HHsearch alignment for GI: 254780949 and conserved domain: COG1187

>COG1187 RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].

Probab=96.56  E-value=0.011  Score=37.95  Aligned_cols=45  Identities=20%  Similarity=0.374  Sum_probs=39.2

Q ss_pred             CCHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCEECHHH
Q ss_conf             9889999984997886899999876987988798048000237777
Q gi|254780949|r  350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD  395 (418)
Q Consensus       350 ~~l~dlL~~~gL~~SksEARRlI~qGgV~IN~~kI~d~~~~i~~~d  395 (418)
T Consensus         3 ~RL~K~La~~G~~-SRr~ae~lI~~G~V~VnG~v~~~~~~~v~~~~   47 (248)
T COG1187           3 MRLNKFLAEAGVG-SRREAEKLIEEGRVTVNGKVATLGGVVVDPDD   47 (248)
T ss_pred             CCHHHHHHHCCCC-CHHHHHHHHHCCCEEECCEEECCCCEEECCCC
T ss_conf             2068999874777-88999999973987889999224776727987