194 >gi|75906952|ref|YP_321248.1| DNA repair protein RecO [Anabaena variabilis ATCC 29413] gi|123610555|sp|Q3MF83|RECO_ANAVT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|75700677|gb|ABA20353.1| DNA replication and repair protein RecO [Anabaena variabilis ATCC 29413] Length = 296 Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 52/160 (32%), Gaps = 8/160 (5%) Query: 1 MY--WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN- 57 M ++ I L ++ GE + I+ ++T+++G + + ++G V Sbjct: 1 MNKTYKATGINLKAQAMGESDRIVTILTQEFGLIRAIAPGSRKYNSSLGGRSGMFVVNEL 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 ++ + + ++++ + +P ELY++LN Sbjct: 61 LIAKGRSLDKITQAQTIKTYPGLAKDLGKLAASQYLAEIVLCQALSEQPQEELYELLNEH 120 Query: 118 LNCHKIPSVIGKIFV-----QIELMLLKNIGFGLDLTKCV 152 L+ + V LL G + C Sbjct: 121 LHRLEELPKGESFGVLAYLAHAVFHLLALAGLTPQVQICC 160 >gi|87118654|ref|ZP_01074553.1| DNA repair protein RecO [Marinomonas sp. MED121] gi|86166288|gb|EAQ67554.1| DNA repair protein RecO [Marinomonas sp. MED121] Length = 254 Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 59/195 (30%), Gaps = 8/195 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A ++ R + + I+L+++T + G R + + I +V + R Sbjct: 11 AYVIHTRPFQDNKILLDLLTLEMGLVRAVFRLPK-KEARVIPGPFLRYQVQLKGRTELKT 69 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 A L G+ L + LP P +++ ++ + Sbjct: 70 VYVLESTE---PASQLEGLRLFAGMYVHEILLKLLPTNLPLSIFFELYQWLIHSLHSNAP 126 Query: 127 IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVL 186 + + + E L + IG ++L V + G +K L Sbjct: 127 VAPLLRRFEYALFEEIGSSINLAMTATGSVLDPSAMYRFDVRFGLRPYYG----DKPKQL 182 Query: 187 PSFLWKEEQTIDADS 201 P + +D Sbjct: 183 PDLFVSGQLALDYTE 197 >gi|268319373|ref|YP_003293029.1| DNA repair protein RecO [Lactobacillus johnsonii FI9785] gi|262397748|emb|CAX66762.1| DNA repair protein RecO [Lactobacillus johnsonii FI9785] Length = 250 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 64/188 (34%), Gaps = 2/188 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL--A 63 +I + Y E +++ ++MT +G VR + + N + Sbjct: 9 QGLIFKRKKYKEADVLTKIMTEDHGIFTIDVRGALRPKSRLGAATLNFSYGKYIVNTNWK 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 F+ ++ L + Y + L E + YD++ L Sbjct: 69 GISTLRTFKDVKQLDQLYLDLTKNAYSSYVLDLLDHAFVEYKNIGSFYDLIMKALLKINS 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I ++L LL G L +C++ G Q + S + GG +C +++M Sbjct: 129 GEDAAIITQMVQLKLLNAYGVAPQLDRCLICGKVQGVFDYSMELGGIICSDHFNSVSQRM 188 Query: 184 LVLPSFLW 191 + P + Sbjct: 189 HLDPKIVA 196 >gi|224476674|ref|YP_002634280.1| putative recombination protein O [Staphylococcus carnosus subsp. carnosus TM300] gi|254790738|sp|B9DNL2|RECO_STACT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|222421281|emb|CAL28095.1| putative recombination protein O [Staphylococcus carnosus subsp. carnosus TM300] Length = 251 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 67/201 (33%), Gaps = 9/201 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-R 59 M + II+ YGE + I+ ++ + V+ + + V + Sbjct: 1 MLMKQKGIIIKSVDYGESDKIITILNENGAKVPLMVKRAKKSKTGLQANTQLFVHGLFIY 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 ++L +V+ + L + + + + + E + +L LN Sbjct: 61 AKLRGLGILNSIDVINQNYQLRLDIYDSSFAALCAEIIDKSMEDEEISNFNFKLLEFCLN 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD--LLWVSPKSGGAVCRSV-- 175 K + + + L + + GF +D KC ++ L+ S K G + Sbjct: 121 RIKEKDSAQLMSIIVLLKKMPSFGFSIDFDKCSISEENDQSKLIAFSFKYHGVISEQYID 180 Query: 176 ----GLPYAEKMLVLPSFLWK 192 + + K L L L K Sbjct: 181 RDPHAINISNKTLYLMDILQK 201 >gi|329667245|gb|AEB93193.1| DNA repair protein [Lactobacillus johnsonii DPC 6026] Length = 250 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 65/188 (34%), Gaps = 2/188 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL--A 63 +I + Y E +++ ++MT+ +G VR + + N + Sbjct: 9 QGLIFKRKKYKEADVLTKIMTKDHGIFTIDVRGALRPKSRLGAATLNFSYGKYIVNTNWK 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 F+ ++ L + Y + L E + Y+++ L Sbjct: 69 GISTLRTFKDVKQLDQLYLDLTKNAYSSYVLDLLDHAFVEYKDIGSFYNLIMKALLKINS 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I ++L LL G L +C++ G Q + S + GG +C +++M Sbjct: 129 GEDAAIITQMVQLKLLNAYGVAPQLDRCLICGKVQGVFDYSMELGGIICSDHFNSVSQRM 188 Query: 184 LVLPSFLW 191 + P + Sbjct: 189 HLDPKVVA 196 >gi|288800567|ref|ZP_06406025.1| DNA repair protein RecO [Prevotella sp. oral taxon 299 str. F0039] gi|288332780|gb|EFC71260.1| DNA repair protein RecO [Prevotella sp. oral taxon 299 str. F0039] Length = 241 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 57/186 (30%), Gaps = 9/186 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M AI+L Y + +I++++T Q GR VR G+ + Q L+ + Sbjct: 1 MLTNTSAIVLHSFKYKDNQMIVDMLTEQLGRISFIVRVGKKGSSATKRQFFQPLTLLELA 60 Query: 58 WRSRLAQNLGEFRFEVL-ESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R L + + + L L+ L++ + Sbjct: 61 FDYRENVGLQKLNDIKIAHPFNSIFFDPFKCSIALFVAEFLYHATKSEAQTALLHNYIEA 120 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLD----LTKCVVTGVTQDLLWVSPKSGGAV 171 L S + + L + IGF + C+ T SP + Sbjct: 121 GLLWLDGCTSSFANFHLVFMIKLTRFIGFYPNTEGFNEGCIFNLRTGCFEEYSPIHADYL 180 Query: 172 CRSVGL 177 + + Sbjct: 181 TPTDSI 186 >gi|237720394|ref|ZP_04550875.1| DNA repair protein [Bacteroides sp. 2_2_4] gi|293370458|ref|ZP_06617011.1| DNA repair protein RecO [Bacteroides ovatus SD CMC 3f] gi|298480565|ref|ZP_06998762.1| DNA repair protein RecO [Bacteroides sp. D22] gi|229450145|gb|EEO55936.1| DNA repair protein [Bacteroides sp. 2_2_4] gi|292634450|gb|EFF52986.1| DNA repair protein RecO [Bacteroides ovatus SD CMC 3f] gi|298273386|gb|EFI14950.1| DNA repair protein RecO [Bacteroides sp. D22] Length = 242 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 48/171 (28%), Gaps = 5/171 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L Y + +II+++ T GR V +S + + Q + + Sbjct: 1 MLQKTKGIVLHTLKYNDTSIIVDMYTELSGRASFLVTVPRSRKAAVKSVLFQPLSFIEFE 60 Query: 58 WRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R L + + + L L+R + E L+ L Sbjct: 61 ADYRPNATLYRVKEAKSFYPFSSIPYDPYKSSMALFLSEFLYRAIREEAENRPLFAYLQH 120 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 + + + L + +G +L L Sbjct: 121 SIIWLDECGDGFANFHLVFLMRLSRFLGLYPNLEDYHTGDYFDLLNACFTS 171 >gi|294646220|ref|ZP_06723874.1| DNA repair protein RecO [Bacteroides ovatus SD CC 2a] gi|294809113|ref|ZP_06767831.1| DNA repair protein RecO [Bacteroides xylanisolvens SD CC 1b] gi|292638438|gb|EFF56802.1| DNA repair protein RecO [Bacteroides ovatus SD CC 2a] gi|294443667|gb|EFG12416.1| DNA repair protein RecO [Bacteroides xylanisolvens SD CC 1b] Length = 264 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 49/171 (28%), Gaps = 5/171 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L Y + +II+++ T GR V +S + + Q + + + Sbjct: 23 MLQKTKGIVLHTLKYNDTSIIVDMYTELSGRASFLVTVPRSRKAAVKSVLFQPLSFIELE 82 Query: 58 WRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R L + + + L L+R + E L+ L Sbjct: 83 ADYRPNATLYRVKEAKSFYPFSSIPYDPYKSSMALFLSEFLYRAIREEAENRPLFAYLQH 142 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 + + + L + +G +L L Sbjct: 143 SIIWLDECGDGFANFHLVFLMRLSRFLGLYPNLEDYHTGDYFDLLNACFTS 193 >gi|160883900|ref|ZP_02064903.1| hypothetical protein BACOVA_01873 [Bacteroides ovatus ATCC 8483] gi|260172415|ref|ZP_05758827.1| DNA repair protein [Bacteroides sp. D2] gi|299147114|ref|ZP_07040181.1| DNA repair protein RecO [Bacteroides sp. 3_1_23] gi|315920711|ref|ZP_07916951.1| DNA repair protein [Bacteroides sp. D2] gi|156110630|gb|EDO12375.1| hypothetical protein BACOVA_01873 [Bacteroides ovatus ATCC 8483] gi|298514999|gb|EFI38881.1| DNA repair protein RecO [Bacteroides sp. 3_1_23] gi|313694586|gb|EFS31421.1| DNA repair protein [Bacteroides sp. D2] Length = 242 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 48/171 (28%), Gaps = 5/171 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L Y + +II+++ T GR V +S + + Q + + Sbjct: 1 MLQKTKGIVLHTLKYNDTSIIVDMYTELSGRASFLVTVPRSRKAAVKSVLFQPLSFIEFE 60 Query: 58 WRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R L + + + L L+R + E L+ L Sbjct: 61 ADYRPNATLYRVKEAKSFYPFSSIPYDPYKSSMALFLSEFLYRAIREEAENRPLFAYLQH 120 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 + + + L + +G +L L Sbjct: 121 SIIWLDECGEGFANFHLVFLMRLSRFLGLYPNLEDYHTGDYFDLLNACFTS 171 >gi|197303355|ref|ZP_03168395.1| hypothetical protein RUMLAC_02078 [Ruminococcus lactaris ATCC 29176] gi|197297639|gb|EDY32199.1| hypothetical protein RUMLAC_02078 [Ruminococcus lactaris ATCC 29176] Length = 231 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 57/168 (33%), Gaps = 2/168 (1%) Query: 16 GEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEVLE 75 GE + + ++T++ G+ F + + + + ++ + + Sbjct: 2 GEYDRRVVLLTKEQGKVSAFAKGSRRPNSPLVGVVNPFTFGEFTMYEGRSSYTIQSAKVI 61 Query: 76 SHCAKLLSSSL-FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH-KIPSVIGKIFVQ 133 ++ ++L L YG + + E LE+ +L + I Sbjct: 62 NYFSELREDVLGAYYGFYFLEVANYYAREFNDELEMLKLLYQTMRALTNPHIPDALIRCI 121 Query: 134 IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 EL +L G G + +CV G + S GG VC + + Sbjct: 122 YELKILTINGQGPQVFQCVNCGNKAETAVFSAGRGGLVCETCAGEVRD 169 >gi|325954539|ref|YP_004238199.1| DNA repair protein recO [Weeksella virosa DSM 16922] gi|323437157|gb|ADX67621.1| DNA repair protein recO [Weeksella virosa DSM 16922] Length = 237 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 67/232 (28%), Gaps = 8/232 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG-QSHRMQPILQAGNLVRVNWR 59 M +L YG+ +IL + T+++G V N ++ + V V +R Sbjct: 1 MDITTRGFVLSAVKYGDTRLILRIYTQEFGLRSFIVGNAFAKNKSAALYFPLASVEVFFR 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLL-SSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + L + ++ + + + + L E E LY L L Sbjct: 61 LKNNSTLVNAKQLSAANYFHTIHVNPVKSTMVMFLAEVMQMVLKEEESNTLLYRYLEENL 120 Query: 119 NCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + L K +GF ++ + + +S + Sbjct: 121 IRFDEREKNYADFHLWFLMQLTKFLGFFPNIEAMEQDYFDLENGVFTSESVHVEHLTQTQ 180 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHN-IIHCHLL 228 K L+ F K+ + + + L KY H Sbjct: 181 TQLWKALLQLDFREKQSSAFNQSQRRELL----HLLMKYYQIHLPNFFQPKS 228 >gi|312135209|ref|YP_004002547.1| DNA repair protein reco [Caldicellulosiruptor owensensis OL] gi|311775260|gb|ADQ04747.1| DNA repair protein RecO [Caldicellulosiruptor owensensis OL] Length = 244 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 55/158 (34%), Gaps = 3/158 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 + I+L ++ E + IL V+T +G+ +N + + + Q Sbjct: 4 IKTKGIVLKETNFEESSKILTVLTSDFGKIQVLSKNCRRLLSVLSAVSQPLMFCEFV-IK 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + V+ES + +L +Y I + FL + ++ +L L Sbjct: 63 KTKDIYSISSASVIESFFELSQNVNLAIYSGYLIELVDDFLEFEQKNEDVLRLLLNSLYL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 K ++ E+ +L GF T+CV Sbjct: 123 LKKGKDPEEVSRIFEIKILVYTGFFPQFTQCVKCQRKD 160 >gi|149277016|ref|ZP_01883158.1| possible DNA repair protein [Pedobacter sp. BAL39] gi|149231893|gb|EDM37270.1| possible DNA repair protein [Pedobacter sp. BAL39] Length = 241 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 20/151 (13%), Positives = 49/151 (32%), Gaps = 5/151 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + I+L Y E ++I+++ T + G + + + + +LQ +LV + Sbjct: 1 MLHKTRGIVLKTTLYSESSVIVQIFTEKLGIQSYMINGVKKPKAKIHMNMLQPLHLVDMI 60 Query: 58 WRSR-LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + + + L++ + ++ L+D + Sbjct: 61 VYHKANTNIQRVSELRPSPVFRSIPYDIIKSTIAMFLNEVLYKSIRQQTTDEHLFDFIFS 120 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGL 146 + + F L L + +GF Sbjct: 121 AICWFDETNEQQHNFHLAFLLKLTRFLGFAP 151 >gi|187250605|ref|YP_001875087.1| DNA repair protein RecO [Elusimicrobium minutum Pei191] gi|186970765|gb|ACC97750.1| DNA repair protein RecO [Elusimicrobium minutum Pei191] Length = 232 Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 56/147 (38%), Gaps = 3/147 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSR 61 D+ I+L +++ E + ++ + T+ YGR + +++ + + + Sbjct: 2 TDEGIVLIRQNFREADRMVSLYTKSYGRLNLRFPSVNKSAGKLKALSEPFVHANYRIYVK 61 Query: 62 LAQNLGEFRFEVLESHCAKLL-SSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 +G +ES ++ L +FR PE +P E + +L LN Sbjct: 62 RGAVIGCVTGGKIESVFPQIRQDGPKTKMALHFCELMFRLTPEHQPSEEKFLLLQEALNS 121 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLD 147 + + L L+ GFG+D Sbjct: 122 LQKTDCNPSLSPAFILRLMTLAGFGMD 148 >gi|315224182|ref|ZP_07866022.1| recombination protein O [Capnocytophaga ochracea F0287] gi|314945915|gb|EFS97924.1| recombination protein O [Capnocytophaga ochracea F0287] Length = 238 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 20/155 (12%), Positives = 49/155 (31%), Gaps = 5/155 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP----ILQAGNLVRV 56 MY + AI++ + ++I++ T+ G ++ + + + Q L+ + Sbjct: 1 MYDKVRAIVISSLKCSDNSLIVKCFTQTMGTRSYLLQGVLAQKKGNLKTALFQPFMLLEL 60 Query: 57 NWRSRLAQNLGEFRFEVLE-SHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + LG + + + + + P E++ L Sbjct: 61 VATHKNNGTLGRVKEAKIAVPYYSLHTDMYKSAVSMFLSEVCAFVCTSEAPDEEMFLFLE 120 Query: 116 IFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTK 150 L ++ L + + +GF D T Sbjct: 121 QKLLFFDRNDFSANFHLKFLLDITRYLGFYPDTTH 155 >gi|295086260|emb|CBK67783.1| DNA replication and repair protein RecO [Bacteroides xylanisolvens XB1A] Length = 264 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 48/171 (28%), Gaps = 5/171 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L Y + +II+++ T GR V +S + + Q + + Sbjct: 23 MLQKTKGIVLHTLKYNDTSIIVDMYTELSGRASFLVTVPRSRKAAVKSVLFQPLSFIEFE 82 Query: 58 WRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R L + + + L L+R + E L+ L Sbjct: 83 ADYRPNATLYRVKEAKSFYPFSSIPYDPYKSSMALFLSEFLYRAIREEAENRPLFAYLQH 142 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 + + + L + +G +L L Sbjct: 143 SIIWLDECGDGFANFHLVFLMRLSRFLGLYPNLEDYHTGDYFDLLNACFTS 193 >gi|256825022|ref|YP_003148982.1| DNA replication and repair protein RecO [Kytococcus sedentarius DSM 20547] gi|256688415|gb|ACV06217.1| DNA replication and repair protein RecO [Kytococcus sedentarius DSM 20547] Length = 279 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 67/206 (32%), Gaps = 7/206 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++D AI+L GE + I+ ++ Q G+ + + R + L+ +V V Sbjct: 4 YRDAAIVLRTHPLGEADRIVTLLGHQRGKVRAVAKGVRRTRSRFGARLEPAMVVDVQCYE 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + A ++ + E E + + +L L+ Sbjct: 64 GRTLDTITQAEGLAAYGEAIARDYPRWVCSTVMCETADSLVDEGETSPQQFRLLAGALSA 123 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + ++ LL+ + G+ + C G +GGAVC S Sbjct: 124 LAVGQWPADL--LLDGYLLRAMAIAGWPMMARDCARCGAPGPHRAFHVAAGGAVCPSCRT 181 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLK 203 AE + D +++ Sbjct: 182 AGAEAPHPDSFTMLHALGESDWGTVR 207 >gi|227890108|ref|ZP_04007913.1| recombination protein O [Lactobacillus johnsonii ATCC 33200] gi|227849552|gb|EEJ59638.1| recombination protein O [Lactobacillus johnsonii ATCC 33200] Length = 250 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 65/188 (34%), Gaps = 2/188 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL--A 63 +I + Y E +++ ++MT+ +G R + + N + Sbjct: 9 QGLIFKRKKYKEADVLTKIMTKDHGIFTIDARGALRPKSRLGAATLNFSYGKYIVNTNWK 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 F+ ++ L + Y + L E + YD++ L + Sbjct: 69 GISTLRTFKDVKQLDQLYLDLTKNAYSSYVLDLLDHAFVEYKNIGSFYDLIMKALLKINL 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I ++L LL G L +C++ G Q + S + GG +C +++M Sbjct: 129 GEDAAIITQMVQLKLLNAYGVAPQLDRCLICGKVQGVFDYSMELGGIICSDHFNSVSQRM 188 Query: 184 LVLPSFLW 191 + P + Sbjct: 189 HLDPKIVA 196 >gi|314936313|ref|ZP_07843660.1| DNA repair protein RecO [Staphylococcus hominis subsp. hominis C80] gi|313654932|gb|EFS18677.1| DNA repair protein RecO [Staphylococcus hominis subsp. hominis C80] Length = 249 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 62/201 (30%), Gaps = 9/201 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + II+ YGE + I+ ++ + VR + + V + Sbjct: 1 MLEKQKGIIIKSVDYGESDKIITILNEHGAKIPIMVRRAKKSKTGLQAHTQLFVYGLFIY 60 Query: 61 RL-AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 +V+ + L Y + + R L E L Y +L LN Sbjct: 61 NKWKGMGTLSSIDVINQYYQLRLDIFDSSYATLCVEAIDRSLEPDEVSLYHYKLLEFVLN 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD--LLWVSPKSGGAVC----- 172 + + + + L + GF C +TG T L+ S K G + Sbjct: 121 KISEGNSAQLMSIIVLLKCMNKFGFDAFFNYCAITGDTDQSKLIAYSFKYDGTISETVLN 180 Query: 173 -RSVGLPYAEKMLVLPSFLWK 192 L + K L L K Sbjct: 181 NDPYALKLSNKTFYLLDILQK 201 >gi|222529400|ref|YP_002573282.1| DNA repair protein RecO [Caldicellulosiruptor bescii DSM 6725] gi|254790507|sp|B9MS55|RECO_ANATD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|222456247|gb|ACM60509.1| DNA repair protein RecO [Caldicellulosiruptor bescii DSM 6725] Length = 244 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 54/158 (34%), Gaps = 3/158 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 + I+L ++ E + IL V+T +G+ +N + + Q R Sbjct: 4 IKTKGIVLKETNFEESSKILTVLTSDFGKIQVLSKNCRRLLSVLSACSQPLMFCEFVIR- 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + V+ES +L +Y I + FL + ++ +L L Sbjct: 63 KTKDIYSISSASVIESFFELSQDVNLAIYSGYLIELVDSFLEFEQKNEDVLRLLLNSLYL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 K + E+ +L GF L T+CV Sbjct: 123 LKKGKDPEVVSRIFEIKILVYTGFFLQFTQCVKCQRKD 160 >gi|309790752|ref|ZP_07685300.1| DNA repair protein RecO [Oscillochloris trichoides DG6] gi|308227202|gb|EFO80882.1| DNA repair protein RecO [Oscillochloris trichoides DG6] Length = 251 Score = 69.1 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 48/154 (31%), Gaps = 2/154 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 ++ +A+IL E + +L + T G+ + + + + + Sbjct: 6 YRTEALILRRSDMAEADRLLLIATPN-GKVRVVAKGVRKISSRLAGHIELFTHASLLLAV 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCL-ELYDMLNIFLNCH 121 +NL + L + L + L+ L E ++ +L Sbjct: 65 GRNLDIVTQSQAINTFTTLRNDITRLSCAYYVADLYATLTEEGEENRPIFQLLVETFAAL 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + I EL LL+ G+ L C G Sbjct: 125 DLSINPDLILRSFELRLLQIAGYRPHLHHCAQCG 158 >gi|330823893|ref|YP_004387196.1| DNA repair protein RecO [Alicycliphilus denitrificans K601] gi|329309265|gb|AEB83680.1| DNA repair protein RecO [Alicycliphilus denitrificans K601] Length = 257 Score = 69.1 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 42/117 (35%), Gaps = 4/117 (3%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWR 59 + A IL + E ++IL+V T YGR + + +P+L +R+ W Sbjct: 6 IVDEPAYILHAYDWSESSLILDVFTCHYGRVALVAKGAKKPTSNFRPVLLPLQPLRLAWG 65 Query: 60 SRLAQNLGEFRFEV--LESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 GE L + L GL L R L + +L+D+ Sbjct: 66 LAGEVGQGEIHTLKAAEWVGGHVLPTGDALLSGLYLNELLLRLLAREDTHAQLFDLY 122 >gi|304438433|ref|ZP_07398373.1| recombination protein O [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368516|gb|EFM22201.1| recombination protein O [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 243 Score = 69.1 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 28/200 (14%), Positives = 54/200 (27%), Gaps = 1/200 (0%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 + + I+LG RS+GE + ++ + T+++G + R V + + Sbjct: 3 IYGAEGIVLGTRSWGEADKVVTLYTKEHGLVRAAAFGCRRPRSPLAGAMQLFVHADLQLA 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 L + + + ++ L + E + + Sbjct: 63 EGTRLETVKTASVRASHHRIADDLAALAYATFTAEVVCAFMPEGVEDETFFDALAQIMTA 122 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLWVSPKSGGAVCRSVGLPYA 180 + L L G C+ G GGA+C A Sbjct: 123 FETRQPRVTALAAVLRTLDAAGLQQTYDHCLHCGTKISGDAVFHAAEGGALCADCAGEGA 182 Query: 181 EKMLVLPSFLWKEEQTIDAD 200 L E + ID Sbjct: 183 MPFSAELRTLLTELRQIDWK 202 >gi|292669774|ref|ZP_06603200.1| DNA repair protein RecO [Selenomonas noxia ATCC 43541] gi|292648571|gb|EFF66543.1| DNA repair protein RecO [Selenomonas noxia ATCC 43541] Length = 243 Score = 69.1 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 67/198 (33%), Gaps = 3/198 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SRLAQ 64 + I+LG R++GE + I+ V TR+ G + R V + + + A+ Sbjct: 7 EGIVLGARNWGEADKIVTVFTRRQGILRAAAFGCRRPRSPLAGAMQMFVHADLQLAEGAR 66 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 V + H L + Y + FLPE +D L L + Sbjct: 67 LETVKTASVRDHHAKISLDLASLAYATFVAEVIREFLPEGVSDEAFFDRLVHILTAFETR 126 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV-TQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + + + +L G +C+ G + + + GGA+C A Sbjct: 127 NPRVTALASV-VQILAAAGLQQSYERCIHCGKAIEGDAFFLAREGGALCADCRTEGAVLF 185 Query: 184 LVLPSFLWKEEQTIDADS 201 L QT+D + Sbjct: 186 SAELRELLIGLQTLDWQN 203 >gi|6647944|sp|Q9ZD02|Y548_RICPR RecName: Full=Uncharacterized protein RP548 gi|3861097|emb|CAA14997.1| unknown [Rickettsia prowazekii] Length = 115 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 58/116 (50%), Gaps = 1/116 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D +I+ + E I+ V T+ +G + G ++ S + + I Q GN+V W++ Sbjct: 1 MNIKDIGVIISKKPLKENTFIIRVFTKNHGLYSGVIK-ESSKKNKFIYQEGNIVDFLWKA 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 RL +++G + E+++S+ + + LY S++ L + L ++ ++ Sbjct: 60 RLHEHIGIAKCELIKSYTGYFIINKAKLYAFNSVISLIQELFHEREEHSIFFFISN 115 >gi|319763843|ref|YP_004127780.1| DNA repair protein reco [Alicycliphilus denitrificans BC] gi|317118404|gb|ADV00893.1| DNA repair protein RecO [Alicycliphilus denitrificans BC] Length = 257 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 42/117 (35%), Gaps = 4/117 (3%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWR 59 + A IL + E ++IL+V T YGR + + +P+L +R+ W Sbjct: 6 IVDEPAYILHAYDWSESSLILDVFTCHYGRVALVAKGAKKPTSNFRPVLLPLQPLRLAWG 65 Query: 60 SRLAQNLGEFRFEV--LESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 GE L + L GL L R L + +L+D+ Sbjct: 66 LAGEVGQGEIHTLKAAEWVGGHVLPTGDALLSGLYLNELLLRLLAREDTHAQLFDLY 122 >gi|167627663|ref|YP_001678163.1| DNA repair protein RecO [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254764632|sp|B0TYI6|RECO_FRAP2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|167597664|gb|ABZ87662.1| DNA repair protein RecO [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 233 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 88/233 (37%), Gaps = 14/233 (6%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLV--RVNWRSRLAQN 65 IL Y E ++++ + TR++G+ G +R + + + Q + +++ + Sbjct: 8 YILHQCKYKENSLLVSIFTREFGKISGLIR--VNKKTINLYQPLVKLRGQISLAKKSDGL 65 Query: 66 LGEFRFEVLES-HCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + E +ES + ++ Y + I L + E E E Y + +N Sbjct: 66 SKIYNVEFVESFYQNTYINLLSLQYMNELIYLLLSYSHEEEFLFEKYGFILKNINEINYK 125 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKML 184 + EL LL ++G G+ + + + + L S + G +P + Sbjct: 126 ----YLLRMFELELLDSLGQGVYVDCDIDGMLIDESLSYSILATGFKKNLSTIPNSIAGK 181 Query: 185 VLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 L + + + LK+ ++T +++ YAL R+ + L Sbjct: 182 NLLK-INQSVSLWTDEDLKAISKVTRAYID-YALA---GKQLRSRKLLIDYLN 229 >gi|329964538|ref|ZP_08301592.1| DNA repair protein RecO [Bacteroides fluxus YIT 12057] gi|328524938|gb|EGF51990.1| DNA repair protein RecO [Bacteroides fluxus YIT 12057] Length = 242 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 50/163 (30%), Gaps = 5/163 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L Y + +II+++ T GR V +S + + Q LV + Sbjct: 1 MLQKTSGIVLHTLKYKDTSIIVDIYTEVAGRASFVVSVPRSRKAAVKSVLFQPLALVELE 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNI 116 R + + + + L L L+R + E L+ L Sbjct: 61 ADFRPTATIYKVKEAKSFYPFSTLPYDPYKSAIALFLSEFLYRAVREEAENRPLFAYLRH 120 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 + + + + L + +G +L Sbjct: 121 SIIWLDECGTGFANFHLVFLMRLSRFLGLYPNLEDYHKGDYFD 163 >gi|17231667|ref|NP_488215.1| DNA repair protein RecO [Nostoc sp. PCC 7120] gi|20139486|sp|Q8YPL9|RECO_ANASP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|17133310|dbj|BAB75874.1| alr4175 [Nostoc sp. PCC 7120] Length = 296 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 51/160 (31%), Gaps = 8/160 (5%) Query: 1 MY--WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN- 57 M ++ I L ++ GE + I+ ++T+++G + H ++ V Sbjct: 1 MNKTYKATGINLKAQAMGESDRIVTILTQEFGLIRAIAPGSRKHNSSLGGRSAMFVVNEL 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 ++ + + ++++ + +P ELY++LN Sbjct: 61 LIAKGRSLDKITQAQTIKTYPGLAKDLGKLAASQYLAEIVLCQALSEQPQEELYELLNEH 120 Query: 118 LNCHKIPSVIGKIFV-----QIELMLLKNIGFGLDLTKCV 152 L+ + V LL G + C Sbjct: 121 LHRLEELPKGESFGVLAYLAHAVFHLLALAGLTPQVQICC 160 >gi|293400672|ref|ZP_06644817.1| DNA repair protein RecO [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305698|gb|EFE46942.1| DNA repair protein RecO [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 243 Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 65/177 (36%), Gaps = 5/177 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M + + II+ + Y E + IL V+ R+ G R Q + P Q VR+ Sbjct: 1 MKDELEGIIIRYQEYREHDAILHVLCRKRGIVHVNARGIQKVKSKNAPACQLFTHVRMQL 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + +++ R + + L + ++++++ L Sbjct: 61 PLQETRSIYTLRSAEIIEGYRHIREDLLKQSIAAYVCECIDASKFE---EDVFEVVQTVL 117 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + + +I + ++ + G + CV G + + +S + GG +C S Sbjct: 118 DILQETTHPIRILCLFQAIMNRMHGIEPYVDGCVRCGNQKAIYAISIRDGGFICHSC 174 >gi|116629755|ref|YP_814927.1| recombinational DNA repair protein (RecF pathway) [Lactobacillus gasseri ATCC 33323] gi|311110603|ref|ZP_07712000.1| DNA repair protein RecO [Lactobacillus gasseri MV-22] gi|122273307|sp|Q042Y3|RECO_LACGA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|116095337|gb|ABJ60489.1| DNA replication and repair protein RecO [Lactobacillus gasseri ATCC 33323] gi|311065757|gb|EFQ46097.1| DNA repair protein RecO [Lactobacillus gasseri MV-22] Length = 250 Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 65/188 (34%), Gaps = 2/188 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL--A 63 +I + Y E +I+ ++MT+ +G VR + + N + Sbjct: 9 QGLIFKRKKYKEADILTKIMTKDHGIFTIDVRGALRPKSRLGAATLNFSYGKYIVNTNWK 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 F+ ++ L + Y + L E + YD++ L Sbjct: 69 GISSLRTFKDVKQLDQLYLDLTKNAYSSYVLDLLDHAFVEYKDIGSFYDLIMKALLKINS 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + I ++L LL G L +C++ G Q S + GG +C +++M Sbjct: 129 GEDVAVITQMVQLKLLNAYGVAPQLDRCLICGKVQGTFDYSLELGGIICSDHFNSVSQRM 188 Query: 184 LVLPSFLW 191 + P + Sbjct: 189 HLDPKVVA 196 >gi|184200938|ref|YP_001855145.1| DNA repair protein RecO [Kocuria rhizophila DC2201] gi|183581168|dbj|BAG29639.1| DNA repair protein RecO [Kocuria rhizophila DC2201] Length = 252 Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 63/208 (30%), Gaps = 6/208 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS 60 ++DDA++L + GE + I+ +++ Q+G+ + + R L+ N+ V Sbjct: 11 YRDDAVVLRTYTLGEADRIVILLSAQHGQVRAVAKGVRRTTSRFGARLEPFNVAEVQLVH 70 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + ++ + F R + + L Sbjct: 71 GRSLDIVSQAIGKRSYGERIVSDYERFTAAAAMAETAERLTADDHDTAAQHYRLL-VGAL 129 Query: 121 HKIPSVIGKIFVQIELMLLK---NIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + ++ LL+ G+ C G S GGAVC Sbjct: 130 SATARGLHRPGRILDSYLLRAVSLAGWTPSFVDCARCGAPGPHRSFSAPLGGAVCPQCRP 189 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSA 205 P + L D ++ +A Sbjct: 190 PGSAAPSDATFVLLNGLLHGDWPTIDAA 217 >gi|291544278|emb|CBL17387.1| DNA repair protein RecO [Ruminococcus sp. 18P13] Length = 252 Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 58/191 (30%), Gaps = 5/191 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M I++ RS GE++ ++++T G VR + R Q + Sbjct: 1 MLTTVTGIVIRERSVGEQDKFIDLLTADQGVLEVSVRGAKKITSRHGAASQLYAYGQYCL 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 SR + +V + + + ++ +L L Sbjct: 61 DSRRDRYY-LNSAQVERIFYDLRQDLTRLSLATYFSELIGFAVGAEHAKSDILRLLLNTL 119 Query: 119 NCHKI-PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD-LLWVSPKSGGAVCRSVG 176 + + + + EL L +G D+ C V G L ++G +C Sbjct: 120 HYLEEGSRPVPLLKALFELRFLTELGMMPDIVCCDVCGEYAPAQLIFRLQAGNFICAHCA 179 Query: 177 LPYAEKMLVLP 187 A +P Sbjct: 180 GEIAPDREQMP 190 >gi|206602233|gb|EDZ38715.1| Recombination protein O (RecO) [Leptospirillum sp. Group II '5-way CG'] Length = 246 Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 59/175 (33%), Gaps = 6/175 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLAQ 64 A++L Y E + ++ +R+ G GF R S+R L+ L R+ R L Sbjct: 5 ALVLRSVRYLESDKVVTFFSREEGVLTGFARGAAGMSNRFGASLEPLTLSRILGRFHLEG 64 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQS-IVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 L + + + + S Y I L LP P ++D+ +L Sbjct: 65 TLYRIHKASIVNPFSSIKSDLDRCYWAGMGIRLLLGLLPAALPEPPVFDIAVNYLELLSA 124 Query: 124 PSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVCRSV 175 + + L +G+ + C + L+ P G +C Sbjct: 125 QEISPAFSWLRFAASALDLLGYQIRADDCSFCKEAPFGNSLFYYPMDGRVLCSRC 179 >gi|212692801|ref|ZP_03300929.1| hypothetical protein BACDOR_02300 [Bacteroides dorei DSM 17855] gi|237709489|ref|ZP_04539970.1| DNA repair protein [Bacteroides sp. 9_1_42FAA] gi|237724915|ref|ZP_04555396.1| DNA repair protein [Bacteroides sp. D4] gi|265754696|ref|ZP_06089748.1| DNA repair protein RecO [Bacteroides sp. 3_1_33FAA] gi|212664590|gb|EEB25162.1| hypothetical protein BACDOR_02300 [Bacteroides dorei DSM 17855] gi|229436653|gb|EEO46730.1| DNA repair protein [Bacteroides dorei 5_1_36/D4] gi|229456545|gb|EEO62266.1| DNA repair protein [Bacteroides sp. 9_1_42FAA] gi|263234810|gb|EEZ20378.1| DNA repair protein RecO [Bacteroides sp. 3_1_33FAA] Length = 241 Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 21/156 (13%), Positives = 45/156 (28%), Gaps = 5/156 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + I+L Y + + I+++ TR+ GR V +S + + Q +++ Sbjct: 1 MLQKTVGIVLHTLKYNDTSNIVDIYTRENGRASFLVSVPRSRKSAVKTVLFQPLSMIEFE 60 Query: 58 WRSRL-AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R + + + L+R L E L+ L Sbjct: 61 ADYRPMSNLYRIKEAKSWHPFRTLPYDPYKSSIAMFLAEFLYRALREEAENGPLFAYLEH 120 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKC 151 + F + + +G + Sbjct: 121 SIRWLDECDRSFSNFHLVFLMRFSRFLGLYPNTEDY 156 >gi|282851788|ref|ZP_06261151.1| DNA repair protein RecO [Lactobacillus gasseri 224-1] gi|282557030|gb|EFB62629.1| DNA repair protein RecO [Lactobacillus gasseri 224-1] Length = 250 Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 64/188 (34%), Gaps = 2/188 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL--A 63 +I + Y E +I+ +MT+ +G VR + + N + Sbjct: 9 QGLIFKRKKYKEADILTNIMTKDHGIFTIDVRGALRPKSRLGAATLNFSYGKYIVNTNWK 68 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 F+ ++ L + Y + L E + YD++ L Sbjct: 69 GISSLRTFKDVKQLDQLYLDLTKNAYSSYVLDLLDHAFVEYKDIGSFYDLIMKALLKINS 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + I ++L LL G L +C++ G Q S + GG +C +++M Sbjct: 129 GEDVAVITQMVQLKLLNAYGVAPQLDRCLICGKVQGTFDYSLELGGIICSDHFNSVSQRM 188 Query: 184 LVLPSFLW 191 + P + Sbjct: 189 HLDPKVVA 196 >gi|258508544|ref|YP_003171295.1| DNA repair protein recO [Lactobacillus rhamnosus GG] gi|257148471|emb|CAR87444.1| DNA repair protein recO [Lactobacillus rhamnosus GG] Length = 259 Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 4/197 (2%) Query: 11 GVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS--RLAQNLGE 68 ++Y E +++++++T Q+G+ + V + ++ R + Sbjct: 2 SRQNYRESDMLVKILTDQFGKKMFLVNRARKPGFTLAAGILPFTHADYIGEVRDSGLSYL 61 Query: 69 FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIG 128 + + +L Y L P+ P + + L+ Sbjct: 62 SAIKNPTQYRQISNDITLNAYAAYIFGLLDLAFPDGRPVGFWFKQVKQALHLIDTGLDPQ 121 Query: 129 KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPS 188 I +E+ +LK G + CV+ G T L S GG +C+ ++ P Sbjct: 122 IIANVVEVQMLKAYGVEPNWRGCVIDGRTDLPLDFSESYGGLLCQQHWDKDPHRLHASPR 181 Query: 189 --FLWKEEQTIDADSLK 203 F + T+D +K Sbjct: 182 AIFYLRRFSTLDLSQVK 198 >gi|237716663|ref|ZP_04547144.1| DNA repair protein [Bacteroides sp. D1] gi|229442646|gb|EEO48437.1| DNA repair protein [Bacteroides sp. D1] Length = 241 Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 49/171 (28%), Gaps = 6/171 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L Y + +II+++ T GR V +S + + Q + + + Sbjct: 1 MQ-KTKGIVLHTLKYNDTSIIVDMYTELSGRASFLVTVPRSRKAAVKSVLFQPLSFIELE 59 Query: 58 WRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R L + + + L L+R + E L+ L Sbjct: 60 ADYRPNATLYRVKEAKSFYPFSSIPYDPYKSSMALFLSEFLYRAIREEAENRPLFAYLQH 119 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 + + + L + +G +L L Sbjct: 120 SIIWLDECGDGFANFHLVFLMRLSRFLGLYPNLEDYHTGDYFDLLNACFTS 170 >gi|113477991|ref|YP_724052.1| DNA repair protein RecO [Trichodesmium erythraeum IMS101] gi|119361497|sp|Q10VZ5|RECO_TRIEI RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|110169039|gb|ABG53579.1| DNA replication and repair protein RecO [Trichodesmium erythraeum IMS101] Length = 288 Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 27/188 (14%), Positives = 55/188 (29%), Gaps = 10/188 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSR 61 ++ I L + GE + +L ++T +YG + + + +V S+ Sbjct: 5 YKATGINLKAMALGESDRLLTILTPEYGLIRVVAPGVRKQKSKLGGRGELFVVNQLLISK 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + E + S+ + G + + + P EL+ +LN L Sbjct: 65 GRSLDRINQAETITSYTGLSQNLGKLAAGQYLAELVQQIALKENPQTELFHLLNEHLERI 124 Query: 122 KIPSVIGKIFVQIE---------LMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + + LL G + +C TG + + K Sbjct: 125 EQLQHKTDRLWSTQLIAFLAHGIYHLLAIEGIAPQVHQCCATGNELQPDFNNSKWQVGFS 184 Query: 173 RSVGLPYA 180 G Sbjct: 185 IDAGGIIK 192 >gi|46580308|ref|YP_011116.1| DNA repair protein RecO [Desulfovibrio vulgaris str. Hildenborough] gi|120602310|ref|YP_966710.1| DNA repair protein RecO [Desulfovibrio vulgaris DP4] gi|81566609|sp|Q72AU1|RECO_DESVH RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254790555|sp|A1VCW7|RECO_DESVV RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|46449725|gb|AAS96375.1| DNA repair protein RecO, putative [Desulfovibrio vulgaris str. Hildenborough] gi|120562539|gb|ABM28283.1| DNA replication and repair protein RecO [Desulfovibrio vulgaris DP4] gi|311233709|gb|ADP86563.1| DNA repair protein RecO [Desulfovibrio vulgaris RCH1] Length = 251 Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 45/163 (27%), Gaps = 4/163 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M + D A++L V + E ++ + + RQ G F G R + L N+V + Sbjct: 1 MDFTDQALVLRVGRFREADLWVRFLCRQRGIISAFAFGGCRSRRRFCGCLDIFNVVLMRV 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL--PEREPCLELYDMLNI 116 + + L +L + + L L + Sbjct: 61 QGTRGGLYQSLQEATLLKGPDRLRRDWRRYGVAVNCLRFIEALGAGPDGADSAFTLTLEM 120 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 + V + + G+ C G D Sbjct: 121 LELLETVDVVPPLLPLLFRARFAFEQGYAPRFESCASCGEPFD 163 >gi|317153440|ref|YP_004121488.1| DNA repair protein RecO [Desulfovibrio aespoeensis Aspo-2] gi|316943691|gb|ADU62742.1| DNA repair protein RecO [Desulfovibrio aespoeensis Aspo-2] Length = 252 Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 47/159 (29%), Gaps = 4/159 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M + A++L V + E + +++ T G F G R + L +LV + Sbjct: 1 MNATEKALVLKVGCFRESDCWVKLFTPSRGIFNAFAFGGARSRRRFVGCLDPLSLVLFSI 60 Query: 59 RS-RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 S R +L + + I + + ++D+L Sbjct: 61 GSDRRGSYAVLSEGSLLHNFSGIRADAVATGLAANCIRFVEAVDIDPSDAAPVHDLLLKT 120 Query: 118 LNCHKIPSVIG-KIFVQIELMLLKNIGFGLDLTKCVVTG 155 L + +G+ D T C G Sbjct: 121 LYMLDAGHGSADFVPWFFRARFAFEMGYNPDFTACGTCG 159 >gi|225570968|ref|ZP_03779991.1| hypothetical protein CLOHYLEM_07072 [Clostridium hylemonae DSM 15053] gi|225160430|gb|EEG73049.1| hypothetical protein CLOHYLEM_07072 [Clostridium hylemonae DSM 15053] Length = 239 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 24/169 (14%), Positives = 51/169 (30%), Gaps = 2/169 (1%) Query: 9 ILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGE 68 +L GE + + ++T++ G+ F R + + + + Sbjct: 2 VLHASPIGEYDRRVVILTKERGKISAFARGARKPHSALVGVTSPFTFGEFTVYEGRTSYT 61 Query: 69 FRFEVLESHCA-KLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI 127 + ++ + + YG + + E L +L L P + Sbjct: 62 LVSASVSNYFSELRVDVEGAYYGFYFLDFAGYYARENSDETLLLKLLYQTLRALTNPHLD 121 Query: 128 GKI-FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 ++ EL + G + +CV + S GG VC Sbjct: 122 NRLVRYIFELKAVAVNGEAPQVFECVRCADKERPAVFSVSKGGLVCSEC 170 >gi|239814411|ref|YP_002943321.1| DNA repair protein RecO [Variovorax paradoxus S110] gi|259563686|sp|C5CSF7|RECO_VARPS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|239800988|gb|ACS18055.1| DNA repair protein RecO [Variovorax paradoxus S110] Length = 257 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 18/122 (14%), Positives = 34/122 (27%), Gaps = 1/122 (0%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + A +L + E ++ILEV TR +GR + + ++ + Sbjct: 9 HEPAYVLHRYDWSESSLILEVFTRHHGRIALVAKGAKRP-SSNFRPVLLPLQPLQLNYGG 67 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + + L G L R L + L+D + Sbjct: 68 DAEIRTLKGAEWMGGHVMPTGEALLSGYYVNELLLRLLARDDAHEALFDAYAGVVQVLAG 127 Query: 124 PS 125 Sbjct: 128 DH 129 >gi|332706215|ref|ZP_08426284.1| DNA replication and repair protein RecO [Lyngbya majuscula 3L] gi|332355052|gb|EGJ34523.1| DNA replication and repair protein RecO [Lyngbya majuscula 3L] Length = 321 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 51/166 (30%), Gaps = 11/166 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN-WRSR 61 ++ I L GE + ++ ++TR+ G + + + ++G V ++ Sbjct: 5 YKATGINLKSIPLGEADRLVTILTRELGLIRVVAPGARKQKSKLGGRSGLFVVNQLLLAK 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + E ES+ S + +P ELY++LN L Sbjct: 65 GRSLDKIIQAETTESYPGLSQELSKLAASQYLAELVLCHALSEQPQEELYELLNEHLRRL 124 Query: 122 KIPSVI----------GKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + I LL G + C +T T Sbjct: 125 EQLPKITANPSGLSLVLAHLSHGVFHLLALAGIAPQVQLCCITQHT 170 >gi|50085653|ref|YP_047163.1| DNA repair protein [Acinetobacter sp. ADP1] gi|49531629|emb|CAG69341.1| DNA repair protein [Acinetobacter sp. ADP1] Length = 236 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 33/241 (13%), Positives = 71/241 (29%), Gaps = 27/241 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T +YGR G +R + + Sbjct: 7 HGYLIHHRRYREKSHIVHLFTEEYGRIDGILRQ----------IPPPQYQPITLQATGKG 56 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + ++ + F G L R P E + + I L ++ + Sbjct: 57 ELKNFTKLEIMNYPVFFHGDAFFAGFYLNEVLLRLCPLEEAMPQTFQQYQIILQQLQLLN 116 Query: 126 VIG-------KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA---VCRSV 175 +I Q E +LL+ +G+ +D L + V + Sbjct: 117 QHQQPAIFLKQILRQFEHVLLQELGYAIDFEIDCNQNQINPLASYQFQPTEGFLPVSQQS 176 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLG 234 L + +++ ++ QL L + + + R+ ++ Sbjct: 177 HLTVSGQLICCMQNYQAGQEFSTEQ-----LQLLGK-LYRQMITSLLGDRPLKSRQLWIQ 230 Query: 235 K 235 Sbjct: 231 N 231 >gi|332703854|ref|ZP_08423942.1| DNA repair protein recO [Desulfovibrio africanus str. Walvis Bay] gi|332554003|gb|EGJ51047.1| DNA repair protein recO [Desulfovibrio africanus str. Walvis Bay] Length = 248 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 51/161 (31%), Gaps = 4/161 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + + +IL V + E + + ++T G F G R + L V +++ Sbjct: 1 MEFTEHGLILKVGRFREYDQWVRLLTPTRGILTAFAFGGSRSRRRFCGCLDALNLVLFKA 60 Query: 61 RLAQNLGEFRFEV---LESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 R ++N+ + E L + + I L F + +YD+ Sbjct: 61 RSSRNMAYLQLEESTLLSGYPRLKANLPKLGMAANCIKFLQAFQLGVDTSRAVYDLTLAT 120 Query: 118 LNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVT 157 L + + GF D C + G Sbjct: 121 LEALDDGGEDQDFWPLFFRAAVAFESGFAPDFKSCHLCGKN 161 >gi|189462929|ref|ZP_03011714.1| hypothetical protein BACCOP_03630 [Bacteroides coprocola DSM 17136] gi|189430356|gb|EDU99340.1| hypothetical protein BACCOP_03630 [Bacteroides coprocola DSM 17136] Length = 240 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 53/173 (30%), Gaps = 5/173 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L Y +K I+ V T Q GR + +S + Q + Q ++V Sbjct: 1 MLQKYVGIVLHTVKYSDKANIVHVYTEQSGRMSFLIPAQRSRKSAVKQVLFQPLSVVEFE 60 Query: 58 WRSRL-AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R + + + + L+R L E + L+ L Sbjct: 61 ADMRPRSGIHPIKEAKAWYVFTSLPYDPYKSAIAMFLAEFLYRALKEETTNIPLFAYLVH 120 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSG 168 + + + + L + +G ++ + + L S Sbjct: 121 SVQWLDVCETSFANFHLVFLMRLSRFLGLYPNVEEYSSSDYFDLLNACFVSSQ 173 >gi|167957341|ref|ZP_02544415.1| DNA repair protein RecO [candidate division TM7 single-cell isolate TM7c] Length = 225 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 52/167 (31%), Gaps = 3/167 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 AI+L +Y E + +L+++T + GR + + R + + R + Sbjct: 8 KAIVLRRTNYAEADRVLQLLTPK-GRRSVIAKGVRRERSKLAGGIELFAICDMVIRSGRG 66 Query: 66 L-GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 G L + +L + + + L E E Y +L+ L P Sbjct: 67 DLGLLTSARLAAFYRHILEDYERMQFAYAAMKLVSTASENIDEPEWYFVLSQVLEQLNNP 126 Query: 125 SVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 V K I + +G L+L V S Sbjct: 127 VVNQKLIETWFYVQYASLLGDELNLRTDVTAQALVPDKKYMYDSAEK 173 >gi|116491020|ref|YP_810564.1| DNA replication and repair protein RecO [Oenococcus oeni PSU-1] gi|290890501|ref|ZP_06553576.1| hypothetical protein AWRIB429_0966 [Oenococcus oeni AWRIB429] gi|122276798|sp|Q04F73|RECO_OENOB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|116091745|gb|ABJ56899.1| DNA replication and repair protein RecO [Oenococcus oeni PSU-1] gi|290479897|gb|EFD88546.1| hypothetical protein AWRIB429_0966 [Oenococcus oeni AWRIB429] Length = 258 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 59/193 (30%), Gaps = 3/193 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + I++ VR Y E + ++++++ G + R + + + ++ Sbjct: 1 MVDKISGIVISVRDYSENDSLIKIISPTIGINTYLARGSKKTKSSLKIATQLFTYGDFFG 60 Query: 61 RLAQNLGEFRFEVLESHC---AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + G ES L L Y L E + Y M Sbjct: 61 KYPKKNGLGYLNSSESTSIFKNISLDIILNAYASHIAELLAAAFDENTNIDQWYFMFFQA 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L I E+ LL G +L + G T+ S + G + + Sbjct: 121 LKKIDAGLDPQVIANVFEIQLLSVFGVEPNLFSDPINGQTEGEFDFSEQYNGILSKKNYH 180 Query: 178 PYAEKMLVLPSFL 190 ++ P + Sbjct: 181 LDDRRLHANPKAI 193 >gi|160900691|ref|YP_001566273.1| DNA repair protein RecO [Delftia acidovorans SPH-1] gi|238687166|sp|A9BNJ3|RECO_DELAS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|160366275|gb|ABX37888.1| DNA repair protein RecO [Delftia acidovorans SPH-1] Length = 256 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 42/125 (33%), Gaps = 3/125 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSR 61 + A +L + E ++ILEV TR GR + + +P+L + +++ Sbjct: 9 DEPAYVLHSYDWSESSLILEVFTRHRGRVALAAKGVKRPTSNFRPVLLPLQPLSLSYSLG 68 Query: 62 LAQNLGEFRFEV-LESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 N + + + GL L R L +P L+D+ + Sbjct: 69 GEGNAEIHTLKGAEWVGGHVMPQGDALMSGLYLNELLMRLLARDDPYAALFDIYAGVVRV 128 Query: 121 HKIPS 125 Sbjct: 129 LAGQH 133 >gi|186684466|ref|YP_001867662.1| DNA repair protein RecO [Nostoc punctiforme PCC 73102] gi|238691195|sp|B2ITL1|RECO_NOSP7 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|186466918|gb|ACC82719.1| DNA repair protein RecO [Nostoc punctiforme PCC 73102] Length = 300 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 52/159 (32%), Gaps = 6/159 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN-WRSR 61 ++ I L + GE + I+ ++T ++G + H ++G V ++ Sbjct: 5 YKASGINLKTQVLGESDKIVTILTPEFGLIRAVAPGARKHNSSLGGRSGMFVVNELLIAK 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + L+++ + +P ELY++ N L+ Sbjct: 65 GRSLDKITQAQTLKTYPGLAKDLGKLAASQYLAEIVLSQALSEQPQEELYELFNEHLHRL 124 Query: 122 KIPSVIGKIFVQIE-----LMLLKNIGFGLDLTKCVVTG 155 + S V LL G + C ++G Sbjct: 125 EALSNANASGVLAHLAHGVFHLLALAGVTPQVQICCLSG 163 >gi|284036117|ref|YP_003386047.1| DNA repair protein RecO [Spirosoma linguale DSM 74] gi|283815410|gb|ADB37248.1| DNA repair protein RecO [Spirosoma linguale DSM 74] Length = 230 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 6/165 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGF---VRNGQSHRMQ-PILQAGNLVRV 56 M + I L Y E +II V T ++G VR +S + + Q L+ + Sbjct: 1 MLQKTRGIALSYIRYRETSIIARVYTEEFGLQSYIINSVRTARSKNNKIALFQPLTLLEM 60 Query: 57 NWRSRLAQNLGEFRFEVLE-SHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + ++L + + L + L E L+ L Sbjct: 61 VVYYKSDRDLTRLSEVKTNYPFQSLPFEVGKSTIAMFVTEMLNKVLKEEAGSPVLFRFLV 120 Query: 116 IFLNCHKI-PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 + + + + L L +GFG + + + ++ Sbjct: 121 ESVVFLEEATTNYENFHLAFLLKLSSFLGFGPESAREFEDQLREN 165 >gi|1001446|dbj|BAA10070.1| slr0181 [Synechocystis sp. PCC 6803] Length = 260 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 18/174 (10%), Positives = 50/174 (28%), Gaps = 6/174 (3%) Query: 15 YGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQNLGEFRFE 72 +GE + ++ + + +YG + + + + + + + + + Sbjct: 6 FGESDRLVTIFSPEYGLIRAIAPGARKPKSSLRGRTELFVVNQFLLFAGKSLDRINQAET 65 Query: 73 VLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFV 132 S+ + G I + E LY++ L + + + I+ Sbjct: 66 Q-YSYPGLGQNVCNLAAGQYLIELILALGTEASAQTSLYELFTEHLRRLETEATVENIYG 124 Query: 133 QIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 + L + G C +T T + + +G + Sbjct: 125 HLAQALFHCLGAEGIAPQFHHCAITAQTISPNFYDRQWRVGFSPELGGIVDLRS 178 >gi|254880796|ref|ZP_05253506.1| DNA repair protein [Bacteroides sp. 4_3_47FAA] gi|294775121|ref|ZP_06740650.1| DNA repair protein RecO [Bacteroides vulgatus PC510] gi|319639806|ref|ZP_07994536.1| DNA repair protein [Bacteroides sp. 3_1_40A] gi|254833589|gb|EET13898.1| DNA repair protein [Bacteroides sp. 4_3_47FAA] gi|294451165|gb|EFG19636.1| DNA repair protein RecO [Bacteroides vulgatus PC510] gi|317388623|gb|EFV69472.1| DNA repair protein [Bacteroides sp. 3_1_40A] Length = 241 Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 21/156 (13%), Positives = 45/156 (28%), Gaps = 5/156 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + I+L Y + + I+++ TR+ GR V +S + + Q +++ Sbjct: 1 MLQKTVGIVLHTLKYNDTSNIVDIYTRENGRASFLVSVPRSRKSAVKTVLFQPLSMIEFE 60 Query: 58 WRSRL-AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R + + + L+R L E L+ L Sbjct: 61 ADYRPMSNLYRIKEAKSWYPFRTLPYDPYKSSIAMFLAEFLYRALREEAENGPLFAYLEH 120 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKC 151 + F + + +G + Sbjct: 121 SIRWLDECDRSFSNFHLVFLMRFSRFLGLYPNTEDY 156 >gi|323697786|ref|ZP_08109698.1| DNA repair protein RecO [Desulfovibrio sp. ND132] gi|323457718|gb|EGB13583.1| DNA repair protein RecO [Desulfovibrio desulfuricans ND132] Length = 252 Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 43/159 (27%), Gaps = 4/159 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M + A++L + E ++ + ++T G GF G R + L + V Sbjct: 1 MSATEKALVLKTGRFREADVWVRLLTPSRGIFNGFAFGGSRSRRRFVGCLDPLSHVLFTI 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC--LELYDMLNI 116 + L + ++ + V + +L Sbjct: 61 GTNKTGAYTVLEEGTLLHNFPEVRKDPARTGLAVNCVKFVEAVEIDPSDAKPAYDLLLET 120 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 L ++GF D +C V G Sbjct: 121 LHMLEAGGGSSDFTPWLFRARLAFDLGFTPDFLRCGVCG 159 >gi|323343847|ref|ZP_08084074.1| recombination protein O [Prevotella oralis ATCC 33269] gi|323095666|gb|EFZ38240.1| recombination protein O [Prevotella oralis ATCC 33269] Length = 242 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 22/163 (13%), Positives = 49/163 (30%), Gaps = 5/163 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + AI+ +G+ +I+++ T GR + ++ + + Q+ ++ + Sbjct: 1 MLIKTKAIVFHSLKFGDAQLIVDLFTEACGRVSFIQQISKNPKAKIKKQFFQSLTILEIE 60 Query: 58 WRSRLAQNLGEFRFEVLE-SHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + R L + +E L L+ + L+ + Sbjct: 61 FDFRQNAKLQRLKNARIETPFSNIPFDPYKLTILLFLADFLYYSTRSEQQNEPLFRYIEA 120 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQ 158 + F + L K IGF +L Sbjct: 121 SIKWLDASQGNIANFHLVFMMRLSKFIGFFPNLDNHDHNIYFD 163 >gi|319400902|gb|EFV89121.1| DNA repair protein RecO [Staphylococcus epidermidis FRI909] Length = 253 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 65/199 (32%), Gaps = 9/199 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + II+ YGE + I+ ++ + R + + V + Sbjct: 1 MLMKQKGIIIKSVDYGESDRIITILNEYGAKIPLMARRAKKVKSGFQANTQLFVYGLFIY 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +G +V+ H L Y + R + E E YD+L L+ Sbjct: 61 NKWRGMGTLNSVDVINQHYELQLDLFESSYASLCAETIDRSMEENEVSKYNYDLLQFVLS 