RPSBLAST alignment of GI: 254780948 and SCOP domain: d1u5ka1

Alignment

>d1u5ka1 b.40.4.13 (A:2-80) Recombinational repair protein RecO, N-terminal domain {Deinococcus radiodurans [TaxId: 1299]} Length = 79

 Score = 42.9 bits (101), Expect = 3e-05
 Identities = 12/66 (18%), Positives = 21/66 (31%), Gaps = 1/66 (1%)

Query: 2  YWQDDAIILGVRSYGEKNIILEVMTRQYGRHLGFVRNGQSHRMQPILQAGNLVRVNWRSR 61
                I++  R     +II+ ++T Q        R G    +   L   + V V     
Sbjct: 4  TANRSGIVIRRRVTPAGDIIVTLLTPQGKLK-AIARGGVKGPLSSSLNLFHHVGVQVYQG 62

Query: 62 LAQNLG 67
             +L 
Sbjct: 63 PHNDLA 68

SCOP domain information

class: All beta proteins
fold: OB-fold
superfamily: Nucleic acid-binding proteins
family: RecO N-terminal domain-like
domain: Recombinational repair protein RecO, N-terminal domain
species: Deinococcus radiodurans [TaxId: 1299]