HHsearch results for GI: 254780949 and protein with PDBid: 3hzr_A
>3hzr_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, structural genomics, medical structural genomics of pathogenic protozoa, MSGPP; 3.00A {Entamoeba histolytica}
Probab=100.00 E-value=1.8e-41 Score=292.38 Aligned_cols=284 Identities=10% Similarity=0.054 Sum_probs=222.3
Q ss_pred HHHCCCHHHCCCHHH-HHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHC-CCEEEEEEECHHHCCCCCCCCCC
Q ss_conf 996892002299899-9998514981899984378762024348999999999985-98499998260111448898862
Q gi|254780949|r 12 LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT-GHKPISLMGGGTSIIGDPSFRDE 89 (418)
Q Consensus 12 L~~Rg~i~~~~~~~~-l~~~l~~~~~~~y~G~DpT~~slH~G~l~~~~~l~~~q~~-Gh~~i~liG~~T~~IGDPsgk~~ 89 (418)
+..||++-.--+-+. |+..-++++..+|.|++|||+ +||||+++++.+++||+. |+.++++|+|+++...+
T Consensus 58 ~~rRgi~f~hrDld~il~~~~~gk~~~vytG~~PSG~-lHLGh~i~~~~~k~lQ~~~~~~v~I~iaD~~a~~~~------ 130 (386)
T 3hzr_A 58 YLSRGVFLAEKSLDKFLDDVEAKKPTFIFIQKYPQKE-VALEEYITLEFARYLQDAFNIQVIIQILDDIKVLNR------ 130 (386)
T ss_dssp HHHTTSEEEESSHHHHHHHHHTTCCEEEEEEECCCSS-CBGGGHHHHHHHHHHHHHHCCEEEEEECHHHHHHTT------
T ss_pred HEECCEEEECCCHHHHHHHHHCCCCEEEEECCCCCCH-HHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHCCC------
T ss_conf 0034455432679999999974998489948688737-089899999999999976797599997447872478------
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 10246889999999999999887653267776402330167523431346888752234478753478888740356883
Q gi|254780949|r 90 SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169 (418)
Q Consensus 90 ~R~~l~~~~i~~n~~~~~~q~~~~~~~~~~~~~~~i~~N~~W~~~~~~~~~lr~~g~~~~v~~mL~rd~v~~Rl~~~~~i 169 (418)
.++.+++.+|+..+..+ ++..+-++.++.|++|++|+..+.. .++ .++++.|+++|. .++..+...
T Consensus 131 ---~~~~ee~~~~~~e~~~~---~lA~G~DpeKt~i~~qs~~~~~~~~-~~~-~l~k~~t~~~~k------~~~~~~~~~ 196 (386)
T 3hzr_A 131 ---EATINEASKMSNDLMKY---ILAFGFNEDKTFIYTDYQYFGKMYR-TIS-LVEKATAYNVVQ------PFFNFEYSD 196 (386)
T ss_dssp ---SCCHHHHHHHHHHHHHH---HHHTCCCGGGEEEEEHHHHHHHHHH-HHH-HHHHHCBHHHHT------TTSCCCSSS
T ss_pred ---CCCHHHHHHHHHHHHHH---HHHHCCCCCCEEEEEECHHCHHHHH-HHH-HHHCCCCCCHHH------HHHCCCCCC
T ss_conf ---89999999999999999---9995889472289982520006589-999-995873505254------651676667
Q ss_pred CHHHHHHHHHHHHHHHHHHHH-----CCCCEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECEEECCCC-HHHHHHH-H
Q ss_conf 157889898989999999854-----29702015412588998889999731679717983110236871-0223543-1
Q gi|254780949|r 170 SFLEFNYMILQAYDFVELAKN-----YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTL-S 242 (418)
Q Consensus 170 s~~EF~Y~llQayD~~~L~~~-----~~~~iqiGGsDQwgNi~~G~eLir~~~~~~~~glT~PLLt~~dG-~KmgKS~-~ 242 (418)
++.+|+||+|||+|++++..+ ..+.+..+|.|||.|+..+||+.+|++..+...+..|++++.+| .|||||. +
T Consensus 197 n~g~~~YP~lQaaDil~~~~~~~~g~~~~~lVPvG~DQ~~~~~ltRdia~r~~~~~p~~i~~~~lpgL~G~~KMSsS~~~ 276 (386)
T 3hzr_A 197 NIGKLASPSIMTASMFSQSYSHFFSSPARCLVLDSIKNVQFHSIIDQIATTLNFIQPTVLFHKMVPLLSGVTKFDIPSDH 276 (386)
T ss_dssp BHHHHHHHHHHHHTTSGGGCTTTCSSCCEEEEEEEGGGHHHHHHHHHHHHHHTCCCCEEEEECCCCCTTCTTCCCCCCTT
T ss_pred CCCCCCCCHHHHHHHHHCCCHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 77520460988888876068054178753030577345999999999998635688702125544567887654568998
Q ss_pred CCCCCCC----------------CCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHH-H--CCCCHHHHHHH
Q ss_conf 0123334----------------579979999988620788898799750688856755543332-1--02202688989
Q gi|254780949|r 243 GAIWLNK----------------EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ-G--KEINEAKKIIA 303 (418)
Q Consensus 243 naIwLd~----------------~~tSPy~fyQf~~n~~D~dV~kyLklfT~l~l~EI~~l~~~~-~--~~pr~aKk~LA 303 (418)
++|||+. .+.++++..+++-|.++..+..||++|+. +-+|++++.+.- + -++.++|+.||
T Consensus 277 s~I~L~D~p~~I~kKI~k~a~sgg~~t~ee~~~~gg~p~~~~v~~~l~~f~~-dd~eleei~~~y~~G~l~~gelK~~la 355 (386)
T 3hzr_A 277 NSILLSDNAKQVERKINKLAFSGGRNTTEEHKKLGGQCDIDVSFQLLNIFSS-DNAQVKDVEEKYSKGELLSGELKKIVS 355 (386)
T ss_dssp TSCBTTCCHHHHHHHHHHTSCCCCCSSHHHHHTTCCCGGGCHHHHHHHHHCS-CHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEEECCHHHHHHHHHEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHCC-CHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 6257507989998874525327987750333314999752489999998648-876999999999659989899999999
Q ss_pred HHHHHHHHHHCHHH
Q ss_conf 99999730000046
Q gi|254780949|r 304 TEITTMVHGREEAE 317 (418)
Q Consensus 304 ~EiT~lvHGe~~a~ 317 (418)
++|+++++...+..
T Consensus 356 e~i~~~l~~~qerr 369 (386)
T 3hzr_A 356 ASMKDFIVAYDAKK 369 (386)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999999