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD--LLWVSPKSGGAVC----- 172 + + V + L + GF C +TG+ L+ S K GA+ Sbjct: 121 KINEGTPAQLMSVIVLLKSMSKFGFTASFDHCAITGIQDQSKLIAYSFKYDGAISESALY 180 Query: 173 -RSVGLPYAEKMLVLPSFL 190 + + L L + L Sbjct: 181 QDQHAFQLSNRTLYLLNIL 199 >gi|242242838|ref|ZP_04797283.1| recombination protein RecO [Staphylococcus epidermidis W23144] gi|242233739|gb|EES36051.1| recombination protein RecO [Staphylococcus epidermidis W23144] Length = 253 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 65/199 (32%), Gaps = 9/199 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + II+ YGE + I+ ++ + R + + V + Sbjct: 1 MLMKQKGIIIKSVDYGESDKIITILNEYGAKIPLMARRAKKVKSGFQANTQLFVYGLFIY 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +G +V+ H L Y + R + E E YD+L L+ Sbjct: 61 NKWRGMGTLNSVDVINQHYELQLDLFESSYASLCAETIDRSMEENEVSKYNYDLLQFVLS 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD--LLWVSPKSGGAVC----- 172 + + V + L + GF C +TG+ L+ S K GA+ Sbjct: 121 KINEGTPAQLMSVIVLLKSMSKFGFTASFDHCAITGIQDQSKLIAYSFKYDGAISESALY 180 Query: 173 -RSVGLPYAEKMLVLPSFL 190 + + L L + L Sbjct: 181 QDQHAFQLSNRTLYLLNIL 199 >gi|332638282|ref|ZP_08417145.1| DNA replication and repair protein RecO [Weissella cibaria KACC 11862] Length = 264 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 81/201 (40%), Gaps = 4/201 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 DAI++ + EK+++++++T+Q G+ + +++NG+S R Q L + L Sbjct: 6 DAIVMYQQDRKEKDLMVKMLTKQGGKRMFYIKNGKSKRYQFAADVQPLTVATFEGTLNPT 65 Query: 66 LGEFRFEVLESHCA--KLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 F V ESH + ++ + Y + + + +P + Y+ + + + Sbjct: 66 GLSFINAVKESHQSRELMMDVTKNAYMTYILGLIDAAFVDNQPIGKWYEWARLAIEKIER 125 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I E+ LL G +CVV G L S K G +C+ ++M Sbjct: 126 GLDPQGIANFFEIKLLPAFGLEPTWGECVVCGRRDLPLDFSEKLNGTLCQLHWDQDEQRM 185 Query: 184 LVLPS--FLWKEEQTIDADSL 202 P + + ID L Sbjct: 186 NANPRSVRVLSQLNKIDLKQL 206 >gi|167749634|ref|ZP_02421761.1| hypothetical protein EUBSIR_00592 [Eubacterium siraeum DSM 15702] gi|167657387|gb|EDS01517.1| hypothetical protein EUBSIR_00592 [Eubacterium siraeum DSM 15702] Length = 254 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 42/153 (27%), Gaps = 2/153 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR- 59 M +++G R GE + L++ T + G + + A + Sbjct: 1 MLITLKGLVIGQRIIGENSCFLDLFTDKLGMIEVMAHGAKKIGGKNSGAASLFSYATFCV 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM-LNIFL 118 SR ++ E + S + E +L + Sbjct: 61 SRSSKGYTLNSAEPICSFYNISADIEALSLAAYFADIIKYCATSEEEHEDLLRFTCMTYF 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKC 151 K + I E L IGF DL C Sbjct: 121 QLEKQKLPLRFIKAIFEFRFLSRIGFMPDLRAC 153 >gi|313896076|ref|ZP_07829630.1| DNA repair protein RecO [Selenomonas sp. oral taxon 137 str. F0430] gi|312975501|gb|EFR40962.1| DNA repair protein RecO [Selenomonas sp. oral taxon 137 str. F0430] Length = 242 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 69/202 (34%), Gaps = 3/202 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + + IILG +++GE + ++ V TR+ G + R V +++ Sbjct: 1 MLYTAEGIILGAKNWGEADKVMTVFTRERGMLRAAAFGCRRPRSALAGAMQMFVHADFQL 60 Query: 61 RLAQNLGEFRFEVLESHCAKLL-SSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 L + V+ +H AKL + Y + FLPE P + +D L L Sbjct: 61 AEGPRLETVKTAVVRAHHAKLSADLTALAYATFVAEVVREFLPEGVPDEQFFDRLAEILT 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG-VTQDLLWVSPKSGGAVCRSVGLP 178 + + + +L G +C+ G + GGA+C S Sbjct: 121 AFERRNPRVAALAAVLQ-ILSAAGLRQTYERCLHCGTEITGDAFFHAGEGGALCPSCRTA 179 Query: 179 YAEKMLVLPSFLWKEEQTIDAD 200 A L ++ Sbjct: 180 DAADFPAELRELLTGLSALNWA 201 >gi|242373871|ref|ZP_04819445.1| recombination protein RecO [Staphylococcus epidermidis M23864:W1] gi|242348425|gb|EES40027.1| recombination protein RecO [Staphylococcus epidermidis M23864:W1] Length = 253 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 68/209 (32%), Gaps = 10/209 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + II+ YGE + I+ ++ + R + + V + Sbjct: 1 MLMKQKGIIIKSVDYGESDKIITILNEYGAKIPLMARRAKKVKSGLQAHTQMFVYGLFIY 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +G +V+ H L Y + R + E E Y++L+ L Sbjct: 61 NKWRGMGTLNSVDVINQHYELQLDLYESSYASLCAETIERSMEENEVSKYNYELLHFVLT 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD--LLWVSPKSGGAVCRSVGL 177 + + + + L + GF +CV+TG L+ S K GA+ + V Sbjct: 121 KISEGTSAQLMSIVVLLKCMAKFGFTASFNRCVITGNDDQSKLMGYSFKFDGAISQEVA- 179 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAF 206 P L +++ + Sbjct: 180 ------YQDPHALKLTNRSLYLLDILQKL 202 >gi|289750962|ref|ZP_06510340.1| DNA repair protein recO [Mycobacterium tuberculosis T92] gi|289691549|gb|EFD58978.1| DNA repair protein recO [Mycobacterium tuberculosis T92] Length = 148 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 30/91 (32%), Gaps = 3/91 (3%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN 57 M ++D A++L GE + I+ ++TR +G + + + L+ + V Sbjct: 33 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 92 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFL 88 ++ V + Sbjct: 93 LHPGRNLDIVTQVVSVDAFATDIVADYGPLH 123 >gi|215427738|ref|ZP_03425657.1| DNA repair protein RecO [Mycobacterium tuberculosis T92] Length = 124 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 30/91 (32%), Gaps = 3/91 (3%) Query: 1 MY-WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVN 57 M ++D A++L GE + I+ ++TR +G + + + L+ + V Sbjct: 9 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 68 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFL 88 ++ V + Sbjct: 69 LHPGRNLDIVTQVVSVDAFATDIVADYGPLH 99 >gi|254411982|ref|ZP_05025757.1| DNA repair protein RecO [Microcoleus chthonoplastes PCC 7420] gi|196180948|gb|EDX75937.1| DNA repair protein RecO [Microcoleus chthonoplastes PCC 7420] Length = 289 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 25/188 (13%), Positives = 49/188 (26%), Gaps = 11/188 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN-WRSR 61 + I L GE + ++ ++T ++G + + + G V + Sbjct: 5 YNATGINLKSMPLGEADRLVTILTPEWGLIRVVAPGSRKQNSKLAGRMGLFVVNQLLIYK 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + E LES+ + +P ELY + N L Sbjct: 65 GRSLDKITQAETLESYPGLAKDLGKLAASQYLAELVLCHALSEQPQAELYALFNEHLRRL 124 Query: 122 KIPSVIGKIF----------VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAV 171 + + Q LL G + +C ++ + Sbjct: 125 EQLPPLSSSHSGTSLLLAHLCQGIFHLLALAGIAPQVQQCCISQHPIQPDFTDQNWQVGF 184 Query: 172 CRSVGLPY 179 G Y Sbjct: 185 SVEAGGTY 192 >gi|291557708|emb|CBL34825.1| DNA repair protein RecO [Eubacterium siraeum V10Sc8a] Length = 254 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 42/153 (27%), Gaps = 2/153 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR- 59 M +++G R GE + L++ T + G + + A + Sbjct: 1 MLITLKGLVIGQRIIGENSCFLDLFTDKLGMIEVMAHGAKKIGGKNSGAASLFSYATFCV 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM-LNIFL 118 SR ++ E + S + E +L + Sbjct: 61 SRSSKGYTLNSAEPICSFYNISADIEALSLAAYFADIIKYCATSEEEHEDLLRFTCMTYF 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKC 151 K + I E L IGF DL C Sbjct: 121 QLEKQKLPLRFIKAIFEFRFLSRIGFMPDLRAC 153 >gi|291530787|emb|CBK96372.1| DNA repair protein RecO [Eubacterium siraeum 70/3] Length = 254 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 42/153 (27%), Gaps = 2/153 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR- 59 M +++G R GE + L++ T + G + + A + Sbjct: 1 MLITLKGLVIGQRIIGENSCFLDLFTDKLGMIEVMAHGAKKIGGKNSGAASLFSYATFCV 60 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM-LNIFL 118 SR ++ E + S + E +L + Sbjct: 61 SRSSKGYTLNSAEPICSFYNISADIEALSLAAYFADIIKYCATSEEEHEDLLRFTCMTYF 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKC 151 K + I E L IGF DL C Sbjct: 121 QLEKQKLPLRFIKAIFEFRFLSRIGFMPDLRAC 153 >gi|160891427|ref|ZP_02072430.1| hypothetical protein BACUNI_03877 [Bacteroides uniformis ATCC 8492] gi|156858834|gb|EDO52265.1| hypothetical protein BACUNI_03877 [Bacteroides uniformis ATCC 8492] Length = 242 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 48/163 (29%), Gaps = 5/163 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L Y + ++I ++ T GR V +S + + Q LV + Sbjct: 1 MLQKTLGIVLHTLKYKDTSLIADIYTEVAGRASFMVSIPRSRKAAVKPVLFQPLALVELE 60 Query: 58 WRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R + + + + L L L+R + E L+ L Sbjct: 61 ADFRPNATIYKVKEAKSLYPFATLPYDPYKSAIALFLSEFLYRAVREEAENRPLFAYLYH 120 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 + + + L + +G +L Sbjct: 121 SVIWLDECREGFANFHLVFLMRLSRFLGLYPNLEDYHAGDYFD 163 >gi|282882452|ref|ZP_06291073.1| DNA repair protein RecO [Peptoniphilus lacrimalis 315-B] gi|281297594|gb|EFA90069.1| DNA repair protein RecO [Peptoniphilus lacrimalis 315-B] Length = 230 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 53/145 (36%), Gaps = 1/145 (0%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I++ R +GE + IL++ T++ G + S + + + V + R +N Sbjct: 9 EGIVIYERKHGESSKILKIFTKELGNISIMAKGSCSPKSSILSLSQVFVEGLYLFRPGRN 68 Query: 66 LGEFRFEVLESHCAKLLSSSL-FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + L + +L ++ Y + + + + +Y +L+ L Sbjct: 69 FYYIKSGRLINSNYELRNNFTNLCYASLILEIVEKSTLQSSSLNNIYRLLSKILRILCSS 128 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLT 149 + L + +G+ L+ Sbjct: 129 KDPLAKTMAFILKFMSFMGYRPILS 153 >gi|300813867|ref|ZP_07094172.1| DNA repair protein RecO [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512054|gb|EFK39249.1| DNA repair protein RecO [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 230 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 53/145 (36%), Gaps = 1/145 (0%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I++ R +GE + IL++ T++ G + S + + + V + R +N Sbjct: 9 EGIVIYERKHGESSKILKIFTKELGNISIMAKGSCSPKSSILSLSQVFVEGLYLFRPGRN 68 Query: 66 LGEFRFEVLESHCAKLLSSSL-FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + L + +L ++ Y + + + + +Y +L+ L Sbjct: 69 FYYIKSGRLINSNYELRNNFTNLCYASLILEIVEKSTLQSSSLNNIYRLLSKILRILCSS 128 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLT 149 + L + +G+ L+ Sbjct: 129 KDPLAKTMAFILKFMSFMGYRPILS 153 >gi|227544910|ref|ZP_03974959.1| recombination protein O [Lactobacillus reuteri CF48-3A] gi|300910063|ref|ZP_07127523.1| recombination protein O [Lactobacillus reuteri SD2112] gi|227185122|gb|EEI65193.1| recombination protein O [Lactobacillus reuteri CF48-3A] gi|300892711|gb|EFK86071.1| recombination protein O [Lactobacillus reuteri SD2112] Length = 261 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 60/172 (34%), Gaps = 2/172 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 II+ + Y E++++++++T + G + FV+N + + + L +N Sbjct: 9 TGIIMYRQDYRERDLLVKMLTDKIGPAMFFVKNAKKRGFRMTADILPFTHGTYIGSLDEN 68 Query: 66 --LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + S Y + + + ++ + L+ + Sbjct: 69 GLSFINTASDTSQYKNIASDISKNAYVTYILALVDSAFNDGRSIGGWFNQVAAALDLIEK 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 I IE LL G +CVV G L S + GG +C++ Sbjct: 129 GLDGQIITNIIETQLLVAFGVAPIWDRCVVCGRNDLALDFSEQYGGMLCQNH 180 >gi|20532223|sp|Q8XIU9|RECO_CLOPE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O Length = 246 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 63/209 (30%), Gaps = 4/209 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RSR 61 + +I+ + Y E + +L + T + G+ + + + + L ++ + Sbjct: 4 IESGGVIIKAQDYKENDKLLWIFTEKMGKITAIAKGAKKSKSKLFSLTHPLCYGDYLLFK 63 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 ++ S L Y + L + E LY L Sbjct: 64 GKGLYRLSEGKIRTSFQTSLTDLEKLTYASYLCELIDISLQDEEENFNLYKEFITCLYLI 123 Query: 122 KIP-SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 + EL LLK G+GL CV L + S Sbjct: 124 NTEAISYELLIRAFELKLLKYTGYGLRFDNCVFC--KNKLSVSNYISLRYFGGVCDKCPK 181 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLT 209 E L + + + ++ SL ++LT Sbjct: 182 EHGLYINKATYNALRFLNNTSLDKVYRLT 210 >gi|255010095|ref|ZP_05282221.1| DNA repair protein RecO [Bacteroides fragilis 3_1_12] gi|313147890|ref|ZP_07810083.1| DNA repair protein [Bacteroides fragilis 3_1_12] gi|313136657|gb|EFR54017.1| DNA repair protein [Bacteroides fragilis 3_1_12] Length = 242 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 49/163 (30%), Gaps = 5/163 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L + Y + + I+E+ T GR V +S + + Q L+ Sbjct: 1 MLQKTVGIVLHILKYNDTSNIVEMYTELSGRASFLVAVPRSKKAAVKSVLFQPLALIEFE 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNI 116 R +L + S A + L L+R + E L+ L Sbjct: 61 ADYRPNTSLFRIKEAKSFSPFASIPYDPFKSAIALFLAEFLYRAIREEAENRPLFAYLQH 120 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 + + + L + +G +L Sbjct: 121 SILWLDACKISFANFHLVFLMRLSRFLGLYPNLDDYHTGDYFD 163 >gi|254448819|ref|ZP_05062275.1| DNA repair protein RecO [gamma proteobacterium HTCC5015] gi|198261509|gb|EDY85798.1| DNA repair protein RecO [gamma proteobacterium HTCC5015] Length = 206 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 73/214 (34%), Gaps = 12/214 (5%) Query: 22 LEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKL 81 +E+++R G+ ++ R L+ NL+ + R R + + Sbjct: 1 MELLSRSAGKVSAVAPGARNRRKNFSLEPFNLLDIACRGRGSLLTLSRAEPFGQYWA--- 57 Query: 82 LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK---IPSVIGKIFVQIELML 138 L+ GL + L FL E + EL+D +I L+ K + + EL L Sbjct: 58 LAGESLYCGLYANELLSYFLAEGDAQPELFDRYSILLSDLKGATERGDRERCLREFELDL 117 Query: 139 LKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTID 198 L +GF +D ++ + ++ + L + + D Sbjct: 118 LWLLGFSIDFSQDINEDEIVAETRYGLRADAGFYPLASSGSESVSGSVIGKLRQRQ--WD 175 Query: 199 ADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENF 232 +SL +A ++ + + RE F Sbjct: 176 EESLLAAKRICRELIAFHL----NGRVLHSRELF 205 >gi|331083114|ref|ZP_08332231.1| DNA repair protein RecO [Lachnospiraceae bacterium 6_1_63FAA] gi|330405116|gb|EGG84653.1| DNA repair protein RecO [Lachnospiraceae bacterium 6_1_63FAA] Length = 247 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 71/194 (36%), Gaps = 4/194 (2%) Query: 1 MY--WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW 58 M ++L GE + L ++TR+ G+ F + + + + V ++ Sbjct: 1 MNDFITVTGMVLSAMPVGEYDKRLVILTREKGKITVFAKGARRQNSTMMAVSNPFVFGSF 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSS-LFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + R ++++ ++L YG + + E ++ ++L I Sbjct: 61 LIYEGRTAYQLRSASVKNYFSELAGIQPEVYYGFYFLELADFYARENTDEKDMLNLLYIT 120 Query: 118 LNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + I EL + G + C G T++L W S + G C++ G Sbjct: 121 LKALIAQRIEPMLIRYIFELKTVAINGEAPYVFACEECGTTEELQWFSVREAGVFCKNCG 180 Query: 177 LPYAEKMLVLPSFL 190 M + PS L Sbjct: 181 NGKKGVMYISPSAL 194 >gi|308177457|ref|YP_003916863.1| DNA repair protein RecO [Arthrobacter arilaitensis Re117] gi|307744920|emb|CBT75892.1| DNA repair protein RecO [Arthrobacter arilaitensis Re117] Length = 249 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 29/207 (14%), Positives = 58/207 (28%), Gaps = 5/207 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 + ++L GE + I+ ++T G + + S RM L+ V Sbjct: 11 YHTRGLVLRTHKLGEADRIITLLTP-QGIVRAVAKGVRRTSSRMGATLEPFMEVDALMVM 69 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC-LELYDMLNIFLN 119 ++ ++ + + L + Y + + + Sbjct: 70 GRNLDIVSQAQLRNSYGQLLVMDYPSYTVANAMSEIAEKLLEAESDSTQQQYQLFHGAIA 129 Query: 120 CH-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 K G + L L G+ T CV G V + GG VC + Sbjct: 130 LLSKQRVDSGAVLDSYILRALSVAGWAPSFTSCVRCGAPGPHQAVHVQLGGVVCTNCRPS 189 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSA 205 + + + D ++ A Sbjct: 190 GSLSPHPITIGYLQALLEGDWATVAEA 216 >gi|262368559|ref|ZP_06061888.1| recombinational DNA repair protein [Acinetobacter johnsonii SH046] gi|262316237|gb|EEY97275.1| recombinational DNA repair protein [Acinetobacter johnsonii SH046] Length = 236 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 25/177 (14%), Positives = 52/177 (29%), Gaps = 17/177 (9%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y E++ I+ + T+++GR G +R Q + + + Sbjct: 7 HGYLIHHRKYRERSHIVHLFTQEHGRVDGILR-------QTPPPQYQPICLQASGKSELK 59 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML-------NIFL 118 ++ + F G L R P + + Sbjct: 60 N---FTKLEIVNQPIFFFGDAFFSGFYLNEILLRLCPLEVQMEQSFAQYAHTLTQLQQLA 116 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + +I Q E LL+++G+ LD + Q L + + Sbjct: 117 QQADPNQFLKQILRQFEHELLEDLGYALDFSTDANQLEIQASLNYIFQLNEGFIPTA 173 >gi|270295443|ref|ZP_06201644.1| DNA repair protein RecO [Bacteroides sp. D20] gi|317478440|ref|ZP_07937601.1| DNA repair protein RecO [Bacteroides sp. 4_1_36] gi|270274690|gb|EFA20551.1| DNA repair protein RecO [Bacteroides sp. D20] gi|316905399|gb|EFV27192.1| DNA repair protein RecO [Bacteroides sp. 4_1_36] Length = 242 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 48/163 (29%), Gaps = 5/163 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L Y + ++I ++ T GR V +S + + Q LV + Sbjct: 1 MLQKTLGIVLHTLKYKDTSLIADIYTEVAGRASFMVSIPRSRKAAVKPVLFQPLALVELE 60 Query: 58 WRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R + + + + L L L+R + E L+ L Sbjct: 61 ADFRPNATIYKVKEAKSLYPFATLPYDPYKSAIALFLSEFLYRAVREEAENRPLFAYLYH 120 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 + + + L + +G +L Sbjct: 121 SVIWLDECREGFANFHLVFLMRLSRFLGLYPNLEDYHAGDYFD 163 >gi|260589682|ref|ZP_05855595.1| DNA repair protein RecO [Blautia hansenii DSM 20583] gi|260539922|gb|EEX20491.1| DNA repair protein RecO [Blautia hansenii DSM 20583] Length = 247 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 71/194 (36%), Gaps = 4/194 (2%) Query: 1 MY--WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW 58 M ++L GE + L ++TR+ G+ F + + + + V ++ Sbjct: 1 MNDFITVTGMVLSAMPVGEYDKRLVILTREKGKITVFAKGARRQNSTMMAVSNPFVFGSF 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSS-LFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + R ++++ ++L YG + + E E+ ++L I Sbjct: 61 LIYEGRTAYQLRSASVKNYFSELAGIQPEVYYGFYFLELADFYARENIDEKEVLNLLYIT 120 Query: 118 LNCHKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + I EL + G + C G T++L W S + G C++ G Sbjct: 121 LKALIAQRIEPMLIRYIFELKTVAINGEAPYVFACEECGTTEELQWFSVREAGVFCKNCG 180 Query: 177 LPYAEKMLVLPSFL 190 M + PS L Sbjct: 181 NGKKGVMYISPSAL 194 >gi|295099667|emb|CBK88756.1| DNA repair protein RecO [Eubacterium cylindroides T2-87] Length = 244 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 27/202 (13%), Positives = 61/202 (30%), Gaps = 8/202 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRLA 63 + I+L V+ Y E + I+ ++T+ R Q + + I Q + VR + Sbjct: 8 EGIVLSVQDYRESDGIIRLLTQDK-ILSILARGIQKQTSKNRMITQVFSHVRYTIEQKEN 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + V++SH + + RF +Y + + L + Sbjct: 67 GLSLLYYGNVIDSHYKIMEDLMKSSICFVLAEVITRF----HGNPTIYMLFDKCLKEFQN 122 Query: 124 PSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + + +++ G + C++ L +S GG +C + Sbjct: 123 DDAKAYNYACLLLAQIIQKEGIAPFVDGCILCKRKDHLETLSVTDGGFLCTTCNHDRILP 182 Query: 183 MLVLPSFLWKEEQTIDADSLKS 204 + + Sbjct: 183 RSKQEMIQIRSLFKANEKDFTQ 204 >gi|148543970|ref|YP_001271340.1| DNA replication and repair protein RecO [Lactobacillus reuteri DSM 20016] gi|184153365|ref|YP_001841706.1| DNA repair protein RecO [Lactobacillus reuteri JCM 1112] gi|227364883|ref|ZP_03848929.1| recombination protein O [Lactobacillus reuteri MM2-3] gi|325682492|ref|ZP_08162009.1| recombination protein O [Lactobacillus reuteri MM4-1A] gi|166918731|sp|A5VJH9|RECO_LACRD RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|229485535|sp|B2G6Z4|RECO_LACRJ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|148531004|gb|ABQ83003.1| DNA replication and repair protein RecO [Lactobacillus reuteri DSM 20016] gi|183224709|dbj|BAG25226.1| DNA repair protein RecO [Lactobacillus reuteri JCM 1112] gi|227070087|gb|EEI08464.1| recombination protein O [Lactobacillus reuteri MM2-3] gi|324978331|gb|EGC15281.1| recombination protein O [Lactobacillus reuteri MM4-1A] Length = 261 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 61/181 (33%), Gaps = 2/181 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 II+ + Y E++++++++T + G + FV+N + + + L +N Sbjct: 9 TGIIMYRQDYRERDLLVKMLTDKIGPAMFFVKNAKKRGFRMTADILPFTHGTYIGSLDEN 68 Query: 66 --LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + S Y + + + + + L+ + Sbjct: 69 GLSFINTASDTSQYKKIASDISKNAYVTYILALVDSAFNDGRSIGGWFKQVAAALDLIEK 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I IE LL G +CVV G L S + GG +C++ ++ Sbjct: 129 GLDEQIITNVIETQLLVAFGVAPVWDRCVVCGRNDLALDFSEQYGGMLCQNHWSLDEHRL 188 Query: 184 L 184 Sbjct: 189 Y 189 >gi|86609992|ref|YP_478754.1| DNA repair protein RecO [Synechococcus sp. JA-2-3B'a(2-13)] gi|119361495|sp|Q2JIQ7|RECO_SYNJB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|86558534|gb|ABD03491.1| DNA repair protein RecO [Synechococcus sp. JA-2-3B'a(2-13)] Length = 285 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 23/165 (13%), Positives = 51/165 (30%), Gaps = 13/165 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGN-----LVR 55 ++ I L GE + I+ ++TR+ G + + ++ ++ +VR Sbjct: 6 YRVTGINLKGIPLGEADRIVTILTREQGLIRAVAKGSRKQPSKLGGRMEPFVINDLLMVR 65 Query: 56 VNWRSRLA---QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 W ++ + + E L++ S + + EL+ Sbjct: 66 GRWSAQTETSQRLQRIVQAETLQTFPRLSRSLAHLTAAQYLAEVALLLALPDQAQEELFV 125 Query: 113 MLNIFLNCHKIPSVIG---KIFVQIELMLLKNIGFGLDLTKCVVT 154 +L L + + + LL GF + C Sbjct: 126 VLVEHLERIERAASEQAVLPLLTHGLYHLLALAGFAPQVQACYFC 170 >gi|238060552|ref|ZP_04605261.1| hypothetical protein MCAG_01518 [Micromonospora sp. ATCC 39149] gi|237882363|gb|EEP71191.1| hypothetical protein MCAG_01518 [Micromonospora sp. ATCC 39149] Length = 68 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVN 57 ++DDA++L V+ GE + I+ ++TR++GR R + + L+ V V Sbjct: 9 YRDDAVVLRVQKLGESDRIITLLTRRHGRLRAVARGVRRTTSKFGARLEPFGHVDVQ 65 >gi|255530373|ref|YP_003090745.1| DNA repair protein RecO [Pedobacter heparinus DSM 2366] gi|255343357|gb|ACU02683.1| DNA repair protein RecO [Pedobacter heparinus DSM 2366] Length = 241 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 50/151 (33%), Gaps = 5/151 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + I+L Y E ++I+++ T ++G + + R + +LQ +LV + Sbjct: 1 MLHKTRGIVLKTTLYSESSVIVQIFTEKFGIQSYIINGVKKPRAKISMNMLQPLHLVDMI 60 Query: 58 WRSR-LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + + L L++ + ++ L+D + Sbjct: 61 VYHKANTNIQRVSALRPSPVFRSIPYDIIKSTIVLFLNEVLYKSIRQQTTDEHLFDFIFN 120 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGL 146 + + F L L + +GF Sbjct: 121 AICWFDETEELNVNFHLSFLLKLSRFLGFAP 151 >gi|150003957|ref|YP_001298701.1| DNA repair protein [Bacteroides vulgatus ATCC 8482] gi|254790556|sp|A6L065|RECO_BACV8 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|149932381|gb|ABR39079.1| DNA repair protein [Bacteroides vulgatus ATCC 8482] Length = 241 Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 21/156 (13%), Positives = 46/156 (29%), Gaps = 5/156 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + I+L +Y + + I+++ TR+ GR V +S + + Q +++ Sbjct: 1 MLQKTVGIVLHTLNYNDTSNIVDIYTRENGRASFLVSVPRSRKSAVKTVLFQPLSMIEFE 60 Query: 58 WRSRL-AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R + + + L+R L E L+ L Sbjct: 61 ADYRPMSNLYRIKEAKSWYPFRTLPYDPYKSSIAMFLAEFLYRALREEAENGPLFAYLEH 120 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKC 151 + F + + +G + Sbjct: 121 SIRWLDECDRSFSNFHLVFLMRFSRFLGLYPNTEDY 156 >gi|260438845|ref|ZP_05792661.1| DNA repair protein RecO [Butyrivibrio crossotus DSM 2876] gi|292808684|gb|EFF67889.1| DNA repair protein RecO [Butyrivibrio crossotus DSM 2876] Length = 247 Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 27/210 (12%), Positives = 62/210 (29%), Gaps = 3/210 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA-GNLVRVNWRS 60 + +++ GE + + ++T++ G+ FVR + + + + + Sbjct: 4 QIKVRGMVISSSPIGENDKRVVLLTKEKGKISAFVRGARRPGNHLMAASDSFSFGIFYLM 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 E+ + F E E + +++ + Sbjct: 64 YGRDAYTVVNAEISNFFRELTSDLQKTYTAYYFLELAEYFTVENEDESMMLNLIYASFSA 123 Query: 121 H-KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 K I EL L G + C G + L S G +C++ Sbjct: 124 LVKGRINPRLIRYIFELKTLVINGEYPEFFACRNCGTKEHLTGFSIFHDGILCKNCA-KV 182 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLT 209 ++ ++ + Q I +K+ F Sbjct: 183 SKDVMEINGSTLYALQYIVYSDIKNLFTFV 212 >gi|265764975|ref|ZP_06093250.1| DNA repair protein RecO [Bacteroides sp. 2_1_16] gi|263254359|gb|EEZ25793.1| DNA repair protein RecO [Bacteroides sp. 2_1_16] Length = 242 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 48/163 (29%), Gaps = 5/163 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L V Y + + I+E+ T GR V +S + + Q L+ Sbjct: 1 MLQKTVGIVLHVLKYNDTSNIVEMYTELSGRASFLVTVPRSKKVTVKSVLFQPLALIEFE 60 Query: 58 WRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R +L + + + L L+R + E L+ L Sbjct: 61 ADYRPNTSLFRIKEAKSFSPFTSIPYDPFKSAIALFLAEFLYRAIREEAENRPLFAYLQH 120 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 + + + L + +G +L Sbjct: 121 SILWLDTCKISFANFHLVFLMRLSRFLGLYPNLDDYHAGDYFD 163 >gi|53711591|ref|YP_097583.1| DNA repair protein [Bacteroides fragilis YCH46] gi|60679841|ref|YP_209985.1| DNA repair protein RecO [Bacteroides fragilis NCTC 9343] gi|253564358|ref|ZP_04841815.1| DNA repair protein RecO [Bacteroides sp. 3_2_5] gi|81317086|sp|Q5LIK3|RECO_BACFN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|81608766|sp|Q64ZM7|RECO_BACFR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|52214456|dbj|BAD47049.1| DNA repair protein [Bacteroides fragilis YCH46] gi|60491275|emb|CAH06023.1| possible DNA repair protein RecO [Bacteroides fragilis NCTC 9343] gi|251948134|gb|EES88416.1| DNA repair protein RecO [Bacteroides sp. 3_2_5] gi|301161361|emb|CBW20901.1| possible DNA repair protein RecO [Bacteroides fragilis 638R] Length = 242 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 48/163 (29%), Gaps = 5/163 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L V Y + + I+E+ T GR V +S + + Q L+ Sbjct: 1 MLQKTVGIVLHVLKYNDTSNIVEMYTELSGRASFLVTVPRSKKATVKSVLFQPLALIEFE 60 Query: 58 WRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R +L + + + L L+R + E L+ L Sbjct: 61 ADYRPNTSLFRIKEAKSFSPFTSIPYDPFKSAIALFLAEFLYRAIREEAENRPLFAYLQH 120 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 + + + L + +G +L Sbjct: 121 SILWLDTCKISFANFHLVFLMRLSRFLGLYPNLDDYHAGDYFD 163 >gi|326797482|ref|YP_004315301.1| DNA repair protein recO [Sphingobacterium sp. 21] gi|326548246|gb|ADZ76631.1| DNA repair protein recO [Sphingobacterium sp. 21] Length = 240 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 54/151 (35%), Gaps = 5/151 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + I+L + Y E +++ ++ T ++G + + R + ILQ +L+ + Sbjct: 1 MLHKTRGIVLKITPYAETSVVAQIFTEKFGIQSYLINGVKRARAKIHLNILQPLHLLDLV 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNI 116 + L ++ + L +++ + ++ P +L++ L Sbjct: 61 VYQKTTTGLNRMAEARQLPVFQRIPYDIIKSSMALFITEIIYKSIRQQGPDEKLFEYLFS 120 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGL 146 + F L L K +GF Sbjct: 121 AICWLDSSEETPINFHLAFLLKLTKYLGFYP 151 >gi|325299171|ref|YP_004259088.1| DNA repair protein recO [Bacteroides salanitronis DSM 18170] gi|324318724|gb|ADY36615.1| DNA repair protein recO [Bacteroides salanitronis DSM 18170] Length = 240 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 49/172 (28%), Gaps = 5/172 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM---QPILQAGNLVRVN 57 M + I+L Y +++ I V T Q GR + +S + Q + Q +LV + Sbjct: 1 MLQKHRGIVLHTLKYNDRSNIAHVYTEQGGRMSFLIPAQRSRKSMVRQVLFQPLSLVEFD 60 Query: 58 WRSRLA-QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R + + L L+R L E L L+ L Sbjct: 61 AEVRPHAGLHPVREAKAWHVFQSLPYDPYKSAIALFLAEFLYRALKEEAANLPLFAYLVH 120 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKS 167 + + + L + +G + L S Sbjct: 121 SVQWLDACGKSFANFHLVFLMRLSRFLGLYPNTEDYASGDYFDLLNACFVPS 172 >gi|226951497|ref|ZP_03821961.1| recombinational DNA repair protein (RecF pathway) [Acinetobacter sp. ATCC 27244] gi|226837790|gb|EEH70173.1| recombinational DNA repair protein (RecF pathway) [Acinetobacter sp. ATCC 27244] Length = 235 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 54/168 (32%), Gaps = 17/168 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R + ++ Sbjct: 8 HGYLIHHRRYREKSHIVHLFTQEYGRVDGILRQ----------IPPPQYQPIRLQATGKS 57 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + ++ + F G + R P E + + + L ++ + Sbjct: 58 ELKNLTKLEILNQPVFFHGDAFFAGFYLNEIVLRLCPLEEAMPQTFQQYQLILLQLQLLA 117 Query: 126 VIGKIFVQ-------IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 + E +LL+ +G+ +D + V Q + Sbjct: 118 THEHAPLFLRQILRQFEHVLLQELGYAIDFSIDANQQVIQHEQNYQFQ 165 >gi|218885393|ref|YP_002434714.1| recombination protein O RecO [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756347|gb|ACL07246.1| Recombination protein O RecO [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 506 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 42/159 (26%), Gaps = 4/159 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M + + +I+ + E ++ + ++ G F G R + L N + Sbjct: 1 MEFSEQVLIVRTGRFREADLWVRFLSPTRGLLTAFAFGGCRSRKRFCGCLDLFNRSLLRI 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 +S + L +L + + L L + Sbjct: 61 KSTRGGQYLSIQEGTLLRGPDRLRRDWPRFGAAVNCLKFLEALGCGPEGAAATHQLVEDV 120 Query: 119 NCHKI--PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 V + V L L G+ L C G Sbjct: 121 LELLEGGGPVPDMLPVLFRLRLTAEQGYAPRLDSCASCG 159 >gi|294651019|ref|ZP_06728359.1| DNA repair protein RecO [Acinetobacter haemolyticus ATCC 19194] gi|292823120|gb|EFF81983.1| DNA repair protein RecO [Acinetobacter haemolyticus ATCC 19194] Length = 235 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 54/168 (32%), Gaps = 17/168 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R + ++ Sbjct: 8 RGYLIHHRRYREKSHIVHLFTQEYGRVDGILRQ----------IPPPQYQPIRLQATGKS 57 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + ++ + F G + R P E + + + L ++ + Sbjct: 58 ELKNLTKLEILNQPVFFHGDAFFAGFYLNEIVLRLCPLEEAMPQTFQQYQLILLQLQLLA 117 Query: 126 VIGKIFVQ-------IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 + E +LL+ +G+ +D + V Q + Sbjct: 118 THEHAPLFLRQILRQFEHVLLQELGYAIDFSIDANQQVIQHEQNYQFQ 165 >gi|158337750|ref|YP_001518926.1| DNA repair protein RecO [Acaryochloris marina MBIC11017] gi|229485521|sp|B0C0B6|RECO_ACAM1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|158307991|gb|ABW29608.1| DNA repair protein RecO [Acaryochloris marina MBIC11017] Length = 293 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 51/156 (32%), Gaps = 3/156 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS-R 61 ++ I L +GE + +L ++TR+ G + + + ++ V + + Sbjct: 5 YKATGINLKSMPFGEADRLLTILTREQGLVRAVAPGCRKPKSKLGGRSALFVVNDLMLVQ 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + E LES+ + + +P EL+D+ L Sbjct: 65 GRSLDKIAQAETLESYPGLSQNLAKLTTSQYLAELTLYQALSGQPQTELWDLFCQQLTQL 124 Query: 122 KIPSVIGKIFVQIEL--MLLKNIGFGLDLTKCVVTG 155 + ++ I LL G + C VT Sbjct: 125 QNATLAQVPCCLIHGTLKLLAGAGIAPQVHACCVTH 160 >gi|284928635|ref|YP_003421157.1| DNA replication and repair protein RecO [cyanobacterium UCYN-A] gi|284809094|gb|ADB94799.1| DNA replication and repair protein RecO [cyanobacterium UCYN-A] Length = 278 Score = 66.4 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 22/190 (11%), Positives = 64/190 (33%), Gaps = 4/190 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RSR 61 ++ I+L GE + ++ +++ + G + + ++ ++ + + + Sbjct: 5 YKTTGIVLKSMPLGEADRLIIILSPEKGLIRAIAPSSRKNKSPLSGRSELFMVNQFLIIK 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + E L+ + + + + +P ELY++LN L Sbjct: 65 GHSLDKIAQAETLQFYPGLRKELVKLAAAQYLSELILKLSIDEQPQEELYELLNEHLRRL 124 Query: 122 KIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + S+ ++ + + + G G + +C +T + +P +G Sbjct: 125 EKMSLAENLYGYLAQAIFHFLIVTGIGPQIYQCCLTQEKLTPNFKNPDWQVGFSHEMGGL 184 Query: 179 YAEKMLVLPS 188 L + Sbjct: 185 INLNSLAYTN 194 >gi|241763852|ref|ZP_04761897.1| Recombination protein O RecO [Acidovorax delafieldii 2AN] gi|241366896|gb|EER61310.1| Recombination protein O RecO [Acidovorax delafieldii 2AN] Length = 310 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 4/128 (3%) Query: 2 YWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 D+ A +L + E ++ILEV R +GR + + S +P+L + V + Sbjct: 6 RISDEPAFVLHSYDWSESSLILEVFCRHHGRVALVAKGAKKPSSNFRPVLLPLQPLLVTY 65 Query: 59 RSRLAQNLGEFRFEV-LESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + + + L G+ L R L +P L+D Sbjct: 66 TLGGDGSAEVHTLKGAEWVGGHVMPTGDALLSGMYLNELLLRLLARDDPHPALFDAYAGV 125 Query: 118 LNCHKIPS 125 + Sbjct: 126 VRVLASVH 133 >gi|332977454|gb|EGK14229.1| recombination protein O [Psychrobacter sp. 1501(2011)] Length = 285 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 54/162 (33%), Gaps = 14/162 (8%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A L R Y EK I ++T+++G G + G + + + Sbjct: 8 AYSLHQRPYQEKRSIYYLLTKEHGVLHGIAKKG---------IPQFVPLTLFATGKKSLK 58 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 + ++E+ + + L + LP + +Y+ + + + P Sbjct: 59 TLQQVNIVEAVPSLM--GQQQYAALYLNEITLKLLPVEDSMPVVYEQYSRTIRQLQQPLS 116 Query: 127 IGKIF---VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP 165 + ++ E +L +GF +D + V + W Sbjct: 117 LDQLKLVLRLYEQVLFSELGFAIDFEQDSEQAVIDENQWYYF 158 >gi|194467793|ref|ZP_03073779.1| DNA repair protein RecO [Lactobacillus reuteri 100-23] gi|194452646|gb|EDX41544.1| DNA repair protein RecO [Lactobacillus reuteri 100-23] Length = 261 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 59/172 (34%), Gaps = 2/172 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 II+ + Y E++++++++T + G + FV+N + + + L +N Sbjct: 9 TGIIMYRQDYRERDLLVKMLTDKIGPAMFFVKNAKKRGFRMTADILPFTHGTYIGSLDEN 68 Query: 66 --LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + S Y + + + + + L+ + Sbjct: 69 GLSFINTASDTSQYKKIASDISKNAYVTYILALVDSAFNDGRSIGGWFKQVAAALDLIEK 128 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 I IE LL G +CVV G L S + GG +C++ Sbjct: 129 GLDEQIITNVIETQLLVAFGVAPVWDRCVVCGRNDLALDFSEQYGGMLCQNH 180 >gi|153810739|ref|ZP_01963407.1| hypothetical protein RUMOBE_01123 [Ruminococcus obeum ATCC 29174] gi|149833135|gb|EDM88217.1| hypothetical protein RUMOBE_01123 [Ruminococcus obeum ATCC 29174] Length = 250 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 58/190 (30%), Gaps = 5/190 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 +++ GE + + ++TR+ G+ F + + + A V N+ + Sbjct: 8 QGVVISAMPVGEYDKRIVLLTRERGKISAFAKGARRLNSPFMAAADPFVFGNFTLYEGRT 67 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL--NCHKI 123 + H +L + +Y + L + + L Sbjct: 68 SYNLNQVSVTHHFVELATMQPGVYYGYYFLELADYFGREGTDEKEMMNLLYVTVKALLNS 127 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT---QDLLWVSPKSGGAVCRSVGLPYA 180 I EL + G L +C G ++ + S + G +C S Sbjct: 128 RMDNRLIRCIYELRTMTEQGLCPQLFQCAGCGCEITGEESCFFSQELHGILCESCARGKR 187 Query: 181 EKMLVLPSFL 190 E + PS L Sbjct: 188 EARRISPSAL 197 >gi|223044384|ref|ZP_03614418.1| DNA repair protein RecO [Staphylococcus capitis SK14] gi|222442253|gb|EEE48364.1| DNA repair protein RecO [Staphylococcus capitis SK14] Length = 253 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 65/193 (33%), Gaps = 3/193 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + II+ YGE + I+ ++ + R + + V + Sbjct: 1 MLMKQKGIIIKSVDYGESDKIITILNEYGAKIPLMARRAKKVKSGLQAHTQMFVYGLFIY 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +G +V++ H L Y + R + E E YD+L L+ Sbjct: 61 NKWRGMGTLNSVDVIDQHYELQLDLFESSYASLCTETIERSMEENEVSKYNYDLLYFVLS 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD--LLWVSPKSGGAVCRSVGL 177 + + + + L + GF +CV+TG L+ S K GA+ V Sbjct: 121 KIAEGTSAQLMSIVVLLKCMSKFGFTASFNQCVITGNEDQSKLVGYSFKFDGAISEEVLY 180 Query: 178 PYAEKMLVLPSFL 190 + + L Sbjct: 181 QDSHAFKLTNRSL 193 >gi|299144154|ref|ZP_07037234.1| DNA repair protein RecO [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518639|gb|EFI42378.1| DNA repair protein RecO [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 233 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 22/149 (14%), Positives = 54/149 (36%), Gaps = 1/149 (0%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN-WRS 60 + + I+L + YGE + I+ V +++ G+ + + + + N + + Sbjct: 3 KIRTELIVLSEQKYGESSKIIRVFSKEKGKITILAKGALNAKSPLVSITQLFSHSNAYIN 62 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + +L S+ + + L + E E +++D+ L Sbjct: 63 KGRSFYYIESATILNSNFKIRKKYETLIISSYILELLDKTFLEGEVNKKIFDLTVKTLKI 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLT 149 + + I I + EL + +G+ L Sbjct: 123 IQNINYIMPIILAFELKYITFLGYRPSLE 151 >gi|218961362|ref|YP_001741137.1| hypothetical protein CLOAM1059 [Candidatus Cloacamonas acidaminovorans] gi|167730019|emb|CAO80931.1| hypothetical protein CLOAM1059 [Candidatus Cloacamonas acidaminovorans] Length = 251 Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 62/182 (34%), Gaps = 1/182 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + AI++ Y E ++IL+ TRQ G + + + L + Sbjct: 1 MKNKLLAILIKQSQYSESSLILQYFTRQQGMISVIAKGIRKKNEKQQLLPLCEYELIAYE 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 Q L F + + + SSS + + + + +E +YD+ +L+ Sbjct: 61 PKEQGLWLFSEANITRNFSAYPSSSTWAAAETGLELISHLIISQEDIATIYDLTISYLDY 120 Query: 121 HKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 K IF + + G G L+ C + D+ K+ G LP Sbjct: 121 LKKVERNAILIFWRFLNRITILSGIGNPLSYCCLCKNPLDVPNAYLKTKGGFVCEKCLPE 180 Query: 180 AE 181 Sbjct: 181 IN 182 >gi|329920155|ref|ZP_08276986.1| DNA repair protein RecO [Lactobacillus iners SPIN 1401G] gi|328936609|gb|EGG33053.1| DNA repair protein RecO [Lactobacillus iners SPIN 1401G] Length = 248 Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 61/179 (34%), Gaps = 2/179 (1%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA--Q 64 ++ + Y + +++ ++MT + G ++ G + + + N N+ Sbjct: 10 GLVFKQKKYKDFDVLSKIMTAENGIFTLLIKGGLKPKSRLLPATINFSYGNYLINTNYCG 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 ++V+ Y + + + +P + Y ++ L Sbjct: 70 LSVLRNYKVVHQLEHIYFDFKGNAYANYLLDLVDHAYADYQPLGKNYYLVFNALVKINEG 129 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I +EL LL G + CV +Q + S + GG VC++ +M Sbjct: 130 IDNEIICQMVELKLLSAFGTMPEFRHCVFCDASQGIFDFSLQLGGIVCKNHFGSANTRM 188 >gi|86606064|ref|YP_474827.1| DNA repair protein RecO [Synechococcus sp. JA-3-3Ab] gi|119361494|sp|Q2JQL5|RECO_SYNJA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|86554606|gb|ABC99564.1| DNA repair protein RecO [Synechococcus sp. JA-3-3Ab] Length = 301 Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 28/187 (14%), Positives = 58/187 (31%), Gaps = 14/187 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRV---- 56 ++ I L GE + I+ ++TR+ G + + + ++ + + Sbjct: 6 YRVTGINLKAMPLGEADRIITILTREQGLIRAVAKGSRKQLSKWGGRMEPFVVNDLLVAR 65 Query: 57 -NWRSRLAQNLGEF---RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 W ++ + + E L+S S + +P EL+ Sbjct: 66 GRWSAQTDPSQCLQRIAQAETLQSFPRLGRSLAHLTAAQYLAEVALLLALPNQPQEELFV 125 Query: 113 MLNIFLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVT-QDLLWVSPKSG 168 +L L + + + L + G + C G + SP +G Sbjct: 126 LLVEHLERIEQAPATEAVLPLLVHGLYHLLVVGGVAPSVQACYSCGEELAGEAFFSPHAG 185 Query: 169 GAVCRSV 175 G VC Sbjct: 186 GLVCDPC 192 >gi|312872996|ref|ZP_07733056.1| DNA repair protein RecO [Lactobacillus iners LEAF 2062A-h1] gi|325912081|ref|ZP_08174479.1| DNA repair protein RecO [Lactobacillus iners UPII 143-D] gi|311091518|gb|EFQ49902.1| DNA repair protein RecO [Lactobacillus iners LEAF 2062A-h1] gi|325476031|gb|EGC79199.1| DNA repair protein RecO [Lactobacillus iners UPII 143-D] Length = 248 Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 61/179 (34%), Gaps = 2/179 (1%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA--Q 64 ++ + Y + +++ ++MT + G ++ G + + + N N+ Sbjct: 10 GLVFKQKKYKDFDVLSKIMTAENGIFTLLIKGGLKPKSRLLPATINFSYGNYLINTNYCG 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 ++V+ Y + + + +P + Y ++ L Sbjct: 70 LSVLRNYKVVHQLEHIYFDFKGNAYANYLLDLVDHAYADYQPLGKNYYLVFNALVKINEG 129 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I +EL LL G + CV +Q + S + GG VC++ +M Sbjct: 130 IDNEIICQMVELKLLSAFGTMPEFRHCVFCDASQGIFDFSLQLGGIVCKNHFGSANTRM 188 >gi|259500587|ref|ZP_05743489.1| DNA repair protein RecO [Lactobacillus iners DSM 13335] gi|302191278|ref|ZP_07267532.1| DNA repair protein recO [Lactobacillus iners AB-1] gi|309806596|ref|ZP_07700593.1| DNA repair protein RecO [Lactobacillus iners LactinV 03V1-b] gi|312871774|ref|ZP_07731862.1| DNA repair protein RecO [Lactobacillus iners LEAF 3008A-a] gi|312875542|ref|ZP_07735543.1| DNA repair protein RecO [Lactobacillus iners LEAF 2053A-b] gi|259167971|gb|EEW52466.1| DNA repair protein RecO [Lactobacillus iners DSM 13335] gi|308167016|gb|EFO69198.1| DNA repair protein RecO [Lactobacillus iners LactinV 03V1-b] gi|311088796|gb|EFQ47239.1| DNA repair protein RecO [Lactobacillus iners LEAF 2053A-b] gi|311092716|gb|EFQ51072.1| DNA repair protein RecO [Lactobacillus iners LEAF 3008A-a] Length = 248 Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 61/179 (34%), Gaps = 2/179 (1%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA--Q 64 ++ + Y + +++ ++MT + G ++ G + + + N N+ Sbjct: 10 GLVFKQKKYKDFDVLSKIMTAENGIFTLLIKGGLKPKSRLLPATINFSYGNYLINTNYCG 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 ++V+ Y + + + +P + Y ++ L Sbjct: 70 LSVLRNYKVVHQLEHIYFDFKGNAYANYLLDLVDHAYADYQPLGKNYYLVFNALMKINEG 129 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I +EL LL G + CV +Q + S + GG VC++ +M Sbjct: 130 IDNEIICQMVELKLLSAFGTMPEFRHCVFCDASQGIFDFSLQLGGIVCKNHFGSANTRM 188 >gi|325912662|ref|ZP_08175045.1| DNA repair protein RecO [Lactobacillus iners UPII 60-B] gi|325478083|gb|EGC81212.1| DNA repair protein RecO [Lactobacillus iners UPII 60-B] Length = 248 Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 61/179 (34%), Gaps = 2/179 (1%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA--Q 64 ++ + Y + +++ ++MT + G ++ G + + + N N+ Sbjct: 10 GLVFKQKKYKDFDVLSKIMTAENGIFTLLIKGGLKPKSRLLPATINFSYGNYLINTNYCG 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 ++V+ Y + + + +P + Y ++ L Sbjct: 70 LSVLRNYKVVHQLEHIYFDFKGNAYANYLLDLVDHAYADYQPLGKNYYLVFNALVKINEG 129 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I +EL LL G + CV +Q + S + GG VC++ +M Sbjct: 130 IDNEIICQMVELKLLSAFGTMPEFRHCVFCDASQGIFDFSLQLGGIVCKNHFGSANTRM 188 >gi|312874194|ref|ZP_07734228.1| DNA repair protein RecO [Lactobacillus iners LEAF 2052A-d] gi|311090264|gb|EFQ48674.1| DNA repair protein RecO [Lactobacillus iners LEAF 2052A-d] Length = 248 Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 61/179 (34%), Gaps = 2/179 (1%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA--Q 64 ++ + Y + +++ ++MT + G ++ G + + + N N+ Sbjct: 10 GLVFKQKKYKDFDVLSKIMTAENGIFTLLIKGGLKPKSRLLPATINFSYGNYLINTNYCG 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 ++V+ Y + + + +P + Y ++ L Sbjct: 70 LSVLRNYKVVHQLEHIYFDFKGNAYANYLLDLVDHAYADYQPLGKNYYLVFNALVKINEG 129 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I +EL LL G + CV +Q + S + GG VC++ +M Sbjct: 130 IDNEIICQMVELKLLSAFGTMPEFRHCVFCDASQGIFDFSLQLGGIVCKNHFGSANTRM 188 >gi|300741495|ref|ZP_07071516.1| DNA repair protein RecO [Rothia dentocariosa M567] gi|300380680|gb|EFJ77242.1| DNA repair protein RecO [Rothia dentocariosa M567] Length = 255 Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 18/158 (11%), Positives = 50/158 (31%), Gaps = 6/158 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSR 61 +D A+IL ++ GE + I+ ++T+ G ++ + + L+ ++ Sbjct: 8 RDHALILRTQNLGEADRIIIMLTQNNGVIHAVAKSIRKPNSKFGARLEPYMHTDISLTRG 67 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + ++ A L+ + +I + L + ++ Sbjct: 68 KTNLHIISQTATIHAYTATLMGNYNAYTAANTIAEIAETLNTNSTPHDTNPHYHLTHGAI 127 Query: 122 KIPSVIGKIFVQIELML----LKNIGFGLDLTKCVVTG 155 + +I +K G+ + C Sbjct: 128 ATLAHNKHTPQRILTSYILRAMKFAGWLIFTDTCTYCN 165 >gi|309803173|ref|ZP_07697270.1| DNA repair protein RecO [Lactobacillus iners LactinV 11V1-d] gi|308164681|gb|EFO66931.1| DNA repair protein RecO [Lactobacillus iners LactinV 11V1-d] Length = 248 Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 61/179 (34%), Gaps = 2/179 (1%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA--Q 64 ++ + Y + +++ ++MT + G ++ G + + + N N+ Sbjct: 10 GLVFKQKKYKDFDVLSKIMTAENGIFTLLIKGGLKPKSRLLPATINFSYGNYLINTNYCG 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 ++V+ Y + + + +P + Y ++ L Sbjct: 70 LSVLRNYKVVHQLEHIYFDFKGNAYANYLLDLVDHAYADYQPLGKNYYLVFNALMKINEG 129 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I +EL LL G + CV +Q + S + GG VC++ +M Sbjct: 130 IDNEIICQMVELKLLSAFGTMPEFRHCVFCDASQGIFDFSLQLGGIVCKNHFGSANTRM 188 >gi|314933738|ref|ZP_07841103.1| DNA repair protein RecO [Staphylococcus caprae C87] gi|313653888|gb|EFS17645.1| DNA repair protein RecO [Staphylococcus caprae C87] Length = 253 Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 64/201 (31%), Gaps = 9/201 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + II+ YGE + I+ ++ + R + + V + Sbjct: 1 MLMKQKGIIIKSVDYGESDKIITILNEYGAKIPLMARRAKKVKSGLQAHTQMFVYGLFIY 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +G +V+ H L Y + R + E E YD+L L Sbjct: 61 NKWRGMGTLNSVDVINQHYELQLDLFESSYASLCTETIERSMEENEVSKYNYDLLYFVLT 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD--LLWVSPKSGGAVCRS--- 174 + + + + L + GF +CV+TG L+ S K GA+ Sbjct: 121 KIAEGTSAQLMSIVVLLKCMSKFGFTASFNQCVITGNEDQSKLVGYSFKFDGAISEEVLY 180 Query: 175 ---VGLPYAEKMLVLPSFLWK 192 + L L L K Sbjct: 181 QDPHAFKLTNRSLYLLDILQK 201 >gi|191638503|ref|YP_001987669.1| DNA repair protein recO (Recombination protein O) [Lactobacillus casei BL23] gi|190712805|emb|CAQ66811.1| DNA repair protein recO (Recombination protein O) [Lactobacillus casei BL23] Length = 247 Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 25/182 (13%), Positives = 61/182 (33%), Gaps = 2/182 (1%) Query: 11 GVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS--RLAQNLGE 68 ++Y E +++++++T ++G+ + + + ++ R + Sbjct: 2 SRQNYRESDMLVKILTDRFGKKMFLLNRARKPGFTLGAGILPFTHADYIGEVRESGLSYL 61 Query: 69 FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIG 128 + + +L Y + P+ P ++ + L Sbjct: 62 SAIKNATQYRQISDDITLNAYAAYIFGLIDLAFPDGRPVGFWFNQIKQALYLIDSGLDPQ 121 Query: 129 KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPS 188 I IE+ +LK G + CV+ G L S GG +C++ ++ P Sbjct: 122 IIANVIEVQMLKEYGVEPNWRGCVIDGRADLPLDFSESYGGLLCQNHWDKDPHRLHASPR 181 Query: 189 FL 190 + Sbjct: 182 VI 183 >gi|309810250|ref|ZP_07704095.1| DNA repair protein RecO [Lactobacillus iners SPIN 2503V10-D] gi|308169522|gb|EFO71570.1| DNA repair protein RecO [Lactobacillus iners SPIN 2503V10-D] Length = 248 Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 60/179 (33%), Gaps = 2/179 (1%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA--Q 64 ++ + Y + +++ ++MT + G ++ G + + + N N+ Sbjct: 10 GLVFKQKKYKDFDVLSKIMTAENGIFTLLIKGGLKPKSRLLPATINFSYGNYLINTNYCG 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 ++V+ Y + + + +P + Y ++ L Sbjct: 70 LSVLRNYKVVHQLEHIYFDFKGNAYANYLLDLVDHAYADYQPLGKNYYLVFNALMKINEG 129 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 I +EL LL G + CV +Q + S GG VC++ +M Sbjct: 130 IDNEIICQMVELKLLSAFGTMPEFRHCVFCDASQGIFDFSLPLGGIVCKNHFGSANTRM 188 >gi|317490527|ref|ZP_07949005.1| DNA repair protein RecO [Eggerthella sp. 1_3_56FAA] gi|316910378|gb|EFV32009.1| DNA repair protein RecO [Eggerthella sp. 1_3_56FAA] Length = 256 Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 44/157 (28%), Gaps = 5/157 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN-WRSR 61 + AI+L GE ++IL ++ + + + + V+ +R Sbjct: 6 YDARAIVLRKTKLGESDLILTLLAEDGSQIRAVAKGARKPVSSFAARLELYSVVDLLVAR 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 ++ES+ L R L+ + L+ Sbjct: 66 GRSLDIVKEARLVESNERLRRDIEHAAGAAPMAELLDRVTQMGLENPRLFALTRTALSSL 125 Query: 122 KIPSVIGKIFVQIELMLLKNIGFG---LDLTKCVVTG 155 ++ LLK + F L CV G Sbjct: 126 -GRVDPAQVPAVCAAHLLKTLAFAGLRPSLDVCVSCG 161 >gi|121609301|ref|YP_997108.1| DNA repair protein RecO [Verminephrobacter eiseniae EF01-2] gi|171769489|sp|A1WKD3|RECO_VEREI RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|121553941|gb|ABM58090.1| DNA repair protein RecO [Verminephrobacter eiseniae EF01-2] Length = 254 Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 42/125 (33%), Gaps = 3/125 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSR 61 + A +L + E ++ILEV R GR + + S +P+L + +++ Sbjct: 9 DEPAFVLHSYDWSESSLILEVFCRHQGRVALVAKGAKKPSSNFRPVLLPLQPLWLSYALA 68 