HHsearch results for GI: 254780949 and protein with PDBid: 2ts1_A
>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E* 1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A
Probab=100.00 E-value=0 Score=1085.09 Aligned_cols=409 Identities=37% Similarity=0.617 Sum_probs=386.7
Q ss_pred HHHHHHHHCCCHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECHHHCCCCCCC
Q ss_conf 99999996892002299899999851498189998437876202434899999999998598499998260111448898
Q gi|254780949|r 7 DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86 (418)
Q Consensus 7 ~~~~~L~~Rg~i~~~~~~~~l~~~l~~~~~~~y~G~DpT~~slH~G~l~~~~~l~~~q~~Gh~~i~liG~~T~~IGDPsg 86 (418)
|++++|.+||+++++|++++|+++++++++++||||||||||||+||+||+|+|||||++||+||+|||||||+||||||
T Consensus 2 ~~~~~l~~Rg~i~~~t~~~~l~~~l~~~~~~~y~G~DPTa~sLHlGhlv~l~~l~~fq~~Gh~~i~liGg~T~~IGDPsG 81 (419)
T 2ts1_A 2 DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLATILTMRRFQQAGHRPIALVGGATGLIGDPSG 81 (419)
T ss_dssp HHHHHHHHHTCCSEESCHHHHHHHHHHSCCEEEEEECCSSSSCBGGGHHHHHHHHHHHHTTCEEEEEECTTGGGTCCCTT
T ss_pred CHHHHHHHCCCEEECCCHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCC
T ss_conf 66899997788455089999999861898569993678987530877999999999998699089996454157328999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 86210246889999999999999887653267776402330167523431346888752234478753478888740356
Q gi|254780949|r 87 RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166 (418)
Q Consensus 87 k~~~R~~l~~~~i~~n~~~~~~q~~~~~~~~~~~~~~~i~~N~~W~~~~~~~~~lr~~g~~~~v~~mL~rd~v~~Rl~~~ 166 (418)
|++||++++.++|.+|+++|+.|+.+|+++.+.+++++||||+|||++|+++||||++|+|||||+||+||+|++|++
T Consensus 82 k~~~R~~l~~~~i~~n~~~i~~q~~~~l~~~~~~~~~~iv~N~~W~~~~~~~~~l~~~g~~~~v~~ml~rd~~~~R~~-- 159 (419)
T 2ts1_A 82 KKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIKNNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRIE-- 159 (419)
T ss_dssp CSSCCCCCCHHHHHHHHHHHHHHHTTSSCSSCSSSCCEEEETHHHHTTCCHHHHHHHTGGGCCHHHHHTSHHHHTTTT--
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCC--
T ss_conf 765555689999999999999999887512246887199880785076238999999747740767762056860344--
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHCC-CCCEEEEEECEEECCCCHHHHHHHHCCC
Q ss_conf 883157889898989999999854297020154125889988899997316-7971798311023687102235431012
Q gi|254780949|r 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGAI 245 (418)
Q Consensus 167 ~~is~~EF~Y~llQayD~~~L~~~~~~~iqiGGsDQwgNi~~G~eLir~~~-~~~~~glT~PLLt~~dG~KmgKS~~naI 245 (418)
+|||||||+||+|||||||||+++|+|++|||||||||||++|||||||.. ..++||||+||||++||+|||||++|||
T Consensus 160 ~gis~~Ef~Y~llQayD~~~L~~~~~~~iqiGGsDQ~gNi~~G~dLir~~~g~~~~~glT~PLL~~~dG~K~gKS~~n~i 239 (419)
T 2ts1_A 160 TGISFTEFSYMMLQAYDFLRLYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239 (419)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEEGGGHHHHHHHHHHHHHHHC--CCEEEEECCCCCTTSCCTTCCSSCCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 99677551102120001567776358406883305678998889999863598762488413103888775031179987
Q ss_pred CCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
Q ss_conf 333457997999998862078889879975068885675554333--210220268898999999730000046799986
Q gi|254780949|r 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAA 323 (418)
Q Consensus 246 wLd~~~tSPy~fyQf~~n~~D~dV~kyLklfT~l~l~EI~~l~~~--~~~~pr~aKk~LA~EiT~lvHGe~~a~~A~~~s 323 (418)
|||+++||||+|||||||+||++|++||++||++|++||+++++. .+++||+||+.||+|||++|||+++|++|++++
T Consensus 240 wl~~~~tSPy~~yq~~mni~D~~v~kylklfT~l~~~eI~~l~~~~~~~~~~r~aKk~LA~eit~lvHG~~~a~~A~~~~ 319 (419)
T 2ts1_A 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLAEEVTKLVHGEEALRQAIRIS 319 (419)
T ss_dssp BSSTTTSCHHHHHHHHHTCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHCHHHHHHHHHHC
T ss_pred CCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 34456689799997843787999999999745699999999999874176226899999999999846807789999999
Q ss_pred HHHCCCCCCCCCCCCEEC-----CHHHH-CCCCCHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCEECHHHHC
Q ss_conf 431025764225771030-----77782-169988999998499788689999987698798879804800023777714
Q gi|254780949|r 324 MECFDMSIHSQHMPTISI-----SKDEV-SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397 (418)
Q Consensus 324 ~~lF~~~~~~~~lp~~~i-----~~~~i-~~~~~l~dlL~~~gL~~SksEARRlI~qGgV~IN~~kI~d~~~~i~~~d~~ 397 (418)
+.+|+++..+.+.|++.. +.... ..+++++|+|+++|+|+|||||||+|+||||||||++|+|+++.++.++++
T Consensus 320 ~~lF~~~~~~~~~~e~~~~~~~ip~~~~~~~~i~l~dlL~~~gl~~SksEARRLI~qGgV~INg~kI~D~~~~i~~~~~l 399 (419)
T 2ts1_A 320 EALFSGDIANLTAAEIEQGFKDVPSFVHEGGDVPLVELLVSAGISPSKRQAREDIQNGAIYVNGERLQDVGAILTAEHRL 399 (419)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHCCCCCCCCHHHHHHHHHHCCCHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCCCCHHHCC
T ss_conf 99707877666625666655304401115789769999998599778999999998699898999923832212775604
Q ss_pred CCCEEEEEECCEEEEEEEEC
Q ss_conf 79769997778548999971
Q gi|254780949|r 398 STGNIKLSFGKKNHIICHLC 417 (418)
Q Consensus 398 ~~~~liLr~GKK~~~lI~iv 417 (418)
++++++||+|||+|++|+..
T Consensus 400 ~g~~~lLr~GKK~~~~Ik~a 419 (419)
T 2ts1_A 400 EGRFTVIRRGKKKYYLIRYA 419 (419)
T ss_dssp --------------------
T ss_pred CCCEEEEEECCCCEEEEEEC
T ss_conf 89789999648648999839