HHsearch results for GI: 254780949 and protein with PDBid: 1gax_A
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A
Probab=97.27 E-value=0.00047 Score=45.62 Aligned_cols=59 Identities=19% Similarity=0.074 Sum_probs=40.3
Q ss_pred HCCCCEECCCCHHHHHHHH---HHHHHHHCCC-CCEEEEEECEEECCCCHHHHHHHHCCCCCCC
Q ss_conf 4297020154125889988---8999973167-9717983110236871022354310123334
Q gi|254780949|r 190 NYDCRLQMGGSDQWGNIIC---GIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249 (418)
Q Consensus 190 ~~~~~iqiGGsDQwgNi~~---G~eLir~~~~-~~~~glT~PLLt~~dG~KmgKS~~naIwLd~ 249 (418)
-|-+++-++|.||-.+-.+ -.-+. -.+. .+--.++..++...+|+|||||.||.|+.++
T Consensus 479 ~~P~d~~~~G~Dii~~w~~~~~~~~~~-~~~~~p~k~v~~hG~vl~~~G~KMSKS~GNvi~p~~ 541 (862)
T 1gax_A 479 FYPGDVLVTGYDILFLWVSRMEVSGYH-FMGERPFKTVLLHGLVLDEKGQKMSKSKGNVIDPLE 541 (862)
T ss_dssp SCSBSCEEEEGGGTTTTHHHHHHHHHH-HSSSCSBSEEEEECCEECTTSCBCCTTTTCCCCHHH
T ss_pred CCCCCEEEEEEHHHHHHHHHHHHHHHH-HCCCCCCCEEEEECEEECCCCCCCCCCCCCCCCHHH
T ss_conf 089718986256777799999997576-449888666887141998898667788999799899