Query: 62 LAQNLGEFRFEV-LESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 N + + + L GL L R L +P L+D + Sbjct: 69 ADGNADIHTLKGAEWVGGHVMPTGDALLSGLYLNELLLRLLARSDPHAALFDAYTGVVRV 128 Query: 121 HKIPS 125 Sbjct: 129 LASEH 133 >gi|332678542|gb|AEE87671.1| DNA recombination and repair protein RecO [Francisella cf. novicida Fx1] Length = 232 Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 77/230 (33%), Gaps = 8/230 (3%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLG 67 IL R Y E ++++ V TR++G+ + + + + Q +R + G Sbjct: 8 YILHQRKYRENSLLVSVFTREFGKLSALI--AINKKTTNLYQPLVKLRGQINL-AKKADG 64 Query: 68 EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI 127 + +E + + + L LQ I L L ++ F+ + + Sbjct: 65 LSKIYNIEFVESFYQKTYINLLSLQYINELIYLLLNYSHEEDILFDKYDFILRNIDEANY 124 Query: 128 GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLP 187 + EL LL ++G G+ + + + Q+ G Sbjct: 125 RHLLRMFELELLNSLGQGIYVDSDIDGMLIQNDCNYIILPNGFRKDFS-FAVNSISGSSL 183 Query: 188 SFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 + + + D LK+ ++T ++ Y L R+ + L Sbjct: 184 KKINQPLSSWSNDDLKAISKVTRVCVD-YVLA---GKQLKSRKLLVDYLN 229 >gi|295100849|emb|CBK98394.1| DNA replication and repair protein RecO [Faecalibacterium prausnitzii L2-6] Length = 248 Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 59/182 (32%), Gaps = 3/182 (1%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQ 64 ++L Y E + I+ ++T G ++ + + G + + Sbjct: 6 TPGLVLKETRYKESDRIITLLTPGLGVISASAQSSLRLKSKLFSACGLFCYSEFVLVPGR 65 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPE--REPCLELYDMLNIFLNCHK 122 N+ R +++ + SS + + + L E EL +LN F K Sbjct: 66 NMYTVREADVKNVFHGISSSIEGMSLAMYMAEMASALSPTGDEAAKELRLLLNCFYMISK 125 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV-SPKSGGAVCRSVGLPYAE 181 + + I EL + GF L C G + P G +C S + Sbjct: 126 KKADLRVIKAVFELRTMSECGFLPQLVYCRDCGTYDGPAFYLDPAEGCLLCESCAQKAGK 185 Query: 182 KM 183 K Sbjct: 186 KC 187 >gi|198274302|ref|ZP_03206834.1| hypothetical protein BACPLE_00446 [Bacteroides plebeius DSM 17135] gi|198272792|gb|EDY97061.1| hypothetical protein BACPLE_00446 [Bacteroides plebeius DSM 17135] Length = 241 Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 52/156 (33%), Gaps = 5/156 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM---QPILQAGNLVRVN 57 M + D ++L V Y +K+ I+ + T Q+G + +S + + + +LV V Sbjct: 1 MLQKLDGVVLHVVRYSDKSNIVHIYTCQHGSMSFVIPATRSRKSLVNGALFRPLSLVEVE 60 Query: 58 WRSRLAQNLGEFRFEVLESHC-AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R +L + L + + L L E L+ L Sbjct: 61 ADVRSRTSLPPVKEARLSYPLESVPYDPYKLSIAMFLAEFLSHALREEGKNEPLFAYLVS 120 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDLTKC 151 + S + + L + +GF +L Sbjct: 121 SIRWLDACRSDYANFHLVFLIRLSRFLGFYPNLEDY 156 >gi|325831459|ref|ZP_08164713.1| DNA repair protein RecO [Eggerthella sp. HGA1] gi|325486713|gb|EGC89161.1| DNA repair protein RecO [Eggerthella sp. HGA1] Length = 256 Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 44/157 (28%), Gaps = 5/157 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN-WRSR 61 + AI+L GE ++IL ++ + + + + V+ +R Sbjct: 6 YDARAIVLRKTKLGESDLILTLLAEDGSQMRAVAKGARKPASSFAARLELYSVVDLLVAR 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 ++ES+ L R L+ + L+ Sbjct: 66 GRSLDIVKEARLVESNERLRRDIEHAAGAAPMAELLDRVTQMGLENPRLFALTRTALSSL 125 Query: 122 KIPSVIGKIFVQIELMLLKNIGFG---LDLTKCVVTG 155 ++ LLK + F L CV G Sbjct: 126 -GRVDPAQVPAVCAAHLLKTLAFAGLRPSLDACVSCG 161 >gi|325478390|gb|EGC81505.1| DNA repair protein RecO [Anaerococcus prevotii ACS-065-V-Col13] Length = 255 Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 25/189 (13%), Positives = 62/189 (32%), Gaps = 4/189 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SRLAQ 64 +L Y E + I+EV T ++GR + + + ++VN + + Sbjct: 10 TGFVLREFKYKESSKIVEVFTEKFGRISIIAKGVLKKNAKNLSLTARFMKVNLSLYKSGK 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + + L K S + ++ L + +Y +L+ + + Sbjct: 70 DFYGIKEGRLLETYKKSNKSFDIILYKSAMCDLLLRTIDETQIQTVYTLLDNSFHAFEKA 129 Query: 125 S-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLL--WVSPKSGGAVCRSVGLPYAE 181 IF+ + + G + + C + G + S + +C + Sbjct: 130 RGNYINIFLAFLIKYISFSGLKPNFSTCGICGKIIGRRDGYFSIEEASMICDDDMAKVGD 189 Query: 182 KMLVLPSFL 190 K+ + + + Sbjct: 190 KLYLNHNQI 198 >gi|257439768|ref|ZP_05615523.1| DNA repair protein RecO [Faecalibacterium prausnitzii A2-165] gi|257197788|gb|EEU96072.1| DNA repair protein RecO [Faecalibacterium prausnitzii A2-165] Length = 250 Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 26/181 (14%), Positives = 55/181 (30%), Gaps = 2/181 (1%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQ 64 ++L Y E + IL ++T + G ++ + + G + + Sbjct: 8 TPGLVLKETRYKESDRILTILTPELGVISASAQSSLRLKNKLFSACGLFCYSEFVLLPGR 67 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPE--REPCLELYDMLNIFLNCHK 122 N+ R + + + S+ + + + L E EL +LN + Sbjct: 68 NMYTIREAEVRNVFHGISSTIEGMSLAMYLAEMAAALSPTGEEAAKELRLLLNCLYMISE 127 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + + + EL + GF L C + + G + A K Sbjct: 128 GKTDLHVVKAVFELRTMSECGFLPQLVCCKICEKYDGPAFYLDPQEGILLCEDCAKKAGK 187 Query: 183 M 183 Sbjct: 188 T 188 >gi|208779892|ref|ZP_03247236.1| DNA repair protein RecO [Francisella novicida FTG] gi|208744347|gb|EDZ90647.1| DNA repair protein RecO [Francisella novicida FTG] Length = 232 Score = 64.8 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 70/230 (30%), Gaps = 8/230 (3%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLG 67 IL R Y E ++++ V TR++G+ + + + + Q +R + Sbjct: 8 YILHQRKYRENSLLVSVFTREFGKLSALI--AINKKTTNLYQPLVKLRGQINLAKKADSL 65 Query: 68 EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI 127 + + + L ++ L L+D + L + Sbjct: 66 SKIYNIEFVESFYQKTYINLLSLQYINELIYLLLNYSHEEDVLFDKYDFILRNIDEANYR 125 Query: 128 GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLP 187 + EL LL ++G G+ + + Q+ G Sbjct: 126 -YLLRMFELELLNSLGQGIYVDSDIDGMSIQNDCNYIILPNGFRKDFS-FAVNSISGSSL 183 Query: 188 SFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 + + + D LK+ ++T ++ Y L R+ + L Sbjct: 184 KKINQPLSSWSNDDLKAISKVTRVCVD-YVLA---GKQLKSRKLLVDYLN 229 >gi|298491381|ref|YP_003721558.1| DNA repair protein RecO ['Nostoc azollae' 0708] gi|298233299|gb|ADI64435.1| DNA repair protein RecO ['Nostoc azollae' 0708] Length = 302 Score = 64.8 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 53/163 (32%), Gaps = 13/163 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVR---VNWR 59 +Q I L ++ GE + I+ ++T+++G + H ++G V + + Sbjct: 5 YQATGINLKTQALGESDKIVTILTKEFGLIRAIATGARKHNSSLGGRSGIFVVNQLLISQ 64 Query: 60 SRLAQNLGE-----FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 R +Q + E ++++ + + +P ELY++L Sbjct: 65 GRSSQPATPTLDKITQAETIKTYPSLTKDLGKLTASQYLAEIVLCQALSEQPQTELYELL 124 Query: 115 NIFLNCHKIPSVIGK-----IFVQIELMLLKNIGFGLDLTKCV 152 N L + LL G + C Sbjct: 125 NEHLQRLEALPKTQGLDVVAHLAHGVFHLLALAGLTPQVQFCC 167 >gi|27468171|ref|NP_764808.1| DNA repair protein RecO [Staphylococcus epidermidis ATCC 12228] gi|57867008|ref|YP_188709.1| RecO family DNA repair protein [Staphylococcus epidermidis RP62A] gi|251810983|ref|ZP_04825456.1| recombination protein RecO [Staphylococcus epidermidis BCM-HMP0060] gi|282876008|ref|ZP_06284875.1| DNA repair protein RecO [Staphylococcus epidermidis SK135] gi|293366473|ref|ZP_06613150.1| DNA repair protein RecO family protein [Staphylococcus epidermidis M23864:W2(grey)] gi|38258560|sp|Q8CP22|RECO_STAES RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|67461257|sp|Q5HNY1|RECO_STAEQ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|27315717|gb|AAO04852.1|AE016748_86 DNA repair protein RecO [Staphylococcus epidermidis ATCC 12228] gi|57637666|gb|AAW54454.1| DNA repair protein RecO family [Staphylococcus epidermidis RP62A] gi|251805493|gb|EES58150.1| recombination protein RecO [Staphylococcus epidermidis BCM-HMP0060] gi|281295033|gb|EFA87560.1| DNA repair protein RecO [Staphylococcus epidermidis SK135] gi|291319242|gb|EFE59611.1| DNA repair protein RecO family protein [Staphylococcus epidermidis M23864:W2(grey)] gi|329725324|gb|EGG61807.1| DNA repair protein RecO [Staphylococcus epidermidis VCU144] gi|329737236|gb|EGG73490.1| DNA repair protein RecO [Staphylococcus epidermidis VCU028] Length = 253 Score = 64.8 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 60/178 (33%), Gaps = 3/178 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + II+ YGE + I+ ++ + R + + V + Sbjct: 1 MLMKQKGIIIKSVDYGESDKIITILNEYGAKIPLMARRAKKVKSGLQANTQLFVYGLFIY 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +G +V+ H L Y + R + E E YD+L L+ Sbjct: 61 NKWRGMGTLNSVDVINQHYELQLDLFESSYASLCAETIDRSMEENEVSKYNYDLLQFVLS 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD--LLWVSPKSGGAVCRSV 175 + + V + L + GF C +TG+ L+ S K GA+ S Sbjct: 121 KINEGTPAQLMSVIVLLKNMSKFGFTASFDHCAITGIQDQSKLIAYSFKFDGAISESA 178 >gi|88703549|ref|ZP_01101265.1| DNA repair protein RecO [Congregibacter litoralis KT71] gi|88702263|gb|EAQ99366.1| DNA repair protein RecO [Congregibacter litoralis KT71] Length = 259 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 31/248 (12%), Positives = 73/248 (29%), Gaps = 23/248 (9%) Query: 1 MYWQ-DDAIILGVRSYGEKNIILEVMTRQYGRHLGFV----RNGQSHRMQPILQAGNLVR 55 M Q + +L R + + + +L+V + +GR R + + +LQ + Sbjct: 1 MRVQLEPCYLLHRRPFRDNSELLDVFSVAHGRLGLVARGLSRRRRGGSLGAVLQPFRPLL 60 Query: 56 VNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 +++ + L L L R L E ++ Sbjct: 61 LSFSGKGELLT---LTGAESGGALPPLHGDALLSAFYLNELLLRLLQRFEEQPAIFTAYG 117 Query: 116 IFLNCHKIPSVIGKIF-------VQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPK 166 + + + + E LL+ +G+ ++L G + +D + Sbjct: 118 AAIGDLCDAANHEQERTVLEPALRRFEFRLLEELGYAVNLDVEASRGTPIREDGHYALVP 177 Query: 167 SGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH 226 G + + + + D + +A + + + LQ + + Sbjct: 178 EYGLREIEGDVCGSASSFTGEQIMAIADGRFDGEHAPAAKK-----MARALLQPQLGNAP 232 Query: 227 -LLRENFL 233 R F Sbjct: 233 LRSRSMFE 240 >gi|313114168|ref|ZP_07799720.1| DNA repair protein RecO [Faecalibacterium cf. prausnitzii KLE1255] gi|310623577|gb|EFQ06980.1| DNA repair protein RecO [Faecalibacterium cf. prausnitzii KLE1255] Length = 275 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 20/161 (12%), Positives = 45/161 (27%), Gaps = 2/161 (1%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQ 64 ++L Y E + IL ++T + G ++ + + G + + Sbjct: 33 TTGLVLKETRYKESDRILTILTPELGVISAAAQSSLRLKSKLFSACGLFCYSEFTLVPGR 92 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 N+ R +++ + SS + + P + +L Sbjct: 93 NMYTVREAEVKNVFHGISSSIEGMSLAMYMAEMAMTLSPTGQEAQRELRLLLNCFYMISE 152 Query: 124 PSVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV 163 + I EL + GF + C + Sbjct: 153 SKTDLRVIKAVFELRTMSECGFMPQIVCCRDCSAYDGAAFY 193 >gi|228474004|ref|ZP_04058745.1| DNA repair protein RecO [Capnocytophaga gingivalis ATCC 33624] gi|228274518|gb|EEK13359.1| DNA repair protein RecO [Capnocytophaga gingivalis ATCC 33624] Length = 236 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 28/231 (12%), Positives = 65/231 (28%), Gaps = 9/231 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ----PILQAGNLVRVNW 58 + AI+L + + ++I+ T + G ++ S + + + + + + Sbjct: 2 IRTKAIVLSHLKFRDTSLIVRCYTLE-GVRSYLLKGVLSQKKKALSPAYFEPLSQLELVT 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPL-FRFLPEREPCLELYDMLNIF 117 R +L + + KL S + L + + L E P L+ Sbjct: 61 TERNDGSLEYIKEAKVCFPYKKLQQSVIRSSVLFFLSEIGCSVLQEEHPNPSLFSFWEES 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + ++ + L +G + + + + G S Sbjct: 121 LQWYDRAEYFANFHLKFLVDLTLYLGVLPNTSAMELPYFDLEAGVFVAMHNGHSLMSEQD 180 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLL 228 K + S I + ++ + LN Y Sbjct: 181 SLLLKFFLSHSLEEVCLLKISREE-RNGL--LEQLLNYYLWHLPNFKIPKS 228 >gi|116494997|ref|YP_806731.1| recombinational DNA repair protein (RecF pathway) [Lactobacillus casei ATCC 334] gi|301066559|ref|YP_003788582.1| recombinational DNA repair protein [Lactobacillus casei str. Zhang] gi|116105147|gb|ABJ70289.1| DNA replication and repair protein RecO [Lactobacillus casei ATCC 334] gi|300438966|gb|ADK18732.1| Recombinational DNA repair protein (RecF pathway) [Lactobacillus casei str. Zhang] Length = 247 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 66/194 (34%), Gaps = 4/194 (2%) Query: 11 GVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS--RLAQNLGE 68 ++Y E +++++++T ++G+ + + + ++ R + Sbjct: 2 SRQNYRESDMLVKILTDRFGKKMFLLNRARKPGFTLGAGILPFTHADYIGEVRESGLSYL 61 Query: 69 FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIG 128 + + +L Y + P+ P ++ + L Sbjct: 62 SAIKNATQYRQISDDITLNAYAAYIFGLIDLAFPDGRPVGFWFNQIKQALYLIDSGLDPQ 121 Query: 129 KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPS 188 I IE+ +LK G + CV+ G L S GG +C++ ++ P Sbjct: 122 IIANVIEVQMLKEYGVEPNWRGCVIDGRADLPLDFSESYGGLLCQNHWDKDPHRLHASPR 181 Query: 189 --FLWKEEQTIDAD 200 F + T+D + Sbjct: 182 AIFYLRRFSTLDLN 195 >gi|309775527|ref|ZP_07670527.1| DNA repair protein RecO [Erysipelotrichaceae bacterium 3_1_53] gi|308916621|gb|EFP62361.1| DNA repair protein RecO [Erysipelotrichaceae bacterium 3_1_53] Length = 246 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 61/183 (33%), Gaps = 5/183 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + I++ VR Y E + +L+V+ R + + P +Q L R+ Sbjct: 1 MQEEVCGILVDVREYREHDALLKVLCEDGSLMSLSARGVRKVTSKNAPAVQLFTLARLQL 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + ++ R + + K+ + +Y +L L Sbjct: 61 NYQETSSMQSLRRAEIINSYRKIREDLMKQSIAAYFCECIHKSGFE---DNVYGLLKQSL 117 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + ++ + ++ + G + CV QD+ VS + GG VC+ Sbjct: 118 DILQDAEHPLQLLCLFQAIMNRMHGIEPYVDGCVRCQNMQDIQAVSRRDGGFVCKHCLRS 177 Query: 179 YAE 181 Sbjct: 178 GDH 180 >gi|260642619|ref|ZP_05859466.1| DNA repair protein RecO [Bacteroides finegoldii DSM 17565] gi|260621280|gb|EEX44151.1| DNA repair protein RecO [Bacteroides finegoldii DSM 17565] Length = 164 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 22/149 (14%), Positives = 44/149 (29%), Gaps = 6/149 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M + I+L Y + +II+++ T GR V +S + + Q + + Sbjct: 1 MLQKTKGIVLHTLKYNDTSIIVDIYTELSGRASFLVAVPRSRKAAVKSVLFQPLSFIEFE 60 Query: 58 WRSRLAQNLGEFRF-EVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 R L + + + L L+R + E L+ L Sbjct: 61 ADYRPNATLYRVKEAKSFYPFSSIPYDPYKSAMALFLSEFLYRAIREEAENRPLFAYLQH 120 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFG 145 + + L++ F Sbjct: 121 SIIWLD--ECREGFSNFHLVFLMRLSRFW 147 >gi|317122969|ref|YP_004102972.1| DNA repair protein RecO [Thermaerobacter marianensis DSM 12885] gi|315592949|gb|ADU52245.1| DNA repair protein RecO [Thermaerobacter marianensis DSM 12885] Length = 303 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RSRLAQ 64 + I+L R YGE++ ++ ++ R+ R + + R + + Sbjct: 7 EGIVLRTREYGERDRLVTLVDREGTRRTVLAKGVRRPRSSLAAGVQPYTYSRFLLWKGRS 66 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 G + +VL++ S F E P ++ ++ L Sbjct: 67 LDGVSQVQVLDALTGLRGSLEALAAAAYVAELAEAFTQEGAPSPGVFPVVLQGLRGLAAA 126 Query: 125 SV----IGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 EL LL G G L C G Sbjct: 127 PGDGVAHALWLRHAELRLLDLAGLGPQLDACQDCG 161 >gi|311113587|ref|YP_003984809.1| recombination protein O [Rothia dentocariosa ATCC 17931] gi|310945081|gb|ADP41375.1| recombination protein O [Rothia dentocariosa ATCC 17931] Length = 255 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 17/158 (10%), Positives = 49/158 (31%), Gaps = 6/158 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSR 61 +D A+IL ++ GE + I+ ++T+ G ++ + + L+ ++ Sbjct: 8 RDHALILRTQNLGEADRIIIMLTQNNGVIHAVAKSIRKPNSKFGARLEPYMHTDISLTRG 67 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + ++ L+ + +I + L + ++ Sbjct: 68 KTNLHTISQTATIHAYTVTLMGNYNAYTAANTIAEIAETLNTNSTPHDTNPHYHLTHGAI 127 Query: 122 KIPSVIGKIFVQIELML----LKNIGFGLDLTKCVVTG 155 + +I +K G+ + C Sbjct: 128 ATLAHNKHTPQRILTSYILRAMKLAGWLIFTDTCTYCN 165 >gi|227485435|ref|ZP_03915751.1| DNA repair protein recO (Recombination protein O) [Anaerococcus lactolyticus ATCC 51172] gi|227236565|gb|EEI86580.1| DNA repair protein recO (Recombination protein O) [Anaerococcus lactolyticus ATCC 51172] Length = 258 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 68/214 (31%), Gaps = 9/214 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SRLAQ 64 I+L +Y E + I+EV T G+ + + + + ++ + + Sbjct: 10 RGIVLREFNYKESSKIIEVFTETMGKISISCQGVLKKNSKNLALTTRFILASFDLYKSGK 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 R ++ + K + + +I L + ++ +L + + Sbjct: 70 EFYGLREGIVLNPYYKSNKNFDIILYKSAICDLLLRTIDHIQIGTVFTLLTNSFDAFEEA 129 Query: 125 SVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVT--QDLLWVSPKSGGAVCRSVGLPY 179 LLK I GF + C + G L+ SP A+C Sbjct: 130 KKNQ--VNIFLGFLLKYISFSGFKPNFKTCGICGKNIRGKYLYFSPSESSAICDECKDQI 187 Query: 180 AEKMLV-LPSFLWKEEQTIDADSLKSAFQLTDYF 212 +++ + F++ + +L + + Sbjct: 188 FDRVFMTYEEFVYFNKLLYTKSEELEDIKLVEAY 221 >gi|260886790|ref|ZP_05898053.1| DNA repair protein RecO [Selenomonas sputigena ATCC 35185] gi|330839398|ref|YP_004413978.1| DNA repair protein RecO [Selenomonas sputigena ATCC 35185] gi|260863389|gb|EEX77889.1| DNA repair protein RecO [Selenomonas sputigena ATCC 35185] gi|329747162|gb|AEC00519.1| DNA repair protein RecO [Selenomonas sputigena ATCC 35185] Length = 257 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 48/153 (31%), Gaps = 2/153 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 +A++L R++GE + + ++TR+ GR + + ++ Sbjct: 5 SAEALVLATRNWGEADKMASLLTRECGRVEAAAFGCRRPKSALAAGMQMFSHLDVELTEG 64 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC-LELYDMLNIFLNCHK 122 + R L+ +L + + L L + +D L F + Sbjct: 65 GRVWTVRQCSLKGRFRRLSEDLSAMAYGSFVAELALELFPEHEPAPDAFDRLLQFFCAFE 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + +L G L L CV G Sbjct: 125 ERNPRLVALAAAYQLL-ALAGLSLHLASCVHCG 156 >gi|89256109|ref|YP_513471.1| DNA repair protein recO [Francisella tularensis subsp. holarctica LVS] gi|115314583|ref|YP_763306.1| DNA repair protein RecO [Francisella tularensis subsp. holarctica OSU18] gi|134301757|ref|YP_001121725.1| DNA repair protein RecO [Francisella tularensis subsp. tularensis WY96-3418] gi|167010796|ref|ZP_02275727.1| DNA repair protein RecO [Francisella tularensis subsp. holarctica FSC200] gi|169656567|ref|YP_001428192.2| putative DNA repair protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|187931491|ref|YP_001891475.1| RecFOR complex, RecO component [Francisella tularensis subsp. mediasiatica FSC147] gi|254367434|ref|ZP_04983460.1| DNA repair protein recO [Francisella tularensis subsp. holarctica 257] gi|290954506|ref|ZP_06559127.1| DNA repair protein RecO [Francisella tularensis subsp. holarctica URFT1] gi|295312022|ref|ZP_06802837.1| DNA repair protein RecO [Francisella tularensis subsp. holarctica URFT1] gi|89143940|emb|CAJ79159.1| DNA repair protein recO [Francisella tularensis subsp. holarctica LVS] gi|115129482|gb|ABI82669.1| DNA repair protein RecO [Francisella tularensis subsp. holarctica OSU18] gi|134049534|gb|ABO46605.1| DNA repair protein RecO [Francisella tularensis subsp. tularensis WY96-3418] gi|134253250|gb|EBA52344.1| DNA repair protein recO [Francisella tularensis subsp. holarctica 257] gi|164551635|gb|ABU61236.2| putative DNA repair protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|187712400|gb|ACD30697.1| RecFOR complex, RecO component [Francisella tularensis subsp. mediasiatica FSC147] Length = 232 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 77/230 (33%), Gaps = 8/230 (3%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLG 67 IL R Y E ++++ V TR++G+ + + + + Q +R + G Sbjct: 8 YILHQRKYRENSLLVSVFTREFGKLSALI--AINKKTTNLYQPLVKLRGQINL-AKKADG 64 Query: 68 EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI 127 + +E + + + L LQ I L L ++ F+ + + Sbjct: 65 LSKIYNIEFVESFYQKTYINLLSLQYINELIYLLLNYSHEEDVLFDKYDFILRNIDEANY 124 Query: 128 GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLP 187 + EL LL ++G G+ + + + Q+ G Sbjct: 125 RHLLRMFELELLNSLGQGIYVDSDIDGMLIQNDCNYIILPNGFRKDFS-FAVNSISGSSL 183 Query: 188 SFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 + + + D LK+ ++T ++ Y L R+ + L Sbjct: 184 KKINQPLSSWSNDDLKAISRVTRVCVD-YVLA---GKQLKSRKLLVDYLN 229 >gi|254369112|ref|ZP_04985124.1| DNA repair protein RecO [Francisella tularensis subsp. holarctica FSC022] gi|157122062|gb|EDO66202.1| DNA repair protein RecO [Francisella tularensis subsp. holarctica FSC022] Length = 232 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 77/230 (33%), Gaps = 8/230 (3%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLG 67 IL R Y E ++++ V TR++G+ + + + + Q +R + G Sbjct: 8 YILHQRKYRENSLLVSVFTREFGKLSALI--AINKKTTNLYQPLVKLRGQINL-AKKADG 64 Query: 68 EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI 127 + +E + + + L LQ I L L ++ F+ + + Sbjct: 65 LSKIYNIEFVESFYQKTYINLLSLQYINELIYLLLNYSHEEDVLFDKYDFILRNIDEANY 124 Query: 128 GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLP 187 + EL LL ++G G+ + + + Q+ G Sbjct: 125 RHLLRMFELELLNSLGQGIYVDSDIDGMLIQNNCNYIILPNGFRKDFS-FAVNSISGSSL 183 Query: 188 SFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 + + + D LK+ ++T ++ Y L R+ + L Sbjct: 184 KKINQPLSSWSNDDLKAISRVTRVCVD-YVLA---GKQLKSRKLLVDYLN 229 >gi|291546835|emb|CBL19943.1| DNA replication and repair protein RecO [Ruminococcus sp. SR1/5] Length = 252 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 19/152 (12%), Positives = 46/152 (30%), Gaps = 2/152 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++L G+ + + ++TR+ G+ F + + + A V ++ + Sbjct: 8 QGVVLSAMPVGDYDKRIVLLTRERGKISAFAKGARRQNSPFMAAANPFVFGSFTLYEGRT 67 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL--NCHKI 123 ++ H +L + +Y + L + + + L Sbjct: 68 SYNLNQVSVQHHFVELATRQPGVYYGYYFLELADYFGKEGTDEKEMMNLLYVTIKAILNP 127 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + EL + G L +C G Sbjct: 128 HIEDRLVRCIYELRTMVIQGVMPQLFQCAGCG 159 >gi|300726295|ref|ZP_07059748.1| DNA repair protein RecO [Prevotella bryantii B14] gi|299776492|gb|EFI73049.1| DNA repair protein RecO [Prevotella bryantii B14] Length = 240 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 21/160 (13%), Positives = 52/160 (32%), Gaps = 5/160 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR---NGQSHRMQPILQAGNLVRVNWRS 60 + AI+L + + I++++T + GR + + + Q L+ V + Sbjct: 3 KTRAIVLHSIKFKDSQQIVDMLTEEQGRISFICHVSSSKKGKYKKQFFQPLTLLVVEYDY 62 Query: 61 RLAQNLGEFRFEVLE-SHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R L + +E +C+ + + L + + + L+ ++ + Sbjct: 63 RSNSKLQHLQDIAIEFPYCSVPFDAFKLAISMFMAEFLLYATRDEQQNIPLFSYIHNSMR 122 Query: 120 CHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQ 158 F + L +GF +L + Sbjct: 123 WLDGAVSSFSNFHLVFMMKLSLFLGFYPNLEDYHPGDIFD 162 >gi|210623876|ref|ZP_03294111.1| hypothetical protein CLOHIR_02062 [Clostridium hiranonis DSM 13275] gi|210153302|gb|EEA84308.1| hypothetical protein CLOHIR_02062 [Clostridium hiranonis DSM 13275] Length = 230 Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 59/167 (35%), Gaps = 3/167 (1%) Query: 20 IILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEF-RFEVLESHC 78 +IL + TR G+ + + ++ + A N+ + + + + E+++S Sbjct: 1 MILTIFTRNLGKVSAIAKGAKRNKSALLPSAQLFAYSNFTLKKQRGMYRVSQSEIIKSFY 60 Query: 79 AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS-VIGKIFVQIELM 137 F Y + L E + +L++++ + I EL Sbjct: 61 DISYDIDAFSYASYISRLVENSLLENQTNRKLFNLIVKTMYLLSQKDVDKEFITAAFELK 120 Query: 138 LLKNIGFGLDLTKCVVTGVTQDL-LWVSPKSGGAVCRSVGLPYAEKM 183 +GF +C V G D + + GG +C+ ++ + Sbjct: 121 FSDCMGFRPITDRCSVCGDESDQRAIFNIEEGGMLCKKCAENFSGNI 167 >gi|330686117|gb|EGG97738.1| DNA repair protein RecO [Staphylococcus epidermidis VCU121] Length = 252 Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 63/184 (34%), Gaps = 3/184 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + II+ YGE + I+ ++ + R + + V + Sbjct: 1 MLMKQKGIIIKSVEYGESDKIITILNEYGSKVPLMARRAKKIKSGLQAHTQMFVYGLFIY 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +G +V+ H L + + R + E E YD+LN L Sbjct: 61 NKWRGMGTLNCVDVINQHYELQLDLYESSFATLCAETIDRSMEENEISKYNYDLLNFVLT 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD--LLWVSPKSGGAVCRSVGL 177 + + + L + GF KCV++G T L+ S K GA+ +SV Sbjct: 121 KISSGQSAQLMSIIVLLKCMNKFGFSALFNKCVISGNTDQSKLVGYSFKFDGAISQSVAY 180 Query: 178 PYAE 181 Sbjct: 181 QDPH 184 >gi|313159033|gb|EFR58408.1| DNA repair protein RecO family protein [Alistipes sp. HGB5] Length = 242 Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 48/151 (31%), Gaps = 7/151 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP----ILQAGNLVRVN- 57 ++ ++L YG+ ++++ ++T GR V+ +S + + Q V Sbjct: 4 YKGRGVVLHTLKYGDSSMVVYLLTDAGGRRSYMVQGVRSRNGRGSKLALFQPMFPVEFEG 63 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP-EREPCLELYDMLNI 116 S Q + L L+R + EP L+D + Sbjct: 64 LESPRQQMHRFKEVRGGFVLQSLPFDVRKSTMALFMAEVLYRLVREYDEPNEALFDFVWN 123 Query: 117 FLNCHK-IPSVIGKIFVQIELMLLKNIGFGL 146 + + + + L + +GF Sbjct: 124 CVGALDSMDEGVANFHLWFLANLSRFLGFCP 154 >gi|313676335|ref|YP_004054331.1| DNA repair protein reco [Marivirga tractuosa DSM 4126] gi|312943033|gb|ADR22223.1| DNA repair protein RecO [Marivirga tractuosa DSM 4126] Length = 229 Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 48/152 (31%), Gaps = 6/152 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVR----V 56 M + I+LG YGE ++I++V T ++G + + + + + V Sbjct: 1 MLHKTKGIVLGHVKYGESSLIIQVYTEKFGIQSYIENGVRKAKAKHKMAIFQPLTLLDLV 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP-EREPCLELYDMLN 115 ++ + +V + G+ L L E E ++ ++ Sbjct: 61 VYKKANSSINRMSEIKVNPPYRTIPYEIIKSSIGIFLAEFLNHILRGEEEDNPVMFGFIH 120 Query: 116 IFLNCHKIP-SVIGKIFVQIELMLLKNIGFGL 146 L +Q L +GF Sbjct: 121 DSLTYFDQKGEDYINFHLQFLAQLTTYLGFKP 152 >gi|254373185|ref|ZP_04988674.1| hypothetical protein FTCG_00767 [Francisella tularensis subsp. novicida GA99-3549] gi|151570912|gb|EDN36566.1| hypothetical protein FTCG_00767 [Francisella novicida GA99-3549] Length = 232 Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 31/230 (13%), Positives = 71/230 (30%), Gaps = 8/230 (3%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLG 67 IL R Y E ++++ V TR++G+ + + + + Q +R + Sbjct: 8 YILHQRKYRENSLLVSVFTREFGKLSALI--AINKKTTNLYQPLVKLRGQINLAKKADSL 65 Query: 68 EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI 127 + + + L ++ L L+D + L + Sbjct: 66 SKIYNIEFVESFYQKTYINLLSLQYINELIYLLLNYSHEEDVLFDKYDFILRNIDEANYR 125 Query: 128 GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLP 187 + EL LL ++G G+ + + + Q+ G Sbjct: 126 -HLLRMFELELLNSLGQGIYVDSDIDGMLIQNDCNYIILPNGFRKDFS-FAVNSISGSSL 183 Query: 188 SFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 + + + + LK+ ++T ++ Y L R+ + L Sbjct: 184 KKINQPLSSWSNNDLKAISRVTRVCVD-YVLA---GKQLKSRKLLVDYLN 229 >gi|329735352|gb|EGG71644.1| DNA repair protein RecO [Staphylococcus epidermidis VCU045] Length = 253 Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 59/178 (33%), Gaps = 3/178 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + II+ YGE + I+ ++ + R + + V + Sbjct: 1 MLMKQKGIIIKSVDYGESDKIITILNEYGAKIPLMARRAKKVKSGLQANTQLFVYGLFIY 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +G +V+ H L + R + E E YD+L L+ Sbjct: 61 NKWRGMGTLNSVDVINQHYELQLDLFESSCASLCAETIDRSMEENEVSKYNYDLLQFVLS 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD--LLWVSPKSGGAVCRSV 175 + + V + L + GF C +TG+ L+ S K GA+ S Sbjct: 121 KINEGTPAQLMSVIVLLKNMSKFGFTASFDHCAITGIQDQSKLIAYSFKFDGAISESA 178 >gi|124515729|gb|EAY57238.1| Recombination protein O (RecO) [Leptospirillum rubarum] Length = 246 Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 60/175 (34%), Gaps = 6/175 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLAQ 64 A++L Y E + ++ +R+ G GF R S+R L+ L + R L Sbjct: 5 ALVLRSVRYLESDRVVTFFSREEGVLTGFARGATGMSNRFGASLEPLTLSTILGRFHLEG 64 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQS-IVPLFRFLPEREPCLELYDMLNIFLNCH-K 122 L + + + + S Y I L LP P ++D+ +L Sbjct: 65 TLYRIHKASIVNPFSYVKSDLDRCYWAGMGIRLLLGLLPPALPEPPVFDLAVNYLELLSA 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVCRSV 175 +++ L +G+ + C + + L+ P G +C Sbjct: 125 QKISPAFAWIRFAASALDLLGYQIRADDCSLCKESPFGNSLFYYPMDGRVLCSRC 179 >gi|153005322|ref|YP_001379647.1| DNA repair protein RecO [Anaeromyxobacter sp. Fw109-5] gi|171769309|sp|A7HD67|RECO_ANADF RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|152028895|gb|ABS26663.1| DNA repair protein RecO [Anaeromyxobacter sp. Fw109-5] Length = 256 Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 54/153 (35%), Gaps = 3/153 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGF--VRNGQSHRMQPILQAGNLVRVNWRSR-L 62 ++L YGE + ++ ++TR+ G+ GF R L+ L+ R R Sbjct: 8 TGLVLRAVDYGESDRVVTLLTRERGKVSGFARGARASRRRFGGALEPFTLLVAEARERPG 67 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + LG VL +H + + + + EP EL +L +L Sbjct: 68 SDMLGLESVSVLRAHGGIRGELARIACAGYAAELSRELVRDHEPHAELLALLLEYLGALD 127 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + EL L+ G + CV G Sbjct: 128 AGPARPEGLRAFELGALRAAGLMPRVDACVACG 160 >gi|167753894|ref|ZP_02426021.1| hypothetical protein ALIPUT_02179 [Alistipes putredinis DSM 17216] gi|167658519|gb|EDS02649.1| hypothetical protein ALIPUT_02179 [Alistipes putredinis DSM 17216] Length = 245 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 55/150 (36%), Gaps = 6/150 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP----ILQAGNLVRVNW 58 ++ I+L YG+ +++ ++T GR V+ +S R + + Q + Sbjct: 8 YKARGIVLNSLKYGDSAMVVHLLTDALGRQSYMVQGVRSSRGRGSKLALFQPMFALEFEG 67 Query: 59 RSRLAQNLGEFRFEVLESHCAKL-LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + Q + FR ++ L L+R + E EP +L+D + Sbjct: 68 LTSSRQQMHRFREVQSGIVLQRMPFDVRRSTIALFMAEVLYRLVKESEPDSQLFDFVWES 127 Query: 118 LNCHK-IPSVIGKIFVQIELMLLKNIGFGL 146 + + + + + L + +GF Sbjct: 128 IGALDSMEEGVANFHLWFLVNLSRFLGFYP 157 >gi|254496977|ref|ZP_05109813.1| DNA repair protein recO [Legionella drancourtii LLAP12] gi|254353801|gb|EET12500.1| DNA repair protein recO [Legionella drancourtii LLAP12] Length = 204 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 59/213 (27%), Gaps = 14/213 (6%) Query: 22 LEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKL 81 + TR++G + G++ + Q +LQA + R + F + Sbjct: 1 MSFFTREFGLIHCLCKGGRTPKKQALLQAFTPSWLTVDERYER---FFVKTIESISPTLQ 57 Query: 82 LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH---KIPSVIGKIFVQIELML 138 L L L+ L P L+D LN K + + + E L Sbjct: 58 LVGHSLFSALYVNEILYHALSPHYPDTALFDAYLFTLNALVLTKDRLALESLLRRFEWTL 117 Query: 139 LKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTID 198 LK G+ T T + + G A + + L +D Sbjct: 118 LKVCGYSFSFTHEARTDDC-----IVAELSYQFIAGEGFIIANRGIPGAHILALAADNLD 172 Query: 199 ADSLKSAFQLTDYFLNKYALQHNIIHCHLLREN 231 + + + + K R Sbjct: 173 EIDCLKSAK---HIMRKAIEHLLGGREIKARAL 202 >gi|303327128|ref|ZP_07357570.1| DNA repair protein RecO [Desulfovibrio sp. 3_1_syn3] gi|302863116|gb|EFL86048.1| DNA repair protein RecO [Desulfovibrio sp. 3_1_syn3] Length = 251 Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 58/159 (36%), Gaps = 4/159 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M W D A++L + + E ++ L+++ R G F G R + L N ++ Sbjct: 1 MEWADQAVVLRIGHFRESDLWLKLLCRGRGLLTLFAFGGSRSRRRFCGCLDVLNTLQCRV 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 ++ +N VL S L + + + + L E + L L Sbjct: 61 KTSGRENFLNLEEAVLLSGPQCLRGNWQRMGLAANCLRFVEALGVNEEGADETFALVEDL 120 Query: 119 N--CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + P + + + L L +GF +L +C G Sbjct: 121 RRVLEEEPRLPSLLPLFFRLRLAGALGFAPNLGQCGACG 159 >gi|291520562|emb|CBK75783.1| DNA repair protein RecO [Butyrivibrio fibrisolvens 16/4] Length = 241 Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 24/173 (13%), Positives = 53/173 (30%), Gaps = 2/173 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 I+L GE + L ++T++ GR F + + + + + +N Sbjct: 7 TGIVLVSSDVGEFDKRLVILTKESGRVTAFAKGARRPNNPLVAACSPFCFGTFEAFEGRN 66 Query: 66 LGEFRFEVLESHC-AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + ++ ++ G + E +L L + Sbjct: 67 SYHISKANISNYFRDLVMDYEKVCLGSYFLEVADYLSVEGVDEKPRLALLYQSLKALESD 126 Query: 125 SVIGKIFVQIELMLLKNI-GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 ++ I + I G ++ C G ++L S K G +C+ Sbjct: 127 KFSHRLLKNIYDLKTWVIDGEYPNVFTCSCCGKKENLTTFSLKRHGILCKECA 179 >gi|256828794|ref|YP_003157522.1| DNA repair protein RecO [Desulfomicrobium baculatum DSM 4028] gi|256577970|gb|ACU89106.1| DNA repair protein RecO [Desulfomicrobium baculatum DSM 4028] Length = 247 Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 52/158 (32%), Gaps = 3/158 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + + ++L V ++ E + + + +G F G+ R + L V++R Sbjct: 1 MEFSEKVLVLRVGTFREADCWVRFFSPTHGLLTAFAFGGRRSRKRFCGCLDQLSLVHFRV 60 Query: 61 RLAQNLG-EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLP--EREPCLELYDMLNIF 117 + + L + +L L + + V F LP +L Sbjct: 61 SQGRQEYLCLQEGTLINGFGELKRDLKKLGMVSNCVRFFESLPFTPDGYAPAHELLLETL 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + I + + + G+ DL +C G Sbjct: 121 EALDEERPGSWFIPLMFRAKMAFSQGYQPDLQRCRQCG 158 >gi|295105594|emb|CBL03138.1| DNA replication and repair protein RecO [Faecalibacterium prausnitzii SL3/3] Length = 249 Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 65/216 (30%), Gaps = 9/216 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 ++L Y E + IL ++T + G N + + G + +N+ Sbjct: 8 GLVLKETRYREADRILTILTPKLGVITAMAANSLRLKSKLFSACGLFCYSEFTLVPGRNM 67 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPE--REPCLELYDMLNIFLNCHKIP 124 R +++ + SS + + L L E EL +LN ++ Sbjct: 68 YTVREADVQNIFHGISSSIEGVSLAMYLTELAAALSPTGEEAARELRLVLNSLYMINEHR 127 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSG-----GAVCRSVGLPY 179 + + I EL + GF + C G + + A C + Sbjct: 128 TDLRVIKAVFELRTMSECGFMPQIVCCRDCGTYDEGDAFYLDAQEGHLLCASCAAKAGKN 187 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNK 215 L D AF+++ L K Sbjct: 188 CNLDKAALFALRHICLVEDKKIF--AFKISVGSLEK 221 >gi|317056493|ref|YP_004104960.1| DNA repair protein RecO [Ruminococcus albus 7] gi|315448762|gb|ADU22326.1| DNA repair protein RecO [Ruminococcus albus 7] Length = 251 Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 66/220 (30%), Gaps = 10/220 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ-SHRMQPILQAGNLVRVNW----RS 60 ++L GE + + V+T + G +VR G+ S + Q+ + + + + Sbjct: 5 KGLVLKETDSGESSKSICVLTAEMGVIYIYVRGGRKSSKTTSATQSFSYSELCFEEKKNA 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + E ++ L ++ L E + C E+ + L Sbjct: 65 KGQVSRYLNSSEPVKLFYNIRLDAAKVALASYFSELLIYSGTEGQNCAEVMRLALNTLYF 124 Query: 121 HKIPSVIGK-IFVQIELMLLKNIGFGLDLTKCVVT-GVTQDLLWVSPKSGGAVCRSVGLP 178 + + E LL +G L C D + + C+ Sbjct: 125 LDEDKMETDLLKCVFEFRLLCELGMRPKLVGCAFCFKYEDDKMHFNYLEDRLECQDCCPN 184 Query: 179 YA---EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNK 215 +L + F+++D +L K Sbjct: 185 PDSVHTIILDKQLLYIVRFIALTEYEKLFYFKISDKYLKK 224 >gi|148652188|ref|YP_001279281.1| DNA repair protein RecO [Psychrobacter sp. PRwf-1] gi|148571272|gb|ABQ93331.1| DNA repair protein RecO [Psychrobacter sp. PRwf-1] Length = 235 Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 23/161 (14%), Positives = 49/161 (30%), Gaps = 14/161 (8%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A L R + EK I ++T+++G G + G + + S Sbjct: 7 QAYSLHQRPFQEKRSIYYLLTKEHGVLHGVAKKG---------IPQFVPLTLFASGKKSL 57 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH---K 122 + + ES + + L + LP + +Y+ + + Sbjct: 58 KTLQQVHIAESVPSLM--GQQQYAALYVNEITLKLLPVEDSVPIIYEQYSQTMRQLQGVL 115 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV 163 + + E +L +GF +DL + + Sbjct: 116 SRDDLKMVLRAYEQVLFNELGFAIDLDQDCDQYPIEAEPLY 156 >gi|254514116|ref|ZP_05126177.1| DNA repair protein RecO [gamma proteobacterium NOR5-3] gi|219676359|gb|EED32724.1| DNA repair protein RecO [gamma proteobacterium NOR5-3] Length = 258 Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 37/248 (14%), Positives = 72/248 (29%), Gaps = 23/248 (9%) Query: 1 MYWQDD-AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR----MQPILQAGNLVR 55 M Q +L R + + + +L+V + +YGR R R + +LQ + Sbjct: 1 MRVQLQPCYLLHRRPFRDNSELLDVFSVEYGRLGLIARGLSRRRRGGPLGALLQPFRPLL 60 Query: 56 VNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 +++ + E L L L R L E L+ Sbjct: 61 LSFSGKGELLTLTGAESGGELAP---LHGEALLSAFYLSELLLRLLQRFEVQPALFTAYG 117 Query: 116 IFLNCH-------KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG--VTQDLLWVSPK 166 + + + E LL+ +G+ +DL+ G + D + Sbjct: 118 AAIADLSDVASTGNARLSLEPALRRFEFRLLEELGYAVDLSTDASCGAVIRADAHYALVP 177 Query: 167 SGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH 226 G + + + E D S +A ++ + L ++ Sbjct: 178 DFGFREVAAAASPSNASFAGTDIMAIAEGHFDGVSGLAAKRMV-----RTLLHPHLGSTP 232 Query: 227 -LLRENFL 233 R F Sbjct: 233 LRSRSMFE 240 >gi|95929740|ref|ZP_01312481.1| DNA repair protein RecO [Desulfuromonas acetoxidans DSM 684] gi|95134036|gb|EAT15694.1| DNA repair protein RecO [Desulfuromonas acetoxidans DSM 684] Length = 251 Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 59/149 (39%), Gaps = 3/149 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGF--VRNGQSHRMQPILQAGNLVRVNWRSRLA 63 +AI+L YGE + I+ ++TR +G F R L + +R+ W++R Sbjct: 7 EAIVLRCTDYGEADRIVTLLTRDHGICGAFARNARSSRRRFGGALHPFSRLRITWQTRRR 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFL-PEREPCLELYDMLNIFLNCHK 122 L + L L+++ + L L PE + E+YD+L FL Sbjct: 67 GGLPQLAEVELLDGAHGLMTNLDGMALAAYGCELIMALWPEEQAIPEVYDLLRSFLPAAA 126 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKC 151 + + +EL LL G L C Sbjct: 127 SSGAGETLRLLMELRLLDAAGLLPHLGHC 155 >gi|160895176|ref|ZP_02075949.1| hypothetical protein CLOL250_02736 [Clostridium sp. L2-50] gi|156863210|gb|EDO56641.1| hypothetical protein CLOL250_02736 [Clostridium sp. L2-50] Length = 247 Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 64/174 (36%), Gaps = 2/174 (1%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 I+L GE + L ++TR+ G+ F + + Q I + V + +N Sbjct: 9 GIVLSSGLQGEYDRRLVILTREQGKITAFAKGVRRPSSQLISKTQLFVMGAFTVYPGRNA 68 Query: 67 GEFRFEVLESHCAKL-LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP- 124 + + +L + + YG + F E + + ++L + LN K Sbjct: 69 YTLINVDAKEYFHELTFDMNKYCYGSYFCEMMSYFTREGDRSADYLNLLFVSLNALKKGL 128 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + I EL ++ G GL C + G + P SGG +C + Sbjct: 129 LPVKLIRCVYELKIMDIFGQGLQSFHCPICGSDRLTRIFDPLSGGILCENCRSK 182 >gi|239637622|ref|ZP_04678594.1| DNA repair protein RecO [Staphylococcus warneri L37603] gi|239596840|gb|EEQ79365.1| DNA repair protein RecO [Staphylococcus warneri L37603] Length = 252 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 69/206 (33%), Gaps = 10/206 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + II+ YGE + I+ ++ + R + + V + Sbjct: 1 MLMKQKGIIIKSVEYGESDKIITILNEYGSKVPLMARRAKKIKSGLQAHTQMFVYGLFIY 60 Query: 61 RLAQNLGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +G +V+ H L + + R + E E YD+LN L Sbjct: 61 NKWRGMGTLNSVDVINQHYELQLDLYESSFATLCAETIDRSMEEDEISKYNYDLLNFVLT 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD--LLWVSPKSGGAVCRSVGL 177 + + + L + GF +CV++G + L+ S K GA+ ++V Sbjct: 121 KISSGQSAQLMSIIVLLKCMNKFGFSALFNQCVISGNSDQSKLVGYSFKFDGAISQAVA- 179 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLK 203 P L +T+ + Sbjct: 180 ------YQDPHALQLSNKTLYLLDVL 199 >gi|70726351|ref|YP_253265.1| hypothetical protein SH1350 [Staphylococcus haemolyticus JCSC1435] gi|82581563|sp|Q4L6R6|RECO_STAHJ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|68447075|dbj|BAE04659.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 250 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 22/182 (12%), Positives = 48/182 (26%), Gaps = 1/182 (0%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + II+ YGE + I+ ++ + VR + + V + Sbjct: 1 MLEKQKGIIIKSVDYGESDKIITILNEHGAKIPLMVRRAKKSKTGLQAHTQLFVYGLFIY 60 Query: 61 RL-AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 +V+ + L Y + R + + Y +L+ L Sbjct: 61 NKWKGMGTLSSVDVINQYYDLRLDIFNSSYATLCTEAIERSMDNDDISPFHYKLLHFVLE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + + L + GF ++ V+ Y Sbjct: 121 KISNGDSAQLMSIIVLLKCMNRFGFTAFFNHSAISNSYDQSKLVAYSFVYDGTILESELY 180 Query: 180 AE 181 + Sbjct: 181 KD 182 >gi|299769160|ref|YP_003731186.1| DNA repair protein RecO [Acinetobacter sp. DR1] gi|298699248|gb|ADI89813.1| DNA repair protein RecO [Acinetobacter sp. DR1] Length = 237 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 72/238 (30%), Gaps = 21/238 (8%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R Q +R+ + Sbjct: 8 HGYMIHHRKYREKSHIVHLFTQEYGRVDGILR-------QTPPPQYQPIRLQATGKSELK 60 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 ++ + F G + R P E + ++ + L + S Sbjct: 61 N---FTKLEILNQPVFFFGDAFFAGFYLNEVVLRLCPLEETMPQTFEQYQLTLLQLQQLS 117 Query: 126 VIG-------KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 +I Q E +LL +G+ LD + Q + + V Sbjct: 118 SHENPDLFLRQILRQFEHILLPELGYALDFSVDAQQQPIQAHQFYQFQVTEGFAPVVQAS 177 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 + + EQ D QL L + + + R+ ++ Sbjct: 178 RSSLSGKAILSMLDYEQGQDFS--LEQLQLLGK-LYRQMITSLLGDRPLKSRQLWIQN 232 >gi|323342096|ref|ZP_08082329.1| hypothetical protein HMPREF0357_10509 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464521|gb|EFY09714.1| hypothetical protein HMPREF0357_10509 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 232 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 27/205 (13%), Positives = 67/205 (32%), Gaps = 6/205 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M +D I+ + + E + ++ + +YG + + + +V +R Sbjct: 1 MNNKDVGFIVSIVPFREHDAMVHFLGYEYGLIRMILPGYYRAKSKQGRLGLEFSKVQYRF 60 Query: 61 RLAQNLGEFRFEVLESHCAK-LLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 ++ + + + +L + + L + + Y + Sbjct: 61 NFQEHKLNRIIGGESINAYLQVRQNLDWLMYMSLVSELTVRCFDFDSHHLFYQWFENCIE 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + ++ +++ GF D+ CV+ G T ++ S + GG VC + Sbjct: 121 SNN----LEVHCIKYLAFIIQTQGFTPDVEGCVMCGST-NVNAFSIEHGGYVCATHAQHT 175 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKS 204 + L L D D+ Sbjct: 176 IKTTKSLMIALLGIFSNRDVDAYLE 200 >gi|313903266|ref|ZP_07836658.1| DNA repair protein RecO [Thermaerobacter subterraneus DSM 13965] gi|313466354|gb|EFR61876.1| DNA repair protein RecO [Thermaerobacter subterraneus DSM 13965] Length = 288 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 48/155 (30%), Gaps = 5/155 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RSRLAQ 64 + I+L R YGE++ ++ ++ R R + + R + + Sbjct: 7 EGIVLRTREYGERDRLVTLVDRDGTRRTVLAKGVRRPRSSLAAGVQPYTYSRFLLWKGRS 66 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 G + +VL++H S F E P ++ +L L Sbjct: 67 LDGVSQVQVLDAHAGLRGSLEALAAAAYVAELAEAFTHEGAPSPGVFPVLLAVLRGLAAA 126 Query: 125 SVIGKIFVQI----ELMLLKNIGFGLDLTKCVVTG 155 EL LL G G+ L C G Sbjct: 127 PADRVAQGLWLRHAELRLLDLAGLGIQLEACQDCG 161 >gi|262373075|ref|ZP_06066354.1| DNA repair protein RecO [Acinetobacter junii SH205] gi|262313100|gb|EEY94185.1| DNA repair protein RecO [Acinetobacter junii SH205] Length = 235 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 51/168 (30%), Gaps = 17/168 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R + ++ Sbjct: 8 HGYLIHHRKYREKSHIVHLFTQEYGRVDGILRQ----------TPPPQYQPIRLQASGKS 57 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + ++ + F G L R P E + + L + + Sbjct: 58 ELKNFTKLEILNQPVFFHGDAFFAGFYLNEILLRLCPLEEAMSHTFQQYQVILLQLQQLA 117 Query: 126 VIGKIFVQ-------IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 + V E +LL+ +G+ +D + + Sbjct: 118 SHPQASVFLKQILRQFEHVLLQELGYAIDFSIDANQQEILAFQHYQFQ 165 >gi|257791389|ref|YP_003181995.1| DNA repair protein RecO [Eggerthella lenta DSM 2243] gi|257475286|gb|ACV55606.1| DNA repair protein RecO [Eggerthella lenta DSM 2243] Length = 256 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 44/157 (28%), Gaps = 5/157 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN-WRSR 61 + AI+L GE ++IL ++ + + + + V+ +R Sbjct: 6 YDARAIVLRKTKLGESDLILALLAEDGSQIRAVAKGARKPASSFAARLELYSVVDLLVAR 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 ++ES+ L R L+ + L+ Sbjct: 66 GRSLDIVKEARLVESNERLRRDIEHAAGAAPIAELLDRVTQMGLENPRLFALTRTALSSL 125 Query: 122 KIPSVIGKIFVQIELMLLKNIGFG---LDLTKCVVTG 155 ++ LLK + F L CV G Sbjct: 126 -GRVDPAQVPAVCAAHLLKTLAFAGLRPSLDVCVSCG 161 >gi|220904187|ref|YP_002479499.1| DNA repair protein RecO [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868486|gb|ACL48821.1| DNA repair protein RecO [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 250 Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 52/158 (32%), Gaps = 4/158 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 W D A++L + + E ++ L+ + R++G F G R + L ++ R + Sbjct: 3 EWADHALVLRMGHFRESDLWLKTLCRKHGLLTLFAFGGSRSRRRFCGCLDVLNSLHCRVK 62 Query: 62 LAQNLGEFRFEV---LESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + G E L A + + + E + ++ Sbjct: 63 TSPRGGFLNLEEAVLLGGPQALRQDWRRMGLAANCLRFVEALGVNDDGADEAFALVEDMR 122 Query: 119 NCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTG 155 + + +F L L +GF L C + G Sbjct: 123 RTLEEAPALPALFPLFFRLRLAGALGFAPSLDVCGLCG 160 >gi|56708286|ref|YP_170182.1| DNA repair protein recO [Francisella tularensis subsp. tularensis SCHU S4] gi|110670757|ref|YP_667314.1| DNA repair protein recO [Francisella tularensis subsp. tularensis FSC198] gi|224457407|ref|ZP_03665880.1| DNA repair protein recO [Francisella tularensis subsp. tularensis MA00-2987] gi|254370770|ref|ZP_04986775.1| DNA repair protein recO [Francisella tularensis subsp. tularensis FSC033] gi|254875107|ref|ZP_05247817.1| DNA repair protein recO [Francisella tularensis subsp. tularensis MA00-2987] gi|54113119|gb|AAV29193.1| NT02FT1265 [synthetic construct] gi|56604778|emb|CAG45857.1| DNA repair protein recO [Francisella tularensis subsp. tularensis SCHU S4] gi|110321090|emb|CAL09240.1| DNA repair protein recO [Francisella tularensis subsp. tularensis FSC198] gi|151569013|gb|EDN34667.1| DNA repair protein recO [Francisella tularensis subsp. tularensis FSC033] gi|254841106|gb|EET19542.1| DNA repair protein recO [Francisella tularensis subsp. tularensis MA00-2987] gi|282159515|gb|ADA78906.1| DNA repair protein recO [Francisella tularensis subsp. tularensis NE061598] Length = 232 Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 77/230 (33%), Gaps = 8/230 (3%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLG 67 IL R Y E ++++ V TR++G+ + + + + Q +R + G Sbjct: 8 YILYQRKYRENSLLVSVFTREFGKLSALI--AINKKTTNLYQPLVKLRGQINL-AKKADG 64 Query: 68 EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI 127 + +E + + + L LQ I L L ++ F+ + + Sbjct: 65 LSKIYNIEFVESFYQKTYINLLSLQYINELIYLLLNYSHEEDVLFDKYDFILRNIDEANY 124 Query: 128 GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLP 187 + EL LL ++G G+ + + + Q+ G Sbjct: 125 RHLLRMFELELLNSLGQGIYVDSDIDGMLIQNDCNYIILPNGFRKDFS-FAVNSISGSSL 183 Query: 188 SFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 + + + D LK+ ++T ++ Y L R+ + L Sbjct: 184 KKINQPLSSWSNDDLKAISRVTRVCVD-YVLA---GKQLKSRKLLVDYLN 229 >gi|332184360|gb|AEE26614.1| DNA recombination and repair protein RecO [Francisella cf. novicida 3523] Length = 232 Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 79/230 (34%), Gaps = 8/230 (3%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLG 67 IL R Y E ++++ + TR++G+ + + + + Q ++ + + G Sbjct: 8 YILHQRKYRENSLLVSIFTREFGKVSALI--TVNKKTTNLYQPLVKLKGQIKL-AKKADG 64 Query: 68 EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI 127 + +E + S + L LQ I L L ++ F+ + + Sbjct: 65 LAKIYNIEFVESFYQKSYINLLSLQYINELIYLLLNYSHEEDILFDKYDFILRNIDEANY 124 Query: 128 GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLP 187 + EL LL ++G G+ + Q+ + G L Sbjct: 125 RYLLRMFELELLNSLGQGIYADSDIDGISIQNDCSYTILPNGFRKDLD-LATNCISGSSL 183 Query: 188 SFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 + + + D LK+ ++T ++ YAL R+ + L Sbjct: 184 KKINQPLSSWSNDDLKAISRVTRVCID-YALA---GKQLKSRKLLIDYLN 229 >gi|160945170|ref|ZP_02092396.1| hypothetical protein FAEPRAM212_02689 [Faecalibacterium prausnitzii M21/2] gi|158442901|gb|EDP19906.1| hypothetical protein FAEPRAM212_02689 [Faecalibacterium prausnitzii M21/2] Length = 249 Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 68/233 (29%), Gaps = 16/233 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 ++L Y E + IL ++T + G N + + G + +N+ Sbjct: 8 GLVLKETRYREADRILTILTPKLGVITAMAANSLRLKSKLFSACGLFCYSEFTLVPGRNM 67 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPE--REPCLELYDMLNIFLNCHKIP 