HHsearch alignment for GI: 254780949 and conserved domain: COG2501

>COG2501 S4-like RNA binding protein [Replication, recombination, and repair].
Probab=93.49  E-value=0.1  Score=31.66  Aligned_cols=43  Identities=19%  Similarity=0.270  Sum_probs=36.8

Q ss_pred             CCCCHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCE
Q ss_conf             6998899999849978868999998769879887980480002
Q gi|254780949|r  348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ  390 (418)
Q Consensus       348 ~~~~l~dlL~~~gL~~SksEARRlI~qGgV~IN~~kI~d~~~~  390 (418)
T Consensus        10 e~I~L~qlLK~~g~i~sGG~AK~~i~eg~V~vNGe~EtRRgkK   52 (73)
T COG2501          10 EFITLGQLLKLAGLIESGGQAKAFIAEGEVKVNGEVETRRGKK   52 (73)
T ss_pred             CEEEHHHHHHHHCCCCCCHHHHHHHHCCEEEECCEEECCCCCE
T ss_conf             5187999998749505747888998779189888663016776