HHsearch results for GI: 254780949 and protein with PDBid: 2g36_A
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; HET: TRP; 2.50A {Thermotoga maritima}
Probab=100.00 E-value=1.7e-40 Score=286.01 Aligned_cols=258 Identities=17% Similarity=0.189 Sum_probs=208.6
Q ss_pred CCEEEEEEECCCCCCCCHHHHHH-HHHHHHHHHCCCEEEEEEECHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 98189998437876202434899-99999999859849999826011144889886210246889999999999999887
Q gi|254780949|r 34 GVVTAYIGYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS 112 (418)
Q Consensus 34 ~~~~~y~G~DpT~~slH~G~l~~-~~~l~~~q~~Gh~~i~liG~~T~~IGDPsgk~~~R~~l~~~~i~~n~~~~~~q~~~ 112 (418)
..+++|.||+|||+ +||||+++ +..+++||++||+++++|||+||++|||++.++.| .+. ++.+..
T Consensus 11 ~~~ri~tG~~PTG~-lHlG~~i~~i~~~~~lq~~g~~~~~~iaD~ha~~~~~~~~~~~~---------~~~---~~~~~~ 77 (340)
T 2g36_A 11 HHMRILSGMRPTGK-LHIGHLVGALENWVKLQEEGNECFYFVADWHALTTHYDDVSKLK---------EYT---RDLVRG 77 (340)
T ss_dssp -CCEEEEEECCCSS-CBHHHHHTHHHHHHHHHHTTCEEEEEECHHHHHHHHTTCCTTHH---------HHH---HHHHHH
T ss_pred CCCEEEECCCCCCC-CHHHHHHHHHHHHHHHHHCCCEEEEEECCHHEECCCCCCHHHHH---------HHH---HHHHHH
T ss_conf 44536656188971-45887899999999999769949999723010148999999999---------999---999999
Q ss_pred HHHCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 65326777640233016752343134688875223447875347888874035688315788989898999999985429
Q gi|254780949|r 113 FIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192 (418)
Q Consensus 113 ~~~~~~~~~~~~i~~N~~W~~~~~~~~~lr~~g~~~~v~~mL~rd~v~~Rl~~~~~is~~EF~Y~llQayD~~~L~~~~~ 192 (418)
++..+-.+....+..+++|.....+..++..+....++++|.....++.|.......+..+|+||+|||+|++++ +
T Consensus 78 ~~a~g~~p~k~~i~~~s~~~~~~~~~~~l~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~YP~lqaaDil~~----~ 153 (340)
T 2g36_A 78 FLACGIDPEKSVIFVQSGVKEHAELALLFSMIVSVSRLERVPTYKEIKSELNYKDLSTAGFLIYPVLQAADILIY----K 153 (340)
T ss_dssp HHHTTCCTTTSEEEEGGGCTHHHHHHHHHHTTSCHHHHHTCHHHHTC-------CCCSHHHHTHHHHHHHHHHTT----T
T ss_pred HHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHC----C
T ss_conf 998268987349997013667788999998520157777534542100001457776534344755531023422----5
Q ss_pred CCEECCCCHHHHHHHHHHHHHHHCCC--------CCEEEEEECEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 70201541258899888999973167--------9717983110236871022354310123334579979999988620
Q gi|254780949|r 193 CRLQMGGSDQWGNIICGIDLGERLKT--------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264 (418)
Q Consensus 193 ~~iqiGGsDQwgNi~~G~eLir~~~~--------~~~~glT~PLLt~~dG~KmgKS~~naIwLd~~~tSPy~fyQf~~n~ 264 (418)
+++..+|.||+.++..+||+.++.+. .+++..+.|+|++++|.|||||.+|+|||+ +||-+...+.++.
T Consensus 154 ~~~v~~G~DQ~~~~~l~R~ia~k~n~~~~~~~~~p~~~~~~~~~l~~~~g~KmSkS~~~~I~l~---D~~~~i~kKI~ka 230 (340)
T 2g36_A 154 AEGVPVGEDQVYHIELTREIARRFNYLYDEVFPEPEAILSRVPKLPGTDGRKMSKSYGNIINLE---ISEKELEQTILRM 230 (340)
T ss_dssp CSEEEECGGGHHHHHHHHHHHHHHHHHSCCCCCCCEEEECCSCCCCCTTSSCCCGGGTCCCBTT---CCHHHHHHHHHTC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEC---CCHHHHHHHHHEE
T ss_conf 7777663778999999999999876520334678631012356789999997888745555202---7657887765510
Q ss_pred ---------------CHHHHHHHHHHHCCCCHHHHHHHHHH---HHCCCCHHHHHHHHHHHHHHHH
Q ss_conf ---------------78889879975068885675554333---2102202688989999997300
Q gi|254780949|r 265 ---------------DDADVVSFAKRLTTLPMSEIDRMAKL---QGKEINEAKKIIATEITTMVHG 312 (418)
Q Consensus 265 ---------------~D~dV~kyLklfT~l~l~EI~~l~~~---~~~~pr~aKk~LA~EiT~lvHG 312 (418)
....+..|+.+| ..+.++++++... .+-++.++|+.||+.+++.+.-
T Consensus 231 ~td~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~dlK~~lae~li~~L~p 295 (340)
T 2g36_A 231 MTDPARVRRSDPGNPENCPVWKYHQAF-DISEEESKWVWEGCTTASIGCVDCKKLLLKNMKRKLAP 295 (340)
T ss_dssp CCCTTCSSTTSCCCGGGCHHHHHHHHT-TCCHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHC-CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 469723404688875200599999860-87377899999865417978899999999999999789