124 R +++ + SS + + L L E EL +LN ++ Sbjct: 68 YTVREADVQNIFHGISSSIEGVSLAMYLTELAAALSPTGEEAARELRLVLNSLYMINEHR 127 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSG-----GAVCRSVGLPY 179 + + I EL + GF + C G + + A C + Sbjct: 128 TDLRVIKAVFELRTMSECGFMPQIVCCRDCGTYDEGDAFYLDAQEGHLLCASCAAKAGKN 187 Query: 180 AEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFL-------NKYALQHNIIHC 225 L D AF+++ L YAL H Sbjct: 188 CNLDKAALFALRHICLVEDKKIF--AFKISVGSLAKLSAVAENYALTHLDKPL 238 >gi|284047994|ref|YP_003398333.1| DNA repair protein RecO [Acidaminococcus fermentans DSM 20731] gi|283952215|gb|ADB47018.1| DNA repair protein RecO [Acidaminococcus fermentans DSM 20731] Length = 248 Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 72/246 (29%), Gaps = 17/246 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRS 60 +QD+A+IL V+++ + R++G+ + ++Q +R+ Sbjct: 6 FQDEAVILRVKNWQTADKYAVCFCREHGKISFVAYGAAYPRSQSGRLVQPFAHLRLTLNP 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + YG L E EP E++ +L Sbjct: 66 GRKVASLRGCESLEM---PLAMDWENLAYGAIIGEAAEHLLGEEEPQEEVFQLLLEAFRL 122 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT-GVTQDLLWVSPKSGGAVCRSVG--- 176 + + L LL G L +C + + S GG +C+ Sbjct: 123 LGKRNRRL-VTDSTLLKLLALCGLNPILDQCTSCGESVTEDGYFSLVQGGFLCKKCAMGD 181 Query: 177 ---LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLR-ENF 232 A + L+ + D + L+++ L R F Sbjct: 182 ELPFTVATRDLMDRLLHLDLQAPPDFTVRGRELMAMEKILHQFILYQTDRPL---RSLEF 238 Query: 233 LGKLLE 238 L K+ Sbjct: 239 LAKMEN 244 >gi|330836366|ref|YP_004411007.1| DNA repair protein RecO [Spirochaeta coccoides DSM 17374] gi|329748269|gb|AEC01625.1| DNA repair protein RecO [Spirochaeta coccoides DSM 17374] Length = 267 Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 26/185 (14%), Positives = 49/185 (26%), Gaps = 6/185 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 D I+L R G+ + L ++ G + + Q + + Sbjct: 8 DGIVLRTRRMGDMHRRLSLLCPDLGIIDVIAYGARKGKRAMNAQMFSRSTFFLYHNPVRK 67 Query: 66 LGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + H R L+ +L+ L+ + Sbjct: 68 EYTLKDARMESPHDGVRSRLDSMWAASFWSELCTRTAGGDW--NALFLLLSECLDALEED 125 Query: 125 S-VIGKIFVQIELMLLKNIGFGLDLTKC--VVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 + + +Q LL G DLT+C T D + S + C + Sbjct: 126 PSSVERASIQFVWHLLHLAGIAPDLTRCPVSERVYTHDEILGFSASLLSPCSRENGDVDD 185 Query: 182 KMLVL 186 +L Sbjct: 186 MLLPP 190 >gi|239906719|ref|YP_002953460.1| putative DNA repair protein [Desulfovibrio magneticus RS-1] gi|259563677|sp|C4XS52|RECO_DESMR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|239796585|dbj|BAH75574.1| putative DNA repair protein [Desulfovibrio magneticus RS-1] Length = 249 Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 49/159 (30%), Gaps = 4/159 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + D A+IL V+ + E + + +++ G + F G R + + L V ++ Sbjct: 1 MEYSDQALILAVKRFREIDAWVRLLSPTRGVYTAFAFGGLKSRRRFLGCLDPLNHVQFKV 60 Query: 61 RLAQNLGEFRFEV---LESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 R + G L++ + + + Y ++ Sbjct: 61 RRSGYRGYHCLAEGKLLDAPRQLRSHPQRLGMAVNCLKFFEAAPVAPGSFAQAYGLMRAM 120 Query: 118 LNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTG 155 L+ +F + G +C V G Sbjct: 121 LSTLDAADEPSPLFPLLFRARMTFLHGMLPACGQCAVCG 159 >gi|83319326|ref|YP_424479.1| DNA repair protein RecO [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|123535681|sp|Q2SRY4|RECO_MYCCT RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|83283212|gb|ABC01144.1| DNA repair protein RecO [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 249 Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 67/211 (31%), Gaps = 6/211 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN--- 57 M I+L + + + I+ + + YG+ + + L N Sbjct: 1 MEKTLKGIVLNSFDFRDYDKIITIYSNLYGKISLVCLGVNKTKSKNKYAINYLSYSNFEI 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 ++++ L + + L + + + + + L L + L+ +L + Sbjct: 61 FKAKNKLGLSKLKRSELINSFSHIATDFNLYVYANVLTSLVMNLEDHMKNYNLFKILKLS 120 Query: 118 LNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + I LK IG ++LT C + + + C S Sbjct: 121 IFLINSKPNISFKVCILFMFYFLKIIGNQINLTVCGFCNSKINPIIAISFTNY--CSSCK 178 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQ 207 Y + L++ + L +I D ++ Sbjct: 179 FCYFDDCLIIDNQLKNFINSIVKDDFIASLN 209 >gi|227500711|ref|ZP_03930760.1| DNA repair protein RecO [Anaerococcus tetradius ATCC 35098] gi|227217169|gb|EEI82518.1| DNA repair protein RecO [Anaerococcus tetradius ATCC 35098] Length = 255 Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats. Identities = 27/212 (12%), Positives = 63/212 (29%), Gaps = 5/212 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SRLAQ 64 IL Y E + I+EV T + G+ R + G ++VN + + Sbjct: 10 TGFILREFPYHETSKIVEVFTDKLGKVSILARGVYRKNSDKLSLTGRFMKVNLSLYKSGK 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI- 123 + R + + K + + +I + ++ +L+ + Sbjct: 70 DFYGIREGEVLENYKKSQKNFDVILYKSAICDFLLKTMDETQIDTVFKLLDTSFRAFEEA 129 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT--QDLLWVSPKSGGAVCRSVGLP-YA 180 IF+ + + G + + C + G + S + +C Sbjct: 130 EKNYINIFLAFMIKYISFSGLKPNFSTCGICGKIIDNGNNFFSIEEASVICEDDKKKALD 189 Query: 181 EKMLVLPSFLWKEEQTIDADSLKSAFQLTDYF 212 L FL+ + + ++ + Sbjct: 190 RIFLSYDEFLYFYKLLYSRSDELANLSPSENY 221 >gi|257065849|ref|YP_003152105.1| DNA repair protein RecO [Anaerococcus prevotii DSM 20548] gi|256797729|gb|ACV28384.1| DNA repair protein RecO [Anaerococcus prevotii DSM 20548] Length = 255 Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 58/190 (30%), Gaps = 4/190 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SRLAQ 64 IL SY E + I+EV T + GR R + G ++VN ++ Sbjct: 10 TGFILREFSYKETSKIIEVFTDKVGRISIMARGVYRKNSGLLSLTGRFMKVNLSLYKMKG 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH-KI 123 + R L K + + ++ + ++ +L+ Sbjct: 70 DFYGIRDGYLVESYKKSAKNFDIILYKSAMCDFLLKTIDTNQKDTVFKLLDTSFRALEDA 129 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLL--WVSPKSGGAVCRSVGLPYAE 181 IF+ + + G + + C + G D + S + +C + Sbjct: 130 DYGYLNIFLGFLIKYISFSGLKPNFSTCGICGRIIDKATGYFSIREASLICEEHKKDAGD 189 Query: 182 KMLVLPSFLW 191 + + L Sbjct: 190 VIYLTRDDLL 199 >gi|295109869|emb|CBL23822.1| DNA replication and repair protein RecO [Ruminococcus obeum A2-162] Length = 250 Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 57/190 (30%), Gaps = 5/190 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 +++ GE + + ++TR+ G+ F + + + A V N+ + Sbjct: 8 QGVVISAMPVGEYDKRIVLLTRERGKISAFAKGARRLNSPFMAAADPFVFGNFTLYEGRT 67 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL--NCHKI 123 + H +L + +Y + L + + L Sbjct: 68 SYNLNQVSVTHHFVELATMQPGVYYGYYFLELADYFGREGTDEKEMMNLLYVTVKALMNH 127 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT---QDLLWVSPKSGGAVCRSVGLPYA 180 I EL + G L +C + + S + G +C S L Sbjct: 128 QLDDRLIRCIYELRTMVEQGLCPQLFQCTGCEKEISDSEDCFFSQEMHGILCISCALGKR 187 Query: 181 EKMLVLPSFL 190 + + PS L Sbjct: 188 DARRISPSAL 197 >gi|169632756|ref|YP_001706492.1| DNA repair protein [Acinetobacter baumannii SDF] gi|169151548|emb|CAP00315.1| DNA repair protein [Acinetobacter baumannii] Length = 236 Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 53/168 (31%), Gaps = 17/168 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R Q +R+ + Sbjct: 7 HGYMIHHRKYREKSHIVHLFTQEYGRVDGILR-------QTPPPQYQPIRLQATGKSELK 59 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY-------DMLNIFL 118 ++ + F G + R P E + + L Sbjct: 60 N---FTKLEILNQPVFFFCDAFFAGFYLNEIVLRLCPLEEAMPQTFEQYQLTLLQLQQLF 116 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 + + +I Q E +LL +G+ +D + + + Sbjct: 117 SHENPDLFLRQILRQFEHILLAELGYAIDFSIDSSQKEILPQQFYQFQ 164 >gi|149918195|ref|ZP_01906687.1| DNA repair protein RecO [Plesiocystis pacifica SIR-1] gi|149820955|gb|EDM80362.1| DNA repair protein RecO [Plesiocystis pacifica SIR-1] Length = 268 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 47/155 (30%), Gaps = 3/155 (1%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSRL 62 A++L R+Y E ++++ ++T G+ F R + + L G Sbjct: 13 TPAVVLRTRAYREADLVVILLTPTLGKVDAFARAARRSHKRFPGGLPVGGRGEAVLGRGR 72 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN-CH 121 RF H F Y R L + +L + Sbjct: 73 GSLTPLDRFSPTTEHSRLGRDLEAFAYVNYLCELSDRLLGGSAADPTSFALLCDAIETAL 132 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + EL LL ++G L C V G Sbjct: 133 DPDARDPGTLRRFELSLLHSLGLLPALASCSVCGD 167 >gi|213859105|ref|ZP_03385076.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 46 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 19/39 (48%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM 44 A +L R + E +++L+ T + GR + +S R Sbjct: 2 RAFVLHSRPWSETSLMLDAFTEESGRVRLVAKGARSKRS 40 >gi|333029411|ref|ZP_08457472.1| DNA repair protein recO [Bacteroides coprosuis DSM 18011] gi|332740008|gb|EGJ70490.1| DNA repair protein recO [Bacteroides coprosuis DSM 18011] Length = 242 Score = 61.8 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 24/225 (10%), Positives = 61/225 (27%), Gaps = 8/225 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVN 57 M + ++L V Y + I+++ T GR V +S + + + Q ++ +N Sbjct: 1 MEEKTLGVVLKVIKYNDTTNIVDLYTECLGRCSVAVNIPKSSKARVKSNLFQPLAILDLN 60 Query: 58 W-RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 RS+ + + + + ++ + E L+ L Sbjct: 61 LSRSKKGGLYRVKDAKPHLAFQSIPYNPYKSAIAFFIAEFIYYAVKEEGESGSLFSYLMN 120 Query: 117 FLNCHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + + L +G ++ L + + Sbjct: 121 SIQWLDESQNSYANFHLVFMMRLSLFLGLYPNIDNYTEGDYFDLLNASFISYKPTLHNNY 180 Query: 176 GLPYAEKMLVLPSFLWKEEQ---TIDADSLKSAFQLTDYFLNKYA 217 P +V + E ++ + F + Sbjct: 181 LEPLGASHIVQLMRMNYETMYLFKLNRHDRNEILDVLSDFYKIHI 225 >gi|326794407|ref|YP_004312227.1| DNA repair protein RecO [Marinomonas mediterranea MMB-1] gi|326545171|gb|ADZ90391.1| DNA repair protein RecO [Marinomonas mediterranea MMB-1] Length = 243 Score = 61.8 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 18/173 (10%), Positives = 47/173 (27%), Gaps = 4/173 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R++ E ++++++T + G +R Q + + R Sbjct: 4 RGYVIHTRTFQENKVLIDILTAEAGLLRTVLR-VSKKEAQVLPGPFLRYELEVSGRGELK 62 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + A + L + +P P L+ + +N Sbjct: 63 T---LKSIEGVGAAFRFEGLYLYSAMYIHEILEKVVPLNLPLENLFALYEWLINGFNDQL 119 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 I + + E L +G +++ + + G Sbjct: 120 PIAPVLRRFEAGLFDEVGMSINMGSTATGQLLSPQQVYQFIPRFGLKPYHGEQ 172 >gi|294661225|ref|YP_003573101.1| hypothetical protein Aasi_1674 [Candidatus Amoebophilus asiaticus 5a2] gi|227336376|gb|ACP20973.1| hypothetical protein Aasi_1674 [Candidatus Amoebophilus asiaticus 5a2] Length = 217 Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 43/138 (31%), Gaps = 5/138 (3%) Query: 14 SYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLV-RVNWRSRLAQNLGEF 69 Y E +II+ + T +G+ V + + + + + Q + V + + Sbjct: 2 KYREASIIVRIFTELFGKQSYVVNSVRMLKARHSIALFQPFMPLDMVVYHKKSVTLQRIV 61 Query: 70 RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI-PSVIG 128 + L L + L E E L++ L + Sbjct: 62 EVKCHTPITNILCDLKKATIATFLTELLNKVLYEEEHNENLFEFLLQAVIKLNSLADRYE 121 Query: 129 KIFVQIELMLLKNIGFGL 146 ++ L L +GFGL Sbjct: 122 LFYLDFMLQLCSYLGFGL 139 >gi|222151465|ref|YP_002560621.1| hypothetical protein MCCL_1218 [Macrococcus caseolyticus JCSC5402] gi|254764642|sp|B9E6V7|RECO_MACCJ RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|222120590|dbj|BAH17925.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 251 Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 59/192 (30%), Gaps = 2/192 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + I++ +YG+ ++I+ + + RN + + S Sbjct: 1 MLKKAVGIVIRRVAYGDNHLIITFLNEAGVKVALMARNARKSTKYGSGLDLFYENLFIFS 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + + SH + Y + + R L E E Y +L + L Sbjct: 61 QFKGMGTLSSVDTINSHYEIREDIYVMTYAQYVVELIDRALEEDETNPYAYQLLKVALTH 120 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVCRSVGLP 178 + I + + + + G+ + G +D + S + V + + Sbjct: 121 MERSDKARLIALLVSIKCMPLYGYVPNFKYSTYDGNMTHKDFIAYSFQFNSVVTQEALIE 180 Query: 179 YAEKMLVLPSFL 190 + + L Sbjct: 181 DPHAIPMTNKSL 192 >gi|330752341|emb|CBL87294.1| DNA repair protein [uncultured Sphingobacteria bacterium] Length = 197 Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 19/150 (12%), Positives = 45/150 (30%), Gaps = 4/150 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRV---- 56 M + AI+L +Y E ++I ++ T++YG + + + + + + Sbjct: 1 MIAKTKAIVLHNTNYSENSVISKMYTKEYGLRTYIIPSIRKGKSAIRPSMILALSLVELD 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + A + L L + + L+D L Sbjct: 61 IYEKANASINRIKELRNSQLLVNIHSDIVKTSIALFLSEILNHCITFDQGDEYLFDFLQR 120 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGL 146 + + + + L K++G Sbjct: 121 EILILENEETNSLYPIFFLVNLSKHLGVQP 150 >gi|257453600|ref|ZP_05618890.1| DNA repair protein RecO [Enhydrobacter aerosaccus SK60] gi|257449058|gb|EEV24011.1| DNA repair protein RecO [Enhydrobacter aerosaccus SK60] Length = 251 Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 57/196 (29%), Gaps = 22/196 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 IL + YGE ++ + + ++G G + P+ + + + Sbjct: 7 TGYILHQKPYGESRSLVYLFSEEWGVVHGI-----GKKNLPLFVP-----IQFFGNGKNS 56 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH---- 121 L F + + L+ G+ L + LP E E++ L Sbjct: 57 LKTFSQSQILQN-HITLTGQSLYAGMYLNEILQKLLPVEESFAEIWQAYQQCLANMATLF 115 Query: 122 -------KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + + E +L + +G+G D K + + + Sbjct: 116 VEPAQSSHDMIFLKWHLRRFENVLFEQLGYGFDFAKDALGDLIAPSQRYQYQLQQGFMPV 175 Query: 175 VGLPYAEKMLVLPSFL 190 + L + + L Sbjct: 176 LPLDKPDMAITGEQLL 191 >gi|225018644|ref|ZP_03707836.1| hypothetical protein CLOSTMETH_02594 [Clostridium methylpentosum DSM 5476] gi|224948552|gb|EEG29761.1| hypothetical protein CLOSTMETH_02594 [Clostridium methylpentosum DSM 5476] Length = 263 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 53/189 (28%), Gaps = 2/189 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + + +IL RSY + L ++TR G +R + G L + Sbjct: 1 MIIKTEGMILSQRSYRDSEKFLTILTRDQGVIEAKLRQFGQIKRSQFNLIGPLGYFRFDL 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY--DMLNIFL 118 + + L L L + L +Y +LN Sbjct: 61 FVLKQRYTVDAAEKIEDFFPLRYDVEKLALAGYFCELTQSLASPREDAWVYLRLLLNTLA 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 K + EL L GF DL C + G + S LP Sbjct: 121 LLEKDRRSPAFLKAVFELRALSLGGFMPDLVCCKHCCQFEGKKLYFLPFAGTLVCSDCLP 180 Query: 179 YAEKMLVLP 187 + + L Sbjct: 181 GSPENNQLH 189 >gi|257468593|ref|ZP_05632687.1| DNA repair protein recO [Fusobacterium ulcerans ATCC 49185] gi|317062850|ref|ZP_07927335.1| DNA repair protein recO [Fusobacterium ulcerans ATCC 49185] gi|313688526|gb|EFS25361.1| DNA repair protein recO [Fusobacterium ulcerans ATCC 49185] Length = 237 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 72/222 (32%), Gaps = 11/222 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 + + I++ + +GE + + + T +G+ V+ + + + L + + Sbjct: 4 FDSNGIVINKKDFGEADRYITIFTETFGKVNVLVKGIRKSKKREQSSTDILALSKFTFYK 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + ++S + + GL L L + EL+ + LN Sbjct: 64 KGENFI-LSNLTTIDSFSEIKENIDVLGIGLYITSILNSILVDNNRKKELFSLTLKSLNF 122 Query: 121 HKIPSVIGKIFVQIELMLLKN-----IGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 K + K ++ L K +GF C + LL + G S Sbjct: 123 LKSSNDEKKNYILTAFYLFKVIKDEGLGFSTGEGYCFSFERSTFLL---EATEGFFKVSP 179 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYA 217 + + E+ +K+ L + +LN + Sbjct: 180 KEKDIIEKFLNDKVKSIIEEDYSIKEIKNVIFLFERYLNFHL 221 >gi|163784120|ref|ZP_02179065.1| Recombinational DNA repair protein [Hydrogenivirga sp. 128-5-R1-1] gi|159880611|gb|EDP74170.1| Recombinational DNA repair protein [Hydrogenivirga sp. 128-5-R1-1] Length = 230 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 +D+AI+L S G ++ + V T+ +G+ +++ GQ + P LQ N ++ + Sbjct: 4 IKDEAIVLRSSSSGTNDLSITVFTKGFGKENIYIKGGQILKNMYLPKLQPFNWIKGVFVK 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + E + L + +F +LY +L L Sbjct: 64 YKEKTFIKEIDENVNLSYPFTKDLDKLDTALWILHIFDKFTIFN--DEKLYSLLKNALYY 121 Query: 121 HKIPSVIGKIFVQ--IELMLLKNIGFGLDLTKCVVTGVT---QDLLWVSPKSGGAVCRSV 175 + + + + G KCV GV ++ S K G++C+ Sbjct: 122 LQFTENKYLQTYKLTFLIKYIALYGILPSFNKCVKCGVKINRKNFQEFSFKKTGSLCKKC 181 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSL-KSAFQL-------TDYFLNKY 216 + L + + + K + +L + Sbjct: 182 SKNKKTDLSYEELVLTAKLLKLKFKDINKQGLIISPVLIKKFQDYLENH 230 >gi|34541600|ref|NP_906079.1| DNA repair protein RecO [Porphyromonas gingivalis W83] gi|81572004|sp|Q7MTF5|RECO_PORGI RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|34397917|gb|AAQ66978.1| DNA repair protein RecO, putative [Porphyromonas gingivalis W83] Length = 245 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 56/155 (36%), Gaps = 7/155 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFV-----RNGQSHRMQPILQAGNLVR 55 M AI+L +Y + I + +R+ GR + R ++ ++ N + Sbjct: 1 MIIVSRAIVLHNTAYNDSYSIAHLFSRESGRVSYLIPRSSKRGKSGGSLRLLISPLNELE 60 Query: 56 VNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDML 114 + + ++L + L S ++ S + L L+ L E LYD + Sbjct: 61 ITAEHKQHRDLHFIKEAKLCSLHGRIQSDPVRNSIALFLAEFLYLILRLPEADTNLYDFV 120 Query: 115 NIFLNCH-KIPSVIGKIFVQIELMLLKNIGFGLDL 148 ++ ++ + + LL +G DL Sbjct: 121 AFSIDKLEEMDGPMANFHLAFLFRLLVPLGLIPDL 155 >gi|206901957|ref|YP_002251034.1| DNA repair protein RecO [Dictyoglomus thermophilum H-6-12] gi|206741060|gb|ACI20118.1| DNA repair protein RecO [Dictyoglomus thermophilum H-6-12] Length = 236 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 17/225 (7%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRL 62 ++ IIL + GE +++L + ++ G+ + + + + ++ R ++ R Sbjct: 10 EEGIILFKKKIGEGDLLLTIYGKEKGKFFAIAKGALKIKNRLRGKVSIFSVGRGHFVKRR 69 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 +L + L F+ I +F+P L +Y FL Sbjct: 70 EVDLLISWESYEK-FLEILEDVDKFILISDYIRRADKFIPLEVKDLVIYSYFYDFLK--S 126 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLT----KCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + + LL+ +G+ L KCV D ++ + + C Sbjct: 127 WRLIDRYLGDVFLIKLLQRLGYMGKLELKCKKCVKDLSKNDYMYFNLRDNVVYCEECKDI 186 Query: 179 YAEKMLVLPSFLWKEEQTIDADSL--------KSAFQLTDYFLNK 215 + K+ + + E D + L + + Sbjct: 187 GSVKVDLREVMEFNEILDKTFDEIVREKYINSLDNLNLIGRMIER 231 >gi|78357078|ref|YP_388527.1| DNA repair protein RecO [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123552271|sp|Q30ZR4|RECO_DESDG RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|78219483|gb|ABB38832.1| DNA replication and repair protein RecO [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 248 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 54/159 (33%), Gaps = 4/159 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M + + A++L + E ++ + ++ G F G R + L A N V V Sbjct: 1 MDFTEKALVLRTGRFREADLWVRFLSPSRGVITAFAFGGCRSRRRFCGCLDALNHVLVKV 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSS-LFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 S + L + +L S I + E + YD+ Sbjct: 61 SSDKRRTYLCLDEGTLLNGPVRLRSDWGRTGVAANCIKFVEAMGVGPEGAADAYDLTCGM 120 Query: 118 LNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTG 155 L + V+ +IF L + G+ +D +C G Sbjct: 121 LELLETADVVPEIFPVLFRGRLAFDQGYRIDPVRCARCG 159 >gi|154484524|ref|ZP_02026972.1| hypothetical protein EUBVEN_02238 [Eubacterium ventriosum ATCC 27560] gi|149734372|gb|EDM50289.1| hypothetical protein EUBVEN_02238 [Eubacterium ventriosum ATCC 27560] Length = 231 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 54/175 (30%), Gaps = 2/175 (1%) Query: 15 YGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEVL 74 E + L ++T+++G+ F R + Q + + + + +N + Sbjct: 3 ISEYDKRLVLLTKEFGKITAFARGARKTTSQFLAGSQPMAFGEFTLYRGRNAYTVTSMKI 62 Query: 75 ESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM--LNIFLNCHKIPSVIGKIFV 132 + + + +Y + L + K I Sbjct: 63 SDYFSSDMKDIDSMYMGMYFLELADYYGREGIEAGETLKLLYMSMKALSKNMLKKELIRC 122 Query: 133 QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLP 187 EL +L G ++ C G ++L + K+ +C + EK ++ Sbjct: 123 IFELRILVINGEYPNVFTCGNCGEKENLDYFDEKNSTMICSNCHGKVPEKNIIDN 177 >gi|188995818|ref|YP_001930070.1| probable DNA repair protein RecO [Porphyromonas gingivalis ATCC 33277] gi|254764654|sp|B2RM78|RECO_PORG3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|188595498|dbj|BAG34473.1| probable DNA repair protein RecO [Porphyromonas gingivalis ATCC 33277] Length = 245 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 56/155 (36%), Gaps = 7/155 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFV-----RNGQSHRMQPILQAGNLVR 55 M AI+L +Y + I + +R+ GR + R ++ ++ N + Sbjct: 1 MIIVSRAIVLHNTAYNDSYSIAHLFSRESGRVSYLIPRSSKRGKSGGSLRLLISPLNELE 60 Query: 56 VNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDML 114 + + ++L + L S ++ S + L L+ L E LYD + Sbjct: 61 ITAEHKQHRDLHFIKEAKLCSLHGRIQSDPVRNSIALFLAEFLYLILRLPEADTNLYDFV 120 Query: 115 NIFLNCH-KIPSVIGKIFVQIELMLLKNIGFGLDL 148 ++ ++ + + LL +G DL Sbjct: 121 AFSIDKLEEMDGPMANFHLAFLFRLLVPLGLIPDL 155 >gi|323466384|gb|ADX70071.1| DNA repair protein recO [Lactobacillus helveticus H10] Length = 228 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 57/171 (33%), Gaps = 2/171 (1%) Query: 20 IILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN--LGEFRFEVLESH 77 ++ ++MT+Q G V+ + Q N + + + ++ ++ Sbjct: 1 MLAKIMTKQDGIITLIVKGALRPKSQLSAATLNFSMGTYVIYTSGHGLSNLRTYKEVKQF 60 Query: 78 CAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELM 137 + Y + E +P + YD+ L I +++ Sbjct: 61 DGLYRDLTKNAYTSFIFDLIDHAFVEYQPLGKYYDLAVFALKKIDAGVDNEMITQIVQMK 120 Query: 138 LLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPS 188 +L G +L CV+ G + + S K GG VC ++ + P Sbjct: 121 MLSAFGVEPELRHCVICGKERGVFDYSIKLGGIVCSDHFAKVNSRLHLTPK 171 >gi|46445974|ref|YP_007339.1| DNA repair protein RecO [Candidatus Protochlamydia amoebophila UWE25] gi|46399615|emb|CAF23064.1| hypothetical protein pc0340 [Candidatus Protochlamydia amoebophila UWE25] Length = 231 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 25/204 (12%), Positives = 62/204 (30%), Gaps = 5/204 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNWRSR 61 + IIL V + + + IL + T++ G + ++ + + V + ++ + Sbjct: 7 TAEGIILKVIPFRDYDQILAIFTKEAGLIKVLCKKSRNKKGGAKSHYTPLTKVELVYKEQ 66 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + +L+ + S I L++ +P L+ + I+L Sbjct: 67 KGEIFNCHEISILDFYRHLRTELSHLNAACDIIQLLYQTQLVGKPAPRLFTLTEIYLKKI 126 Query: 122 KIPSVIGKIFVQIELMLLK---NIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + L LLK + L + C+ + + Sbjct: 127 PQTQFPDILTTSFRLKLLKHEGILAHPLVCSVCLQPLHQEAFFFRGEVFCRLHYPMGASH 186 Query: 179 YAEKMLVLPSFLWKEEQTIDADSL 202 E + + L + + + Sbjct: 187 LRENEINVLYQLLNCKNYQELTEI 210 >gi|300775773|ref|ZP_07085634.1| recombination protein O [Chryseobacterium gleum ATCC 35910] gi|300505800|gb|EFK36937.1| recombination protein O [Chryseobacterium gleum ATCC 35910] Length = 228 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 20/146 (13%), Positives = 48/146 (32%), Gaps = 4/146 (2%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRN--GQSHRMQPILQAGNLVRVNWRSRLAQ 64 +L YGE + +L T + G F++ + ++ + +LQ + + + Sbjct: 6 GFLLSFIKYGENDAVLHCFTEEEGFQSYFLKGIYAKRNKKKALLQPLSQLNFSVNPSRGN 65 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + L + + L L + +Y ++ F++ Sbjct: 66 GIPSVSKFELVKNNDIYTDIKVNTVIFFISDFLSHILKYENKNIPIYSGIDDFVSELTNK 125 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTK 150 + + L +LK G L++ Sbjct: 126 NYQAHL--LFLLAILKIQGVAPLLSE 149 >gi|139439610|ref|ZP_01773023.1| Hypothetical protein COLAER_02050 [Collinsella aerofaciens ATCC 25986] gi|133774951|gb|EBA38771.1| Hypothetical protein COLAER_02050 [Collinsella aerofaciens ATCC 25986] Length = 249 Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 26/188 (13%), Positives = 58/188 (30%), Gaps = 9/188 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGR-HLGFVRNGQSH--RMQPILQAGNLVRVNWR 59 ++ ++L E ++IL ++ + GR + + R+ + V + Sbjct: 7 YRTKVLVLDKTKLKETDLILTML-DERGRQVRAVAKGARKPGGRLAARCELFCTVDMLLA 65 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + ++ + A E + + L Sbjct: 66 HGRSLDVVSQAELMEAPLGAA-PDYETTCAASAIAEVARVCSFEDAEDPFTFAITQRALT 124 Query: 120 CH---KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + + + LL ++G+ D + CV+ G L + SP++GG +C S Sbjct: 125 LVGSGLDSAHMDLLVAAFVFKLLSHVGYRPDFSACVLCGDPM-LSYFSPQAGGLMCGSCA 183 Query: 177 LPYAEKML 184 L Sbjct: 184 SSVPGAEL 191 >gi|93005199|ref|YP_579636.1| recombination protein O, RecO [Psychrobacter cryohalolentis K5] gi|92392877|gb|ABE74152.1| DNA replication and repair protein RecO [Psychrobacter cryohalolentis K5] Length = 254 Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 60/200 (30%), Gaps = 22/200 (11%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVR--------------NGQSHRMQPILQAGN 52 +L R Y EK + + ++Q+G G + + + + + Sbjct: 8 GYLLHQRPYQEKRALYYLFSQQHGVIHGIGKKGAPLFMPLQLFATGKRDLKTFSQINIAS 67 Query: 53 LVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 V+ ++ N ES L L+R LP +P L+ Sbjct: 68 FSSVHTQAVQDDNAANVDIRHQESIT-----GQHQYAALYLNEILWRLLPTEDPMPILWQ 122 Query: 113 MLNIFLNCHKIPSVIGKIF---VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 L+ K P ++ Q E L +GF L L + + + Sbjct: 123 HYQNSLDALKKPLTADELRLCLRQFESYLFNELGFSLTLHQDSLENPIEPEQVYRFLPDM 182 Query: 170 AVCRSVGLPYAEKMLVLPSF 189 + ++ E M+ F Sbjct: 183 GLVPTLHTEDVESMVGHAVF 202 >gi|94984962|ref|YP_604326.1| DNA repair protein RecO [Deinococcus geothermalis DSM 11300] gi|94555243|gb|ABF45157.1| DNA repair protein RecO [Deinococcus geothermalis DSM 11300] Length = 243 Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 48/151 (31%), Gaps = 5/151 (3%) Query: 7 AIILGVR--SYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQ 64 I++ R G +II+ ++T G+ R G + L + V + Sbjct: 10 GIVIRRRVTPAG--DIIVTLLTP-QGKVKAIARGGVRGALSSRLNLFHHVAIQLYQTPQA 66 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 +L + VLE KL + + E E + +++ L Sbjct: 67 DLATVQQTVLEGALPKLAEPERYAFAHLMAELADALFQEGEFSEQAFELFAGALRGISHQ 126 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + + LL GF +C G Sbjct: 127 PDPEWVALVMSYKLLGLAGFVPQTGRCARCG 157 >gi|187734828|ref|YP_001876940.1| Recombination protein O RecO [Akkermansia muciniphila ATCC BAA-835] gi|187424880|gb|ACD04159.1| Recombination protein O RecO [Akkermansia muciniphila ATCC BAA-835] Length = 178 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 43/148 (29%), Gaps = 6/148 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNW 58 M +A +L + GE +I T + G ++ + L R+ W Sbjct: 1 MN--AEATVLKLYPLGENGLIAVWCTEE-GLIRTAAKSARKPGSPFAGCLDIFYQCRMQW 57 Query: 59 -RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 +++ ++L A S + L P E YD+L Sbjct: 58 TQAKKGDLHTLTSADLLSPRLALRKSYLRLSAAGYFARLFLQMLEPDTPIPEFYDLLQRA 117 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFG 145 + + + E L + G Sbjct: 118 YTYLENNDPTLRAVLHFEQELARLHGIA 145 >gi|260551501|ref|ZP_05825685.1| DNA repair protein RecO [Acinetobacter sp. RUH2624] gi|260405495|gb|EEW98988.1| DNA repair protein RecO [Acinetobacter sp. RUH2624] Length = 237 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 74/240 (30%), Gaps = 25/240 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R Q +R+ + Sbjct: 8 HGYMIHHRKYREKSHIVHLFTQEYGRVDGILR-------QTPPPQYQPIRLQATGKSELK 60 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 ++ + F G + R P EP + ++ + L + S Sbjct: 61 N---FTKLEILNQPVFFFGDAFFAGFYLNEIVLRLCPLEEPMPQTFEQYQLTLLQLQQLS 117 Query: 126 VIG-------KIFVQIELMLLKNIGFGLDLTKCVVTGVT--QDLLWVSPKSGGAVCRSVG 176 +I Q E +LL +G+ +D + G A G Sbjct: 118 SHENPDLFLRQILRQFEHILLPELGYAIDFSVDSSQKEILPNQFYQFQVTEGFAPVVQAG 177 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 +L +++ Q + QL L + + + R+ ++ Sbjct: 178 RSSLSGKAILSMLDYEQGQDFSHEQ----LQLLGK-LYRQMITSLLGDRPLKSRQLWIQN 232 >gi|229815235|ref|ZP_04445571.1| hypothetical protein COLINT_02281 [Collinsella intestinalis DSM 13280] gi|229809245|gb|EEP45011.1| hypothetical protein COLINT_02281 [Collinsella intestinalis DSM 13280] Length = 248 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 57/182 (31%), Gaps = 8/182 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGR-HLGFVRNGQS--HRMQPILQAGNLVRVNWR 59 ++ AI+L E ++IL + Q GR + + R+ + V + Sbjct: 7 YRTKAIVLDKTKLKETDLILT-LVDQAGRQVRAVAKGARKPGSRLAARCELCCEVDLLLA 65 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + ++ V ++ S L + E ++ + L Sbjct: 66 HGRSLDIVSQAELVAAPLGSQ-PSYELLMSASAVAEVARHCTYEDAEDPFVFAITRAVLA 124 Query: 120 CHK--IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + I LL +IG+ D + CV + + S +GG +C S Sbjct: 125 QLASLDAPHLDLIVAAYVFKLLSHIGYLPDCSSCVACED-EAPTYFSAHAGGLLCASCAS 183 Query: 178 PY 179 Sbjct: 184 SV 185 >gi|303245473|ref|ZP_07331757.1| DNA repair protein RecO [Desulfovibrio fructosovorans JJ] gi|302493322|gb|EFL53184.1| DNA repair protein RecO [Desulfovibrio fructosovorans JJ] Length = 249 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 22/192 (11%), Positives = 51/192 (26%), Gaps = 6/192 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + + A++L V + E + + + + G + F G R + + L V ++ Sbjct: 1 MEFSEQALVLKVGRFREIDAWVRLFSPVRGGYTAFAFGGMKSRRRFLGCLDPLNHVRFKV 60 Query: 61 RLAQNLGEFRFEV---LESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNI 116 R + G L++ + + + + + + Sbjct: 61 RRSGRGGYHCLTEARLLDAPTNLRHDPPRLGMAINCLKFFEAVHIGPQGAADAYALLRAM 120 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT--QDLLWVSPKSGGAVCRS 174 + + L G +C V G D ++G C Sbjct: 121 LAALENASAPAALFPLFFRARLATLHGTFPVCDRCAVCGRPFGDDEAVCHVEAGRLTCPD 180 Query: 175 VGLPYAEKMLVL 186 + Sbjct: 181 CRRGGDHGVRQH 192 >gi|22299777|ref|NP_683024.1| DNA repair protein RecO [Thermosynechococcus elongatus BP-1] gi|81742410|sp|Q8DGS9|RECO_THEEB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|22295961|dbj|BAC09786.1| tlr2234 [Thermosynechococcus elongatus BP-1] Length = 279 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 21/159 (13%), Positives = 53/159 (33%), Gaps = 5/159 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 ++ I L GE + +L V +R G + + R + + + + + S Sbjct: 5 YRTIGINLKAMPLGESDRLLSVFSRDRGLLKLVAPHSRGSRSRLGGRVDLFVVNDL-FIS 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + E + ++ + + + ++P EL+D L+ Sbjct: 64 PGRNLDRILQAETVATYQGLHHQLTTLTAAQYLGEVVLYQIHPQQPQPELFDWFCATLDQ 123 Query: 121 HKIPSVIGKIFVQI--ELMLLKNIGFGLDLTKCVVTGVT 157 + S + + + +L+ G + +C +G Sbjct: 124 LQGASSRAALAILVRGLCGILRLGGIAPEWYQCHESGCK 162 >gi|169839804|ref|ZP_02872992.1| recombination protein RecO [candidate division TM7 single-cell isolate TM7a] Length = 162 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 47/133 (35%), Gaps = 4/133 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR 61 +AI+L +YGE + I++ T GR R + R + ++ +L +V R Sbjct: 31 TTEAIVLRRTNYGEADRIIQFSTP-LGRRSAMARGVRKSRSKLAGGVELLSLSQVVLRHG 89 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + +++ + +L + L + + + E + +L L Sbjct: 90 RGEISTLVQARMIKFYKN-ILDNYDKLQFAYEAMKMVAYSSEIIDEPGWFSILKETLEAL 148 Query: 122 KIPSVIGKIFVQI 134 +I Sbjct: 149 DNKRLICTNKTWF 161 >gi|326336333|ref|ZP_08202504.1| DNA repair protein [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691507|gb|EGD33475.1| DNA repair protein [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 236 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 29/229 (12%), Positives = 65/229 (28%), Gaps = 9/229 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ----PILQAGNLVRVNW 58 AI+L + E ++I+ T + G ++ + + + + + + Sbjct: 2 IHTKAIVLSHLKFQETSLIVRCYTLE-GVRSYLLKGVLVPKKKAITPAYFEPLSQLELIT 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGL-QSIVPLFRFLPEREPCLELYDMLNIF 117 R L + + KL S + L L E P L L+ Sbjct: 61 TERNDGTLEYIKEVKINYPYKKLHQSVIRSSVLFFLAEIGSSVLKEEHPNLPLFSFWEES 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L + ++ + L +G + + + + G + Sbjct: 121 LQWYDQAESFTNFHLKFLVDLTLYLGVLPNTSAMELPYFDLEAGVFVSVHNGHFLMNEKE 180 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAF-QLTDYFLNKYALQHNIIHC 225 K + S + + + QL +Y+ ++ L I Sbjct: 181 SLLLKFFLTHSMEEISQLKMSREERNDLLEQLLNYY--RWHLPAFKIPH 227 >gi|237743925|ref|ZP_04574406.1| DNA repair protein recO [Fusobacterium sp. 7_1] gi|229432956|gb|EEO43168.1| DNA repair protein recO [Fusobacterium sp. 7_1] Length = 233 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 23/226 (10%), Positives = 66/226 (29%), Gaps = 18/226 (7%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW- 58 M + + I++ R E + + + YG+ ++ + + + L ++ Sbjct: 1 MIFLRGKGIVISKRDIEEADRYITIFMEDYGKVSTVIKGIRKSKKRDKTAVDILSLTDFQ 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + +L F ++ + L + L E ++Y++L L Sbjct: 61 FYKKNDSLIISNFSTIKDYIGIKSDIDKINIAFYIFSILNQILVENGRNRKIYEVLEKTL 120 Query: 119 NCHKIPSVIGKIFVQIELML----------------LKNIGFGLDLTKCVVTGVTQDLLW 162 N + + K ++ I L ++ + + + V + Sbjct: 121 NYLDVSNDERKNYLLILYFLYIIIKEEGISIENDNDMEELQVEVQTQRKVEIDDNVKKIL 180 Query: 163 VSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQL 208 Y + + + + D+ +A ++ Sbjct: 181 QYLFENNLKVVINDEKYKVDYIKKAILVLENYINFNLDTNINAKKI 226 >gi|332297730|ref|YP_004439652.1| DNA repair protein recO [Treponema brennaborense DSM 12168] gi|332180833|gb|AEE16521.1| DNA repair protein recO [Treponema brennaborense DSM 12168] Length = 269 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 47/152 (30%), Gaps = 2/152 (1%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A++L R GE N I+ +++ G + G+ +++ ++ + V + ++ Sbjct: 9 ALVLTSRQAGEDNRIITLLSPVLGVFDAMLYGGRKSKLRALVSPWHSGTVWLYTDESKKS 68 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 + L + L + ++ FL+ + S Sbjct: 69 IKITDFDPNVFRPSLRENLFKNMAASLATELAVKTKAAGEYGSCWTLVCAFLDGLEFSSE 128 Query: 127 IGKIFV--QIELMLLKNIGFGLDLTKCVVTGV 156 + L +G D CV G Sbjct: 129 AEGRTGLLRFLWRYLGLLGVKPDADCCVRCGS 160 >gi|302338651|ref|YP_003803857.1| DNA repair protein RecO [Spirochaeta smaragdinae DSM 11293] gi|301635836|gb|ADK81263.1| DNA repair protein RecO [Spirochaeta smaragdinae DSM 11293] Length = 257 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 45/160 (28%), Gaps = 5/160 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 +Q DAI+L G+ + + ++ G + + ++ Sbjct: 15 FQTDAIVLRTFRVGDIHKGVTFLSSDSGLVDAVAYGAYKGKGKLGGSTDPFTWGHFYCYR 74 Query: 63 AQNLGEFRFEVLESHC---AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 G + +ES+ A S F + L+ +L L Sbjct: 75 DPVRGRTKINDIESYSIFEAIRGDLSRFYIACYWAELILASFGAGGESSLLFPLLLEALT 134 Query: 120 CHKIPSVIGKIFVQIE--LMLLKNIGFGLDLTKCVVTGVT 157 + V I+ L +G ++ +C G Sbjct: 135 RLDTMQSEDRWHVFIQFGWRFLGLLGVRSEVEECASCGHV 174 >gi|159029991|emb|CAO90370.1| recO [Microcystis aeruginosa PCC 7806] Length = 259 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 21/154 (13%), Positives = 49/154 (31%), Gaps = 6/154 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 +Q I L ++GE + +L ++T +YG + ++ + + + + + Sbjct: 5 YQATGINLQGMAFGEADRLLTILTAEYGLIRAIAPGARKYKSSLRGRSELFVVNNLLIVA 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL-- 118 + + +ES+ + + + +P ELY+++ L Sbjct: 65 GKSLDKVVQAET-IESYPKLSQNLAKLTVSQYLCELVLAIALSEQPQRELYELICSHLAR 123 Query: 119 -NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKC 151 I Q L G + C Sbjct: 124 IEVLDENQYILPYLCQAIFHFLIIAGLVPQVHNC 157 >gi|313897343|ref|ZP_07830886.1| DNA repair protein RecO [Clostridium sp. HGF2] gi|312957713|gb|EFR39338.1| DNA repair protein RecO [Clostridium sp. HGF2] Length = 246 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 5/177 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + I++ V+ Y E + +L+V+ R + + P +Q L R+ Sbjct: 1 MQEEVCGILVDVKEYREHDALLKVLCEDGSLLSLSARGVRKVTSKNAPAVQLFTLARLQL 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + ++ R + + K+ + +Y +L L Sbjct: 61 NYQQTASIQSLRRAEIINSYRKIREDLVKQSIASYFCECIYRSGFE---ENVYILLKQSL 117 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + +I + ++ + G + CV TQ + VS + GG +C+S Sbjct: 118 DILQDAKHPLQILCLFQAVMNRMHGIEPFVDGCVRCQSTQHIQAVSRRDGGFICKSC 174 >gi|237736617|ref|ZP_04567098.1| DNA repair protein recO [Fusobacterium mortiferum ATCC 9817] gi|229420479|gb|EEO35526.1| DNA repair protein recO [Fusobacterium mortiferum ATCC 9817] Length = 238 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 19/122 (15%), Positives = 43/122 (35%), Gaps = 3/122 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 D+ I++ R +GE + + V T +G+ + ++ + + + + L + + Sbjct: 5 INDNGIVINKRDFGEADRYVSVFTENFGKLVFLLKGIRKSKKRELSSVDILTLSKFTFYR 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + ++S+ L + L L E LY++ LN Sbjct: 65 KGENYTVSSF-NEVDSYLEIKSDLDNLGIALYILAILNEILVENNRKKSLYNITIKTLNY 123 Query: 121 HK 122 K Sbjct: 124 LK 125 >gi|226356336|ref|YP_002786076.1| DNA repair protein RecO (Recombination protein O) [Deinococcus deserti VCD115] gi|226318326|gb|ACO46322.1| putative DNA repair protein RecO (Recombination protein O) [Deinococcus deserti VCD115] Length = 247 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 46/154 (29%), Gaps = 5/154 (3%) Query: 7 AIILGVR--SYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQ 64 I++ R G +II+ ++T G+ R G + L + V Sbjct: 10 GIVIRRRVTPAG--DIIVTLLTP-QGKLKAVARGGVRGPLASRLNLFHHVATQIYQGPHN 66 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 +L + VLE +L + + E E + +D+ L Sbjct: 67 DLASVKQAVLEGALPRLAEPERYAFAHLMAEFADALFQEGEFSEQAFDLFAGALRGISHQ 126 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 + + + LL G +C G Sbjct: 127 PDPEWVALVMSYKLLGLAGMVPQTARCARCGQPD 160 >gi|88858202|ref|ZP_01132844.1| DNA repair protein recO (Recombination protein O) [Pseudoalteromonas tunicata D2] gi|88819819|gb|EAR29632.1| DNA repair protein recO (Recombination protein O) [Pseudoalteromonas tunicata D2] Length = 210 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 28/216 (12%), Positives = 56/216 (25%), Gaps = 11/216 (5%) Query: 21 ILEVMTRQYGRHLGFVR--NGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHC 78 +L+++ G+ R Q+ + LQ + + + + Sbjct: 1 MLDMLVENLGQIRLLARLKGKQAVKHSAQLQPFQTLLIRFSGQGDLKYLTQFELASNI-A 59 Query: 79 AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELML 138 L+ G R +P EP Y + L + + E L Sbjct: 60 DIQLAGKALYCGFYLNELCNRIIPINEPIDLAYQLYQQHLQALTTSCDVEQTLRSFEYQL 119 Query: 139 LKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTID 198 L+ +G+G+D + C+ + + Sbjct: 120 LELLGYGVDFNYDAQGDPIEAAALYLYVDEQGWCKQ---NTTHSGFRGEQLMAFSQLDFS 176 Query: 199 ADSLKSAFQLTDYFLNKYALQHNIIHC-HLLRENFL 233 +L +Y L+ + RE FL Sbjct: 177 QPQ----TRLLAKQFARYLLKPLLGERELKSRELFL 208 >gi|262278199|ref|ZP_06055984.1| recombinational DNA repair protein [Acinetobacter calcoaceticus RUH2202] gi|262258550|gb|EEY77283.1| recombinational DNA repair protein [Acinetobacter calcoaceticus RUH2202] Length = 237 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 56/168 (33%), Gaps = 17/168 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R Q +R+ + Sbjct: 8 HGYMIHHRKYREKSHIVHLFTQEYGRVDGILR-------QTPPPQYQPIRLQATGKSELK 60 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 ++ + F G + R P E + ++ + L + + Sbjct: 61 N---FTKLEILNQPVFFFGDAFFAGFYLSEIILRLCPLEEAMPQSFEQYQLTLLQLQQLA 117 Query: 126 VIG-------KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 +I Q E +LL +G+ LD + Q + + Sbjct: 118 SNDQPDLFLRQILRQFEHVLLPELGYALDFSIDTQQQPIQSHQFYQFQ 165 >gi|325284038|ref|YP_004256579.1| DNA repair protein recO [Deinococcus proteolyticus MRP] gi|324315847|gb|ADY26962.1| DNA repair protein recO [Deinococcus proteolyticus MRP] Length = 253 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 45/155 (29%), Gaps = 4/155 (2%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 ++L + ++I+ ++T G+ R G + L + V + +R L Sbjct: 22 GVVLRRWKTPKGDLIVSLLTP-QGKLRAIARGGLRGKHAGALNLFHHVGLQVYARPGDEL 80 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCL---ELYDMLNIFLNCHKI 123 + LE +L Y E E + +D+ L Sbjct: 81 AVIQQASLEGALPRLALPERHPYAHLLAELADLLFQEGEADEYGQQAFDLFAGALRGVAH 140 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 + + + LL GF C G Sbjct: 141 HHDPEWVALVMSYKLLALAGFPQRTRMCARCGAAD 175 >gi|239501069|ref|ZP_04660379.1| DNA repair protein RecO [Acinetobacter baumannii AB900] Length = 237 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 55/168 (32%), Gaps = 17/168 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R Q +R+ + Sbjct: 8 HGYMIHHRKYREKSHIVHLFTQEYGRVDGILR-------QTPPPQYQPIRLQATGKSELK 60 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 ++ + F G + R P E + ++ + L + S Sbjct: 61 ---NFTKLEILNQPVFFFGDAFFAGFYLNEIVLRLCPLEEAMPQTFEQYQLTLLQLQQLS 117 Query: 126 VIG-------KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 +I Q E +LL +G+ LD + + + Sbjct: 118 SHENPDLFLRQILRQFEHILLAELGYALDFSIDSSQKEILPQQFYQFQ 165 >gi|313665393|ref|YP_004047264.1| DNA repair protein RecO [Mycoplasma leachii PG50] gi|312949214|gb|ADR23810.1| DNA repair protein RecO [Mycoplasma leachii PG50] Length = 249 Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 28/211 (13%), Positives = 66/211 (31%), Gaps = 6/211 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN--- 57 M I+L + + + I+ + + YG+ + + L N Sbjct: 1 MEKTLKGIVLNSFDFRDYDKIITIYSNLYGKISLICLGVNKIKSKNKYAINYLSYSNFEI 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 ++++ L + + L + + + + L L + L+ +L + Sbjct: 61 FKAKNKLGLSKLKRSELINSFNHIATDFNLYVYANVLTSLVMNLEDHIKNYNLFKILKLS 120 Query: 118 LNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + I LK IG ++LT C + + + C S Sbjct: 121 IFLINNKPNISFKVCILFMFYFLKVIGNQINLTVCGFCNSKINPIIAISFTNY--CSSCK 178 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAFQ 207 Y + L++ + L ++ D ++ Sbjct: 179 FCYFDDCLIIDNQLKNFINSVVKDDFITSLN 209 >gi|72383569|ref|YP_292924.1| putative recombination protein O [Prochlorococcus marinus str. NATL2A] gi|72003419|gb|AAZ59221.1| DNA replication and repair protein RecO [Prochlorococcus marinus str. NATL2A] Length = 266 Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 21/159 (13%), Positives = 53/159 (33%), Gaps = 9/159 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRLAQ 64 + L V GE + +L +++ + G + + + + N + ++ + Sbjct: 8 KGLSLKVGPLGESDRLLTILSEENGISRFAIPGARKPKSRLGATSPFNFLDLHIVGK-KN 66 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + ++L+S+ + + + +P +L ++ I LN Sbjct: 67 LRRVTQIKILKSYGDLGRNIETLSAAQAISELIMVMVGNEDPQKDLLKLVLIHLNRLNDL 126 Query: 125 SVIGKIFVQIE-------LMLLKNIGFGLDLTKCVVTGV 156 ++ + LL G+ L L C +G Sbjct: 127 HKTEFNSLEALAISVQSCVHLLALGGYCLPLQNCCHSGS 165 >gi|166365593|ref|YP_001657866.1| DNA repair protein RecO [Microcystis aeruginosa NIES-843] gi|166087966|dbj|BAG02674.1| DNA repair protein [Microcystis aeruginosa NIES-843] Length = 260 Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 21/154 (13%), Positives = 49/154 (31%), Gaps = 6/154 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRS 60 +Q I L ++GE + +L ++T +YG + ++ + + + + + Sbjct: 6 YQATGINLQGMTFGEADRLLTILTAEYGLIRAIAPGARKYKSSLRGRSELFVVNNLLIVA 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL-- 118 + + +ES+ + + + +P ELY+++ L Sbjct: 66 GKSLDKVVQAET-IESYPKLSQNLAKLTVSQYLCELVLAIALSEQPQRELYELICGHLAR 124 Query: 119 -NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKC 151 I Q L G + C Sbjct: 125 IEVLDENQYILPYLCQAIFHFLIIAGLVPQVHNC 158 >gi|124025163|ref|YP_001014279.1| putative recombination protein O [Prochlorococcus marinus str. NATL1A] gi|123960231|gb|ABM75014.1| possible Recombination protein O (RecO) [Prochlorococcus marinus str. NATL1A] Length = 259 Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 20/160 (12%), Positives = 54/160 (33%), Gaps = 9/160 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRLAQ 64 + L V GE + +L +++ + G + + + + NL+ ++ + Sbjct: 2 KGLSLKVGPLGENDRLLTILSEESGISRLAIPGARKPKSRLGATSPFNLLDLHIVGKKDL 61 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + ++++S+ + + + +P +L ++ + LN Sbjct: 62 KK-VTQIKIIKSYGNLGKNIETLSAAQAISELILIMVGNEDPQKDLLKLVLMHLNRLNEL 120 Query: 125 SVIGKIFVQIE-------LMLLKNIGFGLDLTKCVVTGVT 157 ++ + LL G+ L L C +G Sbjct: 121 HKTEFNSLEALAISVQSSIHLLALGGYCLPLQNCCHSGSK 160 >gi|258544194|ref|ZP_05704428.1| DNA repair protein RecO [Cardiobacterium hominis ATCC 15826] gi|258520570|gb|EEV89429.1| DNA repair protein RecO [Cardiobacterium hominis ATCC 15826] Length = 222 Score = 59.1 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 47/157 (29%), Gaps = 11/157 (7%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSR 61 Q+ A L + Y E N ++++ + +G R Q R L++++ + + Sbjct: 6 QEPAFALHRKPYKENNYLIDIFSLNFGLFRASARIQQKKTHRKTSNYAPFLLLQISGQRK 65 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + L+ L LP +P ++ Sbjct: 66 GELASLWQAEVQYDFTP----RPARLLHAHYLNEILLGLLPPDDPAPTVFHQY-----LL 116 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 + V Q E LL ++G ++ Sbjct: 117 ALQRVDALALRQFEYTLLTHLGLLPEVAHYAEFYRLD 153 >gi|71064911|ref|YP_263638.1| DNA replication and repair protein RecO [Psychrobacter arcticus 273-4] gi|71037896|gb|AAZ18204.1| DNA replication and repair protein RecO [Psychrobacter arcticus 273-4] Length = 254 Score = 59.1 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 57/200 (28%), Gaps = 22/200 (11%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLV------------ 54 +L R Y EK + + ++Q+G G + P+ L Sbjct: 8 GYLLHQRPYQEKRALYYLFSQQHGVIHGI-----GKKGAPLFMPLQLFATGKRDLKTFSQ 62 Query: 55 --RVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYD 112 ++ S E+ + ++ L L+R LP +P L+ Sbjct: 63 INIASFISAHQSAPQNDDAANAETRYQESITGQHQYAALYLNEILWRLLPTEDPMPILWQ 122 Query: 113 MLNIFLNCHKIPSVIGKIF---VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 L K P ++ E L +GF L L + + Sbjct: 123 HYQDSLYKLKKPLSADELRLCLRHFESYLFNELGFSLTLNQDSLENPIDSAQVYRFLPDV 182 Query: 170 AVCRSVGLPYAEKMLVLPSF 189 + V +E ++ F Sbjct: 183 GLMPIVHHEDSESLVRHTVF 202 >gi|160915034|ref|ZP_02077247.1| hypothetical protein EUBDOL_01042 [Eubacterium dolichum DSM 3991] gi|158432833|gb|EDP11122.1| hypothetical protein EUBDOL_01042 [Eubacterium dolichum DSM 3991] Length = 247 Score = 59.1 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 25/177 (14%), Positives = 53/177 (29%), Gaps = 5/177 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M + AI++ R Y E + I++++ R Q + Q R Sbjct: 1 MNSEYCAIVISYREYREHDAIIKLLDENGTISSLIARGVQKINSKNAAGCQQFTYGRYFV 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R + L + + + + +L L Sbjct: 61 NERQSTVLHSLCSAECLRTYRDIREDLYMQSIASYMCEVIEKSDFE---ENAFPLLKTML 117 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + ++ + G + CV G T+ + +S ++GG +C+S Sbjct: 118 EHLSKKEQPFGVLCLFQAIVNRMHGIEPCVEGCVHCGTTKRIASISVQAGGFLCQSC 174 >gi|15805845|ref|NP_294543.1| hypothetical protein DR_0819 [Deinococcus radiodurans R1] gi|56554135|pdb|1U5K|A Chain A, Recombinational Repair Protein Reco gi|56554136|pdb|1U5K|B Chain B, Recombinational Repair Protein Reco gi|61680145|pdb|1W3S|A Chain A, The Crystal Structure Of Reco From Deinococcus Radiodurans. gi|61680146|pdb|1W3S|B Chain B, The Crystal Structure Of Reco From Deinococcus Radiodurans. gi|151568117|pdb|2V1C|C Chain C, Crystal Structure And Mutational Study Of Recor Provide Insight Into Its Role In Dna Repair gi|6458540|gb|AAF10403.1|AE001936_12 hypothetical protein DR_0819 [Deinococcus radiodurans R1] Length = 244 Score = 58.7 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 46/154 (29%), Gaps = 5/154 (3%) Query: 7 AIILGVR--SYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQ 64 I++ R G +II+ ++T G+ R G + L + V V Sbjct: 10 GIVIRRRVTPAG--DIIVTLLTP-QGKLKAIARGGVKGPLSSSLNLFHHVGVQVYQGPHN 66 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 +L + VLE L + + E E + +D+ L Sbjct: 67 DLASVKQAVLEGALPTLAEPERYAFAHLMAEFADALFQEGEFSEQAFDLFAASLRGVAHQ 126 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 + + + LL G +C G Sbjct: 127 PDPEWVALVMSYKLLGLAGVIPQTARCARCGAPD 160 >gi|118497828|ref|YP_898878.1| RecFOR complex, RecO component [Francisella tularensis subsp. novicida U112] gi|194323801|ref|ZP_03057577.1| DNA repair protein RecO [Francisella tularensis subsp. novicida FTE] gi|254764633|sp|A0Q7A9|RECO_FRATN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|118423734|gb|ABK90124.1| RecFOR complex, RecO component [Francisella novicida U112] gi|194322165|gb|EDX19647.1| DNA repair protein RecO [Francisella tularensis subsp. novicida FTE] Length = 232 Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 29/230 (12%), Positives = 69/230 (30%), Gaps = 8/230 (3%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLG 67 IL R Y E ++++ V TR++G+ + + + + Q +R + Sbjct: 8 YILHQRKYRENSLLVSVFTREFGKLSALI--AINKKTTNLYQPLVKLRGQINLAKKADSL 65 Query: 68 EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI 127 + + + L ++ L L+D + L + Sbjct: 66 SKIYNIEFVESFYQKTYINLLSLQYINELIYLLLNYSHEEDVLFDKYDFILRNIDEANYR 125 Query: 128 GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLP 187 + + +L ++G G+ + + Q+ G Sbjct: 126 YLLRLFELELL-NSLGQGIYVDSDIDGMSIQNDCNYIILPNGFRKDFS-FAVNSISGSSL 183 Query: 188 SFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 + + + D LK+ ++T ++ Y L R+ + L Sbjct: 184 KKINQPLSSWSDDDLKAISRVTRVCVD-YVLA---GKQLKSRKLLVDYLN 229 >gi|260556585|ref|ZP_05828803.1| DNA repair protein RecO [Acinetobacter baumannii ATCC 19606] gi|260409844|gb|EEX03144.1| DNA repair protein RecO [Acinetobacter baumannii ATCC 19606] Length = 237 Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 17/168 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R Q +R+ + Sbjct: 8 HGYMIHHRKYREKSHIVHLFTQEYGRVDGILR-------QTPPPQYQPIRLQATGKSELK 60 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 ++ + F G + R P E + ++ + L + S Sbjct: 61 ---NFTKLEILNQPVFFFGDAFFAGFYLNEIVLRLCPLEEAMPQTFEQYQLTLLQLQQLS 117 Query: 126 VIG-------KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 +I Q E +LL +G+ +D + + + Sbjct: 118 SHENPDLFLRQILRQFEHILLAELGYAIDFSIDSSQKEILPQQFYQFQ 165 >gi|167772056|ref|ZP_02444109.1| hypothetical protein ANACOL_03430 [Anaerotruncus colihominis DSM 17241] gi|167665854|gb|EDS09984.1| hypothetical protein ANACOL_03430 [Anaerotruncus colihominis DSM 17241] Length = 230 Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 37/146 (25%), Gaps = 2/146 (1%) Query: 21 ILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEVLE-SHCA 79 +L ++T++ G + R + R + L + + LE Sbjct: 1 MLTLLTKERGVISAYARGAKKPRGTLRVPTELLSYSCFVLFSNKERYSVDRADLEGVFMG 60 Query: 80 KLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV-IGKIFVQIELML 138 P E E +L L I EL L Sbjct: 61 VRGDVCKLSLASYLCELTAETAPRGESAGEYLRLLLNSLYMLDRDKRACAFIKPLYELRL 120 Query: 139 LKNIGFGLDLTKCVVTGVTQDLLWVS 164 L G+ +L C G + L Sbjct: 121 LTMAGYMPNLVACRGCGCFESELIYF 146 >gi|294784881|ref|ZP_06750169.1| DNA repair protein RecO [Fusobacterium sp. 3_1_27] gi|294486595|gb|EFG33957.1| DNA repair protein RecO [Fusobacterium sp. 3_1_27] Length = 233 Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 24/224 (10%), Positives = 66/224 (29%), Gaps = 4/224 (1%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW- 58 M + + II+ + E + + + YG+ ++ + + + L ++ Sbjct: 1 MIFLRGKGIIIAKKDIEEADRYITIFMEDYGKVSTVIKGIRKSKKRDKTAVDTLSLTDFQ 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + +L F ++ + L + L E ++Y++L L Sbjct: 61 FYKKNDSLIISNFSTIKDYIGIKSDIDKINIAFYIFSILNQILVENGRNRKIYEILEKTL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + K ++ I L I + + L Sbjct: 121 DYLNSSNDERKNYLLILYFLYIIIKEEGIFVE--DGTNIEGLQIEVQAKRKVEIDKNVKK 178 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNI 222 + + + ++ D +K A + + ++N + Sbjct: 179 ILKYLFEDNLKVVINDEKYKIDYVKKAILVLENYINFNLDININ 222 >gi|193078013|gb|ABO12934.2| DNA repair protein [Acinetobacter baumannii ATCC 17978] Length = 236 Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 17/168 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R Q +R+ + Sbjct: 7 HGYMIHHRKYREKSHIVHLFTQEYGRVDGILR-------QTPPPQYQPIRLQATGKSELK 59 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 ++ + F G + R P E + ++ + L + S Sbjct: 60 ---NFTKLEILNQPVFFFGDAFFAGFYLNEIVLRLCPLEEAMPQTFEQYQLTLLQLQQLS 116 Query: 126 VIG-------KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 +I Q E +LL +G+ +D + + + Sbjct: 117 SHENPDLFLRQILRQFEHILLAELGYAIDFSIDSSQKEILPQQFYQFQ 164 >gi|15894578|ref|NP_347927.1| DNA repair protein RecO [Clostridium acetobutylicum ATCC 824] gi|15024225|gb|AAK79267.1|AE007641_13 Hypothetical protein CA_C1309 [Clostridium acetobutylicum ATCC 824] Length = 218 Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 29/217 (13%), Positives = 62/217 (28%), Gaps = 9/217 (4%) Query: 30 GRHLGFVRNGQSHRMQPILQAGNLVRVNW-RSRLAQNLGEFRFEVLESHCAKLLSSSLFL 88 G+ R + +R + + N N+ + E+++S L Sbjct: 2 GKISVIARGAKKNRSKYLPITINFCFGNFVFFKGKSMFSLNEGEIIDSFQEFLSDFDTLT 61 Query: 89 YGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS-VIGKIFVQIELMLLKNIGFGLD 147 Y + + E E +L+ K I + EL LL+ G+ L+ Sbjct: 62 YCSYLCELIDISMAEGESNRDLFKEFVSTFYLIKNKVGDIETLSRAFELKLLRYTGYNLN 121 Query: 148 LTKCVVTGVTQDLLWVSPKSGGAV-----CRSVGLPYAEKMLVLPSFLWK-EEQTIDADS 201 L C + + G+ ++L K + + + Sbjct: 122 LDYCSKCKKRINSASYISYKYYGGICGDCSKEGGMSVTPAAYSSLNYLSKLPIEKVYRVN 181 Query: 202 LKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLLE 238 L + + + + + N + L + E Sbjct: 182 LNDNIKNEMFEILRGFISQNYAKIPKS-LDLLNIIKE 217 >gi|169795099|ref|YP_001712892.1| DNA repair protein [Acinetobacter baumannii AYE] gi|169148026|emb|CAM85889.1| DNA repair protein [Acinetobacter baumannii AYE] Length = 236 Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 17/168 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R Q +R+ + Sbjct: 7 HGYMIHHRKYREKSHIVHLFTQEYGRVDGILR-------QTPPPQYQPIRLQATGKSELK 59 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 ++ + F G + R P E + ++ + L + S Sbjct: 60 ---NFTKLEILNQPVFFFGDAFFAGFYLNEIVLRLCPLEEAMPQTFEQYQLTLLQLQQLS 116 Query: 126 VIG-------KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 +I Q E +LL +G+ +D + + + Sbjct: 117 SHENPDLFLRQILRQFEHILLAELGYAIDFSIDSSQKEILPQQFYQFQ 164 >gi|282899614|ref|ZP_06307578.1| Recombination protein O, RecO [Cylindrospermopsis raciborskii CS-505] gi|281195493|gb|EFA70426.1| Recombination protein O, RecO [Cylindrospermopsis raciborskii CS-505] Length = 298 Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 52/160 (32%), Gaps = 13/160 (8%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM----QPILQAGNLVRVNWRSR 61 I L + GE + IL V+TR+ G + ++ + + N + ++ Sbjct: 8 RGINLKSQFLGESDKILTVLTRELGLIKAIAPGSRKYQSSLNGRSGIFTVNELLISLGKS 67 Query: 62 L----AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + + L+++ S E +ELYD+LN Sbjct: 68 NPTQTSNLYKINQAQTLKTYPGLTKSLGKLAASQYLAEIALHQALEEHTQVELYDLLNQH 127 Query: 118 LNCHKIPSVIGKIFVQIE-----LMLLKNIGFGLDLTKCV 152 L+ I +I + +LK G + C Sbjct: 128 LDTLDSLPPIPQIAIVAHLAKGVFDMLKLAGISPQIQVCC 167 >gi|257063886|ref|YP_003143558.1| DNA repair protein RecO [Slackia heliotrinireducens DSM 20476] gi|256791539|gb|ACV22209.1| DNA repair protein RecO [Slackia heliotrinireducens DSM 20476] Length = 257 Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 20/161 (12%), Positives = 43/161 (26%), Gaps = 7/161 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGR-HLGFVRNGQSHRMQPILQAGNLVRVN-WRSRLA 63 A+++ GE ++I+ ++ GR + + + V+ Sbjct: 9 HALVVRKTKLGETDLIVTLL-ADDGRLLRAVAKGARKPTSTFSSRIELFSVVDALLVEGR 67 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 +++++ S + +L+ L Sbjct: 68 NLDILKEARLVDANLGIRESMERAAAASPILELAGIIAQPELVHPKLFSCTVAGLKA-AC 126 Query: 124 PSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLL 161 + + LLK GF +CV G DL Sbjct: 127 DADPAQTLSLSAACLLKVFSFAGFRPSFNECVKCGSKIDLS 167 >gi|213158239|ref|YP_002320290.1| DNA repair protein RecO [Acinetobacter baumannii AB0057] gi|215482648|ref|YP_002324842.1| DNA repair protein RecO [Acinetobacter baumannii AB307-0294] gi|301345821|ref|ZP_07226562.1| DNA repair protein RecO [Acinetobacter baumannii AB056] gi|301594767|ref|ZP_07239775.1| DNA repair protein RecO [Acinetobacter baumannii AB059] gi|332851052|ref|ZP_08433161.1| DNA repair protein RecO [Acinetobacter baumannii 6013150] gi|332869699|ref|ZP_08438887.1| DNA repair protein RecO [Acinetobacter baumannii 6013113] gi|213057399|gb|ACJ42301.1| DNA repair protein RecO [Acinetobacter baumannii AB0057] gi|213988028|gb|ACJ58327.1| DNA repair protein RecO [Acinetobacter baumannii AB307-0294] gi|332730216|gb|EGJ61541.1| DNA repair protein RecO [Acinetobacter baumannii 6013150] gi|332732601|gb|EGJ63834.1| DNA repair protein RecO [Acinetobacter baumannii 6013113] Length = 237 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 17/168 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R Q +R+ + Sbjct: 8 HGYMIHHRKYREKSHIVHLFTQEYGRVDGILR-------QTPPPQYQPIRLQATGKSELK 60 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 ++ + F G + R P E + ++ + L + S Sbjct: 61 ---NFTKLEILNQPVFFFGDAFFAGFYLNEIVLRLCPLEEAMPQTFEQYQLTLLQLQQLS 117 Query: 126 VIG-------KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 +I Q E +LL +G+ +D + + + Sbjct: 118 SHENPDLFLRQILRQFEHILLAELGYAIDFSIDSSQKEILPQQFYQFQ 165 >gi|254374639|ref|ZP_04990120.1| hypothetical protein FTDG_00813 [Francisella novicida GA99-3548] gi|151572358|gb|EDN38012.1| hypothetical protein FTDG_00813 [Francisella novicida GA99-3548] Length = 232 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 77/230 (33%), Gaps = 8/230 (3%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLG 67 IL R Y E ++++ V TR++G+ + + + + Q +R + G Sbjct: 8 YILHQRKYRENSLLVSVFTREFGKLSALI--AINKKTTNLYQPLVKLRGQINL-AKKADG 64 Query: 68 EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI 127 + +E + + + L LQ I L L ++ F+ + + Sbjct: 65 LSKIYNIEFVESFYQKTYINLLSLQYINELIYLLLNYSHEEDILFDKYDFILRNIDEANY 124 Query: 128 GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLP 187 + EL LL ++G G+ + + + Q+ G Sbjct: 125 RHLLRLFELELLNSLGQGIYVDSDIDGMLIQNDCNYIILPNGFRKDFS-FAVNSISGSSL 183 Query: 188 SFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCHLLRENFLGKLL 237 + + + D LK+ ++T ++ Y L R+ + L Sbjct: 184 KKINQPLSSWSDDDLKAISRVTRVCVD-YVLA---GKQLKSRKLLVDYLN 229 >gi|260495178|ref|ZP_05815306.1| DNA repair protein RecO [Fusobacterium sp. 3_1_33] gi|260197235|gb|EEW94754.1| DNA repair protein RecO [Fusobacterium sp. 3_1_33] Length = 233 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 25/227 (11%), Positives = 68/227 (29%), Gaps = 4/227 (1%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW- 58 M + + + I++ + E + + + YG+ ++ + + + L ++ Sbjct: 1 MIFLRGNGIVISKKDIEEADRYITIFMEDYGKVSTVIKGIRKSKKRDKTAVDILSLTDFQ 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + +L F ++ + L + L E ++Y++L L Sbjct: 61 FYKKNDSLIISNFSTIKDYIGIKSDIDKINIAFYIFSILNQILVENGRNRKIYEVLEKTL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 N + + K ++ I L I ++L Sbjct: 121 NYLDVSNDERKNYLLILYFLYIIIKEEGI--SIENNNDMEELQVEVQTQRKVEIDDNVKK 178 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHC 225 E + + ++ D +K A + + ++N + Sbjct: 179 ILEYLFKDNLKVVINDEKYKIDYIKKAILVLENYINFNLDTNINAKK 225 >gi|282898320|ref|ZP_06306311.1| Recombination protein O, RecO [Raphidiopsis brookii D9] gi|281196851|gb|EFA71756.1| Recombination protein O, RecO [Raphidiopsis brookii D9] Length = 298 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 50/167 (29%), Gaps = 15/167 (8%) Query: 1 MY--WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRV 56 M +Q I L GE + IL V+TR+ G + + + + Sbjct: 1 MNGSYQVRGINLKSHFLGESDKILTVLTRELGLIKAIAPGARKYQSNLNGRSGIFMVNEL 60 Query: 57 NWRSRLAQNLG------EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL 110 + + + L++H S E P +EL Sbjct: 61 LISPGKSNPTQTSGLYRINQAQTLKTHAGLSKSLGKLAASQYLAEIALHQALEEHPQIEL 120 Query: 111 YDMLNIFLNCHKIPSVIGKIFVQIE-----LMLLKNIGFGLDLTKCV 152 YD+LN L+ +I +I + +L G + C Sbjct: 121 YDLLNQHLDTLDSLPLIPQIAIVAHLAKGVFDMLNLAGISPQIQLCC 167 >gi|34762478|ref|ZP_00143477.1| DNA repair protein recO [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|237742600|ref|ZP_04573081.1| DNA repair protein recO [Fusobacterium sp. 4_1_13] gi|27887877|gb|EAA24946.1| DNA repair protein recO [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|229430248|gb|EEO40460.1| DNA repair protein recO [Fusobacterium sp. 4_1_13] Length = 233 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 24/224 (10%), Positives = 66/224 (29%), Gaps = 4/224 (1%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW- 58 M + + II+ + E + + + YG+ ++ + + + L ++ Sbjct: 1 MIFLRGKGIIIAKKDIEEADRYITIFMEDYGKVSTVIKGIRKSKKRDKTAVDILSLTDFQ 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + +L F ++ + L + L E ++Y++L L Sbjct: 61 FYKKNDSLIISNFSTIKDYIGIKSDIDKINIAFYIFSILNQILVENGRNRKIYEILEKTL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + K ++ I L I + + L Sbjct: 121 DYLNSSNDERKNYLLILYFLYIIIKEEGIFVE--DGTNIEGLQIEVQAKRKVEIDKNVKK 178 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNI 222 + + + ++ D +K A + + ++N + Sbjct: 179 ILKYLFEDNLKVVINDEKYKIDYVKKAILVLENYINFNLDININ 222 >gi|256845995|ref|ZP_05551453.1| DNA repair protein RecO [Fusobacterium sp. 3_1_36A2] gi|256719554|gb|EEU33109.1| DNA repair protein RecO [Fusobacterium sp. 3_1_36A2] Length = 233 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 24/224 (10%), Positives = 66/224 (29%), Gaps = 4/224 (1%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW- 58 M + + II+ + E + + + YG+ ++ + + + L ++ Sbjct: 1 MIFLRGKGIIIAKKDIEEADRYITIFMEDYGKVSTVIKGIRKSKKRDKTAVDILSLTDFQ 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + +L F ++ + L + L E ++Y++L L Sbjct: 61 FYKKNDSLIISNFSTIKDYIGIKSDIDKINIAFYIFSILNQILVENGRNRKIYEILEKTL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + K ++ I L I + + L Sbjct: 121 DYLNNSNDERKNYLLILYFLYIIIKEEGIFVE--DGTNIEGLQIEVQAKRKVEIDKNVKK 178 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNI 222 + + + ++ D +K A + + ++N + Sbjct: 179 ILKYLFEDNLKVVINDEKYKIDYVKKAILVLENYINFNLDININ 222 >gi|301511104|ref|ZP_07236341.1| DNA repair protein RecO [Acinetobacter baumannii AB058] Length = 237 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 17/168 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R Q +R+ + Sbjct: 8 HGYMIHHRKYREKSHIVHLFTQEYGRVDGILR-------QTPPPQYQPIRLQATGKSELK 60 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 ++ + F G + R P E + ++ + L + S Sbjct: 61 ---NFTKLEILNQPVFFFGDAFFAGFYLNEIVLRLCPLEEAMPQTFEQYQLTLLQLQQLS 117 Query: 126 VIG-------KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 +I Q E +LL +G+ +D + + + Sbjct: 118 SHENPDLFLRQILRQFEHILLAELGYAIDFSIDSSQKEILPQQFYQFQ 165 >gi|184159113|ref|YP_001847452.1| recombinational DNA repair protein (RecF pathway) [Acinetobacter baumannii ACICU] gi|332875942|ref|ZP_08443728.1| DNA repair protein RecO [Acinetobacter baumannii 6014059] gi|183210707|gb|ACC58105.1| Recombinational DNA repair protein (RecF pathway) [Acinetobacter baumannii ACICU] gi|332735808|gb|EGJ66849.1| DNA repair protein RecO [Acinetobacter baumannii 6014059] Length = 237 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 17/168 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R Q +R+ + Sbjct: 8 HGYMIHHRKYREKSHIVHLFTQEYGRVDGILR-------QTPPPQYQPIRLQATGKSELK 60 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 ++ + F G + R P E + ++ + L + S Sbjct: 61 ---NFTKLEILNQPVFFFGDAFFAGFYLNEIVLRLCPLEEAMPQTFEQYQLTLLQLQQLS 117 Query: 126 VIG-------KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 +I Q E +LL +G+ +D + + + Sbjct: 118 SHENPDLFLRQILRQFEHILLAELGYAIDFSIDSSQKEILSQQFYQFQ 165 >gi|256027465|ref|ZP_05441299.1| DNA repair protein recO [Fusobacterium sp. D11] gi|289765427|ref|ZP_06524805.1| DNA repair protein recO [Fusobacterium sp. D11] gi|289716982|gb|EFD80994.1| DNA repair protein recO [Fusobacterium sp. D11] Length = 233 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 25/227 (11%), Positives = 67/227 (29%), Gaps = 4/227 (1%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW- 58 M + + I++ + E + + + YG+ ++ + + + L ++ Sbjct: 1 MIFLRGKGIVISKKDIEEADRYITIFMEDYGKVSTVIKGIRKSKKRDKTAVDILSLTDFQ 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + +L F ++ + L + L E ++Y++L L Sbjct: 61 FYKKNDSLIISNFSTIKDYIGIKSDIDKINIVFYIFSILNQILVENGRNRKIYEVLEKTL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 N + + K ++ I L I ++L Sbjct: 121 NYLDLSNDERKNYLLILYFLYIIIKEEGI--SIENNNDMEELQVEVQTQRKVEIDDNVKK 178 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHC 225 E + + ++ D +K A + + ++N + Sbjct: 179 ILEYLFKDNLKVVINDEKYKIDYIKKAILVLENYINFNLDININAKK 225 >gi|293609823|ref|ZP_06692125.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828275|gb|EFF86638.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 237 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 54/168 (32%), Gaps = 17/168 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R Y EK+ I+ + T++YGR G +R + ++ Sbjct: 8 HGYMIHHRKYREKSHIVHLFTQEYGRVDGILRQ----------TPPPQYQPIRMQATGKS 57 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + ++ + F G + R P E + ++ + L + S Sbjct: 58 ELKNFTKLEILNQPVFFFGDAFFAGFYLNEIVLRLCPLEEAMPQTFEQYQLTLLQLQQLS 117 Query: 126 VIG-------KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 +I Q E +LL +G+ +D Q + + Sbjct: 118 SHENPDLFLRQILRQFEHVLLPELGYAIDFLIDTQQQPIQAHQFYQFQ 165 >gi|256383954|gb|ACU78524.1| DNA repair protein RecO [Mycoplasma mycoides subsp. capri str. GM12] gi|256384786|gb|ACU79355.1| DNA repair protein RecO [Mycoplasma mycoides subsp. capri str. GM12] gi|296455960|gb|ADH22195.1| DNA repair protein RecO [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 249 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 70/210 (33%), Gaps = 6/210 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN--- 57 M I+L + + + I+ + + YG+ + + L N Sbjct: 1 MEKTLKGIVLNSFDFQDYDKIITIYSNLYGKISLVCLGVNKIKSKNKYGINYLSYSNFEI 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 ++S+ NL + + L + + + I L L E+ LY L + Sbjct: 61 FKSKNKFNLSKLKRSELINSFNHISTDFNLYLYANIITSLVLSLDEQIKNYNLYKTLKLS 120 Query: 118 LNCHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 ++ K+ V LK IG +DL+KC + + + C S Sbjct: 121 ISIINNKPDLGLKVCVLFMFYFLKIIGNQIDLSKCGFCNSKINPIIAISFTNY--CSSCK 178 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAF 206 Y + +++ + L +I + + Sbjct: 179 FCYFDDCILIDNQLSNFINSIFKNDFITNL 208 >gi|42560998|ref|NP_975449.1| DNA repair protein recO [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|81618847|sp|Q6MTE5|RECO_MYCMS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|42492495|emb|CAE77091.1| DNA repair protein recO [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301321287|gb|ADK69930.1| DNA repair protein RecO [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 249 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 71/210 (33%), Gaps = 6/210 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN--- 57 M I+L + + + I+ + + YG+ + + L N Sbjct: 1 MEKTLKGIVLNSFDFQDYDKIITIYSNLYGKISLVCLGVNKIKSKNKYGINYLSYSNFEI 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 ++S+ NL + + L + + + I L L E+ LY L + Sbjct: 61 FKSKNKFNLSKLKRSELINSFNHISTDFNLYLYANIITSLVLSLDEQIKNYNLYKTLKLS 120 Query: 118 LNCHKIPSVI-GKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 ++ S K+ V LK IG +DL+KC + + + C S Sbjct: 121 ISIINNKSDFGLKVCVLFMFYFLKIIGNQIDLSKCGFCNSKINPIIAISFTNY--CSSCK 178 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAF 206 Y + +++ + L +I + + Sbjct: 179 FCYFDDCILIDNQLSNFINSIFKNDFITNL 208 >gi|269215642|ref|ZP_06159496.1| DNA repair protein RecO [Slackia exigua ATCC 700122] gi|269131129|gb|EEZ62204.1| DNA repair protein RecO [Slackia exigua ATCC 700122] Length = 259 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 47/162 (29%), Gaps = 7/162 (4%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGR-HLGFVRNGQSHRM--QPILQAGNLVRVNWR 59 + A+++ GE + I+ ++ GR + + L+ ++V V Sbjct: 6 YSARALVVRKVKLGETDRIVHLI-ADDGRLVKAVAKGARKPTSPFSSRLEVFSVVDVLLA 64 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + ++ ++++H L I + + P Y L+ Sbjct: 65 QGRSLDI-VKEARLVDAHAGVRLDLLRAAAAAPLIECIAKAAQPDLPNPRSYACAVAALD 123 Query: 120 CHKI--PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 I L + GF CV G D Sbjct: 124 AMDDAEAGDALAIGAAALLKVYSFTGFRPSFDACVSCGRRLD 165 >gi|332830216|gb|EGK02844.1| DNA repair protein RecO [Dysgonomonas gadei ATCC BAA-286] Length = 240 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 22/163 (13%), Positives = 54/163 (33%), Gaps = 5/163 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGF---VRNGQSHRMQPILQAGNLVRVN 57 M ++ ++L +Y +K ++ +V T +GR R S + + ++ + Sbjct: 1 MLYKTRGLVLNTINYNDKYVLAQVFTESFGRVTYMVSKARGKSSKVPKSLFSPLAILDME 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNI 116 + ++++ R + + + L R L + L+ L Sbjct: 61 VEHQASRDIQRIREARADMYLYDISGDLSKTSMAFFLSEFLTRVLKDTNDSRILFSFLEQ 120 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQ 158 + ++ F L L +GF +L + + Sbjct: 121 SVQILEMTDKSISNFHLVFMLKLSHFLGFYPNLEEYRENSMFD 163 >gi|253582379|ref|ZP_04859602.1| DNA repair protein recO [Fusobacterium varium ATCC 27725] gi|251835918|gb|EES64456.1| DNA repair protein recO [Fusobacterium varium ATCC 27725] Length = 134 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 46/132 (34%), Gaps = 3/132 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 + + I++ + +GE + + + T +G+ V+ + + + L + + Sbjct: 4 FDSNGIVINKKDFGEADRYITIFTETFGKVNVIVKGIRKSKRREQSSTDILALSKFTFYK 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + ++S + + GL L L + EL+ + LN Sbjct: 64 KGENFILSNLIT-IDSFSEIKENIDVLGIGLYITSVLNSILVDNNRKKELFSLTLKTLNF 122 Query: 121 HKIPSVIGKIFV 132 K + KI Sbjct: 123 LKKSNDEKKIIY 134 >gi|320335056|ref|YP_004171767.1| DNA repair protein recO [Deinococcus maricopensis DSM 21211] gi|319756345|gb|ADV68102.1| DNA repair protein recO [Deinococcus maricopensis DSM 21211] Length = 244 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 45/154 (29%), Gaps = 5/154 (3%) Query: 7 AIILGV--RSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQ 64 I++ G ++IL ++T G+ G R G + L + V Sbjct: 10 GIVIRRAVMPAG--DVILTLLTP-QGKVKGIARGGARGALMSRLNLFQHLAVQLYQTPNN 66 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 +L + LE +L + E E + +++ L Sbjct: 67 DLATIQQATLEGALPRLSEPERYPLAHLLAELADALFQEGEHSEQAFELFAAALRGVAFQ 126 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 + + + LL GF +C G Sbjct: 127 PDPEWVALVMSYKLLAFAGFVTRAERCARCGAAD 160 >gi|237739503|ref|ZP_04569984.1| DNA repair protein recO [Fusobacterium sp. 2_1_31] gi|229423111|gb|EEO38158.1| DNA repair protein recO [Fusobacterium sp. 2_1_31] Length = 231 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 27/227 (11%), Positives = 73/227 (32%), Gaps = 6/227 (2%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW- 58 M + + II+ + E + +++ YG+ ++ + + + L ++ Sbjct: 1 MIFLRGKGIIISKKDVEEADRYIDIFMEDYGKVSTLIKGIRKSKKRDKTAVDILSLTDFQ 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + +L F ++ + A L + L E +LY++L L Sbjct: 61 FYKKNDSLIISNFSTVKDYLAIKSDIDKINMAFYIFSILNQILVENGRNRKLYEVLEKTL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + K ++ + L + + G +L + P+ Sbjct: 121 DYLNNSDNTRKNYLLLLYFL----YIVIKEEGISIEGDIDELQFEIPEQKKIDLDKTSRK 176 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHC 225 E + + ++ + +S+K A + + ++N + Sbjct: 177 ILEYLFEEKLKIVINDENFELNSVKKAILVLENYINFNLDTNINAKK 223 >gi|19704824|ref|NP_604386.1| DNA repair protein recO [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19715170|gb|AAL95686.1| DNA repair protein recO [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 233 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 24/227 (10%), Positives = 71/227 (31%), Gaps = 10/227 (4%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW- 58 M + + II+ + E + + + YG+ ++ + + + L ++ Sbjct: 1 MIFLRGKGIIIAKKDIEEADRYITIFMEDYGKVSTVIKGIRKSKKRDKTAVDILSLTDFQ 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + +L F ++ + L + L E ++Y++L L Sbjct: 61 FYKKNDSLIISNFSTVKDYIGIKSDIDKINIAFYIFSILNQILVENGRNRKIYEVLEKTL 120 Query: 119 NCHKIPSVIGKIF---VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + K + + L+K G L+ ++L V Sbjct: 121 DYLNTSNDERKNYLLILFFLNTLIKEEGISLE-----DNSNMEELQVVVETQRKVEIDDN 175 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNI 222 + + + ++ + ++ A + + ++N + + Sbjct: 176 VKRILQYLFEDNLKVVINDEKYKINYIRKAILVLENYINFHLDTNIN 222 >gi|283850612|ref|ZP_06367899.1| Recombination protein O RecO [Desulfovibrio sp. FW1012B] gi|283573855|gb|EFC21828.1| Recombination protein O RecO [Desulfovibrio sp. FW1012B] Length = 250 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 28/75 (37%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + + A++L V + E + + + + G + F G R + + V ++ Sbjct: 1 MEFSEKALVLKVGRFREIDAWVRLFSPVRGLYTAFAFGGMKSRRRFLGCLDAFNHVRFKV 60 Query: 61 RLAQNLGEFRFEVLE 75 R + G + Sbjct: 61 RRSGYRGYHCLTEAK 75 >gi|163816525|ref|ZP_02207889.1| hypothetical protein COPEUT_02715 [Coprococcus eutactus ATCC 27759] gi|158448225|gb|EDP25220.1| hypothetical protein COPEUT_02715 [Coprococcus eutactus ATCC 27759] Length = 247 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 28/178 (15%), Positives = 57/178 (32%), Gaps = 2/178 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 I+L GE + + +T++ GR F + + V ++ ++ Sbjct: 8 HGIVLSSSLQGEYDRRMVALTKERGRITVFATGVRRGTNPLQSKTQMFVMGSFTLIPGRD 67 Query: 66 LGE-FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 +V E + + Y + E + + ++L + L + Sbjct: 68 SYRLVNIDVDEYFHQLTMDIDAYCYASYFCEVMSFMTHEGDRAADYLNLLYVSLKALEKG 127 Query: 125 SVIGK-IFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 + K I E+ L+ G G+ C + G T+ SGG +C Sbjct: 128 QMPAKLIRCVYEIKLMDVFGQGIQSFHCPICGKTEVSNVFDAASGGLLCDGCRGRAKH 185 >gi|304439783|ref|ZP_07399681.1| recombination protein O [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371770|gb|EFM25378.1| recombination protein O [Peptoniphilus duerdenii ATCC BAA-1640] Length = 227 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 23/169 (13%), Positives = 47/169 (27%), Gaps = 2/169 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RSR 61 + + I+L R+ GE + L+V T G + + + + + S+ Sbjct: 2 IRTEGIVLSERNAGESSKALKVYTLDAGLVTIYAKGALKRSSKVTSSSQVFFVNEYTISK 61 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 +L S+ S Y + + E Y +L +L Sbjct: 62 SGVFYYIKSANILSSNLHLRQSLVKLSYANLVLEIYLKSNMEEIENKNAYLLLKKYLETI 121 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 + + + + + IGF + L S Sbjct: 122 EDSTARVRTMQLLLKY-ISFIGFRPAMKGKYFLVDGGGLSPNLEYSSKY 169 >gi|257452392|ref|ZP_05617691.1| DNA repair protein recO [Fusobacterium sp. 3_1_5R] gi|317058935|ref|ZP_07923420.1| DNA repair protein recO [Fusobacterium sp. 3_1_5R] gi|313684611|gb|EFS21446.1| DNA repair protein recO [Fusobacterium sp. 3_1_5R] Length = 219 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 53/141 (37%), Gaps = 1/141 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN-WRSR 61 ++ A +LG S+GE + L V+T +G+ V+ + + I+ L V+ + Sbjct: 5 IRNKAFVLGNYSFGEADRNLIVLTEDFGKIQLTVKGILKSKKRDIVATEALSYVDLLLYK 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + F +E+ A + + + RF+ E +++ +L L Sbjct: 65 KGEQFIISDFSSIENFMAIRQDLDSLSFAFYLLAVVNRFVFEGYRVPKIFKLLKNSLYYL 124 Query: 122 KIPSVIGKIFVQIELMLLKNI 142 V K V + L + Sbjct: 125 NREEVKKKQLVLLNYFLFILM 145 >gi|258405808|ref|YP_003198550.1| DNA repair protein RecO [Desulfohalobium retbaense DSM 5692] gi|257798035|gb|ACV68972.1| DNA repair protein RecO [Desulfohalobium retbaense DSM 5692] Length = 252 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 20/159 (12%), Positives = 52/159 (32%), Gaps = 4/159 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW--- 58 + + ++L V + E + + +++ G GF G R + + +V + Sbjct: 4 EFTEPVVVLHVGLFREADCWVRLLSPSKGVVTGFAFGGMRSRRRFCGCLDAVSKVQFRFQ 63 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 RS+ + L +L+ + + + E++ +L L Sbjct: 64 RSKRGEYLTLCEGALLDRFTGVRQRPGRLGMAVNCLKFVEAVQLGEHGAPEIFALLTQTL 123 Query: 119 NCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGV 156 + + + G+ +L +C++ G Sbjct: 124 QLLDETPALEPVVPLFFRARVAFEHGYQPELDQCLLCGC 162 >gi|298528168|ref|ZP_07015572.1| DNA repair protein RecO [Desulfonatronospira thiodismutans ASO3-1] gi|298511820|gb|EFI35722.1| DNA repair protein RecO [Desulfonatronospira thiodismutans ASO3-1] Length = 237 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 26/187 (13%), Positives = 60/187 (32%), Gaps = 4/187 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNW 58 M + + ++L + E ++ + ++ G GF G R + L + NLV Sbjct: 1 MSFSEKVLVLRTGRFKEHDLWVRFLSPTRGVQTGFAFGGCRSRRRFCGCLDSLNLVLFTI 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSS-LFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + L S +L + + + + + PE + +Y ++ Sbjct: 61 GYSSGKRYLTLQEGTLVSGFQELKNQRDKLGMAVNCLRFVQKICPEGDDSSRIYPLILEV 120 Query: 118 LNCHKIPSVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L + I F + G+ +C V G+ + + + S Sbjct: 121 LEVMENHPDIPIFFPLLFKARAAFIHGYEPVPAECAVCGLGAENMHLGFFSFSDGRVFCP 180 Query: 177 LPYAEKM 183 ++ Sbjct: 181 GCIRDQK 187 >gi|294783435|ref|ZP_06748759.1| DNA repair protein RecO [Fusobacterium sp. 1_1_41FAA] gi|294480313|gb|EFG28090.1| DNA repair protein RecO [Fusobacterium sp. 1_1_41FAA] Length = 231 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 25/228 (10%), Positives = 72/228 (31%), Gaps = 8/228 (3%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVN 57 M + + II+ + E + +++ YG+ ++ + + + + +L Sbjct: 1 MIFLRGKGIIISKKDVEEADRYIDIFMEDYGKISTLIKGIRKSKRRDKTAVDILSLTDFQ 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 + + + ++ + A L + L E +LY++L Sbjct: 61 FYKKNDNIIISNFST-VKDYLAIKSDIDKINMVFYIFSILNQILVENGRNRKLYEVLEKT 119 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L+ K ++ + L + + G +L + P+ Sbjct: 120 LDYLNSSEDNRKNYLLLLYFL----YIVIKEEGISIEGDINELQFEIPEQKKINLDETSK 175 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHC 225 E + + ++ + +S+K A + + ++N + Sbjct: 176 KILEYLFEDKLKIVINDENYELNSVKKAILVLENYINFNLDTNINAKK 223 >gi|331703463|ref|YP_004400150.1| DNA repair protein RecO [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328802018|emb|CBW54172.1| DNA repair protein RecO [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 249 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 6/210 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN--- 57 M I+L + + + I+ + + YG+ + + L N Sbjct: 1 MEKTLKGIVLNSFDFQDYDKIITIYSNLYGKISLVCLGVNKIKSKNKYGINYLSYSNFEI 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 ++S+ NL + + L + + + I L L E+ LY L + Sbjct: 61 FKSKNKFNLSKLKRSELINSFNNISTDFNLYLYANIITSLVLSLDEQIKNYNLYKTLKLS 120 Query: 118 LNCHKIPSV-IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 ++ K+ V LK IG ++L+KC + + + C S Sbjct: 121 ISIINNKPDLGLKVCVLFMFYFLKIIGNQINLSKCGFCNSKINPIIAISFTNY--CSSCK 178 Query: 177 LPYAEKMLVLPSFLWKEEQTIDADSLKSAF 206 Y + +++ + L +I + + Sbjct: 179 FCYFDDCILIDNQLSNFINSIFKNDFITNL 208 >gi|257784593|ref|YP_003179810.1| DNA repair protein RecO [Atopobium parvulum DSM 20469] gi|257473100|gb|ACV51219.1| DNA repair protein RecO [Atopobium parvulum DSM 20469] Length = 249 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 27/180 (15%), Positives = 56/180 (31%), Gaps = 5/180 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 AI+L E+++IL +++ + + + + ++ ++ Sbjct: 10 KAIVLDRTKLAEQDLILTMLSDTGEERRAVAKGARKPGGRFAARVELFCELDVLLAEGRS 69 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML----NIFLNCH 121 L L A L + +I + RF L Sbjct: 70 LDILSEATLLEPHATLRGDLSKVAAASAICEVARFSCIDGVEDAFLFSLLSRALKACEEV 129 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 + + +L + G+ +L C+ G + L + SP +GGA+C S Sbjct: 130 DDEKHLDLVVAAYVFKVLAHEGWRPELASCIACGD-EALTYFSPTAGGALCGSCAHEIEG 188 >gi|257465815|ref|ZP_05630126.1| DNA repair protein recO [Fusobacterium gonidiaformans ATCC 25563] gi|315916972|ref|ZP_07913212.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563] gi|313690847|gb|EFS27682.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563] Length = 219 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 52/141 (36%), Gaps = 1/141 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN-WRSR 61 ++ A +LG S+GE + L V+T +G+ V+ + + + L V+ + Sbjct: 5 IRNKAFVLGNYSFGEADRNLIVLTEDFGKIQLTVKGILKSKKRDKVATEALSYVDLLLYK 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + F +E+ A + + + RF+ E +++ +L L Sbjct: 65 KGEQFIISDFSSIENFMAIRQDLDSLSFAFYLLALVNRFVFEGYRVPKIFQLLKNSLYYL 124 Query: 122 KIPSVIGKIFVQIELMLLKNI 142 + K V + L + Sbjct: 125 NREATKKKQLVLLNYFLFVLM 145 >gi|325123049|gb|ADY82572.1| DNA repair protein [Acinetobacter calcoaceticus PHEA-2] Length = 227 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 55/164 (33%), Gaps = 17/164 (10%) Query: 10 LGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEF 69 + R Y EK+ I+ + T++YGR G +R Q +R+ + Sbjct: 2 IHHRKYREKSHIVHLFTQEYGRVDGILR-------QTPPPQYQPIRLQATGKSELKN--- 51 Query: 70 RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIG- 128 ++ + F G + R P E + ++ + L + S Sbjct: 52 FTKLEILNQPVFFFGDAFFAGFYLNEIVLRLCPLEEAMPQTFEQYQLTLLQLQQLSSHEN 111 Query: 129 ------KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 +I Q E +LL +G+ +D + Q + + Sbjct: 112 PDLFLRQILRQFEHVLLPELGYAIDFSIDTQQQPIQAHQFYQFQ 155 >gi|213859493|ref|ZP_03385197.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 160 Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 48/151 (31%), Gaps = 7/151 (4%) Query: 84 SSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS-VIGKIFVQIELMLLKNI 142 GL L R L EL+ + + + EL LL ++ Sbjct: 1 GITLYSGLYINELLSRVLEYETRFSELFFDYLNCIQALAGTTGSPEPALRRFELALLGHL 60 Query: 143 GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSL 202 G+G++ T C +G D + + + + D D+L Sbjct: 61 GYGVNFTHCAGSGERVDDTMTYRYREEKGFFASVVIDNNTFTGRHLKALEAREFPDVDTL 120 Query: 203 KSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 ++A + T + AL+ + RE F Sbjct: 121 RAAKRFT-----RMALKPYLGGKPLKSRELF 146 >gi|262066169|ref|ZP_06025781.1| DNA repair protein RecO [Fusobacterium periodonticum ATCC 33693] gi|291380143|gb|EFE87661.1| DNA repair protein RecO [Fusobacterium periodonticum ATCC 33693] Length = 231 Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 27/227 (11%), Positives = 72/227 (31%), Gaps = 6/227 (2%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW- 58 M + + II+ + E + +++ YG+ ++ + + + L ++ Sbjct: 1 MIFLRGKGIIISKKDVEEADRYIDIFMEDYGKVSTLIKGIRKSKKRDKTAVDILSLTDFQ 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + +L F ++ + A L + L E +LY++L L Sbjct: 61 FYKKNDSLIISNFSTVKDYLAIKSDIDKINMAFYIFSILNQILVENGRNRKLYEVLEKTL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + K ++ + L + + G +L + P+ Sbjct: 121 DYLNSSEDNRKNYLLLLYFL----YIVIKEEGISIEGDINELQFEVPEQKKINLDETSKR 176 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHC 225 E + + ++ +S+K A + + ++N + Sbjct: 177 ILEYLFEDKLKIVINDENFKINSVKKAILVLENYINSNLDTNINAKK 223 >gi|310779162|ref|YP_003967495.1| DNA repair protein RecO [Ilyobacter polytropus DSM 2926] gi|309748485|gb|ADO83147.1| DNA repair protein RecO [Ilyobacter polytropus DSM 2926] Length = 241 Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 24/227 (10%), Positives = 71/227 (31%), Gaps = 7/227 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRSR 61 D +I+ YGE + ++ + +R+YG+ ++ + + + ++ + + + Sbjct: 5 SSDGVIIKKLDYGEADRLITIFSRRYGKIQLNIKGIRKSKRRDKNAVELLAFSKFVFYRK 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + L+S + + + L L E + LYD +N Sbjct: 65 GERLITTNFEL-LDSFWGIRSNIKNIEIIMYILSVLNNILVENQRKSVLYDYFLKVINYL 123 Query: 122 KIPSVIGKIF---VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 K +++ G +L++ ++ + + S Sbjct: 124 DKSENQIKNHLLVCHFLSKMIQEEGIAFELSE-GEYFDIENSKFRKNSGSYFLKLSKMEK 182 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHC 225 + + ++ D +K + + ++N + Sbjct: 183 KILENISGEKSDGVLKEIRDITVVKKVINILERYINYHLHTSLNFKH 229 >gi|313905843|ref|ZP_07839201.1| DNA repair protein RecO [Eubacterium cellulosolvens 6] gi|313469357|gb|EFR64701.1| DNA repair protein RecO [Eubacterium cellulosolvens 6] Length = 215 Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 44/147 (29%), Gaps = 3/147 (2%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 ++L GE + + ++TR+ GR F R + Q + A V + ++ Sbjct: 9 GMVLSASPVGENDKRVVLLTRELGRISAFARGARRPGNQLMAVANPFVFGQFTLIPGRSA 68 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPC--LELYDMLNIFLNCHKIP 124 + + ++ +Y + + L + K Sbjct: 69 YSLVRAEIRDYFTEIAVEYPGVYYGYYFLDFAGYYGREGLDATDMLNLLYLTVKALLKKN 128 Query: 125 SVIGKIFVQIELMLLKNIG-FGLDLTK 150 + EL L+ G F D + Sbjct: 129 LDNRLVRRIFELRLMTMNGEFAPDPSG 155 >gi|270631537|ref|ZP_06222006.1| DNA repair protein RecO [Haemophilus influenzae HK1212] gi|270317531|gb|EFA29000.1| DNA repair protein RecO [Haemophilus influenzae HK1212] Length = 141 Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 42/140 (30%), Gaps = 6/140 (4%) Query: 99 RFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQ 158 R + P L+ L + + E LL+ +G+G+D C +G Sbjct: 4 RVIESETPNPALFQHYLKCLTGLATETNVEPTLRLFEFQLLQILGYGVDFLHCAGSGEPV 63 Query: 159 DLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYAL 218 D + + ++ D ++A + T + AL Sbjct: 64 DCPMTYRYREEKGFIASLVKDNLTFYGRDLLAFEALDFSDDAVRQAAKRFT-----RIAL 118 Query: 219 QHNIIHCH-LLRENFLGKLL 237 + + RE F +L Sbjct: 119 KPYLGDKPLKSRELFSQHIL 138 >gi|210633810|ref|ZP_03297857.1| hypothetical protein COLSTE_01774 [Collinsella stercoris DSM 13279] gi|210159070|gb|EEA90041.1| hypothetical protein COLSTE_01774 [Collinsella stercoris DSM 13279] Length = 255 Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 51/166 (30%), Gaps = 14/166 (8%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGR-HLGFVRNGQS--HRMQPILQAGNLVRVNWR 59 ++ AI+L E ++IL + + GR + + R+ + V V + Sbjct: 7 FRTKAIVLDKTKLKETDLILT-LVGESGRQIRAVAKGARKPGSRLAARCELCCEVDVLFA 65 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + +++ S S L E +Y + L Sbjct: 66 H-GRNLDIVSQADLIASPLGAQPSYELLTAASAVAEVAETCTYEDAEDPFVYAITRAVLA 124 Query: 120 CH---------KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + P+ + + LL ++G+ D + CV G Sbjct: 125 HLAAAGADTPVEGPAHLDLLVAAYIFKLLSHVGYRPDYSACVACGD 170 >gi|283796158|ref|ZP_06345311.1| DNA repair protein RecO [Clostridium sp. M62/1] gi|291076377|gb|EFE13741.1| DNA repair protein RecO [Clostridium sp. M62/1] Length = 215 Score = 56.0 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 47/147 (31%), Gaps = 4/147 (2%) Query: 1 MY--WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW 58 M Q +++ G+ + L ++T++ G+ F R + Q V + Sbjct: 1 MRELIQATGMVISASPVGDYDKRLVILTKERGKITCFARGAKRAASQLRAPCRPFVFGVF 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLF-LYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 ++ +E++ +L S Y + E E +L Sbjct: 61 SLTEGRDAYNLYGAEVENYFDELASDMECACYASYFAEFAGYYGRENVDESETIRLLYQS 120 Query: 118 LNCHKIPSVIGKI-FVQIELMLLKNIG 143 P++ ++ EL L+ G Sbjct: 121 FRALLKPAIPNRLVRRIFELRLMAIQG 147 >gi|269120185|ref|YP_003308362.1| DNA repair protein RecO [Sebaldella termitidis ATCC 33386] gi|268614063|gb|ACZ08431.1| DNA repair protein RecO [Sebaldella termitidis ATCC 33386] Length = 219 Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 17/133 (12%), Positives = 46/133 (34%), Gaps = 1/133 (0%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 + + I++ + E +++L+V T++YG+ ++ + + + L + ++ Sbjct: 3 ILKTEGIVIKKTNVKEADLVLKVFTKEYGKIDIYINGIRKSKRREKLAVELMSVTDFLIY 62 Query: 62 LAQNLGEFRFEVLESHCAKL-LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + L + K+ LS Y + + + +E Y+ + Sbjct: 63 EKNSKYSSNSFTLTAFFPKIQLSFLKLKYSYYLLHLIDKIYEHNSEDIEFYEKIKNLFGY 122 Query: 121 HKIPSVIGKIFVQ 133 S K Sbjct: 123 INTLSEDEKKTEI 135 >gi|221194425|ref|ZP_03567482.1| DNA repair protein RecO [Atopobium rimae ATCC 49626] gi|221185329|gb|EEE17719.1| DNA repair protein RecO [Atopobium rimae ATCC 49626] Length = 249 Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 63/180 (35%), Gaps = 5/180 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 A++L GE+++IL +T + + + + V+ ++ Sbjct: 10 KALVLDRTKLGEQDLILTCLTDTGEELRAVAKGARKPGGRLAARTELFSEVDMLVAEGRS 69 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFR-FLPEREPCLELYDMLNIFLNCHKIP 124 L L S K+ + ++ + R E L+ +L+ L + Sbjct: 70 LFVVSEASLLSAHEKIRGDLSRVSAASTLCEIARLTCIEGYTDTFLFPILSRALTAVERA 129 Query: 125 SVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 S + V + + K + G+ +L C+ G + + S ++GG +C S Sbjct: 130 SDEAHLDVIVAAYVFKVLAHGGWRPELHSCIACGD-EAPTFFSSRAGGVLCASCAREVEG 188 >gi|33239847|ref|NP_874789.1| putative recombination protein O [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237373|gb|AAP99441.1| Recombinational DNA repair protein RecO [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 256 Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 50/155 (32%), Gaps = 4/155 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + L V GE + +L ++T + G V + + + + + Sbjct: 8 KGLCLKVGPLGENDRLLTLLTHEEGIVRIAVPGARRPKSRLAATSALTFLELLIGGKSTL 67 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + +V++S + +P E+ + I L + Sbjct: 68 RRARQIKVIKSFSKLGEKLETLSAAQALSELAMLLVGTNDPQPEILQAVLIHLERLQKED 127 Query: 126 VIGK----IFVQIELMLLKNIGFGLDLTKCVVTGV 156 + VQ + LL G+GL + KC TG+ Sbjct: 128 IKPVEALANCVQACVHLLALGGYGLPIQKCCWTGI 162 >gi|303232260|ref|ZP_07318959.1| DNA repair protein RecO [Atopobium vaginae PB189-T1-4] gi|302481670|gb|EFL44731.1| DNA repair protein RecO [Atopobium vaginae PB189-T1-4] Length = 249 Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 21/181 (11%), Positives = 51/181 (28%), Gaps = 6/181 (3%) Query: 6 DAIIL-GVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQ 64 A+++ EK++I+ ++ + + + ++ Sbjct: 10 HALVIDHRVRLKEKDVIVRLLCEDGCLRSAVAKGALRPGGRFASRTELGCEADFLLSEGT 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCL----ELYDMLNIFLNC 120 +L + L + + + L R+L + + + Sbjct: 70 SLDTIQEAQLRNANVHIREDPDTFALACAACELTRYLSSHDARDAYVFAICTAFLAAIKS 129 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYA 180 K + L L+ + G+ L C + + + S GGA+C S Sbjct: 130 AKSRNSALAFMCAYTLKLMAHAGYMPILASCASCSD-EQVAYFSVLDGGALCASCARGQD 188 Query: 181 E 181 Sbjct: 189 M 189 >gi|319947867|ref|ZP_08022054.1| DNA repair protein RecO [Dietzia cinnamea P4] gi|319438473|gb|EFV93406.1| DNA repair protein RecO [Dietzia cinnamea P4] Length = 301 Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 52/182 (28%), Gaps = 11/182 (6%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGR--HLGFVRNGQSHRMQPILQAGNLVRVNW-- 58 + D +++ GE + I+ ++T ++G + RM L+ +V V Sbjct: 4 FTDTGLVVRTYDLGEADRIVTLLTERHGLVRAVARAVRRTRSRMGASLEPFAVVEVQIAP 63 Query: 59 -RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER-EPCLELYDMLNI 116 R + + G + R E P L + Sbjct: 64 GRGSSGLGTVRQATSRESLARPLVADYPAYTSGCVVLETAERLAGEEGAPTPRLLGLAVG 123 Query: 117 FLNCHKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCR 173 L + + LL+ + G+ L CV G SGG VC Sbjct: 124 ALRSLAEHRRAPGLV--ADAFLLRAMAASGWEPVLDCCVRCGALGPHRAFHVASGGTVCV 181 Query: 174 SV 175 Sbjct: 182 HC 183 >gi|260889542|ref|ZP_05900805.1| putative DNA repair protein RecO [Leptotrichia hofstadii F0254] gi|260860953|gb|EEX75453.1| putative DNA repair protein RecO [Leptotrichia hofstadii F0254] Length = 168 Score = 55.2 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 15/135 (11%), Positives = 47/135 (34%), Gaps = 3/135 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI--LQAGNLVRVNWR 59 + + I+L + E ++ + + ++ YG+ + + + + L N V + Sbjct: 3 IIKTNCIVLKKKEMKEADLQVTLFSKDYGKIMATAYGIRKSNKRNVVSLNPLNEVEITLS 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + E++++ + + + + L + + + + +D L L Sbjct: 63 QKN-NYYVVKEVEIIKNFNSIIKNINKLEISLYVLDSIDKIYYMTNENGDFFDKLVEILA 121 Query: 120 CHKIPSVIGKIFVQI 134 I + K + Sbjct: 122 FIDILPCLKKGYKYY 136 >gi|291287432|ref|YP_003504248.1| DNA repair protein RecO [Denitrovibrio acetiphilus DSM 12809] gi|290884592|gb|ADD68292.1| DNA repair protein RecO [Denitrovibrio acetiphilus DSM 12809] Length = 233 Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 53/156 (33%), Gaps = 7/156 (4%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + +AII + Y + + I T +GR FV+ + + + +++ + Sbjct: 5 KTEAIIYKLVRYADSSAIAFAFTEDFGRLKLFVQKAFTKK--GGIMCFMPGMLDFGKKDT 62 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + FE ++ L++ + + I + L E E + L + + Sbjct: 63 DLSKYYSFENNTAYYH-YLNNHEIVMRMHLIFEIIEGLYEPELPDKKLFDLLLKYDDENF 121 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 + I I LK G L C G D Sbjct: 122 RKITPYIIYFI----LKRSGVMFQLDSCYNCGSKDD 153 >gi|322509027|gb|ADX04481.1| recO [Acinetobacter baumannii 1656-2] gi|323519009|gb|ADX93390.1| recombinational DNA repair protein (RecF pathway) [Acinetobacter baumannii TCDC-AB0715] Length = 227 Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 71/234 (30%), Gaps = 21/234 (8%) Query: 10 LGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEF 69 + R Y EK+ I+ + T++YGR G +R Q +R+ + Sbjct: 2 IHHRKYREKSHIVHLFTQEYGRVDGILR-------QTPPPQYQPIRLQATGKSELK---N 51 Query: 70 RFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIG- 128 ++ + F G + R P E + ++ + L + S Sbjct: 52 FTKLEILNQPVFFFGDAFFAGFYLNEIVLRLCPLEEAMPQTFEQYQLTLLQLQQLSSHEN 111 Query: 129 ------KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 +I Q E +LL +G+ +D + L + + + + Sbjct: 112 PDLFLRQILRQFEHILLAELGYAIDFSIDSSQKEI--LSQQFYQFQVNEGFAPVVQASRS 169 Query: 183 MLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENFLGK 235 L + L D QL L + + + R+ ++ Sbjct: 170 SLSGKAILSMLNYEQGQDFSHEQLQLLGK-LYRQMITSLLGDRPLKSRQLWIQN 222 >gi|262037391|ref|ZP_06010855.1| DNA repair protein RecO [Leptotrichia goodfellowii F0264] gi|261748553|gb|EEY35928.1| DNA repair protein RecO [Leptotrichia goodfellowii F0264] Length = 224 Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 15/137 (10%), Positives = 39/137 (28%), Gaps = 2/137 (1%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW- 58 M + ++L + E ++ + TR+YG+ + + + + L + Sbjct: 1 MNILKTKCLVLKNKKINESDLTATIFTREYGKINATAYGIRKSKSRNPITLNPLSMADMT 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + E+++ + L + + + +D L L Sbjct: 61 IHKKNGFYTVNESELIKKFENITKNIEKLEISLYILDSVNKIYDINYEDRIFFDRLIEIL 120 Query: 119 NCHKIPSVIGKIFVQIE 135 I K + Sbjct: 121 EFINTREKILKGYKYYL 137 >gi|217967703|ref|YP_002353209.1| DNA repair protein RecO [Dictyoglomus turgidum DSM 6724] gi|217336802|gb|ACK42595.1| DNA repair protein RecO [Dictyoglomus turgidum DSM 6724] Length = 236 Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 71/207 (34%), Gaps = 9/207 (4%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRL 62 ++ IIL + GE +++L + ++ G+ L R + + + ++ + + R Sbjct: 10 EEGIILFKKKVGEGDLLLTIYGKEKGKFLAIARGALKIKNRLRGKVNIFSIGKGYFVKRR 69 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 +L F + + F+ + + +F+P LE+Y+ L FL Sbjct: 70 EVDLLIFWDSYEK-FFEIIKDVDKFIILSKYLKKADKFIPLEVKDLEIYEYLYKFLK--N 126 Query: 123 IPSVIGKIFVQIELMLLKNIGF----GLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + LL+ +G+ L C + + ++ + C Sbjct: 127 WNLINKYSGDVFLIKLLQKLGYISKVELKCKGCDKDLLKDEYVYFDLDNRKIYCEDCRTL 186 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSA 205 + K+ + E D L Sbjct: 187 KSLKIKSEEVIKFNEILDRTFDELIMG 213 >gi|77414407|ref|ZP_00790561.1| recombination protein O [Streptococcus agalactiae 515] gi|77159554|gb|EAO70711.1| recombination protein O [Streptococcus agalactiae 515] Length = 176 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 25/176 (14%), Positives = 52/176 (29%), Gaps = 2/176 (1%) Query: 33 LGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQ 92 + FV++ + +LQ + + ++ + + Y Sbjct: 1 MFFVKHASKSKFNAVLQPLTIAHFILKINDNGLSYIDDYKEVLAFQETNSDLFKLSYASY 60 Query: 93 SIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCV 152 + + +L+ L L + + E+ LL+ G L+ CV Sbjct: 61 ITSLADVAISDNVADAQLFIFLKKTLELIEDGLDYEILTNIFEVQLLERFGVALNFHDCV 120 Query: 153 VTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPS--FLWKEEQTIDADSLKSAF 206 S K G +C + + + P+ +L Q+I D K Sbjct: 121 FCHRVGLPFDFSHKYSGLLCPNHYYKDERRNHLDPNMLYLINRFQSIQFDDYKQFL 176 >gi|171910510|ref|ZP_02925980.1| DNA repair protein RecO [Verrucomicrobium spinosum DSM 4136] Length = 221 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 18/145 (12%), Positives = 46/145 (31%), Gaps = 3/145 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNW-RS 60 AI++ E ++I+ + + G + + L V + S Sbjct: 32 SATAILINRHRLTESSLIVHWCSPEQGLFKTVAKGALRPQSAFAGRLDLFVTCEVVFLPS 91 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + +++ S + L G + + P ++++L L+ Sbjct: 92 TKSDLHSLKEVHLVQPRLQMRNSYARVLAGTYFSKLVELVVERETPLGGVHELLQKSLDY 151 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFG 145 + ++ + E L + +G G Sbjct: 152 LEGHEPSTRLVHRFENKLCEELGLG 176 >gi|315186752|gb|EFU20510.1| DNA repair protein RecO [Spirochaeta thermophila DSM 6578] Length = 256 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 19/155 (12%), Positives = 50/155 (32%), Gaps = 4/155 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + + +++ R G+++ + +++R+ G Q + A R + + Sbjct: 6 RTEGVVVRSRPVGDQDRAVVILSRE-GLLEATAYGAQRPSSRLGAAAQVGSRAVFYLYVN 64 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 G + ++ L Q L E+Y +L + + Sbjct: 65 PVKGHVKVSDVDRVEVLDAGGLEGLAVFQLWADLVVATHGAGHEAEVYRLLLEGRDALRR 124 Query: 124 PSVIGKIFVQIELMLLK---NIGFGLDLTKCVVTG 155 + ++ + LL+ +G + +C G Sbjct: 125 AGGVEEVERVLLGWLLRFLGLLGVAPEWDRCARCG 159 >gi|318042191|ref|ZP_07974147.1| putative recombination protein O [Synechococcus sp. CB0101] Length = 264 