HHsearch results for GI: 254780949 and protein with PDBid: 1jil_A
>1jil_A Tyrrs, tyrosyl-tRNA synthetase, tyrosyl-transfer; truncation, structure based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A*
Probab=100.00 E-value=0 Score=1073.55 Aligned_cols=406 Identities=36% Similarity=0.638 Sum_probs=384.5
Q ss_pred HHHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECHHHCCCC
Q ss_conf 36799999996892002299899999851498189998437876202434899999999998598499998260111448
Q gi|254780949|r 4 FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83 (418)
Q Consensus 4 ~~~~~~~~L~~Rg~i~~~~~~~~l~~~l~~~~~~~y~G~DpT~~slH~G~l~~~~~l~~~q~~Gh~~i~liG~~T~~IGD 83 (418)
|-++++++|.|||+++++|++++|+++++++++++||||||||||||+||+||+|+|++||++||+||+|||||||+|||
T Consensus 1 m~~~~~~~L~~Rg~i~~~t~~~~l~~~l~~~~~~~y~G~DPTa~sLHlGh~v~l~~l~~~q~~Gh~~i~liGg~T~~IGD 80 (420)
T 1jil_A 1 MTNVLIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLIGGGTGMIGD 80 (420)
T ss_dssp -CCHHHHHHHHTTCCCCBSCHHHHHHHHHHSCCEEEEEECCSSSSCBHHHHHHHHHHHHHHHTTCEEEEEECTTGGGTCC
T ss_pred CCHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC
T ss_conf 96489999997799144289999999985799579992678987621553999999999998699179996675301369
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 89886210246889999999999999887653267776402330167523431346888752234478753478888740
Q gi|254780949|r 84 PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163 (418)
Q Consensus 84 Psgk~~~R~~l~~~~i~~n~~~~~~q~~~~~~~~~~~~~~~i~~N~~W~~~~~~~~~lr~~g~~~~v~~mL~rd~v~~Rl 163 (418)
||||+++|++|+.++|.+|+++|+.|+.+++++.+ ++++++|||++||++|+++||||++|+|||||+||+||+|++|+
T Consensus 81 Psgk~~~R~~l~~~~v~~n~~~~~~q~~~~~~~~~-~~~~~iv~N~~W~~~~~~~d~l~~~g~~~tv~~ML~rd~~k~Rl 159 (420)
T 1jil_A 81 PSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGT-DHGAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL 159 (420)
T ss_dssp CTTCSSCCCCCCHHHHHHHHHHHHHHHHHHSCCSS-SSSCEEEETHHHHTTCCHHHHHHHTGGGCCHHHHHTCGGGHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCEEEECCHHHHCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHH
T ss_conf 99985323555289999999998999998875503-56549954468655563999999851221000677637999875
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHCC-CCCEEEEEECEEECCCCHHHHHHHH
Q ss_conf 356883157889898989999999854297020154125889988899997316-7971798311023687102235431
Q gi|254780949|r 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLS 242 (418)
Q Consensus 164 ~~~~~is~~EF~Y~llQayD~~~L~~~~~~~iqiGGsDQwgNi~~G~eLir~~~-~~~~~glT~PLLt~~dG~KmgKS~~ 242 (418)
+ +|||||||+|||||||||+||+.+++|++|||||||||||++|||||||.+ ++++||+|+||||++||+|||||+|
T Consensus 160 ~--~~is~~EF~YpllQayDf~~L~~~~~~~iqiGGsDQ~gNi~~G~~Li~~~~~~~~~~glt~pLl~~~~G~KmgKS~~ 237 (420)
T 1jil_A 160 E--HGISYTEFTYTILQAIDFGHLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSES 237 (420)
T ss_dssp T--TTCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEEGGGHHHHHHHHHHHHHHHCCCCCEEEEECCCBCTTSCBTTBCSS
T ss_pred H--CCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHCCC
T ss_conf 0--89761014115566767999887609228995030001266658888754377753999840037766657022379
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHCHHHHHH
Q ss_conf 0123334579979999988620788898799750688856755543332--10220268898999999730000046799
Q gi|254780949|r 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAA 320 (418)
Q Consensus 243 naIwLd~~~tSPy~fyQf~~n~~D~dV~kyLklfT~l~l~EI~~l~~~~--~~~pr~aKk~LA~EiT~lvHGe~~a~~A~ 320 (418)
||||||+++||||+|||||||+||++|++||++||++|.+||+++++.+ +++||+||+.||+|||++|||++++.+|+
T Consensus 238 n~iwL~~~~tSP~~~yq~~m~i~D~~v~~ylklfT~l~~~eI~~l~~~~~~~~~~r~akk~LA~Evt~lvHG~e~a~~A~ 317 (420)
T 1jil_A 238 GAVWLDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLAEEVTKFIHGEDALNDAI 317 (420)
T ss_dssp SBCBSSTTTSCHHHHHHHHHTCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCGGGCHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred CCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 84350257788399999985188999999999823325888999999886084045678999999999706777789999
Q ss_pred HHHHHHCCCCCCC----------CCCCCEECCHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCE
Q ss_conf 9864310257642----------257710307778216998899999849978868999998769879887980480002
Q gi|254780949|r 321 TAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390 (418)
Q Consensus 321 ~~s~~lF~~~~~~----------~~lp~~~i~~~~i~~~~~l~dlL~~~gL~~SksEARRlI~qGgV~IN~~kI~d~~~~ 390 (418)
++++.+|++.... .++|++.+.. .+++++++|+++|+|+|||||||+|+||||||||++|+|+++.
T Consensus 318 ~~~~~lF~~~~~~~~~~e~~~~~~~iP~~~l~~----~~~~l~dlL~~~gL~~SksEARRLI~qGgV~IN~~ki~D~~~~ 393 (420)
T 1jil_A 318 RISQALFSGDLKSLSAKELKDGFKDVPQVTLSN----DTTNIVEVLIETGISPSKRQAREDVNNGAIYINGERQQDVNYA 393 (420)
T ss_dssp HHHHHHC-------------------------------------------------------------------------
T ss_pred HHHHHHHCCCCCCCCHHHHHHHHCCCCEEEECC----CCCCHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCE
T ss_conf 999998335643468355543331487277157----8878999999849867799999999849989999980485451
Q ss_pred ECHHHHCCCCEEEEEECCEEEEEEEE
Q ss_conf 37777147976999777854899997
Q gi|254780949|r 391 IKLQDFDSTGNIKLSFGKKNHIICHL 416 (418)
Q Consensus 391 i~~~d~~~~~~liLr~GKK~~~lI~i 416 (418)
++.++++++++++||+|||+|++|++
T Consensus 394 l~~~~~~~g~~~iLr~GKK~~~lI~~ 419 (420)
T 1jil_A 394 LAPEDKIDGEFTIIRRGKKKYFMVNY 419 (420)
T ss_dssp --------------------------
T ss_pred ECHHHCCCCCEEEEEECCCCEEEEEE
T ss_conf 27767048978999965874799987