HHsearch results for GI: 254780949 and protein with PDBid: 3fnr_A
>3fnr_A Arginyl-tRNA synthetase; transferase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.20A {Campylobacter jejuni}
Probab=95.15 E-value=0.18 Score=28.50 Aligned_cols=69 Identities=22% Similarity=0.222 Sum_probs=44.0
Q ss_pred HHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHCCCCC--EEEEEE---CEEECCCCHHHHHHHHCCCCCCC
Q ss_conf 9999999854297020154125889988899997316797--179831---10236871022354310123334
Q gi|254780949|r 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTS---PLLTTASGTKMGKTLSGAIWLNK 249 (418)
Q Consensus 181 ayD~~~L~~~~~~~iqiGGsDQwgNi~~G~eLir~~~~~~--~~glT~---PLLt~~dG~KmgKS~~naIwLd~ 249 (418)
||-.......++..|-+.|.||-+....-....+..+-.+ ..-... -|+.+..+.|||+..||+|.+++
T Consensus 225 a~~~~k~~~~~d~~I~v~g~dq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~kmS~R~G~~~~l~d 298 (464)
T 3fnr_A 225 VYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFILMSD 298 (464)
T ss_dssp HHHHHHHTSSCSEEEEEEEGGGGGGHHHHHHHHHTTTCCGGGEEEEEECCEEEEETTEECCC---CCSSCBHHH
T ss_pred HHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCHHH
T ss_conf 99999872289728999866046677679999997567755640589888899769802344147888355999