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 19/161 (11%), Positives = 44/161 (27%), Gaps = 7/161 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + ++L GE + ++ V++ G + + + Sbjct: 8 EGLVLRSTPLGESDRLITVLSAGQGLVRLAAPGARKPKSSMAAAVPLALLNLQVGGRGDL 67 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + V + A +P + + + L + L ++ Sbjct: 68 KRVRQLSVQRNFAALAERLESLAAAQGLAEQTLLLVPSGDAVEGVLEDLLLQLARLELVV 127 Query: 126 VIGKIFVQIE-------LMLLKNIGFGLDLTKCVVTGVTQD 159 + V+ + LL G+ L L C +G D Sbjct: 128 KERQANVEALAIAVQGVVHLLALGGYALPLACCARSGTPLD 168 >gi|312898792|ref|ZP_07758180.1| DNA repair protein RecO [Megasphaera micronuciformis F0359] gi|310619954|gb|EFQ03526.1| DNA repair protein RecO [Megasphaera micronuciformis F0359] Length = 245 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 43/145 (29%), Gaps = 1/145 (0%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 D IIL V+ + ++ V T Q GR F G + + R+ + +R N Sbjct: 15 DGIILNVQKHPSGTRLITVFTLQAGRVRVFASGG-GRKRKNGNPFFQFARIAFEARRKDN 73 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + A + Q + + L E L Sbjct: 74 TYTMGEYECRNAKALMNLDWNTYAYTQILAEIVTSLFPEGERDEEVYQLLKAYAETIDYK 133 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTK 150 + + L+ + GF D+ + Sbjct: 134 DVRTATIIAGWQLIASAGFFPDIDR 158 >gi|76798760|ref|ZP_00780977.1| DNA repair protein RecO [Streptococcus agalactiae 18RS21] gi|76585890|gb|EAO62431.1| DNA repair protein RecO [Streptococcus agalactiae 18RS21] Length = 220 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 21/168 (12%), Positives = 48/168 (28%) Query: 33 LGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQ 92 + FV++ + +LQ + + ++ + + Y Sbjct: 1 MFFVKHASKSKFNAVLQPLTIAHFILKINDNGLSYIDDYKEVLAFQETNSDLFKLSYASY 60 Query: 93 SIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCV 152 + + +L+ L L + + E+ LL+ G L+ CV Sbjct: 61 ITSLADVAISDNVADAQLFIFLKKTLELIEDGLDYEILTNIFEVQLLERFGVALNFHDCV 120 Query: 153 VTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDAD 200 S K G +C + + + P+ L+ + Sbjct: 121 FCHRVGLPFDFSHKYSGLLCPNHYYKDERRNHLDPNMLYLINRFQSIQ 168 >gi|328947959|ref|YP_004365296.1| DNA repair protein recO [Treponema succinifaciens DSM 2489] gi|328448283|gb|AEB13999.1| DNA repair protein recO [Treponema succinifaciens DSM 2489] Length = 250 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 25/174 (14%), Positives = 55/174 (31%), Gaps = 6/174 (3%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLG 67 +IL ++ GE N +++V++ + G + G R++ ++Q + S ++N Sbjct: 4 VILSLKESGENNRLVKVISAENGIFNAMLYGGPKSRLKSLVQPFYSGILYIYSDESRNSI 63 Query: 68 EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVI 127 + ++ +S L + L + + +L FL+ Sbjct: 64 KITDFDAQNCHLSFRTSLLKSWAASFACELVLKTKCAGETEKAFVLLCAFLDGIDSVDEN 123 Query: 128 GKIFVQ--IELMLLKNIGFGLDLTKCVVTG----VTQDLLWVSPKSGGAVCRSV 175 L +G + C G + + G VC Sbjct: 124 EARLGILRFVWRYLGLLGLQPEPRTCCGCGSSLLSHEHNASYIERQNGFVCADC 177 >gi|302670579|ref|YP_003830539.1| DNA repair protein RecO [Butyrivibrio proteoclasticus B316] gi|302395052|gb|ADL33957.1| DNA repair protein RecO [Butyrivibrio proteoclasticus B316] Length = 217 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 44/144 (30%), Gaps = 4/144 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSH--RMQPILQAGNLVRVNWRSRLA 63 I+L G+ + + + T + G+ F R+ + ++ +++ + Sbjct: 8 RGIVLKHAPVGDYDWVATIFTAERGKITAFARSARKPSAKLSGLVEPFCFGTFKLFA-GK 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + ++ YG + + E +L ++L L Sbjct: 67 NSYTIAEADIENYFEGFRADLEGACYGTFFLELCSFYTRENNEDKDLLNLLYFSLKALLK 126 Query: 124 PSVIGKI-FVQIELMLLKNIGFGL 146 ++ ++ EL L G Sbjct: 127 ENIPNRLVRCIFELRALVIEGEYP 150 >gi|291458561|ref|ZP_06597951.1| DNA repair protein RecO [Oribacterium sp. oral taxon 078 str. F0262] gi|291419094|gb|EFE92813.1| DNA repair protein RecO [Oribacterium sp. oral taxon 078 str. F0262] Length = 217 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 43/144 (29%), Gaps = 2/144 (1%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SRLAQN 65 ++L R + + L ++T++ G+ + + + V +++ ++ Sbjct: 11 GVVLSSRPSRDYDKCLTLLTKELGKITVWASGAKKPGSPLMAACRPFVFGSFQLAKGRSG 70 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY-DMLNIFLNCHKIP 124 + L + YG + E P E+ + K Sbjct: 71 YNLRSASIARYFTEIALDLTNACYGSYFLEFSDYCAQEGLPSEEMVSLLYLSLCALLKEN 130 Query: 125 SVIGKIFVQIELMLLKNIGFGLDL 148 + EL +L G +L Sbjct: 131 IPNELVRRIFELRMLFLNGEYTEL 154 >gi|320539211|ref|ZP_08038882.1| putative gap repair protein [Serratia symbiotica str. Tucson] gi|320030849|gb|EFW12857.1| putative gap repair protein [Serratia symbiotica str. Tucson] Length = 155 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 47/151 (31%), Gaps = 7/151 (4%) Query: 90 GLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK-IPSVIGKIFVQIELMLLKNIGFGLDL 148 GL L R L + L+ L Q EL LL ++G+GLD Sbjct: 1 GLYVNELLSRVLEQETNYAVLFFDYLKCLQTLAAEEHSPEYALRQFELALLNHLGYGLDF 60 Query: 149 TKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQL 208 C +G D + + E Q D +L++A + Sbjct: 61 LHCAGSGQPVDDGMTYRYREEKGFIASLVVDHYSFTGRELRALAERQFPDMATLRAAKRF 120 Query: 209 TDYFLNKYALQHNIIHCH-LLRENFLGKLLE 238 T + AL+ + RE F + + Sbjct: 121 T-----RLALKPYLGGKPLKSRELFCQLVRK 146 >gi|254303911|ref|ZP_04971269.1| recombination protein RecO [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324103|gb|EDK89353.1| recombination protein RecO [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 233 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 23/227 (10%), Positives = 71/227 (31%), Gaps = 10/227 (4%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW- 58 M + + II+ + E + + + YG+ ++ + + + L ++ Sbjct: 1 MIFLRGKGIIIAKKDIEEADRYITIFMEDYGKVFTVIKGIRKSKKRDKTAVDILSLTDFQ 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + +L F ++ + L + L E ++Y++L L Sbjct: 61 FYKKNDSLIISNFSTVKDYIGIKSDIDKINIAFYIFSMLNQILVENGRNRKIYEVLEKTL 120 Query: 119 NCHKIPSVIGKIF---VQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + K + + L+K G ++ + ++L Sbjct: 121 DYLNTSNDERKNYLLILFFLNTLIKEEGISIE-----DSSHMEELQVEMQNQRKVEIDDN 175 Query: 176 GLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYALQHNI 222 + + + ++ D ++ A + + ++N + + Sbjct: 176 VKKILQYLFEDNLKVVINDEKYKIDYVRKAILVLENYINFHLDTNIN 222 >gi|78778779|ref|YP_396891.1| putative recombination protein O [Prochlorococcus marinus str. MIT 9312] gi|78712278|gb|ABB49455.1| DNA replication and repair protein RecO [Prochlorococcus marinus str. MIT 9312] Length = 261 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 19/158 (12%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRLAQ 64 + + GE + ++ ++T + G V + + N + + + Sbjct: 10 KGLCIKASPLGENDRLITILTDERGIVRLAVPGARRPKSSLAAATPLNYLSLQIFGKRNL 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH--- 121 + ++L+S+ + F + + + L+ Sbjct: 70 KS-VRQIKILKSYAGLGKNIECLAAAQAITELTFLLVGNDDEQQNYLSCVLAHLDRIYLY 128 Query: 122 ----KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + I +Q + LL G L + C TG Sbjct: 129 EVSKEEDIKMLCISIQSLIHLLAIGGINLPIHHCCKTG 166 >gi|257463569|ref|ZP_05627961.1| DNA repair protein recO [Fusobacterium sp. D12] gi|317061124|ref|ZP_07925609.1| DNA repair protein recO [Fusobacterium sp. D12] gi|313686800|gb|EFS23635.1| DNA repair protein recO [Fusobacterium sp. D12] Length = 219 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 57/192 (29%), Gaps = 1/192 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RSR 61 + A +LG S+GE + L ++T +G+ V+ + + + + V + + Sbjct: 5 ISNKAFVLGNYSFGEADRNLILLTEDFGKIQLTVKGILKSKRRDKVATEPISYVEFLLYK 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + F +LES + L +F+ E +++ +L L Sbjct: 65 KGEQFIVNDFSLLESFENIRQDLDSLGVAFYLLAVLNKFVFEGYRVPKIFRLLKNSLYYL 124 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 K + + L + + + L E Sbjct: 125 NQERDRRKQLLLLNYFLFFLMQEEGIFRIDEILEHLSFEEKEISRLLYQKKIESILKEEE 184 Query: 182 KMLVLPSFLWKE 193 FL K+ Sbjct: 185 YTEEKLFFLIKK 196 >gi|11467307|ref|NP_043164.1| hypothetical protein CypaCp027 [Cyanophora paradoxa] gi|1351792|sp|P48323|YCX1_CYAPA RecName: Full=Uncharacterized 24.3 kDa protein in hemA-psbN intergenic region; AltName: Full=ORF206 gi|1016108|gb|AAA81195.1| orf206 [Cyanophora paradoxa] Length = 206 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 56/161 (34%), Gaps = 4/161 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + +AIIL ++ + I + T + G + + ++ + Sbjct: 1 MLFASNAIILKIKQRNSNSYIYTLYTYEEGLKEVIIF--TNQKILCSNLKLYRIYFVLFK 58 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + A R L + + + + L E C +Y + + L Sbjct: 59 KGAPWDQIQRLYPLFFYPKIEQNPLKMIVLEYLSELIIYQLYSPENCTFIYFIFHYTLFQ 118 Query: 121 HKIPSVIGKIFVQI--ELMLLKNIGFGLDLTKCVVTGVTQD 159 I S + + I LLK +G+ +L+ CV TG + + Sbjct: 119 LNICSNNMILPIFISSLYSLLKFLGWEPELSNCVYTGESLN 159 >gi|323483768|ref|ZP_08089148.1| DNA repair protein RecO [Clostridium symbiosum WAL-14163] gi|323692741|ref|ZP_08106969.1| DNA repair protein RecO [Clostridium symbiosum WAL-14673] gi|323402959|gb|EGA95277.1| DNA repair protein RecO [Clostridium symbiosum WAL-14163] gi|323503183|gb|EGB19017.1| DNA repair protein RecO [Clostridium symbiosum WAL-14673] Length = 215 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 15/131 (11%), Positives = 39/131 (29%), Gaps = 3/131 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLA 63 ++L GE + L ++T++ G+ F R + + + + + Sbjct: 8 TGMVLSAFPVGEYDKRLVILTKERGKITAFARGAKRPGSLLRAPSRPFAFGTFSL-AEGR 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + E+ Y + + E E+ +L Sbjct: 67 DAYNLYGAEIENYFEDLEKDMECACYASYFVEFADYYEREGIEATEMLKLLYQSFRALLR 126 Query: 124 PSVIGKIFVQI 134 P++ ++ +I Sbjct: 127 PAIPNRLVQRI 137 >gi|123967986|ref|YP_001008844.1| putative recombination protein O [Prochlorococcus marinus str. AS9601] gi|123198096|gb|ABM69737.1| possible Recombination protein O (RecO) [Prochlorococcus marinus str. AS9601] Length = 261 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 17/158 (10%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRLAQ 64 + + GE + ++ ++T + G V + + + + + Sbjct: 10 KGLCIKASPLGENDRLITILTDEQGIVRLAVPGARRPKSSLAAATPLTYLSLQIFGKRNL 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH--- 121 + ++L+S+ + F + + + + L+ Sbjct: 70 KS-VRQIKILKSYSGLGKNIECLAAAQAITELTFLLVGNNDKQHDYLSCVLAHLDRIYLF 128 Query: 122 ----KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + + +Q + LL G L + C TG Sbjct: 129 KESQEEDIKMLSMSLQSLIHLLAIGGINLPIHHCCKTG 166 >gi|157412811|ref|YP_001483677.1| putative recombination protein O [Prochlorococcus marinus str. MIT 9215] gi|157387386|gb|ABV50091.1| possible Recombination protein O (RecO) [Prochlorococcus marinus str. MIT 9215] Length = 261 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 18/158 (11%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRLAQ 64 + + + GE + ++ ++T + G V + + + + + Sbjct: 10 EGLCIKTSPLGENDRLITILTDEQGIVRLAVPGARRPKSSLAAATPLTYLSLQIFGKRNL 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH--- 121 + ++L+S+ + F + + + L+ Sbjct: 70 KS-VRQIKILKSYSGLGKNIECLAAAQAITELTFLLVGNNDKQQNYLSCVLAHLDRIYLY 128 Query: 122 ----KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + I + +Q + LL G L + C TG Sbjct: 129 EISKEEDIKILSMSIQSLIHLLAIGGINLPIHHCCKTG 166 >gi|91070331|gb|ABE11248.1| putative recombination protein O [uncultured Prochlorococcus marinus clone HF10-88F10] Length = 261 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 17/158 (10%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRLAQ 64 + + + GE + ++ ++T + G V + + + + + Sbjct: 10 EGLCIKASPLGENDRLITILTDEQGIVRLAVPGARRPKSSLAAAIPLTYLSLQIFGKRNL 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH--- 121 + ++L+S+ + F + + + L+ Sbjct: 70 KS-VRQIKILKSYSGLGKNIECLAASQAITELTFLLVGNNDKQQNYLSCVLAHLDRIYLY 128 Query: 122 ----KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + + +Q + LL G L + C TG Sbjct: 129 EESKEEDIKMLSMSIQSLIHLLAIGGINLPIHHCCKTG 166 >gi|332883723|gb|EGK04003.1| DNA repair protein RecO [Dysgonomonas mossii DSM 22836] Length = 280 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 21/161 (13%), Positives = 55/161 (34%), Gaps = 5/161 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGF---VRNGQSHRMQPILQAGNLVRVNWR 59 ++ ++L +Y +K ++ ++ T +GR R S + + ++ + Sbjct: 43 YKTRGLVLNTINYNDKYLLAQLFTESFGRVTYMVSKARGKGSKVPKSLFSPLAILDMEVE 102 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYG-LQSIVPLFRFLPEREPCLELYDMLNIFL 118 + +++ R + + ++ L R L + + L+D L + Sbjct: 103 HQSNRDIQRIREARSDFYLYEIAGDMGKTSMTFFLSEFLSRVLKDADTSQLLFDFLEQSV 162 Query: 119 NCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKCVVTGVTQ 158 ++ F L L +GF +L + + Sbjct: 163 QILEMTDKSIANFHLVFMLKLSHFMGFYPNLEEYRENNLFD 203 >gi|126695756|ref|YP_001090642.1| putative recombination protein O [Prochlorococcus marinus str. MIT 9301] gi|126542799|gb|ABO17041.1| possible Recombination protein O (RecO) [Prochlorococcus marinus str. MIT 9301] Length = 261 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 17/158 (10%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRLAQ 64 + + GE + ++ ++T + G V + + + + + Sbjct: 10 KGLCIKASPLGENDRLITILTDEQGIVRLAVPGARRPKSSLAAATPLTYLGLQIFGKRNL 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH--- 121 + ++L+S+ + F + + + + L+ Sbjct: 70 KS-VRQIKILKSYSGLGKNIECLAAAQAITELTFLLVGNNDKQQDYLSCVLAHLDRIYLF 128 Query: 122 ----KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + + +Q + LL G L + C TG Sbjct: 129 KESQEEDIKMLSMSIQSLIHLLAIGGINLPIHHCCKTG 166 >gi|255534630|ref|YP_003095001.1| DNA recombination and repair protein RecO [Flavobacteriaceae bacterium 3519-10] gi|255340826|gb|ACU06939.1| DNA recombination and repair protein RecO [Flavobacteriaceae bacterium 3519-10] Length = 230 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 18/145 (12%), Positives = 41/145 (28%), Gaps = 3/145 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG--QSHRMQPILQAGNLVRVNW 58 M +L YG+ + +L ++ G F R ++ + L N + + Sbjct: 1 MMQNQVCFLLSYIKYGDNDAVLHCFSKDAGYQSFFARGIYSARNKKKAYLFPLNQIGITV 60 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLF-RFLPEREPCLELYDMLNIF 117 R ++ + L + + L E Y + F Sbjct: 61 VPRRNSGGIPTISKIEMVSQDYDFADVKVNTVLLFVADFLNQVLREETHHSNTYSEIGRF 120 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNI 142 LN + +++ + + Sbjct: 121 LNALYSGDLGAYTAFIFKILSCQGL 145 >gi|254526262|ref|ZP_05138314.1| DNA repair protein RecO [Prochlorococcus marinus str. MIT 9202] gi|221537686|gb|EEE40139.1| DNA repair protein RecO [Prochlorococcus marinus str. MIT 9202] Length = 261 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 18/158 (11%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRLAQ 64 + + + GE + ++ ++T + G V + + + + + Sbjct: 10 EGLCIKASPLGENDRLITILTDEQGIVRLAVPGARRPKSSLAAATPLTYLSLQIFGKRNL 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH--- 121 + ++L+S+ + F + + + L+ Sbjct: 70 KS-VRQIKILKSYSGLGKNIECLAAAQAITELTFLLVGNNDKQQNYLSCVLAHLDRIYLY 128 Query: 122 ----KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + I + +Q + LL G L + C TG Sbjct: 129 EISKEEDIKILSMSIQSLIHLLAIGGINLPIHHCCKTG 166 >gi|297621803|ref|YP_003709940.1| putative DNA repair protein recO [Waddlia chondrophila WSU 86-1044] gi|297377104|gb|ADI38934.1| putative DNA repair protein recO [Waddlia chondrophila WSU 86-1044] Length = 228 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 49/143 (34%), Gaps = 2/143 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 + + IIL + ++++ T+++G + + GQS + L + R Sbjct: 4 IRAEGIILQSLPVKDWDLLITAFTKEFGVMKFYYKKGQSKKRSKGALTSPLTCAEFICRK 63 Query: 63 AQNLGE--FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 V++ H + Y + + R +P LY +L FL+ Sbjct: 64 GNFDLIPLNEISVIDLHIDLRKTLEFLEYSCSWLKLIQRSQLPGKPAPNLYLLLKAFLHS 123 Query: 121 HKIPSVIGKIFVQIELMLLKNIG 143 + L LL++ G Sbjct: 124 LPQFPKPETLHACFLLKLLRHEG 146 >gi|307719318|ref|YP_003874850.1| hypothetical protein STHERM_c16370 [Spirochaeta thermophila DSM 6192] gi|306533043|gb|ADN02577.1| hypothetical protein STHERM_c16370 [Spirochaeta thermophila DSM 6192] Length = 275 Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 19/155 (12%), Positives = 50/155 (32%), Gaps = 4/155 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 + + +++ R G+++ + +++R+ G Q + A R + + Sbjct: 25 RTEGVVVRSRPVGDQDRQVVILSRE-GLLEATAYGAQRPSSRLGAAAQVGSRAVFYLYVN 83 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 G + ++ L Q L E+Y +L + + Sbjct: 84 PVKGHVKVSDVDRVEVLGAGRLEGLAVFQLWADLVVATHGAGHEAEVYRLLLEGRDALRR 143 Query: 124 PSVIGKIFVQIELMLLK---NIGFGLDLTKCVVTG 155 + ++ + LL+ +G + +C G Sbjct: 144 AGGVEEVERVLVGWLLRFLGLLGVAPEWDRCARCG 178 >gi|269123605|ref|YP_003306182.1| Recombinational DNA repair protein (RecF pathway)-like protein [Streptobacillus moniliformis DSM 12112] gi|268314931|gb|ACZ01305.1| Recombinational DNA repair protein (RecF pathway)-like protein [Streptobacillus moniliformis DSM 12112] Length = 215 Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 28/211 (13%), Positives = 61/211 (28%), Gaps = 11/211 (5%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--PILQAGNLVRVNWRS 60 D AIIL + ++++ + T+++G+ + N ++ + + + ++ V Sbjct: 4 INDVAIILNKKEISGSSVLVTMFTKEHGKISAIIFNARNSKKKHLASIMPLSISDVELEI 63 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + + +S LL L + L + L P ELY+ L Sbjct: 64 KSNSKIIKNSILK-KSFDKSLLKIEKLQLSLYVLHSLNQVLEFDNPEEELYNKSIEILEY 122 Query: 121 HK--------IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + I V L+ +G G+ + S A Sbjct: 123 INELDENTFLDVNFNIFILVTFLRRLMIELGIYDISQLINQYGLIDEYKDYITYSKNANL 182 Query: 173 RSVGLPYAEKMLVLPSFLWKEEQTIDADSLK 203 + +D + Sbjct: 183 ENTNSLITMLNCFQDYINNYFNIKLDYKKIL 213 >gi|21903732|gb|AAM78623.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315] Length = 218 Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 56/173 (32%), Gaps = 2/173 (1%) Query: 33 LGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQ 92 + FV++ +M I+Q + ++ + + ++ Y Sbjct: 1 MFFVKHISRSKMSSIIQPLTIADFIFKLNDTGLSYVVDYSNVNTYRYINNDIFRLAYASY 60 Query: 93 SIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCV 152 + + + E L+ L L+ + + E+ +L G L+ +C Sbjct: 61 VLALADAAIADNESDSHLFTFLKKTLDLMEEGLDYEILTNIFEIQILDRFGISLNFHECA 120 Query: 153 VTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPS--FLWKEEQTIDADSLK 203 + T L S + +C + + P+ +L Q I D L+ Sbjct: 121 ICHRTDLPLDFSHRFSAVLCSEHYYKDNRRNHLDPNVIYLLSRFQKITFDDLR 173 >gi|300770681|ref|ZP_07080560.1| recombination protein O [Sphingobacterium spiritivorum ATCC 33861] gi|300763157|gb|EFK59974.1| recombination protein O [Sphingobacterium spiritivorum ATCC 33861] Length = 240 Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 16/153 (10%), Positives = 46/153 (30%), Gaps = 5/153 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVR----V 56 M + I L + +Y E +++++V T +G V + + + + + Sbjct: 1 MLHKTKGIALKLTNYSESSVVVQVYTESFGLQSYLVNGAKKPKAKIKANLFQPLHLLELI 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + + + L++ L +++ L++ + Sbjct: 61 VYHKDNNNLQRISEAHQTPPLLDLPYNIIKSSIAIFLNEVLYKSLKQQQHDGFLFNFIFQ 120 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDL 148 + F + L +GF ++ Sbjct: 121 SIRYLDETDHSLANFHLTFLIKLSMFLGFLPNV 153 >gi|309805276|ref|ZP_07699328.1| DNA repair protein RecO [Lactobacillus iners LactinV 09V1-c] gi|308165510|gb|EFO67741.1| DNA repair protein RecO [Lactobacillus iners LactinV 09V1-c] Length = 221 Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 51/161 (31%), Gaps = 2/161 (1%) Query: 25 MTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA--QNLGEFRFEVLESHCAKLL 82 MT + G ++ G + + + N N+ ++V+ Sbjct: 1 MTAENGIFTLLIKGGLKPKSRLLPATINFSYGNYLINTNYCGLSVLRNYKVVHQLEHIYF 60 Query: 83 SSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNI 142 Y + + + +P + Y ++ L I +EL LL Sbjct: 61 DFKGNAYANYLLDLVDHAYADYQPLGKNYYLVFNALVKINEGIDNEIICQMVELKLLSAF 120 Query: 143 GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 G + CV +Q + S + GG VC++ +M Sbjct: 121 GTMPEFRHCVFCDASQGIFDFSLQLGGIVCKNHFGSANTRM 161 >gi|288871673|ref|ZP_06118541.2| DNA repair protein RecO [Clostridium hathewayi DSM 13479] gi|288862487|gb|EFC94785.1| DNA repair protein RecO [Clostridium hathewayi DSM 13479] Length = 223 Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 13/117 (11%), Positives = 37/117 (31%), Gaps = 1/117 (0%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++L GE + L ++T++ G+ F R + + + ++ Sbjct: 11 TGMVLKAVPSGEMDKRLVILTKERGKVTAFARGARRPGSMLMACGRPFAFGQFTLYEGRD 70 Query: 66 LGEFRFEVLESHCAKLLSSSL-FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + ++ +L + YG + + E + +L + Sbjct: 71 AYSLQSAEISNYFDELSTDVEGTCYGSYFLEFSDYYTRENMDGTAMLKLLYQSVRAL 127 >gi|225619303|ref|YP_002720529.1| putative D repair protein recO [Brachyspira hyodysenteriae WA1] gi|225214122|gb|ACN82856.1| putative D repair protein recO [Brachyspira hyodysenteriae WA1] Length = 260 Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 39/261 (14%), Positives = 74/261 (28%), Gaps = 26/261 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M +A IL Y +II +T + S L++ + + +N Sbjct: 1 MIKNTNAFILSYNQYKTSSIIASFLTENS-IMQAICHKAKNNSKAFGSDLESISKLNINI 59 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM--LNI 116 + L + + + L S + I + + + M Sbjct: 60 YEKKENQLSILKESSIIKNYKILEKSIYSSLAVFYIREVLLYCAKDFDNRYFVLMEKTLD 119 Query: 117 FLNCHKIPSVIGKIFVQI--------ELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSG 168 L + KI E+ L G L KC + G D+ + S G Sbjct: 120 ALESLEEHYNDDKIKKIYINILIRAFEMKTLHIAGISPHLDKCTICGNNNDISYYSILEG 179 Query: 169 GAVCRSVGLPYAEKMLVL-----------PSFLWKEEQTIDADSLK-SAFQLTDYFLNKY 216 G +C+ + + ++ + L + + D + + Y +NK Sbjct: 180 GLICQKCRNLIKDSINIMDYDIAFMRIIKHTSLIEIIKNEDLKKIYNDSIDNVKYIMNKS 239 Query: 217 ALQHNIIHCHLLRENFLGKLL 237 H + LL Sbjct: 240 IFNHINKTI-KSQSVLEEILL 259 >gi|227539207|ref|ZP_03969256.1| possible DNA repair protein [Sphingobacterium spiritivorum ATCC 33300] gi|227240889|gb|EEI90904.1| possible DNA repair protein [Sphingobacterium spiritivorum ATCC 33300] Length = 240 Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 16/153 (10%), Positives = 46/153 (30%), Gaps = 5/153 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVR----V 56 M + I L + +Y E +++++V T +G V + + + + + Sbjct: 1 MLHKTKGIALKLTNYSESSVVVQVYTESFGLQSYLVNGAKKPKAKIKANLFQPLHLLELI 60 Query: 57 NWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNI 116 + + + L++ L +++ L++ + Sbjct: 61 VYHKDNNNLQRISEAHQTPPLLDLPYNIVKSSIAIFLNEVLYKSLKQQQHDGFLFNFIFQ 120 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDL 148 + F + L +GF ++ Sbjct: 121 SIRYLDETDHSLANFHLTFLIKLSMFLGFLPNV 153 >gi|315653577|ref|ZP_07906497.1| DNA repair protein RecO [Lactobacillus iners ATCC 55195] gi|315488939|gb|EFU78581.1| DNA repair protein RecO [Lactobacillus iners ATCC 55195] Length = 221 Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 51/161 (31%), Gaps = 2/161 (1%) Query: 25 MTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA--QNLGEFRFEVLESHCAKLL 82 MT + G ++ G + + + N N+ ++V+ Sbjct: 1 MTAENGIFTLLIKGGLKPKSRLLPATINFSYGNYLINTNYCGLSVLRNYKVVHQLEHIYF 60 Query: 83 SSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNI 142 Y + + + +P + Y ++ L I +EL LL Sbjct: 61 DFKGNAYANYLLDLVDHAYADYQPLGKNYYLVFNALMKINEGIDNEIICQMVELKLLSAF 120 Query: 143 GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 G + CV +Q + S + GG VC++ +M Sbjct: 121 GTMPEFRHCVFCDASQGIFDFSLQLGGIVCKNHFGSANTRM 161 >gi|212550407|ref|YP_002308724.1| DNA repair protein RecO [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|254790508|sp|B6YQ41|RECO_AZOPC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|212548645|dbj|BAG83313.1| DNA repair protein RecO [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 241 Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 21/156 (13%), Positives = 55/156 (35%), Gaps = 5/156 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR---MQPILQAGNLVRVN 57 M ++ AI L +Y + I+ V+T ++G + + + +LV + Sbjct: 1 MLYKTKAITLYNINYNDNYSIVHVLTEEFGPVSYLTAKFKKQKTHLSKSFFHPLSLVELE 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFLY-GLQSIVPLFRFLPEREPCLELYDMLNI 116 + + + + LL++ + + + + L E++ L++ + Sbjct: 61 VEHKNLREIQYIKEAKTYIPLVSLLNNPIKSSICIFLAEFISKALKEKQSDKLLFNYILQ 120 Query: 117 FLNCHKIPSVIGKIFVQ-IELMLLKNIGFGLDLTKC 151 + + F + L + +GF + T Sbjct: 121 SIQVLEFIEKNYSNFHLVFTIRLSQFLGFYPNNTDY 156 >gi|302385325|ref|YP_003821147.1| DNA repair protein RecO [Clostridium saccharolyticum WM1] gi|302195953|gb|ADL03524.1| DNA repair protein RecO [Clostridium saccharolyticum WM1] Length = 221 Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 45/130 (34%), Gaps = 1/130 (0%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 +++ V GE + L ++TR+ G+ F R + + + + ++ Sbjct: 8 TGMVIRVSPVGEMDKRLVILTRERGKITAFARGSRRPGSPLMAVSRPFAFGQFSLYEGRD 67 Query: 66 LGEFRFEVLESHC-AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 R + ++ A L YG + + E L +L + P Sbjct: 68 SYTLRSAEIINYFDALSLDMEGTCYGSYFLELADYYARENMDGTGLLKLLYQSIRALLKP 127 Query: 125 SVIGKIFVQI 134 ++ ++ ++ Sbjct: 128 ALKNQLVQRV 137 >gi|255012606|ref|ZP_05284732.1| hypothetical protein B2_01764 [Bacteroides sp. 2_1_7] Length = 241 Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 49/138 (35%), Gaps = 4/138 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFV---RNGQSHRMQPILQAGNLVRVN 57 M + I+L Y +K I+ + T +GR V R +S + + +++ + Sbjct: 1 MLCKTRGIVLHTIPYNDKYSIIYMYTEAFGRASYLVSRSRGKKSTVSKALFIPLSVLEME 60 Query: 58 WRSRLAQNLGEFRFEVLESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDMLNI 116 ++L + + + + L LFR + + EP L+D L Sbjct: 61 VEHLNKRDLHRIKETRICFPLNDVCCDPVKNVLALFLSEVLFRVVKDTEPDPRLFDYLYE 120 Query: 117 FLNCHKIPSVIGKIFVQI 134 ++ + F + Sbjct: 121 SIHLLEYADKGIANFHMV 138 >gi|325971473|ref|YP_004247664.1| DNA repair protein recO [Spirochaeta sp. Buddy] gi|324026711|gb|ADY13470.1| DNA repair protein recO [Spirochaeta sp. Buddy] Length = 251 Score = 51.7 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 46/151 (30%), Gaps = 2/151 (1%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 AI+L + +G+ N L++++ +G + + + Sbjct: 4 NVSSLAIVLHSQRHGQLNRRLKLLSVDFGIIDVISYGARKSLKSVKAEVFTDAQFFLYYN 63 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + + + + Y L E E Y +L+ L+ Sbjct: 64 PVKKDYTLKDAQVVATHDDIRDDLSRTYCALFFCELLLKTNGGESAGE-YQLLSTALDML 122 Query: 122 -KIPSVIGKIFVQIELMLLKNIGFGLDLTKC 151 P +I +Q L +G DLT C Sbjct: 123 TAFPKRTDQILIQFVHRLTDLLGLRTDLTSC 153 >gi|239627752|ref|ZP_04670783.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239517898|gb|EEQ57764.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 216 Score = 51.7 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 57/198 (28%), Gaps = 14/198 (7%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++L G+ + L ++TR+ GR F + + + + ++ Sbjct: 8 TGMVLISAPSGDYDRRLVLLTRERGRITAFAHGARKPGNPLMASSRPFSFGTFTLYEGRS 67 Query: 66 LGEFRFEVLESHC-AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + + ++ L YG + F E EL +L L P Sbjct: 68 AYNLQSSQIANYFDGLSLDMECTCYGSYFLEVADYFSQENMDGTELLKLLYQSLRALLNP 127 Query: 125 SVIGKIFVQ-IELMLLKNIGFG------LDLTKC------VVTGVTQDLLWVSPKSGGAV 171 S+ ++ + EL + G C VV + L K Sbjct: 128 SIPNRLARRVFELKSMVINGEYTEEPPRPVSESCSYAWEYVVCSQVESLYKFILKDDVMR 187 Query: 172 CRSVGLPYAEKMLVLPSF 189 + + + V F Sbjct: 188 EFESVVEASRRYYVRHEF 205 >gi|291563936|emb|CBL42752.1| DNA replication and repair protein RecO [butyrate-producing bacterium SS3/4] Length = 217 Score = 51.7 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 50/144 (34%), Gaps = 2/144 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 +++ GE + L ++T + G+ F R + + + V + ++ Sbjct: 8 TGMVIKSAPAGEYDRRLVILTCERGKITAFARGARRPGSTLMAASAPFVFGTFALYEGRD 67 Query: 66 LGEFRFEVLESHCAKLLSSSL-FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 ++++ ++ YG + + E +E +L L Sbjct: 68 AYSLVSVDVQNYFREITEDMEAACYGSYFLEFADYYGRENLEAVETLKLLYQSLRALLKS 127 Query: 125 SVIGKIFV-QIELMLLKNIGFGLD 147 ++ ++ EL L++ G ++ Sbjct: 128 AIPNRLVRAVFELKLMEINGEYME 151 >gi|302335753|ref|YP_003800960.1| DNA replication and repair protein RecO [Olsenella uli DSM 7084] gi|301319593|gb|ADK68080.1| DNA replication and repair protein RecO [Olsenella uli DSM 7084] Length = 250 Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 55/184 (29%), Gaps = 6/184 (3%) Query: 3 WQDDAIIL-GVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RS 60 ++ AI++ E+++IL ++ + + + ++ + Sbjct: 7 YRTKAIVVDRRTRLKEQDLILVLLAEDGSEKSVVAKGALKPGGRLAARVDFFGETDFLLA 66 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R +H A + LY + + L Sbjct: 67 RGRSLDVVAEASSTNAHLAIRGDLARMSAASAICEVARLTCFADVRDPFLYPICSRALCA 126 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + G + + LK + G+ +L C G +D+ + S SGG +C S Sbjct: 127 CEEAGDQGHLDLVAAAYALKVLAHGGWRPELRFCTSCGD-EDVAFFSVASGGMLCASCAK 185 Query: 178 PYAE 181 A Sbjct: 186 DVAG 189 >gi|332300655|ref|YP_004442576.1| hypothetical protein Poras_1475 [Porphyromonas asaccharolytica DSM 20707] gi|332177718|gb|AEE13408.1| hypothetical protein Poras_1475 [Porphyromonas asaccharolytica DSM 20707] Length = 243 Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 54/152 (35%), Gaps = 5/152 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWR 59 M + I+L V Y ++++I + T +G V G+S + Q +++ Sbjct: 1 MITTVEGIVLRVIPYSDRSLIATLYTDLWGATAFSVPIGGRSRATSNLFQPLRGLQITTP 60 Query: 60 SRLAQNLGEFRFEVLESHC-AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 S +Q + R L + Y L L L + L LY+++ L Sbjct: 61 SPASQPVKLIRQVQLVRGALPLAQRPAASGYFLYLSQLLRELLAQEPEDLHLYNIVAQAL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNI---GFGLD 147 + ++ +L+ + G+ + Sbjct: 121 EQLDGMETLEELQGFDLALLVSILRAKGYLPE 152 >gi|88797950|ref|ZP_01113537.1| DNA repair protein [Reinekea sp. MED297] gi|88779147|gb|EAR10335.1| DNA repair protein [Reinekea sp. MED297] Length = 227 Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 46/177 (25%), Gaps = 10/177 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++ R GE + + T + G + + W R + Sbjct: 10 HGYLIHHRPVGEHRYLAWLFTAEQGLVRTLATGQVPEKAR---------LAEWSLRTREQ 60 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 R + + + + L LFR P L+ + L P Sbjct: 61 ESRLRDFRFTAPR-LVQTQAACFLTLYVHELLFRLAPVGIGETTLFQSFSACLVHLNYPD 119 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 E LL+ +G G+D V Q + +S Y + Sbjct: 120 RQVLALRTFEAELLRALGQGIDYRFDVQQRPIQFDQRYEFHAQQGFDQSGQGLYTGQ 176 >gi|315652501|ref|ZP_07905485.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] gi|315485217|gb|EFU75615.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] Length = 214 Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 7/103 (6%), Positives = 33/103 (32%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 + I++ G+ + + + T++ G+ F + + Q + A ++ Sbjct: 4 NIELTGIVIKSMPVGDFDRRVTIFTKERGKIYAFAKGARRINNQMMGYARIFAYGKFKLY 63 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER 104 ++ + ++ ++ + + + + Sbjct: 64 EGRDSYNIISADIANYFEEISDDIESTCYGTYFLEMLDYYTKE 106 >gi|313886765|ref|ZP_07820472.1| putative DNA repair protein RecO [Porphyromonas asaccharolytica PR426713P-I] gi|312923806|gb|EFR34608.1| putative DNA repair protein RecO [Porphyromonas asaccharolytica PR426713P-I] Length = 243 Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 54/152 (35%), Gaps = 5/152 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWR 59 M + I+L V Y ++++I + T +G V G+S + Q +++ Sbjct: 1 MITTVEGIVLRVIPYSDRSLIATLYTDLWGATAFSVPIGGRSRATSNLFQPLRGLQITTP 60 Query: 60 SRLAQNLGEFRFEVLESHC-AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 S +Q + R L + Y L L L + L LY+++ L Sbjct: 61 SPASQPVKLIRQVQLVRGALPLAQRPAASGYFLYLSQLLRELLAQEPEDLHLYNIVAQAL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNI---GFGLD 147 + K+ +L+ + G+ + Sbjct: 121 EQLDGMETLEKLQGFDLALLVSILRAKGYLPE 152 >gi|183221473|ref|YP_001839469.1| DNA repair protein RecO [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911560|ref|YP_001963115.1| recombinational DNA repair protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|254764639|sp|B0SB31|RECO_LEPBA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254764640|sp|B0SSV3|RECO_LEPBP RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|167776236|gb|ABZ94537.1| Recombinational DNA repair protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779895|gb|ABZ98193.1| DNA repair protein RecO (Recombination protein O) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 249 Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 79/245 (32%), Gaps = 9/245 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPIL--QAGNLVRVNWRSR 61 ++ II+ + GE + ++ + R + + + + I+ + G LV V++ + Sbjct: 5 KEIGIIIQSKDIGESDRLISLAGETQVRMNFISKGIRKSKRRAIISTELGCLVEVDYYDQ 64 Query: 62 LA-QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + +++ + L+ L + P+ E LY +L+ L Sbjct: 65 VEKDWKSTKEIHLIKRYDELKKDYVGTLFVLYLTELTSQLYPDGENHPFLYQLLSGSLEV 124 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV---TQDLLWVSPKSGGAVCRSVGL 177 +I +L L ++G C G T+ + S S +C Sbjct: 125 SNENGFRKEILPFFKLRALTHMGHFPTEFYCHTCGEEVLTKAKAYFSVDSREFLCSDCHP 184 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSL---KSAFQLTDYFLNKYALQHNIIHCHLLRENFLG 234 + + VL F + + K A + L+ + F Sbjct: 185 ITKDHLPVLKLFHTMLSKKFSNVLVIFPKEAEYREGDMILNQFLRSLLGRELKSYFEFYK 244 Query: 235 KLLEL 239 + +L Sbjct: 245 TIGDL 249 >gi|91069838|gb|ABE10770.1| putative recombination protein O [uncultured Prochlorococcus marinus clone ASNC1092] Length = 261 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 17/162 (10%), Positives = 49/162 (30%), Gaps = 9/162 (5%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRS 60 ++ + + GE + ++ ++T + G V + + + + Sbjct: 6 EYRLKGLCIKASPLGENDRLITILTDEKGILRLAVPGARRPKSSLAAATPLTYLSLQIFG 65 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + ++L+S+ + F + + + + L+ Sbjct: 66 KRNLKS-VRQIKILKSYSGLGKNIECLAAAQAITELTFLLVGNNDKQQDYLSCVLAHLDR 124 Query: 121 H-------KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + + +Q + LL G L + C TG Sbjct: 125 IYLYKESQEEDIKMLSMSIQSLIHLLAIGGINLPIHHCCKTG 166 >gi|77408837|ref|ZP_00785565.1| recombination protein O [Streptococcus agalactiae COH1] gi|77172568|gb|EAO75709.1| recombination protein O [Streptococcus agalactiae COH1] Length = 88 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 11/74 (14%), Positives = 31/74 (41%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 Q ++L R+Y E + ++++ T G+ + FV++ + +LQ + + Sbjct: 5 QTYGLVLYNRNYREDDKLVKIFTETEGKRMFFVKHASKSKFNAVLQPLTIAHFILKINDN 64 Query: 64 QNLGEFRFEVLESH 77 ++ + + Sbjct: 65 GLSYIDDYKEVLAF 78 >gi|91069973|gb|ABE10901.1| putative recombination protein O [uncultured Prochlorococcus marinus clone ASNC2259] Length = 261 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 16/158 (10%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRLAQ 64 + + GE + ++ +++ + G V + + + + + Sbjct: 10 KGLCIKASPLGENDRLITILSDEQGIVRLAVPGARRPKSSLAAATPLTYLSLQIFGKRNL 69 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH--- 121 + ++L+S+ + F + + + + L+ Sbjct: 70 KS-VRQIKILKSYSGLGKNIECLAAAQAITELTFLLVGNNDKQQDYLSCVLAHLDRIYLF 128 Query: 122 ----KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + + +Q + LL G L + C TG Sbjct: 129 KESQEEDIKMLSMSIQSLIHLLAIGGINLPIHHCCKTG 166 >gi|257125641|ref|YP_003163755.1| DNA repair protein RecO [Leptotrichia buccalis C-1013-b] gi|257049580|gb|ACV38764.1| DNA repair protein RecO [Leptotrichia buccalis C-1013-b] Length = 231 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 47/135 (34%), Gaps = 3/135 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI--LQAGNLVRVNWR 59 + + IIL + E ++ + + +++YG+ + + + + I L N V + Sbjct: 3 IIKTNCIILKKKEMREADLQVTLFSKEYGKIMATAYGIRKSKKRNIVSLNPLNKVEITLL 62 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + E++++ S L + + + + +D L L+ Sbjct: 63 EKN-GYYVIKDVEIMKNFKNIPKSIEKLEISLYILDSIDKIYYMTDENGNFFDKLVEILS 121 Query: 120 CHKIPSVIGKIFVQI 134 I I K + Sbjct: 122 FIDILPYIKKGYKYY 136 >gi|50365083|ref|YP_053508.1| DNA repair/recombination protein [Mesoplasma florum L1] gi|81612911|sp|Q6F1J9|RECO_MESFL RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|50363639|gb|AAT75624.1| DNA repair/recombination protein [Mesoplasma florum L1] Length = 267 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 26/197 (13%), Positives = 51/197 (25%), Gaps = 4/197 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNWRSRLA 63 I+L +Y E + I+ V + ++G+ S + L + Sbjct: 7 RGIVLDSLNYEENDKIITVYSDEFGKLSFIALGANKASSKNNYSLNVFSESDFEIFKSRK 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL--YDMLNIFLNCH 121 + ++ S Y SI+ E + +DML + Sbjct: 67 TQSISKLKTGILVRNNFKIAKSYNNYLFASIISSVILQEELFYNKDFKLFDMLREAIRNI 126 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 V LKN G +L KC + + + E Sbjct: 127 NDEVNPFSNMVWFLFYSLKNFGGYWELNKCYRCNKASKIYRKFDLQHYGLVCPNCINENE 186 Query: 182 KMLVLPSFLWKEEQTID 198 + + + + Sbjct: 187 EEHDYEFIKYLQRMDNN 203 >gi|168335122|ref|ZP_02693230.1| DNA repair protein RecO [Epulopiscium sp. 'N.t. morphotype B'] Length = 249 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 20/185 (10%), Positives = 53/185 (28%), Gaps = 4/185 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M A+++ + GE + + + ++G+ + + + V N+ Sbjct: 1 MILSMKALVIKEFTVGEGDKYIALFGDKFGKIDVSAKGAKHYNRGLASGTQLFVYGNFSV 60 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + ++ + + L L I + + + L ++ Sbjct: 61 KKTRDTYKLLNVEIIKSFHNLRQDITTLSYASFIAEFLNEVTQENSSNKNLLTLTLYTLH 120 Query: 121 HKIPSV--IGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 I E+ +K +G+ ++ C DL ++ + A G Sbjct: 121 ELTKHRLSAKLIRFVFEMRAMKYLGYLPNVYSCTNCET--DLHYLDKHTRYAFSIEDGGL 178 Query: 179 YAEKM 183 Sbjct: 179 LCNNC 183 >gi|228470848|ref|ZP_04055695.1| hypothetical protein PORUE0001_1087 [Porphyromonas uenonis 60-3] gi|228307415|gb|EEK16425.1| hypothetical protein PORUE0001_1087 [Porphyromonas uenonis 60-3] Length = 243 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 55/152 (36%), Gaps = 5/152 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWR 59 M + ++L V Y ++++I + T +G V G+S + Q +++ Sbjct: 1 MITTVEGVVLRVIPYSDRSLIATLYTDLWGAAAFSVPIGGRSRATSNLFQPLRGLQLTTP 60 Query: 60 SRLAQNLGEFRFEVLESHC-AKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 S +Q + R L + Y L L L + L LY+++ L Sbjct: 61 SPASQPVKLIRQVQLVRGALPLAQRPAASGYFLYLAQLLRELLAQEPEDLRLYNIIVQAL 120 Query: 119 NCHKIPSVIGKIFVQIELMLLKNI---GFGLD 147 + + ++ +L+ + G+ + Sbjct: 121 DQLDRIESLEELQGFDLALLVSILRAKGYLPE 152 >gi|282892069|ref|ZP_06300546.1| hypothetical protein pah_c205o108 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498111|gb|EFB40453.1| hypothetical protein pah_c205o108 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 225 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 56/204 (27%), Gaps = 8/204 (3%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 ++ + +IL + YGE N IL V +++ G FV+ + L + R Sbjct: 3 EFKVEGLILKMLPYGEGNHILNVFSKENGLISLFVK---KQKKISHFLISPLTHAEFVLR 59 Query: 62 LAQNLGEFRFE--VLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + E L S F + L + LYD+L +L+ Sbjct: 60 PGKGELYPCEEISPLSSFLKIREKIESFEAAFHILNALTLSQYPHKSGPYLYDLLIRYLH 119 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP---KSGGAVCRSVG 176 + L L++ G C + S Sbjct: 120 EIPSSPNAQNLATSFLLKTLRHEGIFGLSEVCTTCQTLLGNTCYAYGGESYCFDHSPSHA 179 Query: 177 LPYAEKMLVLPSFLWKEEQTIDAD 200 + + L FL D Sbjct: 180 FALSPEELHSLLFLAFCRILPDIS 203 >gi|218282281|ref|ZP_03488580.1| hypothetical protein EUBIFOR_01162 [Eubacterium biforme DSM 3989] gi|218216749|gb|EEC90287.1| hypothetical protein EUBIFOR_01162 [Eubacterium biforme DSM 3989] Length = 240 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 26/243 (10%), Positives = 63/243 (25%), Gaps = 12/243 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M + A++L V Y +K+ +++V+T + R + + + Sbjct: 1 MKTKIQALVLSVSEYKDKDGLVKVLTTDS-ILTLYARGLFKQNSKNLRLVQPFSYNEFMI 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + + + L + +L+++L N Sbjct: 60 EDKTKMPLLLQGQTIRYYYHIQEDLFKSSCCFVLHDLISKTKKE---EKLFNILLDCWNS 116 Query: 121 HKIPSVIGKIF-VQIELMLLKNIGFGLDLTKCVVTGV--TQDLLWVSPKSGGAVCRSVGL 177 + + ++ G + CV + L C Sbjct: 117 ANQNLDDFYFWACIVLKYCIEQEGIQPFVDGCVHCQNMRVETLSLKDGGFLCEKCNHNQY 176 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDY---FLNKYALQHNIIHCHLLRENFLG 234 P + + + + +K F +L K+ H+ FL Sbjct: 177 PKWNVDSLKKYRALFKCKEENLAYVKEHFTFNLDDLIYLAKWVEYHSQKSYPS--IRFLE 234 Query: 235 KLL 237 + Sbjct: 235 SIR 237 >gi|238853404|ref|ZP_04643783.1| DNA repair protein RecO [Lactobacillus gasseri 202-4] gi|238833976|gb|EEQ26234.1| DNA repair protein RecO [Lactobacillus gasseri 202-4] Length = 223 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 55/169 (32%), Gaps = 2/169 (1%) Query: 25 MTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL--AQNLGEFRFEVLESHCAKLL 82 MT+ +G VR + + N + F+ ++ L Sbjct: 1 MTKDHGIFTIDVRGALRPKSRLGAATLNFSYGKYIVNTNWKGISSLRTFKDVKQLDQLYL 60 Query: 83 SSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNI 142 + Y + L E + YD++ L + I ++L LL Sbjct: 61 DLTKNAYSSYVLDLLDHAFVEYKDIGSFYDLIMKALLKINSGEDVAVITQMVQLKLLNAY 120 Query: 143 GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLW 191 G L +C++ G Q S + GG +C +++M + P + Sbjct: 121 GVAPQLDRCLICGKVQGTFDYSLELGGIICSDHFNSVSQRMHLDPKVVA 169 >gi|325281143|ref|YP_004253685.1| DNA repair protein RecO [Odoribacter splanchnicus DSM 20712] gi|324312952|gb|ADY33505.1| DNA repair protein RecO [Odoribacter splanchnicus DSM 20712] Length = 237 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 25/182 (13%), Positives = 46/182 (25%), Gaps = 2/182 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRN-GQSHRMQPILQAGNLVRVNWRSRLAQ 64 IIL Y E I+ + T++ G + + + + + + + Sbjct: 5 QGIILKTSPYSETQKIIRIYTKEKGYLSMISPSVVFKRKTKTVHLLQISEIEFFENEKSD 64 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + + + L L L EL+D L + Sbjct: 65 LHKLRQISPIINLPELYFDIFKMNILLLWGEILNLILKNEGKNEELFDYLTHSIEYLNST 124 Query: 125 SVIGKIFV-QIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKM 183 F L IGF ++ + V S A G A+ + Sbjct: 125 HNDIGNFNLYFLYRLAGFIGFRINTSSWQENYVFNINNGSFYPSDPATPYISGPNTAKII 184 Query: 184 LV 185 Sbjct: 185 YQ 186 >gi|159902937|ref|YP_001550281.1| putative recombination protein O [Prochlorococcus marinus str. MIT 9211] gi|159888113|gb|ABX08327.1| possible Recombination protein O (RecO) [Prochlorococcus marinus str. MIT 9211] Length = 266 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 20/151 (13%), Positives = 44/151 (29%), Gaps = 6/151 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRLAQ 64 + L V GE + +L +++ Q G V + + + + + Sbjct: 8 QGLSLKVGPLGENDRLLTILSAQEGIVRLAVPGARRPKSSLSATTPLTFLELQIGGKTGL 67 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + ++L+S S + +P + I L + Sbjct: 68 RR-VNQIKILKSFSKLGESLETLAAAQVIAELSILLVGANDPQPGILKAALIHLERLESK 126 Query: 125 S----VIGKIFVQIELMLLKNIGFGLDLTKC 151 +Q + LL G+ L + +C Sbjct: 127 QTGTLFTLANCIQSCVHLLALGGYNLPIQEC 157 >gi|317969068|ref|ZP_07970458.1| putative recombination protein O [Synechococcus sp. CB0205] Length = 66 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 7/54 (12%), Positives = 19/54 (35%), Gaps = 1/54 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNW 58 + ++L GE + ++ +++ + G + + P L W Sbjct: 8 EGLVLRSSPLGESDRLITLLSNEEGLIRLAAPGARKPKSSLPPLCPWRSSACRW 61 >gi|331002902|ref|ZP_08326415.1| DNA repair protein RecO [Lachnospiraceae oral taxon 107 str. F0167] gi|330413195|gb|EGG92569.1| DNA repair protein RecO [Lachnospiraceae oral taxon 107 str. F0167] Length = 214 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 46/144 (31%), Gaps = 10/144 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 I++ G+ + + + T++ G+ F R + Q R+ + Sbjct: 8 TGIVIKSMPIGDFDRRVTIFTKERGKVYAFARGARRINN----QMMGFARIFAYGKFKLF 63 Query: 66 LGEFRFEVLESHCAKLL-----SSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 G + ++ + A YG + L ++ E +E ++ L+ Sbjct: 64 EGRDSYNIVNADIANYFEEVNSDIESTCYGTYFLEMLDYYIKEALVDIESLKLIYYTLSA 123 Query: 121 H-KIPSVIGKIFVQIELMLLKNIG 143 K + EL L+ G Sbjct: 124 LTKKSIPNRLVRRIFELKLMTING 147 >gi|328955431|ref|YP_004372764.1| DNA replication and repair protein RecO [Coriobacterium glomerans PW2] gi|328455755|gb|AEB06949.1| DNA replication and repair protein RecO [Coriobacterium glomerans PW2] Length = 266 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 58/197 (29%), Gaps = 26/197 (13%) Query: 8 IILGVRSYGEKNIILEVMTRQYGR-HLGFVRNGQSH--RMQPILQAGNLVRVNWRSRLAQ 64 I+L E ++IL ++ + GR + + R+ + V + + Sbjct: 12 IVLDKTRLAETDLILTLL-AEDGRQIRAIAKGARRPGGRLAARCELACDVDLLLACGRSL 70 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 ++ ++ S + E ++ + L+ Sbjct: 71 DI-VSEARMIASPLGAAPDLPVLAAASALTEVAKLNCFEDAEDPFIFPITRCALDVAAAA 129 Query: 125 S--------------------VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVS 164 + I L+ ++G+ D T CV+ G T DL + S Sbjct: 130 GRRARSASGGVAPASDPLVAAHLDLIVAAYVFKLMSHMGYRPDCTACVLCGDT-DLTYFS 188 Query: 165 PKSGGAVCRSVGLPYAE 181 +GG +C S Sbjct: 189 AAAGGLLCSSCAASVTS 205 >gi|193216526|ref|YP_001999768.1| recombinational DNA repair protein O [Mycoplasma arthritidis 158L3-1] gi|193001849|gb|ACF07064.1| recombinational DNA repair protein O [Mycoplasma arthritidis 158L3-1] Length = 220 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 65/196 (33%), Gaps = 7/196 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M +Q AIIL + E + ILEV++ + G F + + + + L NLV + Sbjct: 1 MEFQLKAIILKKTNINEYDEILEVLS-EQGHLQVFCPSTRKPTSKNKLSLLPLNLVSLEL 59 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + + R + + A L+ S+L + + + L L D L Sbjct: 60 I-KSKYATLKPRLKRATTIKAFLVKSNLINMANDLLYFFSKI--KDTDSLILLDCYEEQL 116 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + I LL G CV G L+ GG +C Sbjct: 117 DNLDKNKDTKVL-DFILFRLLMIEGIDPKTDGCVECGRLDRLVDFQFHKGGFLCSDHSDK 175 Query: 179 YAEKMLVLPSFLWKEE 194 K + F + Sbjct: 176 LLGKSNLEALFYLSQS 191 >gi|300871806|ref|YP_003786679.1| putative DNA repair protein RecO [Brachyspira pilosicoli 95/1000] gi|300689507|gb|ADK32178.1| putative DNA repair protein, RecO [Brachyspira pilosicoli 95/1000] Length = 261 Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 34/247 (13%), Positives = 71/247 (28%), Gaps = 24/247 (9%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M +A IL +Y +II +T++ + S L++ + + +N Sbjct: 1 MIKNYEAFILSYNNYKNSSIIASFLTKKN-IISSICYQAKKNSKAFGSDLESISKLNINI 59 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + + +L + + + L S + I L + + M Sbjct: 60 YEKKSDSLSILKESNIIKNYNILEKSIYSSLAVFYIRELLLYFAKDFDERYFILMDKTLY 119 Query: 119 NCHKIPSVIGKIFVQI--------ELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 + + E+ LL G L CV+ ++ + S GG Sbjct: 120 SLEENEKQNQDNLKYYINILLRAFEIKLLYIAGLSPLLDNCVLCE-RENANYYSINEGGL 178 Query: 171 VCRSVGLPYAE------------KMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYAL 218 +C + + + K++ S L + ++ L K Sbjct: 179 ICNNCKINIKDAMELDYNDIVFMKIIKHSSMLDIVKNNDIIKFYNNSISTIRDILQKSIY 238 Query: 219 QHNIIHC 225 H Sbjct: 239 NHIHREL 245 >gi|42524457|ref|NP_969837.1| hypothetical protein Bd3065 [Bdellovibrio bacteriovorus HD100] gi|39576666|emb|CAE80830.1| hypothetical protein predicted by Glimmer/Critica [Bdellovibrio bacteriovorus HD100] Length = 186 Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 15/132 (11%), Positives = 41/132 (31%), Gaps = 6/132 (4%) Query: 14 SYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ---PILQAGNLVRVNWRSRLAQNLGE-- 68 Y E ++IL ++ Q + R + + +L+ + V + ++ + Sbjct: 2 KYSESDLILHAISTQGEKLSFMARGALKSKKRFGGGVLEPTHFVSLTYKQSAEEGKLHVL 61 Query: 69 FRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL-YDMLNIFLNCHKIPSVI 127 ++ L + + + E + E +++L L + Sbjct: 62 QEATLINDFAGLRTDYDRLELALHILECVSKVSQEGDRHSEFLFNLLGHTLRALETAQDP 121 Query: 128 GKIFVQIELMLL 139 + + L L Sbjct: 122 LIVKMHFYLKFL 133 >gi|18310996|ref|NP_562930.1| DNA repair protein RecO [Clostridium perfringens str. 13] gi|110800456|ref|YP_696694.1| DNA repair protein RecO [Clostridium perfringens ATCC 13124] gi|110803552|ref|YP_699295.1| DNA repair protein RecO [Clostridium perfringens SM101] gi|168204747|ref|ZP_02630752.1| DNA repair protein RecO [Clostridium perfringens E str. JGS1987] gi|168208716|ref|ZP_02634341.1| DNA repair protein RecO [Clostridium perfringens B str. ATCC 3626] gi|168212949|ref|ZP_02638574.1| DNA repair protein RecO [Clostridium perfringens CPE str. F4969] gi|168215641|ref|ZP_02641266.1| DNA repair protein RecO [Clostridium perfringens NCTC 8239] gi|169343745|ref|ZP_02864744.1| DNA repair protein RecO [Clostridium perfringens C str. JGS1495] gi|182624416|ref|ZP_02952200.1| DNA repair protein RecO [Clostridium perfringens D str. JGS1721] gi|119361454|sp|Q0TNU6|RECO_CLOP1 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|119361455|sp|Q0SRG2|RECO_CLOPS RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|18145678|dbj|BAB81720.1| probable DNA repair protein [Clostridium perfringens str. 13] gi|110675103|gb|ABG84090.1| DNA repair protein RecO [Clostridium perfringens ATCC 13124] gi|110684053|gb|ABG87423.1| DNA repair protein RecO [Clostridium perfringens SM101] gi|169298305|gb|EDS80395.1| DNA repair protein RecO [Clostridium perfringens C str. JGS1495] gi|170663629|gb|EDT16312.1| DNA repair protein RecO [Clostridium perfringens E str. JGS1987] gi|170713181|gb|EDT25363.1| DNA repair protein RecO [Clostridium perfringens B str. ATCC 3626] gi|170715476|gb|EDT27658.1| DNA repair protein RecO [Clostridium perfringens CPE str. F4969] gi|177910419|gb|EDT72796.1| DNA repair protein RecO [Clostridium perfringens D str. JGS1721] gi|182382418|gb|EDT79897.1| DNA repair protein RecO [Clostridium perfringens NCTC 8239] Length = 225 Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 55/191 (28%), Gaps = 4/191 (2%) Query: 21 ILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RSRLAQNLGEFRFEVLESHCA 79 +L + T + G+ + + + + L ++ + ++ S Sbjct: 1 MLWIFTEKMGKITAIAKGAKKSKSKLFSLTHPLCYGDYLLFKGKGLYRLSEGKIRTSFQT 60 Query: 80 KLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP-SVIGKIFVQIELML 138 L Y + L + E LY L + EL L Sbjct: 61 SLTDLEKLTYASYLCELIDISLQDEEENFNLYKEFITCLYLINTEAISYELLIRAFELKL 120 Query: 139 LKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTID 198 LK G+GL CV L + S E L + + + ++ Sbjct: 121 LKYTGYGLRFDNCVFC--KNKLSVSNYISLRYFGGVCDKCPKEHGLYINKATYNALRFLN 178 Query: 199 ADSLKSAFQLT 209 SL ++LT Sbjct: 179 NTSLDKVYRLT 189 >gi|148238912|ref|YP_001224299.1| DNA repair protein RecO [Synechococcus sp. WH 7803] gi|254790795|sp|A5GJ87|RECO_SYNPW RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|147847451|emb|CAK23002.1| DNA repair protein RecO [Synechococcus sp. WH 7803] Length = 270 Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 47/159 (29%), Gaps = 10/159 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRLAQ 64 + L V GE + +L +++ G V + R + + R Sbjct: 8 QGLALKVGPLGEHDRLLTLLSDDVGVVRLAVPGARRPRSSLAAAVPLTCLDLQVVGRRGL 67 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + VL S+ + +P L + + I L+ + Sbjct: 68 AR-VRQLRVLRSYSGLGQRLDTLASAQALAELAIALVSSDDPVPGLLEAVLIHLDRLERL 126 Query: 125 SV--------IGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 S VQ + LL G+GL L C +G Sbjct: 127 SRTPGEEADLCLANVVQAGVHLLALGGYGLPLQACCRSG 165 >gi|123965695|ref|YP_001010776.1| putative recombination protein O [Prochlorococcus marinus str. MIT 9515] gi|123200061|gb|ABM71669.1| possible Recombination protein O (RecO) [Prochlorococcus marinus str. MIT 9515] Length = 259 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/158 (11%), Positives = 46/158 (29%), Gaps = 9/158 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRLAQ 64 + + GE ++ V+T + G + + + + + Sbjct: 8 KGLCIKASPLGESGRLITVLTDEQGIIRLAAPGARRPKSSLAAATPLTYLSFQIFGKRSL 67 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH--- 121 + ++L+S+ + F + + + L I L+ Sbjct: 68 KS-VRQIKILKSYNGLGKNIECLAAAQAITELTFLLVGNNDKQKDYLPSLLIHLDRIYEY 126 Query: 122 ----KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + + +Q + LL G + + C TG Sbjct: 127 KIESEDDFKMLSMSIQSLIHLLAIGGINIPVNFCCSTG 164 >gi|225849886|ref|YP_002730120.1| DNA repair protein RecO [Persephonella marina EX-H1] gi|225645184|gb|ACO03370.1| DNA repair protein RecO [Persephonella marina EX-H1] Length = 231 Score = 48.7 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 50/170 (29%), Gaps = 4/170 (2%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA--GNLVRVNWR 59 ++D+AI+L GE ++ + V R++G+ ++ GQ + I N + + Sbjct: 4 IFKDEAIVLRRSFAGEYDLSVTVYFRKHGKENIYIPKGQLLKSPFITSTEQFNWFKGVFL 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 R LF R++ P +L+ L Sbjct: 64 YRKENVFIREIDSFKNLSLQIASDLDLFETAYYFSNLFNRYVI--FPDEKLFIFLKKSFY 121 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGG 169 + V L+ G L C V G + S Sbjct: 122 YLTKAKKVKNHRVNFIAKLVYLSGVFPQLDHCSVCGEVINRKNFKGVSIQ 171 >gi|308233977|ref|ZP_07664714.1| DNA repair protein RecO [Atopobium vaginae DSM 15829] gi|328944014|ref|ZP_08241479.1| hypothetical protein HMPREF0091_10704 [Atopobium vaginae DSM 15829] gi|327491983|gb|EGF23757.1| hypothetical protein HMPREF0091_10704 [Atopobium vaginae DSM 15829] Length = 258 Score = 48.7 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 26/190 (13%), Positives = 60/190 (31%), Gaps = 6/190 (3%) Query: 3 WQDDAIIL-GVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 + A+I+ EK+ IL ++ + + + ++ Sbjct: 15 IRKHALIIDHRTKLKEKDRILTLVCDDGTQRQAIAKGALKPGGRFAGVCEFAHEADFLLA 74 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRF-LPEREPCLELYDMLNIFLNC 120 +L + V L + L R+ P ++++ + L+ Sbjct: 75 EGTSLDIVQEAVSICPHKTLRELPDAFAAACVVCELARYTTFPDLPNPFMFNICSCALSL 134 Query: 121 HKIPSVIGKIFVQIELMLLKNI---GFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 + + + + K + G+ L+ C+ G D+ + S SGG++C S Sbjct: 135 CETINSYTVLLALVVAYTFKVLAHEGYRPILSSCIYCGEA-DIAYFSATSGGSICTSCAH 193 Query: 178 PYAEKMLVLP 187 + P Sbjct: 194 DIDGLSEITP 203 >gi|326576292|gb|EGE26207.1| DNA repair protein RecO [Moraxella catarrhalis CO72] Length = 269 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 28/256 (10%), Positives = 56/256 (21%), Gaps = 34/256 (13%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ-----------SHRMQPILQAGNLVR 55 +L R Y EK I + + + G G G+ S + + G + Sbjct: 8 GYLLHQRPYQEKRAIYQFFSYEKGVVHGI--GGRGMPLFTPIWLMSSGTKSLKSFGQISL 65 Query: 56 VNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + Q + L++ + L L + L PC +L+ + + Sbjct: 66 GFSDEFVRQLTAQSNEAAYHPASYGLMTGRVQYALLYMNEILDKLLATESPCPKLWQVYH 125 Query: 116 IFLNCH-----------KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV- 163 + + E L +G +D Sbjct: 126 TNMTKLHALDRLSLMAVDKMQAMKLYLRSFERGLFSELGVMMDFCVDGHGVPINADAMYC 185 Query: 164 -------SPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 + + L + + K Sbjct: 186 FIPQMGFMLAHLVRTQTDPKIRFDGICYTGSQILQMGAAMEEPELALEFLDQFSQI-QKA 244 Query: 217 ALQHNIIHCH-LLREN 231 L + + H R Sbjct: 245 VLDNLLNHQPLHSRTL 260 >gi|87125607|ref|ZP_01081452.1| Recombination protein O (RecO) [Synechococcus sp. RS9917] gi|86166907|gb|EAQ68169.1| Recombination protein O (RecO) [Synechococcus sp. RS9917] Length = 261 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 48/159 (30%), Gaps = 10/159 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRLAQ 64 +A+ L GE + +L V++ + G V + R L+ + + Sbjct: 8 EALALKAGPLGEHDRLLTVLSAETGVIRLAVPGARRPRSSLAAAVPLTLLELQVVGQRGL 67 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + V S A + +P L D + + L + Sbjct: 68 PR-LRQLRVQHSFIAVGQRLDTLAGAQALAELCIALVAGDDPIPGLLDTVLMHLERLETC 126 Query: 125 SVI--------GKIFVQIELMLLKNIGFGLDLTKCVVTG 155 S VQ + LL G+GL L C +G Sbjct: 127 SRTSAPEPGLALATTVQAAVHLLALGGYGLPLQSCCRSG 165 >gi|189219762|ref|YP_001940403.1| Recombinational DNA repair protein RecO [Methylacidiphilum infernorum V4] gi|189186620|gb|ACD83805.1| Recombinational DNA repair protein RecO [Methylacidiphilum infernorum V4] Length = 184 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 42/143 (29%), Gaps = 4/143 (2%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQA---GNLVRVNWRS 60 AI + E + I+ ++ G + + V + S Sbjct: 10 STTAIAFRKYPFSETSTIIYWISP-MGCIKTLAKGSRKSGTASFAPIDLFYECEIVFYVS 68 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 R + + +++ A L + + + ER P E + +L L Sbjct: 69 RRSDLYLLKEYRIVDPMLALRRDWVTLLCSSYFVELIAQTAEERTPLPECFILLEKALGY 128 Query: 121 HKIPSVIGKIFVQIELMLLKNIG 143 K V KI E LL G Sbjct: 129 IKKKPVSLKIVELYEKRLLAIHG 151 >gi|296113912|ref|YP_003627850.1| DNA replication and repair protein RecO [Moraxella catarrhalis RH4] gi|295921606|gb|ADG61957.1| DNA replication and repair protein RecO [Moraxella catarrhalis RH4] gi|326560589|gb|EGE10970.1| DNA repair protein RecO [Moraxella catarrhalis 103P14B1] gi|326561462|gb|EGE11812.1| DNA repair protein RecO [Moraxella catarrhalis 46P47B1] gi|326562234|gb|EGE12562.1| DNA repair protein RecO [Moraxella catarrhalis 7169] gi|326565584|gb|EGE15747.1| DNA repair protein RecO [Moraxella catarrhalis 12P80B1] gi|326567188|gb|EGE17310.1| DNA repair protein RecO [Moraxella catarrhalis BC1] gi|326568470|gb|EGE18550.1| DNA repair protein RecO [Moraxella catarrhalis BC7] gi|326572023|gb|EGE22025.1| DNA repair protein RecO [Moraxella catarrhalis BC8] gi|326573970|gb|EGE23920.1| DNA repair protein RecO [Moraxella catarrhalis O35E] gi|326574962|gb|EGE24892.1| DNA repair protein RecO [Moraxella catarrhalis 101P30B1] Length = 269 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 28/256 (10%), Positives = 56/256 (21%), Gaps = 34/256 (13%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ-----------SHRMQPILQAGNLVR 55 +L R Y EK I + + + G G G+ S + + G + Sbjct: 8 GYLLHQRPYQEKRAIYQFFSYEKGVVHGI--GGRGMPLFTPIWLMSSGTKSLKSFGQISL 65 Query: 56 VNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLN 115 + Q + L++ + L L + L PC +L+ + + Sbjct: 66 GFSDEFVRQLTAQSNEAAYHPASYGLMTGRVQYALLYMNEILDKLLATESPCPKLWQVYH 125 Query: 116 IFLNCH-----------KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV- 163 + + E L +G +D Sbjct: 126 TNMTKLHALDRLSLMAVDKMQAMKLYLRSFERGLFSELGVMMDFCVDGHGVPINADAMYC 185 Query: 164 -------SPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 + + L + + K Sbjct: 186 FIPQMGFMLAHLVRTQIDPKIRFDGVCYTGSQILQMGAAMEEPELALEFLDQFSQI-QKA 244 Query: 217 ALQHNIIHCH-LLREN 231 L + + H R Sbjct: 245 VLDNLLNHQPLHSRTL 260 >gi|116075036|ref|ZP_01472296.1| Recombination protein O (RecO) [Synechococcus sp. RS9916] gi|116067233|gb|EAU72987.1| Recombination protein O (RecO) [Synechococcus sp. RS9916] Length = 268 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 46/158 (29%), Gaps = 9/158 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRLAQ 64 + + L V GE + +L +++ Q G V + + + + R Sbjct: 7 EGLALKVGPLGEHDRLLTLLSDQVGVIRLAVPGARKPKSSLAGAVPLTQLELQVVGRRGL 66 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + V + A + + +P L D + I L + Sbjct: 67 PR-VRQLRVQHNFGAVGQRLETLAGAQALAELCMGLVEDDDPLNGLLDAVVIHLERLEAI 125 Query: 125 SVIGKIFVQIE-------LMLLKNIGFGLDLTKCVVTG 155 S + LL G+GL L C +G Sbjct: 126 SRGPDDGSLALASSVQACVHLLAIGGYGLPLQSCCRSG 163 >gi|281356997|ref|ZP_06243487.1| hypothetical protein Vvad_PD1515 [Victivallis vadensis ATCC BAA-548] gi|281316555|gb|EFB00579.1| hypothetical protein Vvad_PD1515 [Victivallis vadensis ATCC BAA-548] Length = 204 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 46/140 (32%), Gaps = 3/140 (2%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW-RSRLAQ 64 I+L + Y E ++L ++ YGR Q S + P + V + S + Sbjct: 7 IVLSKQPYKENALLLGGLSPDYGRVSLVANGAQKLSAKDFPAADLFRELEVEFDDSGNSD 66 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + E++ + L F + L + P YD L L + Sbjct: 67 LHTAKKLELIFNFDRIALKPQHFKLAGRIGGFLLKNAVPGVPQPFTYDALRSILTQLCLD 126 Query: 125 SVIGKIFVQIELMLLKNIGF 144 + + + ++ I + Sbjct: 127 DDVQGRWTMEQCSVVLKITY 146 >gi|78184233|ref|YP_376668.1| recombination protein O, RecO [Synechococcus sp. CC9902] gi|78168527|gb|ABB25624.1| DNA replication and repair protein RecO [Synechococcus sp. CC9902] Length = 257 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 51/154 (33%), Gaps = 5/154 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + + L V GE + +L +++ G V + + A + + Sbjct: 7 EGLALKVGPLGEHDRLLSLLSDAEGLTRFAVPGARRPKSSLAAAAPLTLLELQVGGRSGL 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + VL S Q++ L L +P L + + L + + Sbjct: 67 GRVRQLRVLRSFSRLGQRLETL-SAAQALCDLCLQLAADDPVNGLLSTVLLHLERLESHA 125 Query: 126 VIGKI----FVQIELMLLKNIGFGLDLTKCVVTG 155 + VQ + LL G+GL + C ++G Sbjct: 126 DDADLVLAGTVQASIHLLTLGGYGLPMQSCCLSG 159 >gi|254431445|ref|ZP_05045148.1| DNA repair protein RecO [Cyanobium sp. PCC 7001] gi|197625898|gb|EDY38457.1| DNA repair protein RecO [Cyanobium sp. PCC 7001] Length = 264 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 45/162 (27%), Gaps = 9/162 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRLAQ 64 + + L R GE + +L +++ + G V + R +R+ R Sbjct: 7 EGLALSCRPLGESDRLLTLLSEEDGLTRLAVPGARKPRSSLAAAVPLAHLRLQVGGRSGL 66 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 V + +P P + + + L + Sbjct: 67 RRVRQLRVVRN-YSQLAERLETLAAAQALAELCLGLVPGDAPAPGMLGSMLMQLGRLEQQ 125 Query: 125 SVIGKIFVQIE-------LMLLKNIGFGLDLTKCVVTGVTQD 159 ++ + LL G+ L L +C TG D Sbjct: 126 VRERSDSLEALALAVQGSVHLLALGGYALPLVQCSRTGQRLD 167 >gi|296327609|ref|ZP_06870153.1| recombination protein O [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296155255|gb|EFG96028.1| recombination protein O [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 48 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 6/46 (13%), Positives = 19/46 (41%), Gaps = 1/46 (2%) Query: 1 MYW-QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ 45 M + + II+ + E + + + YG+ ++ + + + Sbjct: 1 MIFLRGKGIIIAKKDIEEADRYITIFMEDYGKVSTVIKGIRKSKKR 46 >gi|33860955|ref|NP_892516.1| putative recombination protein O [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33639687|emb|CAE18857.1| possible Recombination protein O (RecO) [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 259 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 17/158 (10%), Positives = 46/158 (29%), Gaps = 9/158 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRLAQ 64 + + GE ++ V+T + G + + + + + Sbjct: 8 KGLCIKASPLGESGRLITVLTDEQGIIRLAAPGARRPKSSLAAATPLTYLSFQIFGKRSL 67 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH--- 121 + ++L+S+ + F + + + + I L+ Sbjct: 68 KS-VRQIKILKSYNGLGKNIECLAAAQAITELTFLLVGNNDKQKDYLSSVLIHLDRIYEY 126 Query: 122 ----KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 + + + +Q + LL G + + C TG Sbjct: 127 NLESEEDFKMLSMSIQSLIHLLAIGGINIPVNFCCKTG 164 >gi|146328642|ref|YP_001210012.1| hypothetical protein DNO_1128 [Dichelobacter nodosus VCS1703A] gi|146232112|gb|ABQ13090.1| hypothetical protein DNO_1128 [Dichelobacter nodosus VCS1703A] Length = 229 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 38/144 (26%), Gaps = 7/144 (4%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 A IL Y + +L++ + G + + + ++ L Sbjct: 12 AFILKRTPYQDNKYLLDLFCQNLGLIRAVGSVSRYKNYRDTQSFAPFQEIVINGKIKNEL 71 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 L H A L + F LY+ L Sbjct: 72 ATIWNSELRHHYA--PKGKNILAAHYLNELMLYFSHSISRPQTLYEHYKTQLIHL----- 124 Query: 127 IGKIFVQIELMLLKNIGFGLDLTK 150 + Q+E ++ +G ++ + Sbjct: 125 RAENLRQLEWYFIEELGLFPEIKQ 148 >gi|291279474|ref|YP_003496309.1| hypothetical protein DEFDS_1084 [Deferribacter desulfuricans SSM1] gi|290754176|dbj|BAI80553.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 227 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 67/205 (32%), Gaps = 14/205 (6%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 + +AII + +Y +K+ I V ++ YG F+ + S + + + + + Sbjct: 3 RVKTEAIIYKLINYADKSAIGYVFSKDYGLIKVFISSAFSKK--GGVFKFLPGIMELKYK 60 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 L ++ L + L L + L L + Sbjct: 61 ENGLLHKYYGFEQNVSYNYFLDNPYILMRLNLLFFLIDEYGIENNE------YVWKLILN 114 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 I K FV I +LK G ++ +C+ G +L S + G + Sbjct: 115 IREENIYKSFVYITYYILKGSGVFPEI-QCLECGAKSNLYLCSDLAVR-----CGKCTDD 168 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAF 206 K + + L+K ++ F Sbjct: 169 KKYYITNELFKIFSKLNNKEKYKIF 193 >gi|116071122|ref|ZP_01468391.1| Recombination protein O, RecO [Synechococcus sp. BL107] gi|116066527|gb|EAU72284.1| Recombination protein O, RecO [Synechococcus sp. BL107] Length = 257 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 51/154 (33%), Gaps = 5/154 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + + L V GE + +L +++ G V + + A + + Sbjct: 7 EGLALKVGPLGEHDRLLSLLSDAEGLTRFAVPGARRPKSSLAAAAPLTLLELQVGGRSGL 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + VL S Q++ L L +P L + + L + + Sbjct: 67 GRVRQLRVLRSFSRLGQRLETL-SAAQALCDLCLQLAADDPVNGLLSTVLLHLERLESHA 125 Query: 126 VIGKI----FVQIELMLLKNIGFGLDLTKCVVTG 155 + VQ + LL G+GL + C ++G Sbjct: 126 DDADLVLAGTVQASIHLLTLGGYGLPMQTCCLSG 159 >gi|330444171|ref|YP_004377157.1| DNA repair protein RecO [Chlamydophila pecorum E58] gi|328807281|gb|AEB41454.1| DNA repair protein RecO [Chlamydophila pecorum E58] Length = 246 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 57/179 (31%), Gaps = 5/179 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNW 58 M I+L +G+ ++++ + + G F + G S + LQ Sbjct: 1 MRTFTSGIVLQNTPFGKNHLLVTLFSPG-GLLKFFAKQGLSLNCTYRDALQPLVFGNYTL 59 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 R A+ EV S SL G + I + +P EL+ +L FL Sbjct: 60 RGSSAKTRTLIEGEVRYDFPELKQSYSLLHAGGKMIQAVLSSQWNEKPSPELFSLLFNFL 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLT-KCVVTGVTQDLLWVSPKSGGAVCRSVG 176 L LL+ G LDL+ C + G +C+ Sbjct: 120 YRLHKSQNPDFFAAIFLLKLLQYEGI-LDLSPSCSLCNTPLIDTTCYRYQGQKLCKKHA 177 >gi|229827514|ref|ZP_04453583.1| hypothetical protein GCWU000182_02903 [Abiotrophia defectiva ATCC 49176] gi|229788452|gb|EEP24566.1| hypothetical protein GCWU000182_02903 [Abiotrophia defectiva ATCC 49176] Length = 207 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 25/193 (12%), Positives = 57/193 (29%), Gaps = 5/193 (2%) Query: 14 SYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEV 73 GE + + ++T + GR F R + + + L ++ +N Sbjct: 2 PIGEYDKRVVIITAELGRIHAFARGARRTNSKLLAGTDPLTFGTFKLISGKNAYTLVEVK 61 Query: 74 LESHCAKL-LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV---IGK 129 + ++ +L YG + F E L +++ + + Sbjct: 62 IVNYFNELKTDIDRVYYGFYFLELASYFSRENIGEKNLINLIYMAFKALEAKVDKLTPEF 121 Query: 130 IFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG-LPYAEKMLVLPS 188 I E + + G + + + G V AV + + Sbjct: 122 IKAIFEWKIFQIEGIMPSIDEGIFLGKKLKPSTVYAIKMIAVTDITKLFSFDLEAESKRE 181 Query: 189 FLWKEEQTIDADS 201 F+ E+ D ++ Sbjct: 182 FIKLAEEYRDLNT 194 >gi|78213532|ref|YP_382311.1| DNA replication and repair protein RecO [Synechococcus sp. CC9605] gi|123577709|sp|Q3AI26|RECO_SYNSC RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|78197991|gb|ABB35756.1| DNA repair protein RecO [Synechococcus sp. CC9605] Length = 257 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 51/155 (32%), Gaps = 5/155 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + L V GE + +L +++ G V + R A + + Sbjct: 7 TGLALKVGPLGEHDRLLSLLSNAEGVSRFAVPGARRPRSSLAAAAPLTLLELQVGGRSGL 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + VL S Q++ L L +P L D + + L + Sbjct: 67 ARVRQLRVLRSFSGLGQQLETL-AAAQALCDLCIQLAAEDPVEGLLDTMQLHLERLEEHR 125 Query: 126 VIGKI----FVQIELMLLKNIGFGLDLTKCVVTGV 156 ++ VQ + LL G+GL L C +TG Sbjct: 126 ADPELVLAGTVQACIHLLTLGGYGLPLQTCCITGD 160 >gi|71894681|ref|YP_278789.1| hypothetical protein MS53_0671 [Mycoplasma synoviae 53] gi|71851469|gb|AAZ44078.1| conserved hypothetical protein [Mycoplasma synoviae 53] Length = 226 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 31/219 (14%), Positives = 68/219 (31%), Gaps = 9/219 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M I+L ++ + E I+ + + G F + + + L G +V + + Sbjct: 1 MSDFTTGIVLKIKKHSENEFIVYFLCAK-GVLKLFAMGLEKPTSKNKTNLVIGAIVEIEY 59 Query: 59 R-SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIF 117 +RL +G + S + Q ++ LF + L +Y + Sbjct: 60 FKARLKNKIGRLKTVKTLLFPVYNFKSLEEYFEFQKLIKLFLTINFENNFLSVYKFMLEK 119 Query: 118 LNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 L LL N G + C + +L+ + + GG C Sbjct: 120 LKYIN----YEYAMTYFYGQLLINYGVCPNFKSCAICMQESNLVSFNLEEGGFFCNKHSD 175 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 + + + ++ ++ + + FL Sbjct: 176 GIEILNVEVLNLIYLSYNNF-ILYVQKTNKYVNDFLQNK 213 >gi|269115111|ref|YP_003302874.1| hypothetical protein MHO_3360 [Mycoplasma hominis] gi|268322736|emb|CAX37471.1| Conserved hypothetical protein [Mycoplasma hominis ATCC 23114] Length = 223 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 56/175 (32%), Gaps = 4/175 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRS 60 M ++ I++ ++ E + I+ ++T G F + L VN Sbjct: 1 MEFELSGIVINKQNVNEFDEIISLLT-NKGIQRIFCPGVNKTNSKNGPSILILNLVNCEV 59 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 ++ S + L + F L + L L+ Sbjct: 60 IKSETRNLLPRLKTASLIKNFPTDYRLLNIANDLKTFFNCLD-NCNNINLIKEYEHCLDF 118 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 S K+ + +++ ++GF +L C+ ++++ GG +C Sbjct: 119 ILSKSD--KVEAYLLFLVVSSLGFKPNLNSCIECNNVENIVDFKLYKGGFLCSMH 171 >gi|33865199|ref|NP_896758.1| recombination protein O (RecO) [Synechococcus sp. WH 8102] gi|81572940|sp|Q7TTW6|RECO_SYNPX RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|33638883|emb|CAE07180.1| possible Recombination protein O (RecO) [Synechococcus sp. WH 8102] Length = 268 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 46/153 (30%), Gaps = 5/153 (3%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 + L V GE + +L +++ G V + + A + + Sbjct: 8 GLALKVGPLGEHDRLLSLLSDAEGVTRLAVPGARRPKSSLAAAAPLTLLELQVGGRSGLA 67 Query: 67 GEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 + VL SH Q+ L + +P L L + L S Sbjct: 68 RVRQLRVLHSHAGLGRQLETL-SAAQAFCDLCLQIGREDPVEGLLATLQLHLERLDQRSD 126 Query: 127 IGKIFVQI----ELMLLKNIGFGLDLTKCVVTG 155 + + LL G+ L L C ++G Sbjct: 127 CLDELLASSVQGAIHLLTLGGYSLPLQSCCLSG 159 >gi|294101757|ref|YP_003553615.1| DNA repair protein RecO [Aminobacterium colombiense DSM 12261] gi|293616737|gb|ADE56891.1| DNA repair protein RecO [Aminobacterium colombiense DSM 12261] Length = 242 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 49/155 (31%), Gaps = 1/155 (0%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SR 61 ++ ++L R E +I L + + G R + L ++ + Sbjct: 9 FRSSGVVLRRRISAEGDISLHLFLKGVGPVWVQAPGSARGRGRFGGATEPLTWGSFNLYK 68 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 ++L +V + L L+ + R+ ++ +L + Sbjct: 69 GPKHLYLKTIDVKDDMWTLRLDPEKLHSALEWNRMVSRYTCSGVAEDDVLILLYWTMRSL 128 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 + + ++ L G DL+KC GV Sbjct: 129 CEGANPLFLSWRLLWRWLYIRGEAPDLSKCEQCGV 163 >gi|225387779|ref|ZP_03757543.1| hypothetical protein CLOSTASPAR_01549 [Clostridium asparagiforme DSM 15981] gi|225046113|gb|EEG56359.1| hypothetical protein CLOSTASPAR_01549 [Clostridium asparagiforme DSM 15981] Length = 217 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 44/139 (31%), Gaps = 2/139 (1%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNL 66 ++L GE + L ++T G+ F + + V + + Sbjct: 9 GMVLLSAPSGEFDRRLVLLTTGRGKITAFAHGARRPGNPLMACTRTFVFGKFTLYEGRTA 68 Query: 67 GEFRFEVLESHCAKLLSSSL-FLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + ++ +L S YG + + E E +L L P+ Sbjct: 69 YNLQSAQVANYFDELSSDMEGACYGSYFLELADFYSQENMDATEQLKLLYQSLRALLKPA 128 Query: 126 VIGKI-FVQIELMLLKNIG 143 + ++ EL ++ G Sbjct: 129 IPNRLVRRIFELKMMVING 147 >gi|88809275|ref|ZP_01124784.1| Recombination protein O (RecO) [Synechococcus sp. WH 7805] gi|88787217|gb|EAR18375.1| Recombination protein O (RecO) [Synechococcus sp. WH 7805] Length = 270 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 10/161 (6%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRLAQ 64 + L V GE + +L +++ G V + R + + R Sbjct: 8 QGLALKVGPLGEHDRLLTLLSDDVGVIRLAVPGARRPRSSLAAAVPLTCLDLQVVGRRGL 67 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI- 123 + +V S+ + +P L D + I L Sbjct: 68 AR-VRQLQVQRSYSGLGQRLDTLAAAQALAELAIALVSSDDPVPGLLDAVLIHLERLDNL 126 Query: 124 -------PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 VQ + LL G+GL L C +G T Sbjct: 127 SRAPGEKVDHCLAHVVQAGVHLLALGGYGLPLQACCRSGAT 167 >gi|87301170|ref|ZP_01084011.1| Recombination protein O (RecO) [Synechococcus sp. WH 5701] gi|87284138|gb|EAQ76091.1| Recombination protein O (RecO) [Synechococcus sp. WH 5701] Length = 275 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 48/158 (30%), Gaps = 9/158 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRLAQ 64 + + L GE + +L +++ G V + R + +R+ Sbjct: 7 EGLSLKCGPLGEHDRLLTLLSEDGGLSRLAVPGARRPRSSLAAAVPLSQLRLQVGG-GRG 65 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + V+ S R +P+ + L + L ++ Sbjct: 66 LRRVRQLRVIHSFGQLGQRLETLAAAQSLAELCLRLVPDGDGVAGALGDLTLQLRRLELV 125 Query: 125 SVIGKIFVQI-------ELMLLKNIGFGLDLTKCVVTG 155 + ++ + LL G+GL L +C +G Sbjct: 126 VSERQDNLEALAIAVQGHVHLLALGGYGLPLQRCARSG 163 >gi|260435082|ref|ZP_05789052.1| DNA repair protein RecO [Synechococcus sp. WH 8109] gi|260412956|gb|EEX06252.1| DNA repair protein RecO [Synechococcus sp. WH 8109] Length = 257 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 18/150 (12%), Positives = 37/150 (24%), Gaps = 3/150 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + L V GE + +L +++ G V + + A + + Sbjct: 7 TGLALKVGPLGEHDRLLSLLSDAEGVSRFAVPGARRPKSSLAAAAPLTLLELQVGGRSGL 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + VL S + + L M + + Sbjct: 67 ARVRQLRVLRSFSGLGQQLETLAAAQALCDLCLQLAAQDPVDGLLDTMQLHLERLEEHRA 126 Query: 126 VIGKIFVQIELMLLKNI---GFGLDLTKCV 152 + + + G+GL L C Sbjct: 127 DPELVLAGTVQACIHLLTLGGYGLPLQTCC 156 >gi|332296317|ref|YP_004438240.1| hypothetical protein Thena_1497 [Thermodesulfobium narugense DSM 14796] gi|332179420|gb|AEE15109.1| hypothetical protein Thena_1497 [Thermodesulfobium narugense DSM 14796] Length = 178 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 15/134 (11%), Positives = 38/134 (28%), Gaps = 3/134 (2%) Query: 8 IILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLG 67 I L E + I++++T G +R + + ++ ++ G L+ V + + Sbjct: 6 IFLKSYPIKENSFIVKILTDSEGSLPALLRGSKKNILRKLIFPGTLMDVELVKTKGEIMI 65 Query: 68 EFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPER---EPCLELYDMLNIFLNCHKIP 124 + ++ S S+ L I+ ++ Sbjct: 66 LNEYRIIRSPNISSFRQSILLSSYLDIIDKIARGHFESVQRVYTNIFFEDETQFKDLDWF 125 Query: 125 SVIGKIFVQIELML 138 K + Sbjct: 126 IRCLKEEFYYAGFM 139 >gi|240047737|ref|YP_002961125.1| hypothetical protein MCJ_006270 [Mycoplasma conjunctivae HRC/581] gi|239985309|emb|CAT05322.1| HYPOTHETICAL PROTEIN MCJ_006270 [Mycoplasma conjunctivae] Length = 224 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 18/173 (10%), Positives = 41/173 (23%), Gaps = 5/173 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 I++ + Y E + I+++ T + + + + L+ Sbjct: 7 KGIVIYSQDYKENDQIIKIATPEK-IISFIAVGVRKPNSKNRSSLVLATYGEYEIFLS-- 63 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + L+ Y + + + E++ L N + Sbjct: 64 YHVNKLSKLKKGYFIKNLDFQKEYVIIFWNLISKIWKT-SYHGEIFSFLVEAYNIIDNEN 122 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + L G +L C Q L G Sbjct: 123 YLAIYIYLLLKW-LGLEGLVANLNSCFYCNNNQRLSHFEFDKGMQCILHENRK 174 >gi|255994491|ref|ZP_05427626.1| DNA repair protein RecO [Eubacterium saphenum ATCC 49989] gi|255993204|gb|EEU03293.1| DNA repair protein RecO [Eubacterium saphenum ATCC 49989] Length = 256 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 25/210 (11%), Positives = 66/210 (31%), Gaps = 7/210 (3%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61 ++ +AI+L ++ ++TR + L S + + + ++ + Sbjct: 3 EFEIEAIVLRCIKMTGGRNLVTLLTRDDKKILASAYGSGSSKGGDANILQPMSKSIFQIK 62 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + + ++++ + +I + +PE Y+ L+ FL+ Sbjct: 63 QNRYYNVLKVDLIDYPMEIASDIEKLAVAMFAIEITDKVIPENSGEHGAYNHLSSFLDAA 122 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKS-------GGAVCRS 174 + IF + + + + V + + S KS A Sbjct: 123 RRRESEYAIFPIYYFIKILTMTGVFVINNEVFLDAANESCYFSLKSGKTYETYKKAKTEI 182 Query: 175 VGLPYAEKMLVLPSFLWKEEQTIDADSLKS 204 G Y +L + S + + + + Sbjct: 183 GGGYYDSLILKVSSDIINTVRYLANADISK 212 >gi|42525952|ref|NP_971050.1| recombination protein O [Treponema denticola ATCC 35405] gi|41816002|gb|AAS10931.1| Recombination protein O [Treponema denticola ATCC 35405] Length = 269 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 25/190 (13%), Positives = 58/190 (30%), Gaps = 8/190 (4%) Query: 3 WQDDAIILGVRSYGE---KNIILEVMTRQY-GRHLGFVRNGQSHRMQPILQAGNLVRVNW 58 W +A++L ++++GE ++L T V G +++ ++ + V Sbjct: 6 WSSEALVLSLKTFGEGHRNALLLLPYTEHSCQLVDAAVFGGPKSKLRSMVIPYHTGEVWI 65 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 S +N + + + L + ++ L L + Sbjct: 66 YSNPIKNSNKISDFKVSDYRIGLSDNLTRIWCAAFAAELAVKLKGNI--DWQIINSFLTG 123 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + K ++ ++ G D+ C G+ + P++ Sbjct: 124 IAVSSENECRKALLRFLWRVISLSGLAPDMEHCCRCGIR--VSSKMPETDYLNKSVSAFS 181 Query: 179 YAEKMLVLPS 188 YAEK Sbjct: 182 YAEKNFFFVP 191 >gi|218295529|ref|ZP_03496342.1| DNA repair protein RecO [Thermus aquaticus Y51MC23] gi|218244161|gb|EED10687.1| DNA repair protein RecO [Thermus aquaticus Y51MC23] Length = 221 Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 45/145 (31%), Gaps = 4/145 (2%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRLA 63 ++ I++G + + ++++ +T + G R GQ + L + VR ++ Sbjct: 7 EEGIVVGRKPLAQGDLLVRFLTPK-GSLEAVARKGQRPTGRTGRLSLFHHVRFQLYAKEE 65 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + E++ L + L L E +Y + L Sbjct: 66 GLPTLTQAELIGRLHG--LEEPRRFLLASFLAELAYRLASPEAAPRIYPVFVSGLRGIAK 123 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDL 148 V LK G +L Sbjct: 124 HKEPLLPLVWAGWRALKAGGLSPNL 148 >gi|229824095|ref|ZP_04450164.1| hypothetical protein GCWU000282_01399 [Catonella morbi ATCC 51271] gi|229786449|gb|EEP22563.1| hypothetical protein GCWU000282_01399 [Catonella morbi ATCC 51271] Length = 200 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 33/115 (28%) Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + ++ A L YG+ + + L + + ++Y +L L Sbjct: 13 EGLSFLKESQPIQLFQALQQDMLLQAYGIYVLQLVDAALEDNQANPKVYQLLLQVLEALN 72 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGL 177 I +E+ LL G + C L S K +C Sbjct: 73 QGLTAQVIVAYLEIHLLPIFGIHIQWASCATCQTNDRPLRFSLKRQAVLCDRHAF 127 >gi|296125227|ref|YP_003632479.1| DNA repair protein RecO [Brachyspira murdochii DSM 12563] gi|296017043|gb|ADG70280.1| DNA repair protein RecO [Brachyspira murdochii DSM 12563] Length = 262 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 29/252 (11%), Positives = 65/252 (25%), Gaps = 29/252 (11%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ--SHRMQPILQAGNLVRVNW 58 M A IL Y +II +T + S L++ + + +N Sbjct: 1 MIKNTQAFILSYNQYKTSSIIASFLTNNS-IIQAICYKAKKSSKSFGSDLESISKLNINI 59 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + L + + + + L S + I + + M Sbjct: 60 YEKKQPQLSILKESSITKNYSSLEKSIYSSLLVFYIREVLLYCARDFDERYFILMEKSLN 119 Query: 119 NCHKI-------------PSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP 165 ++ I + E+ L G L +C++ + + S Sbjct: 120 ALEELEEAESLKDDDKIKKMYINILMRAFEMKTLHIAGISPHLDRCILCE-NNNASFYSI 178 Query: 166 KSGGAVCRSVGLPYAEKMLVLPS--FLWKEEQTIDADSLKSAFQL----------TDYFL 213 GG +C + + + + + ++ + + Sbjct: 179 TEGGLICSKCKAIIKDAFEITEDDKNFMRIIKHTSLIDIVNSKNIINLYNNSIGNVRDIM 238 Query: 214 NKYALQHNIIHC 225 NK H + Sbjct: 239 NKSLFYHINRNI 250 >gi|229495820|ref|ZP_04389548.1| DNA repair protein RecO [Porphyromonas endodontalis ATCC 35406] gi|229317394|gb|EEN83299.1| DNA repair protein RecO [Porphyromonas endodontalis ATCC 35406] Length = 248 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 52/157 (33%), Gaps = 11/157 (7%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFV--------RNGQSHRMQPILQAGN 52 M AI+L R+Y +K I ++T + G + R+ + R+Q ++ + Sbjct: 1 MLISTRAIVLTTRAYNDKFAIAHLLTEEEGMVAYKIPKPSPSNRRSSATARLQRMVHPLS 60 Query: 53 LVRVNWRSRLAQNLGEFR--FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLEL 110 + + RL + L + S L L+ L P E+ Sbjct: 61 ELSIVADHRLQRGLQQIDDAEYYRLSLNLMLYDQIKVNIAYFLAEALYHILRSAPPDPEV 120 Query: 111 YDMLNIFLNCHKIPSV-IGKIFVQIELMLLKNIGFGL 146 Y ++ + + + LL+ +G Sbjct: 121 YRYISRSIETLEESEKSCANFPITFLFGLLEPLGVLP 157 >gi|320536666|ref|ZP_08036681.1| DNA repair protein RecO [Treponema phagedenis F0421] gi|320146488|gb|EFW38089.1| DNA repair protein RecO [Treponema phagedenis F0421] Length = 253 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 19/196 (9%), Positives = 53/196 (27%), Gaps = 7/196 (3%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGF---VRNGQSHRMQPILQAGNLVRVNWRS 60 +A++L + +GE + ++ + ++ + G + + + V S Sbjct: 7 TAEALVLSLGEFGEGHRMVRLFIKEDTTCSLLHAALYGGAKSKARSSIAPYQTGTVWLYS 66 Query: 61 RLAQNLGEFRFEVLESH-CAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 +N + S+ + S + + L + + Sbjct: 67 NPIKNTHSITDFAITSYRFSIRESLVRLWSAA--LCAELIDATKGNISWVLVNAFLDGIE 124 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 + + +LL G ++ C + L + + L Sbjct: 125 NLPDNECKVALIRFLWRVLLGE-GIAPEIDCCAACRKSFTDLLANEYFYYHTHEELCLCS 183 Query: 180 AEKMLVLPSFLWKEEQ 195 + + F +E Sbjct: 184 SCSDISQSGFQLSKEA 199 >gi|162447801|ref|YP_001620933.1| DNA repair protein [Acholeplasma laidlawii PG-8A] gi|161985908|gb|ABX81557.1| DNA repair protein [Acholeplasma laidlawii PG-8A] Length = 215 Score = 44.4 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 67/203 (33%), Gaps = 10/203 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + I+ +SY E + +L V T+ GR + Q A L + ++ +N Sbjct: 2 EGIVYKQQSYLENDRLLFVYTK-LGRITLVAKGSQKMTSNIRNVAQYLNLIYFKEVPNKN 60 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + + + S + + L F+ + + +Y +L L + S Sbjct: 61 MYALVEGKTLNDFQNIKSDFDLMTQASILFDLLGFVSDNDDHESIYTLLEGALLHYSKES 120 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 ++ LL+ +G+ + L ++ S + + +LV Sbjct: 121 ILSFG-----FKLLRYLGYQISLKPDGRRVKGVNIKTASIVYEKEPYVANIDVHQTTLLV 175 Query: 186 LPSFL----WKEEQTIDADSLKS 204 ++L I+ LK Sbjct: 176 RLTYLDYDKIDTIDEINYRELKE 198 >gi|269303466|gb|ACZ33566.1| DNA repair protein RecO [Chlamydophila pneumoniae LPCoLN] Length = 252 Score = 44.4 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 27/206 (13%), Positives = 61/206 (29%), Gaps = 3/206 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNW 58 M ++L R G+ + + + T + G F + GQ+ + + L +L + Sbjct: 1 MQICVTGVVLRSRPLGKNHTLTTLFTPE-GLFTFFAKQGQTLQCDYRETLVPISLGKYTL 59 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 ++ ++L + A + +L + I L + +P +L+ + FL Sbjct: 60 HRNGSRLPKLTHGDILNAFEAIKQTYALLEASGKMIQALLASQWKEKPSHKLFSLFLNFL 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + + L LL+ G C + + + + Sbjct: 120 HRIPESNNPEFFAAIFVLKLLQYEGILDLTPACSLCKASLPYACYRYQGHKLCKKHQHKQ 179 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKS 204 L L + Sbjct: 180 AISIEKEEEQILQAIIHAKQFSELLA 205 >gi|167950039|ref|ZP_02537113.1| DNA repair protein RecO [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 137 Score = 44.4 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 25/72 (34%) Query: 86 LFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFG 145 G L R L +P +L+ + L + + EL LL +G+G Sbjct: 1 HLYCGFYLNELLTRLLQREDPHPQLFLHYSNTLAALATAEPMEAVLRHFELELLDELGYG 60 Query: 146 LDLTKCVVTGVT 157 L L + G Sbjct: 61 LLLDQEADNGDK 72 >gi|227874498|ref|ZP_03992670.1| conserved hypothetical protein [Oribacterium sinus F0268] gi|227839642|gb|EEJ50100.1| conserved hypothetical protein [Oribacterium sinus F0268] Length = 216 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 17/140 (12%), Positives = 46/140 (32%), Gaps = 2/140 (1%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 ++L S E + L+++T + G+ + + + + + V + R + Sbjct: 8 HGVVLSEHSLREFDKRLQLLTMERGKMTVWASGAKRPNSPLLAGSRSFVFGKFHLREGKA 67 Query: 66 LGEFRFEVLESHCAKL-LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 R ++++ ++ Y + E ++ ++L + L Sbjct: 68 GYTLRSVEVDAYFEEIAKDLEKACYAAYFLELAELVAQENLEAPQMVELLYLSLKALLHK 127 Query: 125 S-VIGKIFVQIELMLLKNIG 143 + EL +L G Sbjct: 128 GLKNELVRRIFELRMLMLEG 147 >gi|15618499|ref|NP_224785.1| DNA repair protein RecO [Chlamydophila pneumoniae CWL029] gi|15836121|ref|NP_300645.1| DNA repair protein RecO [Chlamydophila pneumoniae J138] gi|16752449|ref|NP_444711.1| DNA repair protein RecO [Chlamydophila pneumoniae AR39] gi|33241944|ref|NP_876885.1| DNA repair protein RecO [Chlamydophila pneumoniae TW-183] gi|20139865|sp|Q9Z7W5|RECO_CHLPN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|4376883|gb|AAD18728.1| CT470 hypothetical protein [Chlamydophila pneumoniae CWL029] gi|7189094|gb|AAF38039.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39] gi|8978961|dbj|BAA98796.1| CT470 hypothetical protein [Chlamydophila pneumoniae J138] gi|33236454|gb|AAP98542.1| hypothetical protein CpB0613 [Chlamydophila pneumoniae TW-183] Length = 252 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 28/206 (13%), Positives = 61/206 (29%), Gaps = 3/206 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNW 58 M ++L R G+ + + + T + G F + GQ+ + + L +L + Sbjct: 1 MQICVTGVVLRSRPLGKNHTLTTLFTPE-GLFTFFAKQGQTLQCDYRETLVPISLGKYTL 59 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 ++ ++L + A + +L + I L + +P +L+ + FL Sbjct: 60 HRNGSRLPKLTHGDILNAFEAIKQTYALLEASGKMIQALLASQWKEKPSHKLFSLFLNFL 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + S L LL+ G C + + + + Sbjct: 120 HRIPESSNPEFFAAIFVLKLLQYEGILDLTPACSLCKASLPYACYRYQGHKLCKKHQHKQ 179 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKS 204 L L + Sbjct: 180 AISIEKEEEQILQAIIHAKQFSELLA 205 >gi|315022236|gb|EFT35264.1| DNA recombination and repair protein RecO [Riemerella anatipestifer RA-YM] gi|325336636|gb|ADZ12910.1| RecO [Riemerella anatipestifer RA-GD] Length = 225 Score = 44.0 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 26/201 (12%), Positives = 53/201 (26%), Gaps = 7/201 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG--QSHRMQPILQAGNLVRVNWRS-RL 62 IL Y + +L V+ R+ G FV+N ++ + L V N + Sbjct: 5 QGFILSYTKYNDSGAVLRVLEREAGIQSYFVKNIYLARNKQKVYLMPLMGVDFNVSKTKS 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + E + + + +P LY + F + Sbjct: 65 GALPLVNQISLSEISKMIDFTLVNNAQMTLLAEFILKTVPYEVVEDSLYQCVEDFYINME 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEK 182 + ++KNIG+G T+ + + + Sbjct: 125 NK----NSLIFSIYSIIKNIGYGFLFTEGAFFDLKNGCFQEIENEFTVNRTLSDILKNIE 180 Query: 183 MLVLPSFLWKEEQTIDADSLK 203 L + D + Sbjct: 181 NLTFIKTPIDASERRDIIDIL 201 >gi|257456471|ref|ZP_05621667.1| recombination protein O [Treponema vincentii ATCC 35580] gi|257446131|gb|EEV21178.1| recombination protein O [Treponema vincentii ATCC 35580] Length = 283 Score = 44.0 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 56/156 (35%), Gaps = 5/156 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMT-RQYG--RHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 W +A++L V S+ + + ++ +++G + G +++ ++ A +V Sbjct: 6 WNTEALVLSVSSFNSDHRNVSLLVPQEHGCTIVPATLFGGARSKLRGMVAAYQSGKVWLY 65 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 S +N + + ++ +L S + ++ +L + L Sbjct: 66 SNPIKNSNKITDFSVSAYRMELRESLARSWCA-AVCSEITIKTCGTVNWQLVNAFLDGL- 123 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTG 155 C + ++ LL+ G D+ C G Sbjct: 124 CVSDDEGCERGLLRFLWRLLQTAGVAPDIFHCGFCG 159 >gi|213029338|ref|ZP_03343785.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 121 Score = 44.0 bits (102), Expect = 0.018, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 36/114 (31%), Gaps = 1/114 (0%) Query: 102 PEREPCLELYDMLNIFLNCHKIPS-VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDL 160 EL+ + + + EL LL ++G+G++ T C +G D Sbjct: 1 EYETRFSELFFDYLNCIQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGERVDD 60 Query: 161 LWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLN 214 + + + + D D+L++A + T L Sbjct: 61 TMTYRYREEKGFFASVVIDNNTFTGRHLKALEAREFPDVDTLRAAKRFTRMALK 114 >gi|291060006|gb|ADD72741.1| DNA repair protein RecO [Treponema pallidum subsp. pallidum str. Chicago] Length = 254 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 19/155 (12%), Positives = 49/155 (31%), Gaps = 5/155 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTR---QYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 W A++L + ++GE + + + R + + G +++ ++ RV W Sbjct: 6 WYAQALVLSLSAFGEGHKSVTLFVRLQDEAFILRAALFGGAQSKLRGLVIPYTTGRV-WV 64 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + +H L S+ +I + L ++ Sbjct: 65 YSNPRTSMHKIVDFSVTHSRVALRDSIVRVWCAAICVDIIEASKGTISWTLVTAFLDGIS 124 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT 154 + + + +L+ G ++T C Sbjct: 125 LSSDGACKHALLRFLWRVLIGE-GVAPNITSCSRC 158 >gi|15639623|ref|NP_219073.1| hypothetical protein TP0636 [Treponema pallidum subsp. pallidum str. Nichols] gi|189025861|ref|YP_001933633.1| hypothetical protein TPASS_0636 [Treponema pallidum subsp. pallidum SS14] gi|3322934|gb|AAC65610.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum str. Nichols] gi|189018436|gb|ACD71054.1| hypothetical protein TPASS_0636 [Treponema pallidum subsp. pallidum SS14] Length = 256 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 19/155 (12%), Positives = 49/155 (31%), Gaps = 5/155 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTR---QYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR 59 W A++L + ++GE + + + R + + G +++ ++ RV W Sbjct: 8 WYAQALVLSLSAFGEGHKSVTLFVRLQDEAFILRAALFGGAQSKLRGLVIPYTTGRV-WV 66 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + +H L S+ +I + L ++ Sbjct: 67 YSNPRTSMHKIVDFSVTHSRVALRDSIVRVWCAAICVDIIEASKGTISWTLVTAFLDGIS 126 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVT 154 + + + +L+ G ++T C Sbjct: 127 LSSDGACKHALLRFLWRVLIGE-GVAPNITSCSRC 160 >gi|289523168|ref|ZP_06440022.1| DNA repair protein RecO [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503711|gb|EFD24875.1| DNA repair protein RecO [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 234 Score = 43.6 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 48/152 (31%), Gaps = 1/152 (0%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW-RSRLAQ 64 ++L E +I L + R +G R + L+ ++ + + Sbjct: 9 TGVVLKRHETSEGDIRLYNLFRDFGPQWILAPGAARGRRRFGGATEPLIWGHFSCYKSPK 68 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 L EV E H + + L ++L +PC E+ + L + Sbjct: 69 QLYLRDIEVKEDHWNIRSNPDKLERAMIWANLLTKYLLPLQPCNEVMAVFYDSLCLLEGD 128 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 I + +K G +L +C G Sbjct: 129 IDESMIEWRFLYRWMKKWGLAPELIRCASCGK 160 >gi|255348843|ref|ZP_05380850.1| DNA repair protein RecO [Chlamydia trachomatis 70] gi|255503383|ref|ZP_05381773.1| DNA repair protein RecO [Chlamydia trachomatis 70s] gi|255507061|ref|ZP_05382700.1| DNA repair protein RecO [Chlamydia trachomatis D(s)2923] gi|289525515|emb|CBJ14992.1| DNA repair protein [Chlamydia trachomatis Sweden2] gi|296435071|gb|ADH17249.1| DNA repair protein RecO [Chlamydia trachomatis E/150] gi|296438791|gb|ADH20944.1| DNA repair protein RecO [Chlamydia trachomatis E/11023] Length = 248 Score = 43.3 bits (100), Expect = 0.027, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 58/179 (32%), Gaps = 5/179 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNW 58 M ++L ++++I+++ + G F +NG S + L + Sbjct: 1 MQITLPGVVLTNSPAEKQHVIVKIFSPA-GLLSAFAKNGASLSCDFRESLFPISFSLFTI 59 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + + + E+ S L + I + + +P L+ + FL Sbjct: 60 QQSPPKMRKVIQGELQNPFTTIKSSYPLLQSAGKMIQAILKTQWHEKPSPHLFSLFLNFL 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTK-CVVTGVTQDLLWVSPKSGGAVCRSVG 176 L LL++ G LDL++ C + + + + G C Sbjct: 120 QRIPETQYPNFFSSMFLLKLLQHEG-SLDLSRSCTLCKTSLESSTIYRYEGALFCEKHA 177 >gi|313205924|ref|YP_004045101.1| hypothetical protein Riean_0426 [Riemerella anatipestifer DSM 15868] gi|312445240|gb|ADQ81595.1| hypothetical protein Riean_0426 [Riemerella anatipestifer DSM 15868] Length = 225 Score = 43.3 bits (100), Expect = 0.030, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 46/157 (29%), Gaps = 7/157 (4%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNG--QSHRMQPILQAGNLVRVNWRS-RL 62 IL Y + +L V+ R+ G FV+N ++ + L V N + Sbjct: 5 QGFILSYTKYNDSGAVLRVLEREAGIQSYFVKNIYLARNKQKVYLMPLMGVDFNVSKTKS 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 + + E + + + +P LY + F Sbjct: 65 GALPLVNQISLSEISKMIDFTLVNNAQMTLLAEFILKTVPYEVVEDSLYQCVEDFYINID 124 Query: 123 IPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQD 159 + ++KNIG+G T+ + Sbjct: 125 NK----NSLIFTIYSIIKNIGYGFLFTEGAFFDLKNG 157 >gi|116327965|ref|YP_797685.1| recombinational DNA repair protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330846|ref|YP_800564.1| recombinational DNA repair protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120709|gb|ABJ78752.1| Recombinational DNA repair protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124535|gb|ABJ75806.1| Recombinational DNA repair protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 260 Score = 42.9 bits (99), Expect = 0.034, Method: Composition-based stats. Identities = 35/246 (14%), Positives = 78/246 (31%), Gaps = 27/246 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRH-LGFVRNGQSHRMQPI--LQAGNLVRVNWRS-R 61 I+L R+ E + ++ ++ + G+ VR + + +PI ++ G+L +++ + Sbjct: 13 RGIVLESRTIQEGDALIRLL-PEIGQVENFRVRGIRKSKTRPIASVEPGSLSDLDYYHSK 71 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + ++ + + + F P+ + +L+ L Sbjct: 72 NKETYNVKEISLINRFDKAKSGYFAAVLVSYLVELVSSFTPDGAEHPGEFRLLSGALEEL 131 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 + G I +L LL + GF C G + SV L + Sbjct: 132 EKNGPSGLILPFFKLRLLVSGGFLSKELVCHSCG-----------TELKKMVSVILQTSP 180 Query: 182 KMLVLPSFLWKEEQTIDADSLKSAFQL--TDYFLNKYALQHNIIHC---------HLLRE 230 L+ + L + + F + + NI+ +LR+ Sbjct: 181 FELICGNCLHGDRNDLGLAQWIQTFLIFRFRDLKERKISVENILGLDRICNEMLEPILRK 240 Query: 231 NFLGKL 236 L Sbjct: 241 KLKSAL 246 >gi|308190060|ref|YP_003922991.1| recombinational DNA repair protein O [Mycoplasma fermentans JER] gi|319777354|ref|YP_004137005.1| DNA repair protein reco [Mycoplasma fermentans M64] gi|238809530|dbj|BAH69320.1| hypothetical protein [Mycoplasma fermentans PG18] gi|307624802|gb|ADN69107.1| recombinational DNA repair protein O [Mycoplasma fermentans JER] gi|318038429|gb|ADV34628.1| DNA repair protein recO [Mycoplasma fermentans M64] Length = 226 Score = 42.9 bits (99), Expect = 0.035, Method: Composition-based stats. Identities = 21/165 (12%), Positives = 53/165 (32%), Gaps = 13/165 (7%) Query: 16 GEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRS---RLAQNLGEFR 70 + + I++V ++ G + + + LQ G+LV + + +L + Sbjct: 19 SDNDAIVQVYSKN-GIFSLLAKGVNKSESKNRVNLQIGSLVEIEYFQARLNNKVSLLKKA 77 Query: 71 FEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIGKI 130 + + + + + + + P L++ LN + Sbjct: 78 TLISDIDYSNRFNLIFIQKAVNLLKHFPK------PYYTLFETYVNCLNYL-GLGKNSML 130 Query: 131 FVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV 175 + + L G +++ KC +L GG +C + Sbjct: 131 YTYLLAHTLNYFGLDVNVNKCCECNSPSNLCDFKFYKGGFLCGNH 175 >gi|282858169|ref|ZP_06267364.1| DNA repair protein RecO [Pyramidobacter piscolens W5455] gi|282584091|gb|EFB89464.1| DNA repair protein RecO [Pyramidobacter piscolens W5455] Length = 247 Score = 42.9 bits (99), Expect = 0.037, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 47/156 (30%), Gaps = 3/156 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWR-SR 61 + ++L +Y E +I + + G + +V M+ V +++ + Sbjct: 26 IKRTGVVLRRGNYMEGDIAALLFLKSGGTNWVYVPGASKGSMRFGGALEPFVWGHYQLYQ 85 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + EV E A + ++ L R L P +L + L Sbjct: 86 SKRKTYLKEIEVTEDFWALRRHPRAVIQAVRWAKMLERHLIPGYPYDDLLALFYWALKAL 145 Query: 122 KIPSVIGKIFVQIEL-MLLKNIGFGLDLTKCVVTGV 156 + + LL G DL C G Sbjct: 146 SEGVAPELLDARFLWRWLLSW-GIAPDLRSCGSCGK 180 >gi|166154684|ref|YP_001654802.1| DNA repair protein RecO [Chlamydia trachomatis 434/Bu] gi|166155559|ref|YP_001653814.1| DNA repair protein RecO [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335954|ref|ZP_07224198.1| DNA repair protein RecO [Chlamydia trachomatis L2tet1] gi|238687387|sp|B0B843|RECO_CHLT2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|238687486|sp|B0BCA8|RECO_CHLTB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|165930672|emb|CAP04169.1| DNA repair protein [Chlamydia trachomatis 434/Bu] gi|165931547|emb|CAP07123.1| DNA repair protein [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 243 Score = 42.9 bits (99), Expect = 0.039, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 58/179 (32%), Gaps = 5/179 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNW 58 M ++L ++++I+++ + G F +NG S + L + Sbjct: 1 MQITLPGVVLTNSPAEKQHVIVKIFSPA-GLLSAFAKNGASLSCDFRESLFPISFSLFTI 59 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + + + E+ S L + I + + +P L+ + FL Sbjct: 60 QQSPPKMRKVIQGELQNPFTTIKSSYPLLQSAGKMIQAILKTQWHEKPSPHLFSLFFNFL 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTK-CVVTGVTQDLLWVSPKSGGAVCRSVG 176 L LL++ G LDL++ C + + + + G C Sbjct: 120 QRIPETQYPNFFSSMFLLKLLQHEG-SLDLSRSCTLCKTSLESSTIYRYEGALFCEKHA 177 >gi|237755372|ref|ZP_04584000.1| hypothetical protein SULYE_0030 [Sulfurihydrogenibium yellowstonense SS-5] gi|237692456|gb|EEP61436.1| hypothetical protein SULYE_0030 [Sulfurihydrogenibium yellowstonense SS-5] Length = 198 Score = 42.5 bits (98), Expect = 0.054, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 64/194 (32%), Gaps = 9/194 (4%) Query: 2 YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI--LQAGNLVRVNWR 59 ++D+AI+L + GEK++ + V T++ G+ +++NGQ + P L + Sbjct: 4 IYKDEAIVLNRKFVGEKDLTITVYTKKSGKESIYIQNGQYLKNMPYSILSPFCWFKAVLI 63 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + + + F G I ++ P + E +L Sbjct: 64 KIKDKLIISEIDSYKQIGYYISQDIEKFEAGFNIINFTYKLAPHQ---DERIFILLKKSL 120 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 S + K+ + L+ + + LDL + + + K Sbjct: 121 YFLTISKLPKLLEILFLLKITYLNGELDLKRL----DLNNKEFDFLKGLMEKSIKEASQL 176 Query: 180 AEKMLVLPSFLWKE 193 + + L + Sbjct: 177 EIENVEFLESLRSK 190 >gi|293390946|ref|ZP_06635280.