HHsearch alignment for GI: 254780949 and conserved domain: PRK12282
>PRK12282 tryptophanyl-tRNA synthetase II; Reviewed.
Probab=99.90 E-value=7.4e-22 Score=164.44 Aligned_cols=252 Identities=17% Similarity=0.227 Sum_probs=172.8
Q ss_pred CEEEEEEECCCCCCCCHHHHHHHHHHH-HHHHCCCEEEEEEECHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 818999843787620243489999999-9998598499998260111448898862102468899999999999998876
Q gi|254780949|r 35 VVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF 113 (418)
Q Consensus 35 ~~~~y~G~DpT~~slH~G~l~~~~~l~-~~q~~Gh~~i~liG~~T~~IGDPsgk~~~R~~l~~~~i~~n~~~~~~q~~~~ 113 (418)
T Consensus 2 k~~ilSGiqPTG~-~HLGnylGai~~~v~lQ~~~-~~~~~IaDlHalT~~~---------~~~~~l~~~~~~~---aa~~ 67 (333)
T PRK12282 2 KPIILTGDRPTGK-LHLGHYVGSLKNRVALQNEH-KQFVLIADTQALTDNA---------HNPEKIRENILEV---ALDY 67 (333)
T ss_pred CCEEEECCCCCCC-CHHHHHHHHHHHHHHHHCCC-CCEEEEECHHHHHCCC---------CCHHHHHHHHHHH---HHHH
T ss_conf 9978849087883-54887899999999997168-8079984478874589---------9999999999999---9999
Q ss_pred HHCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 53267776402330167523431346888752234478753478888740---356883157889898989999999854
Q gi|254780949|r 114 IKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL---KREQSLSFLEFNYMILQAYDFVELAKN 190 (418)
Q Consensus 114 ~~~~~~~~~~~i~~N~~W~~~~~~~~~lr~~g~~~~v~~mL~rd~v~~Rl---~~~~~is~~EF~Y~llQayD~~~L~~~ 190 (418)
T Consensus 68 lA~GlDP~k~~if~QS~v~e-h~eL~w~--l~~~~~~~~l~r~~~~K~k~~~~~~~~~i~~Gl~~YPvLmAADILly--- 141 (333)
T PRK12282 68 LAVGIDPAKSTIFVQSQIPA-LAELTMY--YMNLVTVARLERNPTVKTEIAQKGFGRSIPAGFLTYPVSQAADITAF--- 141 (333)
T ss_pred HHCCCCCCCEEEEECCCCHH-HHHHHHH--HHHCCCHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHC---
T ss_conf 97589856428997378668-8999999--98308488987343599998612888887631103769860204513---
Q ss_pred CCCCEECCCCHHHHHHHHHHHHHHHCC---CCCEEEEEECE------EECCCCH-HHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 297020154125889988899997316---79717983110------2368710-2235431012333457997999998
Q gi|254780949|r 191 YDCRLQMGGSDQWGNIICGIDLGERLK---TPKLFALTSPL------LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQY 260 (418)
Q Consensus 191 ~~~~iqiGGsDQwgNi~~G~eLir~~~---~~~~~glT~PL------Lt~~dG~-KmgKS~~naIwLd~~~tSPy~fyQf 260 (418)
T Consensus 142 -~a~~VPVG~DQ~qHlELtRdiA~rfN~~yg~~~f~~P~~~~~~~~ri~~Ldg~~KMSKS~~n~I~L~---D~~~~I~kK 217 (333)
T PRK12282 142 -KATLVPVGDDQLPMIEQTNEIVRRFNHTYGTDVLVEPEALLPEAGRLPGLDGKAKMSKSLGNAIYLS---DSADTIKKK 217 (333)
T ss_pred -CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC---CCHHHHHHH
T ss_conf -7880766652599999999999999987098656886230454566729998501059999962144---899999999
Q ss_pred HHH-HCHH--------------HHHHHHHHHCCCCHHHHHHHHHH-HHCCC--CHHHHHHHHHHHHHHH
Q ss_conf 862-0788--------------89879975068885675554333-21022--0268898999999730
Q gi|254780949|r 261 WRN-IDDA--------------DVVSFAKRLTTLPMSEIDRMAKL-QGKEI--NEAKKIIATEITTMVH 311 (418)
Q Consensus 261 ~~n-~~D~--------------dV~kyLklfT~l~l~EI~~l~~~-~~~~p--r~aKk~LA~EiT~lvH 311 (418)
T Consensus 218 I~ka~TDs~~~~~~dp~~~~~n~v~~~~~~~~~-~~~~~~~~~~~y~~gg~g~g~~K~~Lae~v~~~l~ 285 (333)
T PRK12282 218 VMSMYTDPNHLRVEDPGQVEGNVVFTYLDAFDP-DKAKVAELKAHYQRGGLGDVKTKRYLEDVLQEELA 285 (333)
T ss_pred HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC-CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 883868998776779998762369999999678-88899999999871898779999999999999978