HHsearch alignment for GI: 254780949 and conserved domain: PRK10475
>PRK10475 23S rRNA pseudouridine synthase F; Provisional.
Probab=96.27 E-value=0.014 Score=37.32 Aligned_cols=47 Identities=15% Similarity=0.308 Sum_probs=29.7
Q ss_pred EEECCCC--HHHHHHHHC-----------CCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCC
Q ss_conf 0236871--022354310-----------1233345799799999886207888987997506888
Q gi|254780949|r 228 LLTTASG--TKMGKTLSG-----------AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP 280 (418)
Q Consensus 228 LLt~~dG--~KmgKS~~n-----------aIwLd~~~tSPy~fyQf~~n~~D~dV~kyLklfT~l~ 280 (418)
T Consensus 181 L~EGknRqIRRm~~~~g~~V~~L~Ri~iG~i~L~~--L~~----G~wR~Lt~~Ei~~l~~~~~~~~ 240 (290)
T PRK10475 181 LVQGLNRQIRRMCEHFGYEVTKLERTRIMNVSLSG--IPL----GEWRDLTDDELIDLFKLIENSS 240 (290)
T ss_pred EECCCCHHHHHHHHHCCCEEEEEEEEEECCEECCC--CCC----CCCEECCHHHHHHHHHHHHCCC
T ss_conf 98680499999999859978178999988878589--899----8715899999999997653434