HHsearch results for GI: 254780949 and protein with PDBid: 2yy5_A
>2yy5_A Tryptophanyl-tRNA synthetase; aminoaccyl tRNA synthetase, structural genomics, NPPSFA; HET: WSA; 2.55A {Mycoplasma pneumoniae M129}
Probab=99.93 E-value=2.7e-24 Score=179.15 Aligned_cols=250 Identities=16% Similarity=0.191 Sum_probs=161.8
Q ss_pred CEEEEEEECCCCCCCCHHHHHHHHHH-HHHHHCCCEEEEEEECHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 81899984378762024348999999-99998598499998260111448898862102468899999999999998876
Q gi|254780949|r 35 VVTAYIGYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF 113 (418)
Q Consensus 35 ~~~~y~G~DpT~~slH~G~l~~~~~l-~~~q~~Gh~~i~liG~~T~~IGDPsgk~~~R~~l~~~~i~~n~~~~~~q~~~~ 113 (418)
..+||.||.|||. +||||+++++.. ..+|+ |++++++|+|+++++.|+ +.+.+..++.. .+..+
T Consensus 4 ~~rv~tG~~PSG~-~HLGh~i~~i~~~~~lQ~-~~~~~i~IAD~ha~~~~~----------~~~~~~~~~~~---~~~~~ 68 (348)
T 2yy5_A 4 MKRALTGIQASGK-QHLGNYLGVMQSLIELQE-QCQLFVFVADLHSITVDF----------QPQALKQNNFD---LVRTL 68 (348)
T ss_dssp CCEEEEEECCCTT-CBHHHHHHTGGGHHHHHH-HSEEEEEECHHHHTTSCC----------CHHHHHHHHHH---HHHHH
T ss_pred CCEEEECCCCCCC-CHHHHHHHHHHHHHHHHC-CCCEEEEEECHHHHHCCC----------CHHHHHHHHHH---HHHHH
T ss_conf 5604668378970-567769999999999966-698899973187761699----------89999999999---99999
Q ss_pred HHCCCCCCCCEEEEHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHC-------CCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 53267776402330167523431-346888752234478753478888740-------3568831578898989899999
Q gi|254780949|r 114 IKYGTGKTDALMLNNETWLCSIK-YIDLLREIGSFFSVNRMLSFESVRSRL-------KREQSLSFLEFNYMILQAYDFV 185 (418)
Q Consensus 114 ~~~~~~~~~~~i~~N~~W~~~~~-~~~~lr~~g~~~~v~~mL~rd~v~~Rl-------~~~~~is~~EF~Y~llQayD~~ 185 (418)
+..+-.+....+...++ ..... +...+. ...++++|.+.-.++.+. .....++...|+||+|||.|.+
T Consensus 69 la~g~dp~~~~~~~qs~-~~~~~el~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~YP~lQaaDil 144 (348)
T 2yy5_A 69 LAVGLDPQKACLFLQSD-LLEHSMMGYLMM---VQSNLGELQRMTQFKAKKAEQTRNPNGTLNIPTGLLTYPALMAGDIL 144 (348)
T ss_dssp HHTTCCTTTEEEEEGGG-CHHHHHHHHHHH---HHSBHHHHHHCHHHHTTC-----------CCBTHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCCEEEECCC-CCCHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHCCHH
T ss_conf 98178855527973033-500688999983---32788999998876666643002445555643241048167520226
Q ss_pred HHHHHCCCCEECCCCHHHHHHHHHHHHHHHCCC-------CCEEE------EEECEEEC-CCCHHHHHHHHCCCCCCCCC
Q ss_conf 998542970201541258899888999973167-------97179------83110236-87102235431012333457
Q gi|254780949|r 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-------PKLFA------LTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251 (418)
Q Consensus 186 ~L~~~~~~~iqiGGsDQwgNi~~G~eLir~~~~-------~~~~g------lT~PLLt~-~dG~KmgKS~~naIwLd~~~ 251 (418)
++ ++++..||.||.-++...||+.+|++. .+... ...|++.+ .+++|++++.+++|.|+
T Consensus 145 ~~----~~~~vp~G~DQ~~~~~ltRdia~kfn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kS~~~~~s~I~l~--- 217 (348)
T 2yy5_A 145 LY----QPDIVPVGNDQKQHLELTRDLAQRIQKKFKLKLRLPQFVQNKDTNRIMDLFDPTKKMSKSSKNQNGVIYLD--- 217 (348)
T ss_dssp TT----CCSEEECCGGGHHHHHHHHHHHHHHHHHHCCCCCCCEEECCTTTTTCBCSSCTTSBCCSSCSCGGGCCBTT---
T ss_pred HH----CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC---
T ss_conf 41----78878787218999999999987502344544567732123320013567688767776678988668843---
Q ss_pred CCHHHHHHHHHHH-CH---------------HHHHHHHHHHCCCCHHHH--HHH----HHH-HHCCCCHHHHHHHHHHHH
Q ss_conf 9979999988620-78---------------889879975068885675--554----333-210220268898999999
Q gi|254780949|r 252 TSPYNFWQYWRNI-DD---------------ADVVSFAKRLTTLPMSEI--DRM----AKL-QGKEINEAKKIIATEITT 308 (418)
Q Consensus 252 tSPy~fyQf~~n~-~D---------------~dV~kyLklfT~l~l~EI--~~l----~~~-~~~~pr~aKk~LA~EiT~ 308 (418)
++|-+...+.++. .| ..+..++.+|...+..+- ++. +.. .+....++|+.||+.+.+
T Consensus 218 D~~~~I~kKI~ka~td~~~~~~~~~~~~p~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdlK~~lae~l~~ 297 (348)
T 2yy5_A 218 DPKEVVVKKIRQATTDSFNKIRFASKTQPGVTNMLTILKALLKEPVNQSLTNQLGNDLEAYFSTKSYLDLKNALTEATVN 297 (348)
T ss_dssp CCHHHHHHHHHTCCCCSSCCCSCCTTTCHHHHHHHHHHHHHTTSGGGHHHHHHHCSCHHHHGGGCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 87888999887356799888424666788657489899998366034457777656899887677799999999999999
Q ss_pred HH
Q ss_conf 73
Q gi|254780949|r 309 MV 310 (418)
Q Consensus 309 lv 310 (418)
++
T Consensus 298 ~l 299 (348)
T 2yy5_A 298 LL 299 (348)
T ss_dssp HH
T ss_pred HH
T ss_conf 98