HHsearch results for GI: 254780949 and protein with PDBid: 1i6k_A
>1i6k_A TRPRS, tryptophanyl-tRNA synthetase; class I tRNA synthetase, AARS, induced FIT, ligase; HET: TYM; 1.72A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 1i6l_A* 1i6m_A* 1m83_A* 1mau_A* 1maw_A* 1mb2_A* 2ov4_A* 3fhj_A* 3fi0_A* 1d2r_A
Probab=99.92 E-value=4.7e-24 Score=177.48 Aligned_cols=253 Identities=16% Similarity=0.185 Sum_probs=182.5
Q ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 18999843787620243489999999999859849999826011144889886210246889999999999999887653
Q gi|254780949|r 36 VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115 (418)
Q Consensus 36 ~~~y~G~DpT~~slH~G~l~~~~~l~~~q~~Gh~~i~liG~~T~~IGDPsgk~~~R~~l~~~~i~~n~~~~~~q~~~~~~ 115 (418)
.++|.||-|||. +||||+++.++-....+.|++++++|.|++++...+ +.+++.+++.. .+..++-
T Consensus 2 krv~tG~~PSG~-~HlG~~~g~i~~~~~lq~~~~~~i~iAD~ha~~~~~----------~~~~l~~~~~~---~~~~~~A 67 (328)
T 1i6k_A 2 KTIFSGIQPSGV-ITIGNYIGALRQFVELQHEYNCYFCIVDQHAITVWQ----------DPHELRQNIRR---LAALYLA 67 (328)
T ss_dssp CEEEEEECCCSC-CBHHHHHHTHHHHHHHTTTSEEEEEECHHHHTTSCC----------CHHHHHHHHHH---HHHHHHH
T ss_pred CEEEECCCCCCC-CHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCC----------CHHHHHHHHHH---HHHHHHH
T ss_conf 846857288870-378889999999999857998899963086640678----------99999999999---9999998
Q ss_pred CCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE
Q ss_conf 26777640233016752343134688875223447875347888874035688315788989898999999985429702
Q gi|254780949|r 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195 (418)
Q Consensus 116 ~~~~~~~~~i~~N~~W~~~~~~~~~lr~~g~~~~v~~mL~rd~v~~Rl~~~~~is~~EF~Y~llQayD~~~L~~~~~~~i 195 (418)
.+-++.+..++..+++-..-.+..++. ...+++.+.+.-.++.+.......++..|.||+|||-|.+++ +.++
T Consensus 68 ~G~dp~k~~i~~qs~~~~~~~l~~~~~---~~~~~~~~~r~~~~k~~~~~~~~~~~g~l~YP~lQaADIl~~----~~d~ 140 (328)
T 1i6k_A 68 VGIDPTQATLFIQSEVPAHAQAAWMLQ---CIVYIGELERMTQFKEKSAGKEAVSAGLLTYPPLMAADILLY----NTDI 140 (328)
T ss_dssp TTCCTTTEEEEEGGGCTHHHHHHHHHH---HHSCHHHHHTCHHHHHHHTTCSSCCHHHHTHHHHHHHHHHTT----TCSE
T ss_pred HCCCCCCEEEEECCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCHHH----CCCC
T ss_conf 379987307985042355789999998---532478888764123221246788723237568762030631----8991
Q ss_pred ECCCCHHHHHHHHHHHHHHHCCCC--CEEEEEEC--------EEECCCC-HHHHHHHHC---CCCCCCCCCCHHHHHHHH
Q ss_conf 015412588998889999731679--71798311--------0236871-022354310---123334579979999988
Q gi|254780949|r 196 QMGGSDQWGNIICGIDLGERLKTP--KLFALTSP--------LLTTASG-TKMGKTLSG---AIWLNKEMTSPYNFWQYW 261 (418)
Q Consensus 196 qiGGsDQwgNi~~G~eLir~~~~~--~~~glT~P--------LLt~~dG-~KmgKS~~n---aIwLd~~~tSPy~fyQf~ 261 (418)
..||.||.-.+...||+.+|++.. ..+-...| ++...|| .||+||.++ +|.|. .||-+..++.
T Consensus 141 vpvG~DQ~~h~~ltRdia~k~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kmskS~~~~~~~I~l~---d~~~~i~kKi 217 (328)
T 1i6k_A 141 VPVGEDQKQHIELTRDLAERFNKRYGELFTIPEARIPKVGARIMSLVDPTKKMSKSDPNPKAYITLL---DDAKTIEKKI 217 (328)
T ss_dssp EECCGGGHHHHHHHHHHHHHHHHHHCSCCCCCEEECCSSSSSCBCSSCTTSBCCTTCSCGGGCCBTT---CCHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC---CCHHHHHHHH
T ss_conf 5488026899999999998746524875677311356543456524898766776789855530365---8999999741
Q ss_pred HHH-CH------------HHHHHHHHHHCCCCHHHHHHHHHH-HHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 620-78------------889879975068885675554333-2102202688989999997300
Q gi|254780949|r 262 RNI-DD------------ADVVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMVHG 312 (418)
Q Consensus 262 ~n~-~D------------~dV~kyLklfT~l~l~EI~~l~~~-~~~~pr~aKk~LA~EiT~lvHG 312 (418)
++. .| -.+...+.+|..++-++++++++. .+....++|+.||+.+.+.+-.
T Consensus 218 ~~a~td~~~~~~~~~~~~p~~~~l~~i~~~~~~~~~eel~~~y~~~~~gdlK~~lae~l~~~l~P 282 (328)
T 1i6k_A 218 KSAVTDSEGTIRYDKEAKPGISNLLNIYSTLSGQSIEELERQYEGKGYGVFKADLAQVVIETLRP 282 (328)
T ss_dssp HHCCCCSSCCCCCBTTTBHHHHHHHHHHHHHHCCCHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 44657897766767678998541422002158867999999977998668999999999998589