HHsearch results for GI: 254780949 and protein with PDBid: 1ffy_A
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A*
Probab=97.48 E-value=0.00028 Score=47.03 Aligned_cols=57 Identities=25% Similarity=0.389 Sum_probs=37.7
Q ss_pred CCCCEECCCCHH---HHHHHHHHHHHHHCCCCC-EEEEEECEEECCCCHHHHHHHHCCCCCC
Q ss_conf 297020154125---889988899997316797-1798311023687102235431012333
Q gi|254780949|r 191 YDCRLQMGGSDQ---WGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAIWLN 248 (418)
Q Consensus 191 ~~~~iqiGGsDQ---wgNi~~G~eLir~~~~~~-~~glT~PLLt~~dG~KmgKS~~naIwLd 248 (418)
|-+++-++|.|| |+.-..=....- .+..| --.++-.++.+.+|+|||||.||.|..+
T Consensus 547 ~P~Dl~i~G~D~~r~wf~~~l~~~~~~-~~~~Pfk~v~~hG~vld~~G~KMSKS~GNvi~P~ 607 (917)
T 1ffy_A 547 FPADMYLEGSDQYRGWFNSSITTSVAT-RGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPD 607 (917)
T ss_dssp SSBSEEEEEGGGGTTHHHHHHHHHHHH-HSSCSBSEEEEECCEECTTSCCCCSSSSCCCCHH
T ss_pred CCCCEEECCHHHHHHHHHHHHHHHHHC-CCCCCCCEEEECCEEECCCCCCCCCCCCCCCCHH
T ss_conf 877403336079750789998776641-7988510787413299999887766788977956