HHsearch results for GI: 254780949 and protein with PDBid: 3hv0_A

>3hv0_A Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, ligase, nucleotide-binding; HET: TRP; 2.42A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=0  Score=344.82  Aligned_cols=284  Identities=16%  Similarity=0.169  Sum_probs=225.5

Q ss_pred             HHHCCCHHHCCCHHHHHH-HHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECHHHCCCCCCCCCCC
Q ss_conf             996892002299899999-8514981899984378762024348999999999985984999982601114488988621
Q gi|254780949|r   12 LSERGFIHQISNPRELDI-LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES   90 (418)
Q Consensus        12 L~~Rg~i~~~~~~~~l~~-~l~~~~~~~y~G~DpT~~slH~G~l~~~~~l~~~q~~Gh~~i~liG~~T~~IGDPsgk~~~   90 (418)
                      +..||++-+-.+.+.+-+ +-++++..+|+||||||+||||||+++++.+++||++||.++++      +|+|+. +-..
T Consensus        50 ~~rRg~~f~hrd~d~il~~~~~gk~~~vytG~~PSg~~lHlGh~v~~~~~~~~q~~~~~~v~i------~iaD~~-~~~~  122 (393)
T 3hv0_A           50 FFRRNIFLSHRDFEKILDVYEKGELFYLYTGRGPSSESLHVGHLVPFLFTKYLQDTFKVPLVI------QLTDDE-KFIF  122 (393)
T ss_dssp             HHHTTSEEEEESHHHHHHHHHTTCCCEEEEEECCSSSSCBSTTHHHHHHHHHHHHHHCCCEEE------EECHHH-HHHH
T ss_pred             HHHCCEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEE------EEECHH-HHCC
T ss_conf             563352441377999999998299838995706898433499999999999998766987799------984566-5205


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             02468899999999999998876532677764023301675234313468887522344787534788887403568831
Q gi|254780949|r   91 RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS  170 (418)
Q Consensus        91 R~~l~~~~i~~n~~~~~~q~~~~~~~~~~~~~~~i~~N~~W~~~~~~~~~lr~~g~~~~v~~mL~rd~v~~Rl~~~~~is  170 (418)
                      |+.++.++++.|+..+..++-.   .+-++.++.+++|++|+..+. ...       +.+++|.+...+++++..+.+++
T Consensus       123 ~~~~~~~e~~~~~~~~~~~~iA---~G~dp~kt~i~~~s~~~~~~~-~~~-------~~l~~~~t~~~~k~~~~~~~~~~  191 (393)
T 3hv0_A          123 KSNLTLEETHNYAYENMKDIIA---CGFDPELTFIFTNLEYIAELY-PDI-------LRIEKKISCSQIKSIFGFKDSCN  191 (393)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHT---TCCCTTTEEEEEHHHHHHHHH-HHH-------HHHHHHSBHHHHHHHHCCCTTSB
T ss_pred             CCCCCHHHHHHHHHHHHHHHHH---CCCCCCCEEEEECCHHHHHHH-HHH-------HHHHCCCCHHHHHHHHCCCCCCC
T ss_conf             6789999999999999999997---188976439997848988899-999-------99938573788987744677776


Q ss_pred             HHHHHHHHHHHHHHHHHHH-------HCCCCEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECEEECCCCH--HHHHHH
Q ss_conf             5788989898999999985-------4297020154125889988899997316797179831102368710--223543
Q gi|254780949|r  171 FLEFNYMILQAYDFVELAK-------NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT--KMGKTL  241 (418)
Q Consensus       171 ~~EF~Y~llQayD~~~L~~-------~~~~~iqiGGsDQwgNi~~G~eLir~~~~~~~~glT~PLLt~~dG~--KmgKS~  241 (418)
                      ++||+||+|||||+++++.       ++.|+++.+|+|||+||..|||+++|++..+...++.|++++.+|.  |||||.
T Consensus       192 ~g~~~YP~lQaaDil~~~~d~~~g~~~~~~~lvPvG~DQ~~hi~ltRdia~r~~~~~~~~~~~~~lp~L~G~~~KMSsS~  271 (393)
T 3hv0_A          192 VGKFAFPAVQAAPAFSSSFPHIFGGRTDIHCLVPHAIDQDPYFRMVRDVAPRLGYLKPSSIHSIFLPSLQGSQTKMSASV  271 (393)
T ss_dssp             HHHHHHHHHHHGGGSGGGCHHHHTTCSCCCEEEEEEGGGHHHHHHHHHHTGGGTCCCCEEEEECCCCC------------
T ss_pred             CCCCCCCHHHHCHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCC
T ss_conf             64324533430003430544651676667662504564899999999999983666763002554444678666666788


Q ss_pred             -HCCCCCCCCCCCHHHHHHHHHHH-------------------CHHHHHHHHHHHCCCCHHHHHHHHHHH---HCCCCHH
Q ss_conf             -10123334579979999988620-------------------788898799750688856755543332---1022026
Q gi|254780949|r  242 -SGAIWLNKEMTSPYNFWQYWRNI-------------------DDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEINEA  298 (418)
Q Consensus       242 -~naIwLd~~~tSPy~fyQf~~n~-------------------~D~dV~kyLklfT~l~l~EI~~l~~~~---~~~pr~a  298 (418)
                       +++|||+   +||.+++.++++.                   ++..+..|+++|.. +.++++++.+.-   +-.+.++
T Consensus       272 ~~s~I~L~---D~~~~i~~KI~k~~~~~g~~t~~e~~~~~g~~~~~~~~~~l~~~~~-dd~~l~ei~~~y~~G~l~~gd~  347 (393)
T 3hv0_A          272 QNSSIFVN---DNEESIRNKIMKYAFSGGQATEEEQRRLGANLDVDVSWQYLRFLME-DDEKLEEIGKKYSSGEMLSGEI  347 (393)
T ss_dssp             -CCCCBTT---CCHHHHHHHHHHHSCCCSCSSSCCC---CCCTTTCHHHHHHHHHCC-CHHHHHHHHHHHHHTSSCHHHH
T ss_pred             CCCCEECC---CCHHHHHHHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CHHHHHHHHHHHHCCCCCHHHH
T ss_conf             43201345---9868999987236517876645662125788047679999998669-8889999999997699899999


Q ss_pred             HHHHHHHHHHHHHHHCHHH
Q ss_conf             8898999999730000046
Q gi|254780949|r  299 KKIIATEITTMVHGREEAE  317 (418)
Q Consensus       299 Kk~LA~EiT~lvHGe~~a~  317 (418)
                      |+.||+++++++|+-.+..
T Consensus       348 K~~lae~i~~~l~~~rekr  366 (393)
T 3hv0_A          348 KSILVQELVKLTKNHQKNR  366 (393)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999978999999