HHsearch alignment for GI: 254780949 and conserved domain: PRK12283
>PRK12283 tryptophanyl-tRNA synthetase; Reviewed.
Probab=99.84 E-value=2.4e-19 Score=147.94 Aligned_cols=252 Identities=15% Similarity=0.171 Sum_probs=167.4
Q ss_pred CEEEEEEECCCCCCCCHHHHHHHHHHH-HHHHCCCEEEEEEECHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 818999843787620243489999999-9998598499998260111448898862102468899999999999998876
Q gi|254780949|r 35 VVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF 113 (418)
Q Consensus 35 ~~~~y~G~DpT~~slH~G~l~~~~~l~-~~q~~Gh~~i~liG~~T~~IGDPsgk~~~R~~l~~~~i~~n~~~~~~q~~~~ 113 (418)
T Consensus 2 ~~rvlSGiqPTG~-lHLGNylGai~~~v~lQ~-~~~~~~~IaDlHAlT---------~~~~~p~~l~~~~~~---~~a~~ 67 (398)
T PRK12283 2 PDRVLSGMRPTGR-LHLGHYHGVLKNWVKLQH-EYPCFFFVADWHALT---------THYETPEVIEKNVWD---MVIDW 67 (398)
T ss_pred CCCCEECCCCCCC-CCHHHHHHHHHHHHHHHH-CCCEEEEEECHHHHC---------CCCCCHHHHHHHHHH---HHHHH
T ss_conf 9727527178998-616889999999999860-377089995365520---------787899999999999---99999
Q ss_pred HHCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5326777640233016752343134688875223447875347888874035---6883157889898989999999854
Q gi|254780949|r 114 IKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR---EQSLSFLEFNYMILQAYDFVELAKN 190 (418)
Q Consensus 114 ~~~~~~~~~~~i~~N~~W~~~~~~~~~lr~~g~~~~v~~mL~rd~v~~Rl~~---~~~is~~EF~Y~llQayD~~~L~~~ 190 (418)
T Consensus 68 LA~GlDP~ks~if~QS~Vp-eh~eL~wi--L~~~~~~g~L~Rm~q~Kdk~~~~~~~~~~~~GL~~YPvLmAADILly~a~ 144 (398)
T PRK12283 68 LAAGVDPAQATLFIQSKVP-EHAELHLL--LSMITPLGWLERVPTYKDQQEKLKEKDLSTYGFLGYPLLQAADILLYRAG 144 (398)
T ss_pred HHCCCCCCCCEEEECCCCH-HHHHHHHH--HCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 9758881307588678868-99999999--72778779987264113455401455543320224758999888860767
Q ss_pred CCCCEECCCCHHHHHHHHHHHHHHHCCCC----CE---------------------------------------------
Q ss_conf 29702015412588998889999731679----71---------------------------------------------
Q gi|254780949|r 191 YDCRLQMGGSDQWGNIICGIDLGERLKTP----KL--------------------------------------------- 221 (418)
Q Consensus 191 ~~~~iqiGGsDQwgNi~~G~eLir~~~~~----~~--------------------------------------------- 221 (418)
T Consensus 145 -~VPV---G~DQ~QHlELtRdiA~rFN~~yg~~~~~~~~~~~~~~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (398)
T PRK12283 145 -LVPV---GEDQVPHVEMTREIARRFNHLYGREPGFEEKAEAAIKKLGKKRAKLYHELRNAYQEEGDDEALEQARALLQE 220 (398)
T ss_pred -EEEC---CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
T ss_conf -5530---664089999999999999987176644210013444310210012333343322102420222123332100
Q ss_pred ---------------------EEEE--------ECEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHH-HCHH----
Q ss_conf ---------------------7983--------11023687102235431012333457997999998862-0788----
Q gi|254780949|r 222 ---------------------FALT--------SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA---- 267 (418)
Q Consensus 222 ---------------------~glT--------~PLLt~~dG~KmgKS~~naIwLd~~~tSPy~fyQf~~n-~~D~---- 267 (418)
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~lp~P~~l~~~~~~m~glDGkKMSKS~~n~I~L~---D~~~~I~KKI~kavTDs~~~~ 297 (398)
T PRK12283 221 QQNLSMGDRERLFGYLEGAGKIILPEPQALLTEASKMPGLDGQKMSKSYGNTIGLR---EDPETVTKKIRTMPTDPARVR 297 (398)
T ss_pred CCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC---CCHHHHHHHHHHCCCCCCCCC
T ss_conf 01122100333310024666302578711257566266999864579999975552---899999999974666987675
Q ss_pred ----------HHHHHHHHHCCCCHHHHHHHHH---HHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf ----------8987997506888567555433---32102202688989999997300
Q gi|254780949|r 268 ----------DVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAKKIIATEITTMVHG 312 (418)
Q Consensus 268 ----------dV~kyLklfT~l~l~EI~~l~~---~~~~~pr~aKk~LA~EiT~lvHG 312 (418)
T Consensus 298 ~~dpg~pe~~~v~nL~~i~s~~~--~~~~~~~~~~~~g~g~~~~Kk~Lae~i~e~L~P 353 (398)
T PRK12283 298 RTDPGDPEKCPVWQLHQVYSDEE--TKEWVQKGCRSAGIGCLDCKQPVIEAILREQQP 353 (398)
T ss_pred CCCCCCCCCCHHHHHHHHHCCCH--HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 67789966225999999977933--789999998767987899999999999998589