HHsearch alignment for GI: 254780949 and conserved domain: COG2302

>COG2302 Uncharacterized conserved protein, contains S4-like domain [Function unknown].

Probab=94.59  E-value=0.077  Score=32.41  Aligned_cols=55  Identities=16%  Similarity=0.314  Sum_probs=46.1

Q ss_pred             HHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCEECHHHHC----CCCEEEEEEC
Q ss_conf             999998499788689999987698798879804800023777714----7976999777
Q gi|254780949|r  353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD----STGNIKLSFG  407 (418)
Q Consensus       353 ~dlL~~~gL~~SksEARRlI~qGgV~IN~~kI~d~~~~i~~~d~~----~~~~liLr~G  407 (418)
T Consensus       183 LD~vis~~~~~SR~~a~~lIe~g~VkVN~k~v~~~s~~v~~GDliSirG~GR~~i~~i~  241 (257)
T COG2302         183 LDVVISEGFGLSRAKAQQLIEKGKVKVNWKVVDKASYEVQEGDLISIRGFGRLKILEIN  241 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEECCCCEEEEECCCCEEEEEEC
T ss_conf             79999988765599999987737327712991266633224989998404517898625