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951480|gb|EFE01599.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans D7S-1] Length = 98 Score = 42.1 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 6/95 (6%) Query: 139 LKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTID 198 ++ +G+G+D T C +G T + + + +++ Q D Sbjct: 1 MRTLGYGIDFTHCAGSGNTVEADMTYRYREEKGFIASLIKDNLTFYGRELLAFEQTQFDD 60 Query: 199 ADSLKSAFQLTDYFLNKYALQHNIIHCH-LLRENF 232 L +A + T + AL+ + RE F Sbjct: 61 PSILLAAKRFT-----RIALKPYLGDKPLKSRELF 90 >gi|15828630|ref|NP_325990.1| hypothetical protein MYPU_1590 [Mycoplasma pulmonis UAB CTIP] gi|14089572|emb|CAC13332.1| unknown; predicted coding region [Mycoplasma pulmonis] Length = 228 Score = 41.7 bits (96), Expect = 0.075, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 63/192 (32%), Gaps = 15/192 (7%) Query: 6 DAIILGVRSYGEKNIILEVM----TRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWR 59 I+L V+ Y E ++IL+V+ T + + + + L G++V + Sbjct: 7 KGILLSVKDYSEHDVILKVLFIDSTE-----AILAKGIRKIESKNRSNLMVGSIVEFIYF 61 Query: 60 SRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN 119 + R + +S + Q I L + E + + Sbjct: 62 -KARLETKISRLKKATLIQLFDFTSVQNQFLFQRIFHFINQLTK---IDEYFFQSYSDIL 117 Query: 120 CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPY 179 ++ I + +K++G + + C G ++ V GG +C + L Sbjct: 118 NYQKKDCNSHIITFLYFRTMKSLGIEPNFSSCYRCGSFAQIVNVKVHEGGFLCSNCSLKR 177 Query: 180 AEKMLVLPSFLW 191 ++ + Sbjct: 178 KPIRMLKNFYYL 189 >gi|325475699|gb|EGC78875.1| recombination protein O [Treponema denticola F0402] Length = 271 Score = 41.7 bits (96), Expect = 0.095, Method: Composition-based stats. Identities = 18/158 (11%), Positives = 48/158 (30%), Gaps = 6/158 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYG----RHLGFVRNGQSHRMQPILQAGNLVRVNW 58 W +A++L ++++GE + ++ V G +++ ++ + V Sbjct: 6 WSSEALVLSLKTFGEGHRNALLLLPDTEHSCKLVDAAVFGGPKSKLRSMVIPYHTGEVWI 65 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 S +N + + + L + ++ L L + Sbjct: 66 YSNPIKNSNKISDFKVSDYRIGLSDNLTRIWCAAFAAELAVKLKGNI--DWQIINSFLTG 123 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGV 156 S ++ ++ G D+ C G+ Sbjct: 124 IAVSSESECRTALLRFLWRVISLSGLAPDMEHCCRCGI 161 >gi|113955067|ref|YP_729822.1| DNA repair protein RecO [Synechococcus sp. CC9311] gi|123132694|sp|Q0ICK0|RECO_SYNS3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|113882418|gb|ABI47376.1| DNA repair protein RecO [Synechococcus sp. CC9311] Length = 271 Score = 41.3 bits (95), Expect = 0.098, Method: Composition-based stats. Identities = 20/167 (11%), Positives = 43/167 (25%), Gaps = 17/167 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 + + L V GE + +L +++ G V + R + Sbjct: 8 EGLALKVGPLGEHDRLLTLLSDDVGLIRLAVPGARKPRSSLAAAVPLTTMELQVGGRSGL 67 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 L + V + + +P + + + L ++ + Sbjct: 68 LRVRQLRVQHNFGNVGQRLETLAAAQALSELSISLVAGDDPVPGMLSAVLMHLERLELLA 127 Query: 126 VIGKIFVQ-----------------IELMLLKNIGFGLDLTKCVVTG 155 + + LL G+GL L C +G Sbjct: 128 QKQRSSEMKSAEGERVDRTLATLVQACVHLLALGGYGLPLQTCCRSG 174 >gi|218264664|ref|ZP_03478427.1| hypothetical protein PRABACTJOHN_04134 [Parabacteroides johnsonii DSM 18315] gi|218221851|gb|EEC94501.1| hypothetical protein PRABACTJOHN_04134 [Parabacteroides johnsonii DSM 18315] Length = 218 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 51/146 (34%), Gaps = 5/146 (3%) Query: 24 VMTRQYGRHLGFV---RNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAK 80 + T +GR V R +S + + ++V + ++L R L + Sbjct: 1 MYTEAFGRASYLVARSRGKKSSVSKALFMPLSVVEMEVEHLNKRDLHRIRETKLCYPLTE 60 Query: 81 LLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK-IPSVIGKIFVQIELML 138 + + + L LFR + E EP L++ L+ + + + + L L Sbjct: 61 VFCNPVKNVLALFLSEVLFRVVKETEPDPHLFEYLSESIQLLELSDKGVANFHLVFLLRL 120 Query: 139 LKNIGFGLDLTKCVVTGVTQDLLWVS 164 L +G ++ V L V Sbjct: 121 LHYLGIYPNVESYVTGSCFDMLNGVF 146 >gi|188996541|ref|YP_001930792.1| hypothetical protein SYO3AOP1_0600 [Sulfurihydrogenibium sp. YO3AOP1] gi|188931608|gb|ACD66238.1| hypothetical protein SYO3AOP1_0600 [Sulfurihydrogenibium sp. YO3AOP1] Length = 198 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 57/150 (38%), Gaps = 5/150 (3%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPI--LQAGNLVRVNWRS 60 ++D+AI+L + GEK++ + V T++ G+ +++NGQ + P L + Sbjct: 5 YKDEAIVLNRKFVGEKDLTITVYTKKSGKESIYIQNGQYLKNMPYSILSPFCWFKAVLIK 64 Query: 61 RLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNC 120 + + + F G I ++ P + E +L Sbjct: 65 IKDKLIISEIDSYKQIGYYISQDIEKFEAGFNIINFTYKLAPHQ---DEKIFILLKKSLY 121 Query: 121 HKIPSVIGKIFVQIELMLLKNIGFGLDLTK 150 S + K+ + L+ + + LDL + Sbjct: 122 FLTISKLPKLLEILFLLKITYLNGELDLKR 151 >gi|256838956|ref|ZP_05544466.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256739875|gb|EEU53199.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 232 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 44/128 (34%), Gaps = 4/128 (3%) Query: 11 GVRSYGEKNIILEVMTRQYGRHLGFV---RNGQSHRMQPILQAGNLVRVNWRSRLAQNLG 67 Y +K I+ + T +GR V R +S + + +++ + ++L Sbjct: 2 HTIPYNDKYSIIYMYTEAFGRASYLVSRSRGKKSTVSKALFIPLSVLEMEVEHLNKRDLH 61 Query: 68 EFRFEVLESHCAKLLSSSLFL-YGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSV 126 + + + + L LFR + + EP L+D L ++ + Sbjct: 62 RIKETRICFPLNDVCCDPVKNVLALFLSEVLFRVVKDTEPDPRLFDYLYESIHLLEYADK 121 Query: 127 IGKIFVQI 134 F + Sbjct: 122 GIANFHMV 129 >gi|124023836|ref|YP_001018143.1| recombination protein O [Prochlorococcus marinus str. MIT 9303] gi|254764655|sp|A2CBL8|RECO_PROM3 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|123964122|gb|ABM78878.1| possible Recombination protein O (RecO) [Prochlorococcus marinus str. MIT 9303] Length = 267 Score = 40.2 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 48/158 (30%), Gaps = 10/158 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRLAQN 65 + L V GE + +L +++ Q G V + R +L+ + R Sbjct: 9 GLSLKVGPLGEHDRLLTLLSDQEGVTRLAVPGARRPRSSLAAAVPLSLLELQVAGRRGLA 68 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + +VL S + + +P L + L + L + S Sbjct: 69 R-VRQLKVLRSFNSVGKQLETLAAAQALAELSLMLVAGNDPLPGLLNTLLMHLERLEALS 127 Query: 126 VIGKIFVQIE--------LMLLKNIGFGLDLTKCVVTG 155 + LL G+GL + +C G Sbjct: 128 QAQPAQPNTTLACSVQACVHLLALGGYGLPVQECCRNG 165 >gi|33862484|ref|NP_894044.1| putative recombination protein O [Prochlorococcus marinus str. MIT 9313] gi|81577968|sp|Q7V8W2|RECO_PROMM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|33640597|emb|CAE20386.1| Recombination protein O (RecO) [Prochlorococcus marinus str. MIT 9313] Length = 267 Score = 39.8 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 48/158 (30%), Gaps = 10/158 (6%) Query: 7 AIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRLAQN 65 + L V GE + +L +++ Q G V + R +L+ + R Sbjct: 9 GLSLKVGPLGEHDRLLTLLSDQEGVTRLAVPGARRPRSSLAAAVPLSLLELQVAGRRGLA 68 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + +VL S + + +P L + L + L + S Sbjct: 69 R-VRQLKVLRSFNSVGKQLETLAAAQALAELSLMLVAGNDPLPGLLNTLLMHLERLEALS 127 Query: 126 VIGKIFVQIE--------LMLLKNIGFGLDLTKCVVTG 155 + LL G+GL + +C G Sbjct: 128 QAQPAQPNTTLACSVQACVHLLALGGYGLPVQECCRNG 165 >gi|169824434|ref|YP_001692045.1| putative recombinational DNA repair protein [Finegoldia magna ATCC 29328] gi|302380701|ref|ZP_07269166.1| DNA repair protein RecO [Finegoldia magna ACS-171-V-Col3] gi|167831239|dbj|BAG08155.1| putative recombinational DNA repair protein [Finegoldia magna ATCC 29328] gi|302311644|gb|EFK93660.1| DNA repair protein RecO [Finegoldia magna ACS-171-V-Col3] Length = 234 Score = 39.8 bits (91), Expect = 0.31, Method: Composition-based stats. Identities = 25/208 (12%), Positives = 65/208 (31%), Gaps = 5/208 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 + AI+L YGE +IIL V +++ G F+ N S + ++ + Sbjct: 6 IKTQAIVLEHIVYGENSIILNVFSKEEGIIGIFINNINSMKSIIEFNVLSVNDFTL-KKG 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 Q ++++ S+ + L+ L + + ++Y ++ + Sbjct: 65 NQFYYLVDYDLINSNFNIRTNYRSELFSLVIVDLIKSIFYNEVCNEKVYALILKTVIFLS 124 Query: 123 IPSVIGK-IFVQIELMLLKNIGFGLDL---TKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 S + L L+ +G+ + + + + Sbjct: 125 KYSEDQYALINAFILKLVSYLGYQPSMFYQNSHNRFYLDGGFVDSDGEYYQIDNLHAKYM 184 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAF 206 + K+ ++I+ + + Sbjct: 185 IYLMKNRYDDIINKKYESINENEILKIL 212 >gi|320450470|ref|YP_004202566.1| DNA repair protein RecO [Thermus scotoductus SA-01] gi|320150639|gb|ADW22017.1| DNA repair protein RecO [Thermus scotoductus SA-01] Length = 231 Score = 39.8 bits (91), Expect = 0.32, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 44/145 (30%), Gaps = 4/145 (2%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVR-NGQSHRMQPILQAGNLVRVNWRSRLA 63 ++ I++G ++ + +++L +T + G R + L + VR ++ Sbjct: 8 EEGIVVGRKALLQGDLLLRFLTPK-GSLEAVARKGVRPSGRSGRLSLFHHVRFQLYTKGE 66 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + E+L L + L L E +Y + L Sbjct: 67 GLPTLTQAELLGRLHG--LEEPRRFLLASFLAELSYRLASPEAAPRIYPVFISGLRGIAK 124 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDL 148 V ++K G L Sbjct: 125 HPRPLLPLVWAGWRVVKAGGLSPHL 149 >gi|303233749|ref|ZP_07320403.1| DNA repair protein RecO [Finegoldia magna BVS033A4] gi|302495183|gb|EFL54935.1| DNA repair protein RecO [Finegoldia magna BVS033A4] Length = 234 Score = 39.8 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 25/208 (12%), Positives = 65/208 (31%), Gaps = 5/208 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 + AI+L YGE +IIL V +++ G F+ N S + ++ + Sbjct: 6 IKTQAIVLEHIVYGENSIILNVFSKEEGIIGIFINNINSMKSIIEFNVLSVNDFTL-KKG 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 Q ++++ S+ + L+ L + + ++Y ++ + Sbjct: 65 NQFYYLVDYDLINSNFNIRTNYRSELFSLVIVDLIKSIFYNEVCNEKVYALILKTVIFLS 124 Query: 123 IPSVIGK-IFVQIELMLLKNIGFGLDL---TKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 S + L L+ +G+ + + + + Sbjct: 125 KYSEDQYALINAFILKLVSYLGYQPSMFYKNSHNRFYLDGGFVDSDGEYYQIDNLHAKYM 184 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAF 206 + K+ ++I+ + + Sbjct: 185 IYLMKNRYDDIINKKYESINENEILKIL 212 >gi|297566139|ref|YP_003685111.1| DNA repair protein RecO [Meiothermus silvanus DSM 9946] gi|296850588|gb|ADH63603.1| DNA repair protein RecO [Meiothermus silvanus DSM 9946] Length = 222 Score = 39.8 bits (91), Expect = 0.34, Method: Composition-based stats. Identities = 20/146 (13%), Positives = 44/146 (30%), Gaps = 3/146 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRLAQ 64 + +++G + ++IL +T + G R + L + +R + Sbjct: 8 EGLLIGRKPLPGGDVILSFVTPE-GAMQAVARKAMRPTGRSGRLSLFHHLRFQVYQKPGN 66 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 +L L L F Y FR ++ +L L Sbjct: 67 DLPTLTQAELVGRLEGLEIPPRFAYASYLGELAFRLASPEVAS-RIWPILISGLRGIAKH 125 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTK 150 + + V +L+ G +++ Sbjct: 126 ANPKVVLVWAGWRVLRAAGLQPNMSG 151 >gi|15835369|ref|NP_297128.1| DNA repair protein RecO [Chlamydia muridarum Nigg] gi|270285545|ref|ZP_06194939.1| DNA repair protein RecO [Chlamydia muridarum Nigg] gi|270289556|ref|ZP_06195858.1| DNA repair protein RecO [Chlamydia muridarum Weiss] gi|301336942|ref|ZP_07225144.1| DNA repair protein RecO [Chlamydia muridarum MopnTet14] gi|20139826|sp|Q9PJS3|RECO_CHLMU RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|7190780|gb|AAF39559.1| conserved hypothetical protein [Chlamydia muridarum Nigg] Length = 234 Score = 39.8 bits (91), Expect = 0.35, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 58/179 (32%), Gaps = 5/179 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNW 58 M I+L ++++I ++ + G F +NG S + L + Sbjct: 1 MQIILPGIVLTHSPAEKQHVIAKIFSPA-GLLSAFAKNGASLSCDFRESLLPISFSLFTI 59 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + + + E+ S L + I + + + +P +L+ + FL Sbjct: 60 QHTPPKMRKVLQGELKNPFTTIKNSYRLLQSTGKMIQAILKTQWQEKPSPQLFSLFLNFL 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTK-CVVTGVTQDLLWVSPKSGGAVCRSVG 176 L LL++ G LDL+ C + + + V G C Sbjct: 120 QRIPETPHPYFFSSMFLLKLLQHEG-SLDLSHSCTLCKSSLESSTVYRHEGSLFCEKHA 177 >gi|297588413|ref|ZP_06947056.1| recombination protein O [Finegoldia magna ATCC 53516] gi|297573786|gb|EFH92507.1| recombination protein O [Finegoldia magna ATCC 53516] Length = 234 Score = 39.4 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 25/208 (12%), Positives = 65/208 (31%), Gaps = 5/208 (2%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRL 62 + AI+L YGE +IIL V +++ G F+ N S + ++ + Sbjct: 6 IKTQAIVLEHIIYGENSIILNVFSKEEGIIGIFINNINSMKSIIEFNVLSVNDFTL-KKG 64 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK 122 Q ++++ S+ + L+ L + + ++Y ++ + Sbjct: 65 NQFYYLVDYDLINSNFNIRTNYKSELFSLVIVDLIKSIFYNEVCNEKVYALILKTVIFLS 124 Query: 123 IPSVIGK-IFVQIELMLLKNIGFGLDL---TKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 S + L L+ +G+ + + + + Sbjct: 125 KYSDNQYALINAFILKLVSYLGYQPSMFYENSHNRFYLDGGFVDSDGEYYQIDNLHAKYM 184 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAF 206 + K+ ++I+ + + Sbjct: 185 IYLMKNRYDDIVNKKFESINENEILKIL 212 >gi|160940877|ref|ZP_02088217.1| hypothetical protein CLOBOL_05769 [Clostridium bolteae ATCC BAA-613] gi|158436121|gb|EDP13888.1| hypothetical protein CLOBOL_05769 [Clostridium bolteae ATCC BAA-613] Length = 60 Score = 39.4 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 8/53 (15%), Positives = 20/53 (37%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNW 58 ++L G+ + L ++TR+ G+ F + + + N+ Sbjct: 8 TGMVLLSAPSGDFDRRLVLLTRERGKITAFSHGARKPGNPLMAASRPFCFGNF 60 >gi|241889814|ref|ZP_04777112.1| DNA repair protein RecO [Gemella haemolysans ATCC 10379] gi|241863436|gb|EER67820.1| DNA repair protein RecO [Gemella haemolysans ATCC 10379] Length = 240 Score = 39.4 bits (90), Expect = 0.46, Method: Composition-based stats. Identities = 28/199 (14%), Positives = 61/199 (30%), Gaps = 4/199 (2%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 II+ Y + + IL V+T Q F N + + + V +N+ + Sbjct: 8 TGIIIKKIRYRDYHEILHVLTEQGNIESFFYENVHKSKKKIKVSTPYEVSINFFP-TSGM 66 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 E+ ++ + Y + + + +Y +L + L + Sbjct: 67 NKITNLEIENTYTNIVYDILKNSYVANMLEYVN---LINDDIFNMYKLLKVCLKNIENDV 123 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 + + +LK GF K V L S + SV + + Sbjct: 124 SEKLVLIYFLCQILKGQGFMFKYQKTDQPYVGYSFLKNSFVDKFNIDHSVYGLSDSLVKL 183 Query: 186 LPSFLWKEEQTIDADSLKS 204 K +++ +++ Sbjct: 184 TYYMTVKNIDFLESLEIEN 202 >gi|154491917|ref|ZP_02031543.1| hypothetical protein PARMER_01545 [Parabacteroides merdae ATCC 43184] gi|154088158|gb|EDN87203.1| hypothetical protein PARMER_01545 [Parabacteroides merdae ATCC 43184] Length = 218 Score = 39.4 bits (90), Expect = 0.47, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 48/146 (32%), Gaps = 5/146 (3%) Query: 24 VMTRQYGRHLGFV---RNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEVLE-SHCA 79 + T +GR V R +S + + ++V + ++L R L Sbjct: 1 MYTEAFGRASYLVARSRGKKSSVSKALFMPLSVVEMEVEHLNKRDLHRIRETKLCYPLTD 60 Query: 80 KLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHK-IPSVIGKIFVQIELML 138 + + L LFR + E EP L++ L + + + + L L Sbjct: 61 VFCNPVKNILALFLSEILFRVVKETEPDSRLFEYLFESIQLLELSDKGVANFHLVFLLRL 120 Query: 139 LKNIGFGLDLTKCVVTGVTQDLLWVS 164 L +G ++ V L V Sbjct: 121 LHYLGIYPNVESYVAGSCFDMLNGVF 146 >gi|313673514|ref|YP_004051625.1| hypothetical protein Calni_1554 [Calditerrivibrio nitroreducens DSM 19672] gi|312940270|gb|ADR19462.1| hypothetical protein Calni_1554 [Calditerrivibrio nitroreducens DSM 19672] Length = 221 Score = 39.0 bits (89), Expect = 0.55, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 39/131 (29%), Gaps = 2/131 (1%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQ 64 II + Y +++ I T Q GR FV N +Q + + + Sbjct: 6 TKGIIYRIIKYSDRSAICFGFTEQRGRLKFFVSNAFGKNR--TIQKIFPAEITYIYKDNT 63 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 +L + + + + + L I + L L+ + LN Sbjct: 64 DLHKITAIEYLTGYSFFQTETPLYLRLNLIFEIIEDLFPLGSNLDELWRYLMGLNRENYI 123 Query: 125 SVIGKIFVQIE 135 + I I Sbjct: 124 KGVAYILFYIL 134 >gi|29839920|ref|NP_829026.1| DNA repair protein RecO [Chlamydophila caviae GPIC] gi|29834267|gb|AAP04904.1| conserved hypothetical protein [Chlamydophila caviae GPIC] Length = 235 Score = 39.0 bits (89), Expect = 0.62, Method: Composition-based stats. Identities = 33/236 (13%), Positives = 63/236 (26%), Gaps = 11/236 (4%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M+ AI L G+ + + + + G F + GQS + L +L + Sbjct: 1 MHTLTPAIALQNLPLGKNHCVTTIFSP-LGLLTFFAKQGQSIYCDFREALIPLSLGIYSL 59 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + EV S SL + + + +P EL+ + FL Sbjct: 60 DYSPPKMRKLICAEVKNPFSEIKSSLSLLQAAGKMAQSILESQWQEKPSQELFSLFLNFL 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSV--- 175 + L LL+ G + C T G C Sbjct: 120 HRLPESKNPEMFAAAFLLKLLQYEGILDLSSTCAHCKKTISSPNFYRYQGRKFCLEHRPE 179 Query: 176 -GLPYAEKMLVLPSFLWKEEQTIDADSLKSA-FQLTDY---FLNKYALQHNIIHCH 226 + + + L ++ D L + + ++ + Sbjct: 180 NAVMIENEEEQILCALIHAKRFQDLLHLSNFHLEFSEKITLIFESTIHEGKNKKLP 235 >gi|313892325|ref|ZP_07825917.1| DNA repair protein RecO [Dialister microaerophilus UPII 345-E] gi|313119184|gb|EFR42384.1| DNA repair protein RecO [Dialister microaerophilus UPII 345-E] Length = 217 Score = 38.6 bits (88), Expect = 0.70, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 47/166 (28%), Gaps = 1/166 (0%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ-SHRMQPILQAGNLVRVNWRSRLAQ 64 + I+L + G N I+ + T+ YG FV +L +R + Sbjct: 11 EGILLHSKEAGNGNRIVFIFTKNYGNQTAFVSQSTIKSFGSGLLMPFTYLRCSMAETSFD 70 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 ++E S + I + P E + Y L L Sbjct: 71 KWTLIQYEGKNICDISKFSYEDWCRWCFVIEIIKWGFPLGEKDINAYIRLVKCLKGILDK 130 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGA 170 + ++ ML C + ++ +L + K Sbjct: 131 NKQVSAYITALQMLYAAGYDASAQEMCELYNLSDELKTLLQKFINY 176 >gi|225848520|ref|YP_002728683.1| hypothetical protein SULAZ_0698 [Sulfurihydrogenibium azorense Az-Fu1] gi|225643278|gb|ACN98328.1| hypothetical protein SULAZ_0698 [Sulfurihydrogenibium azorense Az-Fu1] Length = 198 Score = 38.6 bits (88), Expect = 0.70, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 71/191 (37%), Gaps = 3/191 (1%) Query: 3 WQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVN-WRSR 61 ++D AI+L GEK++ L V T++ GR F++NGQ + P++ + + Sbjct: 5 FKDQAIVLKRTFVGEKDLSLVVYTKKLGRESIFIQNGQLIKNLPVVSLTEFNWFSGVFFK 64 Query: 62 LAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCH 121 + L + ++ +++ +I+ + ++ +L L Sbjct: 65 IKDRLYISEIDNFKNVAIEIVKEYNRFLSAYNIISWIYNFAPHQ-DERIFILLKKTLYYL 123 Query: 122 KIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAE 181 + + + + L+ + L+L + +DLL K+ + S+ + Sbjct: 124 TLAKDTNLLELAFLVRLV-YLNGELNLNAIDLDTQERDLLTFLLKTPISKISSLLGEENQ 182 Query: 182 KMLVLPSFLWK 192 L L Sbjct: 183 NPQKLKEKLLS 193 >gi|257460870|ref|ZP_05625971.1| acyl-CoA thioester hydrolase [Campylobacter gracilis RM3268] gi|257442201|gb|EEV17343.1| acyl-CoA thioester hydrolase [Campylobacter gracilis RM3268] Length = 204 Score = 38.3 bits (87), Expect = 0.87, Method: Composition-based stats. Identities = 18/167 (10%), Positives = 48/167 (28%), Gaps = 18/167 (10%) Query: 6 DAIILGVRSYGEKNIILEVMTRQ--------YG-RHLGFVRNGQ-----SHRMQPILQAG 51 IL +++ I++V++ YG RH ++ + S + + Sbjct: 2 QGFILKTTKVRDEDCIVDVLSESALVRAYRFYGARHSNIIQGYKIDFELSQNQNFLPRLS 61 Query: 52 NLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY 111 ++ + + + F + + A L + ++ ++ + Sbjct: 62 GVMHLGYAWLGNREKLLFWQQFMRLLHAHLKDAEHLDKFYYELLSRAAARFGKQNPRRII 121 Query: 112 DMLNIFLNCHKIPSVIGKIFVQIELMLLKNI----GFGLDLTKCVVT 154 + + + +L+NI GF C Sbjct: 122 VESYAEILKFEGRLHDEPYCFLCDEEILENIALCRGFLPAHEHCAQR 168 >gi|326563903|gb|EGE14154.1| zinc ABC transporter ATPase subunit ZnuC [Moraxella catarrhalis 46P47B1] gi|326566574|gb|EGE16720.1| zinc ABC transporter ATPase subunit ZnuC [Moraxella catarrhalis 12P80B1] Length = 258 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 46/154 (29%), Gaps = 9/154 (5%) Query: 20 IILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCA 79 +IL ++T +G+ +++ I + L + + A Sbjct: 57 LILGLLTPTHGKIT--------KKVRHISYVPQRFNIPTILPLRAIDLLRQANPKRLNQA 108 Query: 80 KLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM-LNIFLNCHKIPSVIGKIFVQIELML 138 + L + L E L L + + + + E L Sbjct: 109 QKDDIFDKLSITSLLSKQMHHLSGGETQRVLLVRALLDKPELLILDEPMQGLDPESESWL 168 Query: 139 LKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + + + +C + V+ DL WV S +C Sbjct: 169 YQFLDQLPEFLQCAMLVVSHDLHWVMKGSRRVIC 202 >gi|296112598|ref|YP_003626536.1| zinc ABC transporter ATPase subunit ZnuC [Moraxella catarrhalis RH4] gi|295920292|gb|ADG60643.1| zinc ABC transporter ATPase subunit ZnuC [Moraxella catarrhalis RH4] gi|326560859|gb|EGE11224.1| zinc ABC transporter ATPase subunit ZnuC [Moraxella catarrhalis 7169] gi|326569758|gb|EGE19808.1| zinc ABC transporter ATPase subunit ZnuC [Moraxella catarrhalis BC8] gi|326570789|gb|EGE20814.1| zinc ABC transporter ATPase subunit ZnuC [Moraxella catarrhalis BC1] gi|326571636|gb|EGE21651.1| zinc ABC transporter ATPase subunit ZnuC [Moraxella catarrhalis BC7] gi|326575085|gb|EGE25013.1| zinc ABC transporter ATPase subunit ZnuC [Moraxella catarrhalis CO72] gi|326576829|gb|EGE26736.1| zinc ABC transporter ATPase subunit ZnuC [Moraxella catarrhalis 101P30B1] gi|326577718|gb|EGE27594.1| zinc ABC transporter ATPase subunit ZnuC [Moraxella catarrhalis O35E] Length = 258 Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 46/154 (29%), Gaps = 9/154 (5%) Query: 20 IILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCA 79 +IL ++T +G+ +++ I + L + + A Sbjct: 57 LILGLLTPTHGKIT--------KKVRHISYVPQRFNIPTILPLRAIDLLRQANPKRLNQA 108 Query: 80 KLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM-LNIFLNCHKIPSVIGKIFVQIELML 138 + L + L E L L + + + + E L Sbjct: 109 QKDDIFDKLSITSLLSKQMHHLSGGETQRVLLVRALLDKPELLILDEPMQGLDPESESWL 168 Query: 139 LKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC 172 + + + +C + V+ DL WV S +C Sbjct: 169 YQFLDQLPEFLQCAMLVVSHDLHWVMKGSRRVIC 202 >gi|329121356|ref|ZP_08249982.1| hypothetical protein HMPREF9083_0443 [Dialister micraerophilus DSM 19965] gi|327469765|gb|EGF15231.1| hypothetical protein HMPREF9083_0443 [Dialister micraerophilus DSM 19965] Length = 217 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 39/135 (28%), Gaps = 1/135 (0%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQ-SHRMQPILQAGNLVRVNWRSRLAQ 64 + I+L + G N I+ + T+ YG FV +L +R + Sbjct: 11 EGILLHSKEAGNGNRIVFIFTKNYGNQTAFVSQSTIKSFGSGLLMPFTYLRCSMAETSFD 70 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 ++E S + I + P E + Y L L Sbjct: 71 KWTLIQYEGKNICDISKFSYEDWCRWCFVIEIIKWGFPLGEKDINAYIRLVKCLKGILDK 130 Query: 125 SVIGKIFVQIELMLL 139 + ++ ML Sbjct: 131 NKQVSAYITALQMLY 145 >gi|329942472|ref|ZP_08291282.1| DNA repair protein RecO [Chlamydophila psittaci Cal10] gi|332287109|ref|YP_004422010.1| DNA repair protein RecO [Chlamydophila psittaci 6BC] gi|325506883|gb|ADZ18521.1| DNA repair protein RecO [Chlamydophila psittaci 6BC] gi|328815382|gb|EGF85370.1| DNA repair protein RecO [Chlamydophila psittaci Cal10] gi|328914348|gb|AEB55181.1| DNA repair protein RecO [Chlamydophila psittaci 6BC] Length = 241 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 61/216 (28%), Gaps = 5/216 (2%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M+ AI L G+ + I + + G F + GQS + + L +L + Sbjct: 1 MHTLTPAITLKNLPQGKHHCITTIFSP-LGLLTFFAKQGQSLYYDFRDALIPLSLGVYSL 59 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + EV + L + + + +P EL+ + FL Sbjct: 60 DHSPPRMRKLLFAEVKNTFSEIKSDLPLLQAAGKMTQSILGSQWQEKPSQELFSLFLNFL 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLP 178 + L LL+ G T C T G C Sbjct: 120 HRLPESKNPEMFAATFLLKLLQYEGILDLSTTCASCKKTILSSSFYRHKGRKFCIEHSPE 179 Query: 179 YAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLN 214 A + + + A + L+++ L Sbjct: 180 SAVIIESEEEKIL--HALVHAKRFQDLLNLSNFHLE 213 >gi|304373214|ref|YP_003856423.1| Rec0 [Mycoplasma hyorhinis HUB-1] gi|304309405|gb|ADM21885.1| Rec0 [Mycoplasma hyorhinis HUB-1] gi|330723925|gb|AEC46295.1| Rec0 [Mycoplasma hyorhinis MCLD] Length = 230 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 29/227 (12%), Positives = 67/227 (29%), Gaps = 9/227 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 +IL V + EK++I++ +T + + + L++ Sbjct: 7 KGLILQVYEFQEKDLIVKTITNKR-IFSFVALGTRKPESKNKFALLESSISELEIFLSRL 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 ++ ++ L + F + ++ L + Sbjct: 66 N-NKLSKLKKATTEISLDLNNSKILEFWRFISFFLNKLEKTSNYFFENLKLAWEIIN-EQ 123 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLV 185 I V + L G + KCV ++L++ + GG C+ + + Sbjct: 124 NYLHIVVFLLANHLVLQGHFISFNKCVKCMKNKNLIYFNFSLGGMFCKIHYKNKDLQNIS 183 Query: 186 LPSFLWKEEQTIDADSLKSAFQLTDYFL----NKYALQHNIIHCHLL 228 L + +++ D D FL K ++ N+ Sbjct: 184 LLKSYYF--LSLNLDQYLKFVNTIDNFLIYEQLKLFIEANLYSFPKN 228 >gi|328480089|gb|EGF49074.1| DNA repair protein recO [Lactobacillus rhamnosus MTCC 5462] Length = 44 Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats. Identities = 5/30 (16%), Positives = 21/30 (70%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGF 35 + +++ ++Y E +++++++T Q+G+ + Sbjct: 15 EGLVMSRQNYRESDMLVKILTDQFGKKCFW 44 >gi|62184795|ref|YP_219580.1| DNA repair protein RecO [Chlamydophila abortus S26/3] gi|81313026|sp|Q5L6W2|RECO_CHLAB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|62147862|emb|CAH63608.1| DNA repair protein [Chlamydophila abortus S26/3] Length = 241 Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 57/205 (27%), Gaps = 7/205 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNW 58 M+ AI L G+ + I + + G F + GQS + + L +L N Sbjct: 1 MHTLTPAITLKTLPQGKHHCITTIFSP-LGLLTFFAKQGQSLYYDFREALIPLSLGVYNL 59 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + EV + L + + + +P EL+ + FL Sbjct: 60 DHSPPKMRKLLFAEVKNTFTTIKSELPLLQAAGKMTQSILGSQWQEKPSQELFSLFLNFL 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVC----RS 174 + L LL+ G T C T G C Sbjct: 120 HRLPESKNPEMFAATFLLKLLQYEGILDLSTTCAACKKTILSASFYRHKGRKFCIEHSPE 179 Query: 175 VGLPYAEKMLVLPSFLWKEEQTIDA 199 + + + L ++ D Sbjct: 180 SAVMIENEEEKILHALVHAKRFQDL 204 >gi|289449826|ref|YP_003475262.1| DNA repair protein RecO [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184373|gb|ADC90798.1| DNA repair protein RecO [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 257 Score = 37.1 bits (84), Expect = 2.4, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 24/59 (40%), Gaps = 2/59 (3%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQP--ILQAGNLVRVNWRSRL 62 ++ + EK+ +E++TR +G+ F + + + +L+ V R Sbjct: 4 KGLVAKINQVKEKDAYIELITRDHGKISLFAQGILLPASRLHKLAVPFSLIEVELSERG 62 >gi|72080494|ref|YP_287552.1| hypothetical protein MHP7448_0155 [Mycoplasma hyopneumoniae 7448] gi|71913618|gb|AAZ53529.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 7448] Length = 226 Score = 36.7 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 65/219 (29%), Gaps = 12/219 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 II+ ++ + ++I+++ T +G + + I + LA+N Sbjct: 7 KGIIVDRLNFRDFDLIIKLAT-NFGIIKMVALGVRKTTSKNIYILNLGCLGEFEIFLAKN 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + L+ L + + + E+ +++ +L + Sbjct: 66 P--NKLSKLKKGECFLHLDLVNKNIYSFWKFSSQIMHEQNFEPKIFPILEQAFFKINTKN 123 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV--------SPKSGGAVCRSVGL 177 I +K G+ +LT C V Q L+ Sbjct: 124 ADAIKVYTIINW-IKFNGWIANLTSCKVCKTNQRLVNFDFAGGMECFRHRSLKPLIRFNP 182 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 E + L + ID + S F + FLNK Sbjct: 183 KELEIIYWSDFSLDLFLEKIDFYYIYSLFDVLKLFLNKN 221 >gi|54020102|ref|YP_115740.1| hypothetical protein mhp227 [Mycoplasma hyopneumoniae 232] gi|53987275|gb|AAV27476.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 232] gi|312601110|gb|ADQ90365.1| Putative uncharacterized protein [Mycoplasma hyopneumoniae 168] Length = 226 Score = 36.7 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 65/219 (29%), Gaps = 12/219 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 II+ ++ + ++I+++ T +G + + I + LA+N Sbjct: 7 KGIIVDRLNFRDFDLIIKLAT-NFGIIKMVALGVRKTTSKNIYILNLGCLGEFEIFLAKN 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + L+ L + + + E+ +++ +L + Sbjct: 66 P--NKLSKLKKGECFLHLDLVNKNIYNFWKFSSQIMHEQNFEPKIFPILEQAFFKINTKN 123 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV--------SPKSGGAVCRSVGL 177 I +K G+ +LT C V Q L+ Sbjct: 124 ADAIKVYTIINW-IKFNGWIANLTSCKVCKTNQRLVNFDFAGGMECFRHRSLKPLIRFNP 182 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 E + L + ID + S F + FLNK Sbjct: 183 KELEIIYWSDFSLDLFLEKIDFYYIYSLFDVLKLFLNKN 221 >gi|157736986|ref|YP_001489669.1| putative recombination protein RecO [Arcobacter butzleri RM4018] gi|157698840|gb|ABV67000.1| conserved hypothetical protein [Arcobacter butzleri RM4018] Length = 205 Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 21/187 (11%), Positives = 52/187 (27%), Gaps = 18/187 (9%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--------------PILQAG 51 IL ++ + ++I+ ++T + + I + Sbjct: 2 QGYILDIKPVKDDDLIVTILTENELLTTYRFYGARHSNINIGYKIDFELEKTRSSISRLK 61 Query: 52 NLVRVNWRSRLAQNLGEFRFEVLESHCAKLLS----SSLFLYGLQSIVPLFRFLPEREPC 107 +++++ + L ++ L S + Y L ++V + Sbjct: 62 DVLQLGFPWILDNEKMYCWQRYIKLFYPHLKDLEQVDSFYFYSLDNLVHIISKQNVLRAI 121 Query: 108 LELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKS 167 E Y L F + IE + GF +KC++ ++ + Sbjct: 122 CESYISLIEFEGRLHSDFECLLCELPIENEISLIRGFIPVHSKCILKSKVFEISKIKELF 181 Query: 168 GGAVCRS 174 Sbjct: 182 KEKKSIH 188 >gi|315636178|ref|ZP_07891432.1| conserved hypothetical protein [Arcobacter butzleri JV22] gi|315479539|gb|EFU70218.1| conserved hypothetical protein [Arcobacter butzleri JV22] Length = 205 Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats. Identities = 21/187 (11%), Positives = 52/187 (27%), Gaps = 18/187 (9%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ--------------PILQAG 51 IL ++ + ++I+ ++T + + I + Sbjct: 2 QGYILDIKPVKDDDLIVTILTENELLTTYRFYGARHSNINIGYKIDFELEKTRSSISRLK 61 Query: 52 NLVRVNWRSRLAQNLGEFRFEVLESHCAKLLS----SSLFLYGLQSIVPLFRFLPEREPC 107 +++++ + L ++ L S + Y L ++V + Sbjct: 62 DVLQLGFPWILDNEKMYCWQRYIKLFYPHLKDLEQVDSFYFYSLDNLVHIISKQNVLRAI 121 Query: 108 LELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKS 167 E Y L F + IE + GF +KC++ ++ + Sbjct: 122 CESYISLIEFEGRLHSDFECLLCELPIENEISLIRGFIPVHSKCILKSRVFEISKIKDLF 181 Query: 168 GGAVCRS 174 Sbjct: 182 KEKKSIH 188 >gi|71893507|ref|YP_278953.1| hypothetical protein MHJ_0151 [Mycoplasma hyopneumoniae J] gi|71851634|gb|AAZ44242.1| conserved hypothetical protein [Mycoplasma hyopneumoniae J] Length = 226 Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 65/219 (29%), Gaps = 12/219 (5%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQN 65 II+ ++ + ++I+++ T +G + + I + LA+N Sbjct: 7 KGIIVDRLNFRDFDLIIKLAT-NFGIIKMVALGVRKTTSKNIYILNLGCLGEFEIFLAKN 65 Query: 66 LGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPS 125 + L+ L + + + E+ +++ +L + Sbjct: 66 P--NKLSKLKKGECFLHLDLVNKNIYNFWKFSSQIMHEQNFEPKIFPILEQAFFKINAKN 123 Query: 126 VIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWV--------SPKSGGAVCRSVGL 177 I +K G+ +LT C V Q L+ Sbjct: 124 ADAIKVYTIINW-IKFNGWIANLTSCKVCKTNQRLVNFDFAGGMECFRHRSLKPLIRFNP 182 Query: 178 PYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKY 216 E + L + ID + S F + FLNK Sbjct: 183 KELEIIYWSDFSLDLFLEKIDFYYIYSLFDVLKLFLNKN 221 >gi|237752637|ref|ZP_04583117.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] gi|229376126|gb|EEO26217.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] Length = 203 Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats. Identities = 18/147 (12%), Positives = 42/147 (28%), Gaps = 14/147 (9%) Query: 6 DAIILGVRSYGEKNIILEVMTRQ--------YGRHLGFVRNGQS------HRMQPILQAG 51 IL +++++++++T++ YG V G ++ I + Sbjct: 2 QGYILSTTRVRDEDLLVKILTKEQIYTLYRFYGARHSVVHLGHKIDFSIEKDLREIGKLR 61 Query: 52 NLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELY 111 + + + + F + L A L + S + E Sbjct: 62 EPLHLAFSWEKEVQIRYFWQQYLHLLNAHLRDITTLDSFYFSHLEEGAKRLRIENPKRCI 121 Query: 112 DMLNIFLNCHKIPSVIGKIFVQIELML 138 L L + + + E L Sbjct: 122 LNLYAKLLNFEGRKNTLQTCLICEQPL 148 >gi|55980592|ref|YP_143889.1| DNA repair protein RecO [Thermus thermophilus HB8] gi|55772005|dbj|BAD70446.1| DNA repair protein RecO [Thermus thermophilus HB8] Length = 229 Score = 36.3 bits (82), Expect = 3.3, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 49/147 (33%), Gaps = 4/147 (2%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRLA 63 ++ I++G + + +++L ++T G VR GQ + L + VR ++ Sbjct: 15 EEGIVVGRKPLPQGDLLLRLVTP-RGSLEAVVRKGQRPTGRTGRLSLFHHVRFQLYAKGE 73 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + E+L L + + L L E +Y +L L Sbjct: 74 GLPTLTQAELLGRLHG--LEAPRRFLLAAFLAELAYRLASPEAAPRIYPLLVSGLRGIAK 131 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTK 150 V + K G G +L Sbjct: 132 HEDPLLPLVWAGWRVAKAGGIGPNLEG 158 >gi|258645784|ref|ZP_05733253.1| putative DNA repair protein RecO [Dialister invisus DSM 15470] gi|260403155|gb|EEW96702.1| putative DNA repair protein RecO [Dialister invisus DSM 15470] Length = 217 Score = 36.3 bits (82), Expect = 3.5, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 32/112 (28%), Gaps = 2/112 (1%) Query: 4 QDDAIILGVRSYGEKNIILEVMTRQYGRHLGFV-RNGQSHRMQPILQAGNLVRVNWRSRL 62 D+ I+L + + I +V T G +V + + + +R Sbjct: 7 NDEGILLHAHAGKDGGKIADVFTLSAGLVRIYVGKTVLERCGSGGMVSFAFLRFTAWKDG 66 Query: 63 AQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDML 114 + LS I + F P+ E +Y +L Sbjct: 67 ENFFMSQYESRMLLDM-MNLSYEEMQCWYYVIELVSIFFPKEERNERVYRLL 117 >gi|164418514|gb|ABY54564.1| gag protein [Human immunodeficiency virus 1] Length = 473 Score = 36.3 bits (82), Expect = 3.5, Method: Composition-based stats. Identities = 9/55 (16%), Positives = 22/55 (40%), Gaps = 2/55 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVR 55 M + AI++ ++ + I++ G+ RN ++ R + + G Sbjct: 355 MSQTNSAILMQRSNFKDSKRIVKCF--NCGKEGHIARNCRAPRKKGCWKCGKEGH 407 >gi|164418512|gb|ABY54563.1| gag protein [Human immunodeficiency virus 1] Length = 473 Score = 36.3 bits (82), Expect = 3.5, Method: Composition-based stats. Identities = 9/55 (16%), Positives = 22/55 (40%), Gaps = 2/55 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVR 55 M + AI++ ++ + I++ G+ RN ++ R + + G Sbjct: 355 MSQTNSAILMQRSNFKDSKRIVKCF--NCGKEGHIARNCRAPRKKGCWKCGKEGH 407 >gi|164418510|gb|ABY54562.1| gag protein [Human immunodeficiency virus 1] Length = 473 Score = 36.3 bits (82), Expect = 3.5, Method: Composition-based stats. Identities = 9/55 (16%), Positives = 22/55 (40%), Gaps = 2/55 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVR 55 M + AI++ ++ + I++ G+ RN ++ R + + G Sbjct: 355 MSQTNSAILMQRSNFKDSKRIVKCF--NCGKEGHIARNCRAPRKKGCWKCGKEGH 407 >gi|164418506|gb|ABY54560.1| gag protein [Human immunodeficiency virus 1] Length = 473 Score = 36.3 bits (82), Expect = 3.5, Method: Composition-based stats. Identities = 9/55 (16%), Positives = 22/55 (40%), Gaps = 2/55 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVR 55 M + AI++ ++ + I++ G+ RN ++ R + + G Sbjct: 355 MSQTNSAILMQRSNFKDSKRIVKCF--NCGKEGHIARNCRAPRKKGCWKCGKEGH 407 >gi|164418490|gb|ABY54552.1| gag protein [Human immunodeficiency virus 1] gi|164418500|gb|ABY54557.1| gag protein [Human immunodeficiency virus 1] Length = 473 Score = 36.3 bits (82), Expect = 3.5, Method: Composition-based stats. Identities = 9/55 (16%), Positives = 22/55 (40%), Gaps = 2/55 (3%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVR 55 M + AI++ ++ + I++ G+ RN ++ R + + G Sbjct: 355 MSQTNSAILMQRSNFKDSKRIVKCF--NCGKEGHIARNCRAPRKKGCWKCGKEGH 407 >gi|126642552|ref|YP_001085536.1| DNA repair protein [Acinetobacter baumannii ATCC 17978] Length = 214 Score = 36.3 bits (82), Expect = 3.8, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 17/152 (11%) Query: 22 LEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKL 81 + + T++YGR G +R Q +R+ + ++ + Sbjct: 1 MHLFTQEYGRVDGILR-------QTPPPQYQPIRLQATGKSELKN---FTKLEILNQPVF 50 Query: 82 LSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIPSVIG-------KIFVQI 134 F G + R P E + ++ + L + S +I Q Sbjct: 51 FFGDAFFAGFYLNEIVLRLCPLEEAMPQTFEQYQLTLLQLQQLSSHENPDLFLRQILRQF 110 Query: 135 ELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPK 166 E +LL +G+ +D + + + Sbjct: 111 EHILLAELGYAIDFSIDSSQKEILPQQFYQFQ 142 >gi|148377706|ref|YP_001256582.1| hypothetical protein MAG_4430 [Mycoplasma agalactiae PG2] gi|148291752|emb|CAL59141.1| Conserved hypothetical protein [Mycoplasma agalactiae PG2] Length = 247 Score = 36.3 bits (82), Expect = 3.8, Method: Composition-based stats. Identities = 27/204 (13%), Positives = 59/204 (28%), Gaps = 15/204 (7%) Query: 8 IILGVRSY--GEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRLA 63 I+L + Y E ++ V+ G F + + LQ G++ +++ Sbjct: 9 IVLKIEDYLQNENAALVTVLG-TNGVFKLFAPGVAKTISKNRQNLQIGSICEIDYFKARF 67 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 N + + + + + ++ L F + + Y+ + + + Sbjct: 68 VNKFSKLKKASLLIMPHYEDNLVLKFISKMMLYLENFSSNSKEVFDAYEECLLKYDYYIK 127 Query: 124 PSVIG---------KIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + I LK G D +C+ +L+ G +C Sbjct: 128 NGFEDIETKGNPLRYMITYIVSKALKYNGIQPDHHRCISCNSPANLVDFKFSEDGFICGQ 187 Query: 175 VGLPYA-EKMLVLPSFLWKEEQTI 197 K L FL+ Sbjct: 188 CTDNQRWTKELKSLYFLFNSLDKY 211 >gi|89898662|ref|YP_515772.1| DNA repair protein RecO [Chlamydophila felis Fe/C-56] gi|89332034|dbj|BAE81627.1| conserved hypothetical protein [Chlamydophila felis Fe/C-56] Length = 247 Score = 36.3 bits (82), Expect = 4.0, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 50/178 (28%), Gaps = 3/178 (1%) Query: 1 MYWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--MQPILQAGNLVRVNW 58 M+ AI L G+ + + + + G F ++GQ+ + L +L + Sbjct: 1 MHTLTPAIALKNLPLGKNHCVTTIFSP-LGLLSFFAKHGQTLHCDFREALIPLSLGIYSL 59 Query: 59 RSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFL 118 + EV S L + + + +P +L+ + FL Sbjct: 60 DYSPPKMRKLISAEVNNPFSEIKSSFPLLQAAGKMGQSILESQWQEKPSQKLFSLFLNFL 119 Query: 119 NCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRSVG 176 + L LL+ G + C G C G Sbjct: 120 HRLPESKNPEMFSATFLLKLLQYEGILDLSSTCATCKQHIPTQQCYRHKGMKFCLEHG 177 >gi|237739233|ref|ZP_04569714.1| ribosome-binding factor A [Fusobacterium sp. 2_1_31] gi|229422841|gb|EEO37888.1| ribosome-binding factor A [Fusobacterium sp. 2_1_31] Length = 120 Score = 35.9 bits (81), Expect = 4.2, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 29/90 (32%), Gaps = 1/90 (1%) Query: 152 VVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDY 211 V+ ++ S V + L +A+ + L EE+ D + + A Sbjct: 20 VLLEEVKNPKIKGLVSVTEVNVTEDLKFADTYFSILPPLNNEEKQYDNEEILEALNEIKG 79 Query: 212 FLNKYALQHNIIHC-HLLRENFLGKLLELI 240 FL K + I +R + + Sbjct: 80 FLRKRVAEEVDIRFTPEIRVKLDNSMENAM 109 >gi|297848208|ref|XP_002891985.1| hypothetical protein ARALYDRAFT_474819 [Arabidopsis lyrata subsp. lyrata] gi|297337827|gb|EFH68244.1| hypothetical protein ARALYDRAFT_474819 [Arabidopsis lyrata subsp. lyrata] Length = 338 Score = 35.9 bits (81), Expect = 4.4, Method: Composition-based stats. Identities = 17/139 (12%), Positives = 33/139 (23%), Gaps = 7/139 (5%) Query: 9 ILGVRSYG-EKNIILEVM--TRQY--GRHLGFVRNGQSHRMQPILQAGNLVRVNWRSRLA 63 +L +YG EK + + T Y G G + + + + L L V R Sbjct: 13 VLSATAYGGEKRAYVTFLAGTGDYVKGVV-GLAKGLRKAKSKYPLVVAVLPDVPEDHRKQ 71 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDM-LNIFLNCHK 122 + +E + + R E +Y + Sbjct: 72 LVDQGCVVKEIEPVYPPENQTEFAMAYYVINYSKLRIWKFVEYSKMIYLDGDIQVFDNID 131 Query: 123 IPSVIGKIFVQIELMLLKN 141 + + Sbjct: 132 HLFDLPNGQFYAVMDCFCE 150 >gi|46198566|ref|YP_004233.1| hypothetical protein TTC0258 [Thermus thermophilus HB27] gi|46196188|gb|AAS80606.1| hypothetical conserved protein [Thermus thermophilus HB27] Length = 291 Score = 35.6 bits (80), Expect = 5.6, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 49/147 (33%), Gaps = 4/147 (2%) Query: 5 DDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-PILQAGNLVRVNWRSRLA 63 ++ I++G + + +++L ++T + G VR GQ + L + VR ++ Sbjct: 77 EEGIVVGRKPLPQGDLLLRLVTPK-GSLEAVVRKGQRPTGRTGRLSLFHHVRFQLYAKGE 135 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKI 123 + E+L L + + L L E +Y +L L Sbjct: 136 GLPTLTQAELLGRLHG--LEAPRRFLLAAFLAELAYRLASPEAAPRIYPLLVSGLRGIAK 193 Query: 124 PSVIGKIFVQIELMLLKNIGFGLDLTK 150 V + K G G L Sbjct: 194 HEDPLLPLVWAGWRVAKAGGIGPSLEG 220 >gi|294783783|ref|ZP_06749107.1| ribosome-binding factor A [Fusobacterium sp. 1_1_41FAA] gi|294480661|gb|EFG28438.1| ribosome-binding factor A [Fusobacterium sp. 1_1_41FAA] Length = 120 Score = 35.6 bits (80), Expect = 5.9, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 29/90 (32%), Gaps = 1/90 (1%) Query: 152 VVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDY 211 V+ ++ S V + L +A+ + L EE+ D + + A Sbjct: 20 VLLEEVKNPKIKGLVSVTEVNVTEDLKFADTYFSILPPLNDEEKQYDHEEILEALNEIKG 79 Query: 212 FLNKYALQHNIIHC-HLLRENFLGKLLELI 240 FL K + I +R + + Sbjct: 80 FLRKRVAEEVDIRFTPEIRVKLDNSMENAM 109 >gi|291320369|ref|YP_003515632.1| hypothetical protein MAGa4650 [Mycoplasma agalactiae] gi|290752703|emb|CBH40677.1| Conserved hypothetical protein [Mycoplasma agalactiae] Length = 247 Score = 35.6 bits (80), Expect = 6.2, Method: Composition-based stats. Identities = 25/204 (12%), Positives = 61/204 (29%), Gaps = 15/204 (7%) Query: 8 IILGVRSY--GEKNIILEVMTRQYGRHLGFVRNGQS--HRMQPILQAGNLVRVNWRSRLA 63 I+L + Y E ++ V+ G F + + LQ G++ +++ Sbjct: 9 IVLKIEDYLQNENAALVTVLG-TNGVFKLFAPGVAKTISKNRQNLQIGSICEIDYFKARF 67 Query: 64 QNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLN---- 119 N + + + + + ++ L + + + Y+ + + Sbjct: 68 VNKFSKLKKASLLIMPHYEDNLVLKFISKMMLYLENYSSNSKEVFDAYEECLLKYDYYVK 127 Query: 120 -----CHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSPKSGGAVCRS 174 + + + + LK G + +C+ +L+ GG +C Sbjct: 128 NGFEDIETKGNPLRYMITYLVSKSLKYNGIQPNHHRCISCNSPANLVDFKFSEGGFICGQ 187 Query: 175 VGLPYA-EKMLVLPSFLWKEEQTI 197 K L FL+ Sbjct: 188 CTENQRWTKELKSLYFLFNSLDKY 211 >gi|237743257|ref|ZP_04573738.1| ribosome-binding factor A [Fusobacterium sp. 7_1] gi|256028612|ref|ZP_05442446.1| ribosome-binding factor A [Fusobacterium sp. D11] gi|260495120|ref|ZP_05815249.1| ribosome-binding factor A [Fusobacterium sp. 3_1_33] gi|289766530|ref|ZP_06525908.1| ribosome-binding factor A [Fusobacterium sp. D11] gi|229433036|gb|EEO43248.1| ribosome-binding factor A [Fusobacterium sp. 7_1] gi|260197563|gb|EEW95081.1| ribosome-binding factor A [Fusobacterium sp. 3_1_33] gi|289718085|gb|EFD82097.1| ribosome-binding factor A [Fusobacterium sp. D11] Length = 120 Score = 35.6 bits (80), Expect = 6.4, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 29/90 (32%), Gaps = 1/90 (1%) Query: 152 VVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDY 211 V+ ++ S V + L +A+ + L +E+ D + + A Sbjct: 20 VLLEEVKNPKIKGLVSVTEVDVTEDLKFADTYFSILPPLNSDEKQYDNEEILEALNEIKG 79 Query: 212 FLNKYALQHNIIHC-HLLRENFLGKLLELI 240 FL K + I +R + I Sbjct: 80 FLRKRVAEEVDIRYTPEIRVKLDNSMENAI 109 >gi|213027935|ref|ZP_03342382.1| DNA repair protein RecO [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 79 Score = 35.6 bits (80), Expect = 6.6, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 21/81 (25%), Gaps = 5/81 (6%) Query: 32 HLGFVRNGQSHRM--QPILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLY 89 + +S R + LQ + + + R A LS Sbjct: 1 MRLVAKGARSKRSNLKGALQPFTPLLLRYSGRGEVKTLR---SAEAVSLALPLSGITLYS 57 Query: 90 GLQSIVPLFRFLPEREPCLEL 110 GL L R L EL Sbjct: 58 GLYINELLSRVLEYETRFSEL 78 >gi|19705315|ref|NP_602810.1| ribosome-binding factor A [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296328563|ref|ZP_06871082.1| ribosome-binding factor A [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|22096032|sp|Q8RHJ7|RBFA_FUSNN RecName: Full=Ribosome-binding factor A gi|19713286|gb|AAL94109.1| Ribosome-binding factor A [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296154372|gb|EFG95171.1| ribosome-binding factor A [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 120 Score = 35.2 bits (79), Expect = 8.0, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 29/90 (32%), Gaps = 1/90 (1%) Query: 152 VVTGVTQDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDY 211 V+ ++ S V + L +A+ + L +E+ D + + A Sbjct: 20 VLLEEVKNPKIKGLVSVTEVDVTEDLKFADTYFSILPPLKSDEKKYDHEEILEALNEIKG 79 Query: 212 FLNKYALQHNIIHC-HLLRENFLGKLLELI 240 FL K + I +R + I Sbjct: 80 FLRKRVAEEVDIRYTPEIRVKLDNSMENAI 109 >gi|281212554|gb|EFA86714.1| STAG domain-containing protein [Polysphondylium pallidum PN500] Length = 871 Score = 35.2 bits (79), Expect = 8.4, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 23/72 (31%), Gaps = 3/72 (4%) Query: 158 QDLLWVSPKSGGAVCRSVGLPYAEKMLVLPSFLWKEEQTIDADSLKSAFQLTDYFLNKYA 217 L +S S + + + + +F ++ L + + FL K Sbjct: 466 DSLRTISAPSESSGTDAEASGGDQANQLFNAFTLLQKIHFSPKELANFLNI---FLEKTI 522 Query: 218 LQHNIIHCHLLR 229 L ++ L R Sbjct: 523 LNIYSLNVPLSR 534 >gi|223038738|ref|ZP_03609031.1| tRNA-dihydrouridine synthase B [Campylobacter rectus RM3267] gi|222880140|gb|EEF15228.1| tRNA-dihydrouridine synthase B [Campylobacter rectus RM3267] Length = 512 Score = 34.8 bits (78), Expect = 9.5, Method: Composition-based stats. Identities = 19/195 (9%), Positives = 41/195 (21%), Gaps = 22/195 (11%) Query: 6 DAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHR--------------------MQ 45 IL + ++++++ ++T + ++ Sbjct: 310 QGYILHTQKVRDEDLLVYILTPSLLVKSYRFYGARHSNVLQGYKIDFELEGGENFLPHLR 369 Query: 46 PILQAGNLVRVNWRSRLAQNLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPERE 105 +L G + R RL R + + F R P+R Sbjct: 370 SVLHLGYR-WLLSRERLLVWQQFMRLLYAHLRDVEQIDEVYFCELELCASRFDRGAPKRL 428 Query: 106 PCLELYDMLNIFLNCHKIPSVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVTQDLLWVSP 165 +L H + + L F C + Sbjct: 429 LIESYVRILEAEGRLHDELFCFICDEPVEDRVALAR-SFLPAHEHCAAQKGFEVEKIKML 487 Query: 166 KSGGAVCRSVGLPYA 180 S + Sbjct: 488 FSERSTLLLDDDEID 502 >gi|206896335|ref|YP_002246851.1| hypothetical protein COPRO5265_0492 [Coprothermobacter proteolyticus DSM 5265] gi|206738952|gb|ACI18030.1| hypothetical protein COPRO5265_0492 [Coprothermobacter proteolyticus DSM 5265] Length = 210 Score = 34.8 bits (78), Expect = 10.0, Method: Composition-based stats. Identities = 23/153 (15%), Positives = 42/153 (27%), Gaps = 24/153 (15%) Query: 12 VRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQ-------PILQAGNLVRVNWRSRLAQ 64 Y E +++L V+ G+ L VR+G+ + + G +++V L Sbjct: 3 RIPYRETDLLLSVLGEHIGKELLTVRSGRKIPNRWKSSFLEGSILLGRILQVKNHHVLTG 62 Query: 65 NLGEFRFEVLESHCAKLLSSSLFLYGLQSIVPLFRFLPEREPCLELYDMLNIFLNCHKIP 124 + E + +L L + L Sbjct: 63 VITEKYVPYEKYSPFMIL-----------------ALEMFSKTPSVDRSSFQLLEKFLTS 105 Query: 125 SVIGKIFVQIELMLLKNIGFGLDLTKCVVTGVT 157 + F Q + + L CVV G Sbjct: 106 EQTARDFDQFLVSFMVKESLQPSLNSCVVCGEK 138 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.314 0.122 0.324 Lambda K H 0.267 0.0374 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,753,407,139 Number of Sequences: 14124377 Number of extensions: 75267036 Number of successful extensions: 231934 Number of sequences better than 10.0: 2115 Number of HSP's better than 10.0 without gapping: 1886 Number of HSP's successfully gapped in prelim test: 229 Number of HSP's that attempted gapping in prelim test: 228779 Number of HSP's gapped (non-prelim): 2179 length of query: 240 length of database: 4,842,793,630 effective HSP length: 135 effective length of query: 105 effective length of database: 2,936,002,735 effective search space: 308280287175 effective search space used: 308280287175 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.2 bits) S2: 79 (35.2 bits)