HHsearch alignment for GI: 254780949 and conserved domain: pfam01406

>pfam01406 tRNA-synt_1e tRNA synthetases class I (C) catalytic domain. This family includes only cysteinyl tRNA synthetases.

Probab=97.78  E-value=0.00044  Score=47.23  Aligned_cols=75  Identities=19%  Similarity=0.161  Sum_probs=47.6

Q ss_pred             HCCCEEEEEEECCCCCCCCHHHHHHHHH----HHHHHHCCCEEEEEEECHHHCCCCCCCCCCCCCCCCHHHHHH-HHHHH
Q ss_conf             1498189998437876202434899999----999998598499998260111448898862102468899999-99999
Q gi|254780949|r   32 SQGVVTAYIGYDLTASSLHAGHLTQLML----LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE-NIEKI  106 (418)
Q Consensus        32 ~~~~~~~y~G~DpT~~slH~G~l~~~~~----l~~~q~~Gh~~i~liG~~T~~IGDPsgk~~~R~~l~~~~i~~-n~~~~  106 (418)
T Consensus         6 ~~~~v~~YicgPt~Y~~pHIGHa~t~I~~Dvi~R~~r~~G~~V~fv~--g~ddhgdKI~~~A~~~g~~p~e~~d~~~~~F   83 (301)
T pfam01406         6 HQGKVNMYVCGPTVYDDSHIGHARSAVAFDVLRRYLQALGYDVQFVQ--NFTDIDDKIIKRAQQQGESFRELAARFITAY   83 (301)
T ss_pred             CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE--CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf             79937899789906899752233689999999999997499469996--7786317999999980986537999999999


Q ss_pred             HH
Q ss_conf             99
Q gi|254780949|r  107 KG  108 (418)
Q Consensus       107 ~~  108 (418)
T Consensus        84 ~~   85 (301)
T pfam01406        84 TK   85 (301)
T ss_pred             HH
T ss_conf             98