HHsearch alignment for GI: 254780949 and conserved domain: COG1188
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis].
Probab=94.15 E-value=0.12 Score=31.10 Aligned_cols=57 Identities=19% Similarity=0.316 Sum_probs=46.0
Q ss_pred CCHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCEECHHHHCCCCEEEEEECCEEEE
Q ss_conf 988999998499788689999987698798879804800023777714797699977785489
Q gi|254780949|r 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412 (418)
Q Consensus 350 ~~l~dlL~~~gL~~SksEARRlI~qGgV~IN~~kI~d~~~~i~~~d~~~~~~liLr~GKK~~~ 412 (418)
T Consensus 9 mRLDKwL~~aR~~KrRslAk~~~~~GrV~vNG~~aK-pS~~VK~-----GD~l~i~~~~~~~~ 65 (100)
T COG1188 9 MRLDKWLWAARFIKRRSLAKEMIEGGRVKVNGQRAK-PSKEVKV-----GDILTIRFGNKEFT 65 (100)
T ss_pred EEHHHHHHHHHHHHHHHHHHHHHHCCEEEECCEECC-CCCCCCC-----CCEEEEEECCCEEE
T ss_conf 656788878877422899999987796989996756-5561477-----98999995781899