HHsearch alignment for GI: 254780949 and conserved domain: COG2501
>COG2501 S4-like RNA binding protein [Replication, recombination, and repair].
Probab=93.49 E-value=0.1 Score=31.66 Aligned_cols=43 Identities=19% Similarity=0.270 Sum_probs=36.8
Q ss_pred CCCCHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCE
Q ss_conf 6998899999849978868999998769879887980480002
Q gi|254780949|r 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390 (418)
Q Consensus 348 ~~~~l~dlL~~~gL~~SksEARRlI~qGgV~IN~~kI~d~~~~ 390 (418)
T Consensus 10 e~I~L~qlLK~~g~i~sGG~AK~~i~eg~V~vNGe~EtRRgkK 52 (73)
T COG2501 10 EFITLGQLLKLAGLIESGGQAKAFIAEGEVKVNGEVETRRGKK 52 (73)
T ss_pred CEEEHHHHHHHHCCCCCCHHHHHHHHCCEEEECCEEECCCCCE
T ss_conf 5187999998749505747888998779189888663016776